Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
10:02:50 (2784348): wrapper (7.7.26015): starting
10:02:50 (2784348): wrapper: running run_atlas (--nthreads 4)
[2025-04-19 10:02:50] Arguments: --nthreads 4
[2025-04-19 10:02:50] Threads: 4
[2025-04-19 10:02:50] Checking for CVMFS
[2025-04-19 10:02:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-19 10:02:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-19 10:02:50] Running cvmfs_config stat atlas.cern.ch
[2025-04-19 10:02:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-19 10:02:50] 2.12.7.0 84362 15412 58760 145030 1 56 4873186 6144001 1832 130560 0 31492599 99.982 3576689 6733 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.42:3128 1
[2025-04-19 10:02:50] CVMFS is ok
[2025-04-19 10:02:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-19 10:02:50] Checking for apptainer binary...
[2025-04-19 10:02:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-19 10:02:50] Running /usr/bin/apptainer --version
[2025-04-19 10:02:50] apptainer version 1.4.0
[2025-04-19 10:02:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-19 10:02:50] Ryzen8
[2025-04-19 10:02:50] apptainer works
[2025-04-19 10:02:50] Set ATHENA_PROC_NUMBER=4
[2025-04-19 10:02:50] Set ATHENA_CORE_NUMBER=4
[2025-04-19 10:02:50] Starting ATLAS job with PandaID=6606240601
[2025-04-19 10:02:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-19 11:28:38]  *** The last 200 lines of the pilot log: ***
[2025-04-19 11:28:38]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-04-19 11:28:38]  is_altstaged=None
[2025-04-19 11:28:38]  is_tar=False
[2025-04-19 11:28:38]  lfn=log.44075483._066386.job.log.tgz.1
[2025-04-19 11:28:38]  mtime=0
[2025-04-19 11:28:38]  protocol_id=None
[2025-04-19 11:28:38]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-19 11:28:38]  replicas=None
[2025-04-19 11:28:38]  scope=mc23_13p6TeV
[2025-04-19 11:28:38]  status=None
[2025-04-19 11:28:38]  status_code=0
[2025-04-19 11:28:38]  storage_token=
[2025-04-19 11:28:38]  surl=/var/lib/boinc/slots/0/PanDA_Pilot-6606240601/log.44075483._066386.job.log.tgz.1
[2025-04-19 11:28:38]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/17/0a/log.44075483._066386.job.log.tgz.1
[2025-04-19 11:28:38]  workdir=None
[2025-04-19 11:28:38] ]
[2025-04-19 11:28:38] 2025-04-19 09:28:17,904 | INFO     | transferring file log.44075483._066386.job.log.tgz.1 from /var/lib/boinc/slots/0/PanDA_Pilot-6606240601/log.44075483._066386.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-04-19 11:28:38] 2025-04-19 09:28:17,904 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-6606240601/log.44075483._066386.job.log.tgz.1 /var/lib/boinc/slots/0/log.44075483._066386.job
[2025-04-19 11:28:38] 2025-04-19 09:28:17,913 | INFO     | adding to output.list: log.44075483._066386.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/17/0a/log.44075483._066386.job.log.tg
[2025-04-19 11:28:38] 2025-04-19 09:28:17,914 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-19 11:28:38] 2025-04-19 09:28:17,914 | INFO     | summary of transferred files:
[2025-04-19 11:28:38] 2025-04-19 09:28:17,914 | INFO     |  -- lfn=log.44075483._066386.job.log.tgz.1, status_code=0, status=transferred
[2025-04-19 11:28:38] 2025-04-19 09:28:17,914 | INFO     | stage-out finished correctly
[2025-04-19 11:28:38] 2025-04-19 09:28:18,058 | INFO     | monitor loop #390: job 0:6606240601 is in state 'finished'
[2025-04-19 11:28:38] 2025-04-19 09:28:18,058 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 11:28:38] 2025-04-19 09:28:20,561 | INFO     | monitor loop #391: job 0:6606240601 is in state 'finished'
[2025-04-19 11:28:38] 2025-04-19 09:28:20,561 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 11:28:38] 2025-04-19 09:28:20,805 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-19 11:28:38] 2025-04-19 09:28:22,113 | INFO     | job 6606240601 has state=finished
[2025-04-19 11:28:38] 2025-04-19 09:28:22,114 | INFO     | preparing for final server update for job 6606240601 in state='finished'
[2025-04-19 11:28:38] 2025-04-19 09:28:22,114 | INFO     | this job has now completed (state=finished)
[2025-04-19 11:28:38] 2025-04-19 09:28:22,114 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-19 11:28:38] 2025-04-19 09:28:22,114 | INFO     | log transfer has been attempted: DONE
[2025-04-19 11:28:38] 2025-04-19 09:28:22,114 | INFO     | job 6606240601 has finished - writing final server update
[2025-04-19 11:28:38] 2025-04-19 09:28:22,114 | INFO     | total number of processed events: 400 (read)
[2025-04-19 11:28:38] 2025-04-19 09:28:22,115 | INFO     | executing command: lscpu
[2025-04-19 11:28:38] 2025-04-19 09:28:22,128 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-19 11:28:38] 2025-04-19 09:28:23,064 | INFO     | monitor loop #392: job 0:6606240601 is in state 'finished'
[2025-04-19 11:28:38] 2025-04-19 09:28:23,064 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 11:28:38] 2025-04-19 09:28:23,737 | INFO     | CPU arch script returned: x86-64-v4
[2025-04-19 11:28:38] 2025-04-19 09:28:23,737 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6606240601/memory_monitor_summary.json (trf name=prmon)
[2025-04-19 11:28:38] 2025-04-19 09:28:23,737 | INFO     | extracted standard info from prmon json
[2025-04-19 11:28:38] 2025-04-19 09:28:23,737 | INFO     | extracted standard memory fields from prmon json
[2025-04-19 11:28:38] 2025-04-19 09:28:23,737 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-19 11:28:38] 2025-04-19 09:28:23,737 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-19 11:28:38] 2025-04-19 09:28:23,738 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-19 11:28:38] 2025-04-19 09:28:23,738 | INFO     | fitting pss+swap vs Time
[2025-04-19 11:28:38] 2025-04-19 09:28:23,739 | INFO     | sum of square deviations: 141539398.0
[2025-04-19 11:28:38] 2025-04-19 09:28:23,739 | INFO     | sum of deviations: -7740326051.0
[2025-04-19 11:28:38] 2025-04-19 09:28:23,739 | INFO     | mean x: 1745052415.0
[2025-04-19 11:28:38] 2025-04-19 09:28:23,739 | INFO     | mean y: 2413075.038961039
[2025-04-19 11:28:38] 2025-04-19 09:28:23,739 | INFO     | -- intersect: 95433613567.95728
[2025-04-19 11:28:38] 2025-04-19 09:28:23,739 | INFO     | intersect: 95433613567.95728
[2025-04-19 11:28:38] 2025-04-19 09:28:23,739 | INFO     | chi2: 0.11894568382007892
[2025-04-19 11:28:38] 2025-04-19 09:28:23,739 | INFO     | -- intersect: 95433613567.95728
[2025-04-19 11:28:38] 2025-04-19 09:28:23,739 | INFO     | current memory leak: -54.69 B/s (using 77 data points, chi2=0.12)
[2025-04-19 11:28:38] 2025-04-19 09:28:23,739 | INFO     | ..............................
[2025-04-19 11:28:38] 2025-04-19 09:28:23,739 | INFO     | . Timing measurements:
[2025-04-19 11:28:38] 2025-04-19 09:28:23,739 | INFO     | . get job = 0 s
[2025-04-19 11:28:38] 2025-04-19 09:28:23,739 | INFO     | . initial setup = 1 s
[2025-04-19 11:28:38] 2025-04-19 09:28:23,739 | INFO     | . payload setup = 2 s
[2025-04-19 11:28:38] 2025-04-19 09:28:23,739 | INFO     | . stage-in = 0 s
[2025-04-19 11:28:38] 2025-04-19 09:28:23,739 | INFO     | . payload execution = 5104 s
[2025-04-19 11:28:38] 2025-04-19 09:28:23,739 | INFO     | . stage-out = 0 s
[2025-04-19 11:28:38] 2025-04-19 09:28:23,739 | INFO     | . log creation = 0 s
[2025-04-19 11:28:38] 2025-04-19 09:28:23,739 | INFO     | ..............................
[2025-04-19 11:28:38] 2025-04-19 09:28:23,930 | INFO     | 
[2025-04-19 11:28:38] 2025-04-19 09:28:23,930 | INFO     | job summary report
[2025-04-19 11:28:38] 2025-04-19 09:28:23,930 | INFO     | --------------------------------------------------
[2025-04-19 11:28:38] 2025-04-19 09:28:23,930 | INFO     | PanDA job id: 6606240601
[2025-04-19 11:28:38] 2025-04-19 09:28:23,931 | INFO     | task id: 44075483
[2025-04-19 11:28:38] 2025-04-19 09:28:23,931 | INFO     | errors: (none)
[2025-04-19 11:28:38] 2025-04-19 09:28:23,931 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-19 11:28:38] 2025-04-19 09:28:23,931 | INFO     | pilot state: finished 
[2025-04-19 11:28:38] 2025-04-19 09:28:23,931 | INFO     | transexitcode: 0
[2025-04-19 11:28:38] 2025-04-19 09:28:23,931 | INFO     | exeerrorcode: 0
[2025-04-19 11:28:38] 2025-04-19 09:28:23,931 | INFO     | exeerrordiag: 
[2025-04-19 11:28:38] 2025-04-19 09:28:23,931 | INFO     | exitcode: 0
[2025-04-19 11:28:38] 2025-04-19 09:28:23,931 | INFO     | exitmsg: OK
[2025-04-19 11:28:38] 2025-04-19 09:28:23,931 | INFO     | cpuconsumptiontime: 19068 s
[2025-04-19 11:28:38] 2025-04-19 09:28:23,931 | INFO     | nevents: 400
[2025-04-19 11:28:38] 2025-04-19 09:28:23,931 | INFO     | neventsw: 0
[2025-04-19 11:28:38] 2025-04-19 09:28:23,931 | INFO     | pid: 2794413
[2025-04-19 11:28:38] 2025-04-19 09:28:23,931 | INFO     | pgrp: 2794413
[2025-04-19 11:28:38] 2025-04-19 09:28:23,931 | INFO     | corecount: 4
[2025-04-19 11:28:38] 2025-04-19 09:28:23,931 | INFO     | event service: False
[2025-04-19 11:28:38] 2025-04-19 09:28:23,931 | INFO     | sizes: {0: 2426823, 2: 2427029, 11: 2427057, 5110: 2453399, 5111: 2462340, 5114: 2462396, 5117: 2462694}
[2025-04-19 11:28:38] 2025-04-19 09:28:23,931 | INFO     | --------------------------------------------------
[2025-04-19 11:28:38] 2025-04-19 09:28:23,931 | INFO     | 
[2025-04-19 11:28:38] 2025-04-19 09:28:23,931 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-04-19 11:28:38] 2025-04-19 09:28:23,942 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-19 11:28:38] 2025-04-19 09:28:23,942 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-19 11:28:38] 2025-04-19 09:28:23,942 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-19 11:28:38] 2025-04-19 09:28:23,942 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-19 11:28:38] 2025-04-19 09:28:23,942 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-19 11:28:38] 2025-04-19 09:28:23,942 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-19 11:28:38] 2025-04-19 09:28:23,942 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-19 11:28:38] 2025-04-19 09:28:23,942 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-19 11:28:38] 2025-04-19 09:28:23,942 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-19 11:28:38] 2025-04-19 09:28:23,942 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-19 11:28:38] 2025-04-19 09:28:23,942 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-19 11:28:38] 2025-04-19 09:28:23,942 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-19 11:28:38] 2025-04-19 09:28:23,942 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-19 11:28:38] 2025-04-19 09:28:23,942 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-19 11:28:38] 2025-04-19 09:28:23,942 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-19 11:28:38] 2025-04-19 09:28:23,942 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-19 11:28:38] 2025-04-19 09:28:23,942 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-19 11:28:38] 2025-04-19 09:28:23,942 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-19 11:28:38] 2025-04-19 09:28:23,942 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-19 11:28:38] 2025-04-19 09:28:23,942 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-19 11:28:38] 2025-04-19 09:28:23,943 | INFO     | job 6606240601 has completed (purged errors)
[2025-04-19 11:28:38] 2025-04-19 09:28:23,943 | INFO     | overall cleanup function is called
[2025-04-19 11:28:38] 2025-04-19 09:28:24,949 | INFO     | --- collectZombieJob: --- 10, [2794413]
[2025-04-19 11:28:38] 2025-04-19 09:28:24,949 | INFO     | zombie collector waiting for pid 2794413
[2025-04-19 11:28:38] 2025-04-19 09:28:24,949 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-19 11:28:38] 2025-04-19 09:28:24,949 | INFO     | collected zombie processes
[2025-04-19 11:28:38] 2025-04-19 09:28:24,949 | INFO     | will attempt to kill all subprocesses of pid=2794413
[2025-04-19 11:28:38] 2025-04-19 09:28:24,995 | INFO     | process IDs to be killed: [2794413] (in reverse order)
[2025-04-19 11:28:38] 2025-04-19 09:28:25,020 | WARNING  | found no corresponding commands to process id(s)
[2025-04-19 11:28:38] 2025-04-19 09:28:25,021 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-19 11:28:38] 2025-04-19 09:28:25,023 | INFO     | did not find any defunct processes belonging to 2794413
[2025-04-19 11:28:38] 2025-04-19 09:28:25,024 | INFO     | did not find any defunct processes belonging to 2794413
[2025-04-19 11:28:38] 2025-04-19 09:28:25,024 | INFO     | ready for new job
[2025-04-19 11:28:38] 2025-04-19 09:28:25,024 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-19 11:28:38] 2025-04-19 09:28:25,025 | INFO     | **************************************
[2025-04-19 11:28:38] 2025-04-19 09:28:25,025 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-19 11:28:38] 2025-04-19 09:28:25,025 | INFO     | **************************************
[2025-04-19 11:28:38] 2025-04-19 09:28:25,025 | INFO     | 
[2025-04-19 11:28:38] 2025-04-19 09:28:25,025 | INFO     | architecture information:
[2025-04-19 11:28:38] 2025-04-19 09:28:25,025 | INFO     | executing command: cat /etc/os-release
[2025-04-19 11:28:38] 2025-04-19 09:28:25,034 | INFO     | cat /etc/os-release:
[2025-04-19 11:28:38] NAME="CentOS Linux"
[2025-04-19 11:28:38] VERSION="7 (Core)"
[2025-04-19 11:28:38] ID="centos"
[2025-04-19 11:28:38] ID_LIKE="rhel fedora"
[2025-04-19 11:28:38] VERSION_ID="7"
[2025-04-19 11:28:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-19 11:28:38] ANSI_COLOR="0;31"
[2025-04-19 11:28:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-19 11:28:38] HOME_URL="https://www.centos.org/"
[2025-04-19 11:28:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-19 11:28:38] 
[2025-04-19 11:28:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-19 11:28:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-19 11:28:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-19 11:28:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-19 11:28:38] 
[2025-04-19 11:28:38] 2025-04-19 09:28:25,034 | INFO     | **************************************
[2025-04-19 11:28:38] 2025-04-19 09:28:25,537 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-04-19 11:28:38] 2025-04-19 09:28:25,545 | INFO     | sufficient remaining disk space (87243620352 B)
[2025-04-19 11:28:38] 2025-04-19 09:28:25,545 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-19 11:28:38] 2025-04-19 09:28:25,546 | INFO     | current server update state: UPDATING_FINAL
[2025-04-19 11:28:38] 2025-04-19 09:28:25,546 | INFO     | update_server=False
[2025-04-19 11:28:38] 2025-04-19 09:28:25,546 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-19 11:28:38] 2025-04-19 09:28:25,546 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-19 11:28:38] 2025-04-19 09:28:25,567 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-04-19 11:28:38] 2025-04-19 09:28:25,567 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-04-19 11:28:38] 2025-04-19 09:28:25,567 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-19 11:28:38] 2025-04-19 09:28:25,567 | INFO     | will abort loop
[2025-04-19 11:28:38] 2025-04-19 09:28:25,664 | INFO     | found 0 job(s) in 20 queues
[2025-04-19 11:28:38] 2025-04-19 09:28:25,664 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-19 11:28:38] 2025-04-19 09:28:25,664 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-19 11:28:38] 2025-04-19 09:28:25,732 | INFO     | all job control threads have been joined
[2025-04-19 11:28:38] 2025-04-19 09:28:25,969 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-19 11:28:38] 2025-04-19 09:28:26,073 | INFO     | all data control threads have been joined
[2025-04-19 11:28:38] 2025-04-19 09:28:26,548 | INFO     | [job] retrieve thread has finished
[2025-04-19 11:28:38] 2025-04-19 09:28:26,551 | INFO     | [job] queue monitor thread has finished
[2025-04-19 11:28:38] 2025-04-19 09:28:26,571 | INFO     | [job] job monitor thread has finished
[2025-04-19 11:28:38] 2025-04-19 09:28:26,574 | INFO     | all payload control threads have been joined
[2025-04-19 11:28:38] 2025-04-19 09:28:26,708 | INFO     | [job] create_data_payload thread has finished
[2025-04-19 11:28:38] 2025-04-19 09:28:26,728 | INFO     | [payload] validate_pre thread has finished
[2025-04-19 11:28:38] 2025-04-19 09:28:26,737 | INFO     | [job] control thread has finished
[2025-04-19 11:28:38] 2025-04-19 09:28:26,761 | INFO     | [payload] failed_post thread has finished
[2025-04-19 11:28:38] 2025-04-19 09:28:26,857 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-19 11:28:38] 2025-04-19 09:28:26,931 | INFO     | [data] copytool_in thread has finished
[2025-04-19 11:28:38] 2025-04-19 09:28:27,078 | INFO     | [data] control thread has finished
[2025-04-19 11:28:38] 2025-04-19 09:28:27,471 | INFO     | [payload] execute_payloads thread has finished
[2025-04-19 11:28:38] 2025-04-19 09:28:27,577 | INFO     | [payload] control thread has finished
[2025-04-19 11:28:38] 2025-04-19 09:28:27,865 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-19 11:28:38] 2025-04-19 09:28:27,974 | INFO     | [data] copytool_out thread has finished
[2025-04-19 11:28:38] 2025-04-19 09:28:28,014 | INFO     | [job] validate thread has finished
[2025-04-19 11:28:38] 2025-04-19 09:28:28,111 | INFO     | [payload] validate_post thread has finished
[2025-04-19 11:28:38] 2025-04-19 09:28:30,863 | INFO     | [data] queue_monitor thread has finished
[2025-04-19 11:28:38] 2025-04-19 09:28:32,894 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 131635085285184)>', '<ExcThread(monitor, started 131634724574976)>']
[2025-04-19 11:28:38] 2025-04-19 09:28:33,701 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-19 11:28:38] 2025-04-19 09:28:33,701 | INFO     | [monitor] control thread has ended
[2025-04-19 11:28:38] 2025-04-19 09:28:37,918 | INFO     | all workflow threads have been joined
[2025-04-19 11:28:38] 2025-04-19 09:28:37,918 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-19 11:28:38] 2025-04-19 09:28:37,918 | INFO     | traces error code: 0
[2025-04-19 11:28:38] 2025-04-19 09:28:37,918 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-19 11:28:38] 2025-04-19 09:28:37,979 [wrapper] ==== pilot stdout END ====
[2025-04-19 11:28:38] 2025-04-19 09:28:37,980 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-19 11:28:38] 2025-04-19 09:28:37,982 [wrapper] pilotpid: 2787987
[2025-04-19 11:28:38] 2025-04-19 09:28:37,983 [wrapper] Pilot exit status: 0
[2025-04-19 11:28:38] 2025-04-19 09:28:37,987 [wrapper] pandaids: 6606240601
[2025-04-19 11:28:38] 2025-04-19 09:28:38,003 [wrapper] cleanup supervisor_pilot 2850685 2787988
[2025-04-19 11:28:38] 2025-04-19 09:28:38,004 [wrapper] Test setup, not cleaning
[2025-04-19 11:28:38] 2025-04-19 09:28:38,005 [wrapper] apfmon messages muted
[2025-04-19 11:28:38] 2025-04-19 09:28:38,006 [wrapper] ==== wrapper stdout END ====
[2025-04-19 11:28:38] 2025-04-19 09:28:38,008 [wrapper] ==== wrapper stderr END ====
[2025-04-19 11:28:38]  *** Error codes and diagnostics ***
[2025-04-19 11:28:38]     "exeErrorCode": 0,
[2025-04-19 11:28:38]     "exeErrorDiag": "",
[2025-04-19 11:28:38]     "pilotErrorCode": 0,
[2025-04-19 11:28:38]     "pilotErrorDiag": "",
[2025-04-19 11:28:38]  *** Listing of results directory ***
[2025-04-19 11:28:38] insgesamt 416936
[2025-04-19 11:28:38] -rw-r--r-- 1 boinc boinc    495897 18. Apr 09:46 pilot3.tar.gz
[2025-04-19 11:28:38] -rw-r--r-- 1 boinc boinc      5111 18. Apr 09:52 queuedata.json
[2025-04-19 11:28:38] -rwx------ 1 boinc boinc     37140 18. Apr 09:53 runpilot2-wrapper.sh
[2025-04-19 11:28:38] -rw-r--r-- 1 boinc boinc       100 19. Apr 10:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-19 11:28:38] -rwxr-xr-x 1 boinc boinc      7986 19. Apr 10:02 run_atlas
[2025-04-19 11:28:38] -rw-r--r-- 1 boinc boinc       105 19. Apr 10:02 job.xml
[2025-04-19 11:28:38] -rw-r--r-- 2 boinc boinc     17569 19. Apr 10:02 start_atlas.sh
[2025-04-19 11:28:38] drwxrwx--x 2 boinc boinc      4096 19. Apr 10:02 shared
[2025-04-19 11:28:38] -rw-r--r-- 2 boinc boinc    508893 19. Apr 10:02 input.tar.gz
[2025-04-19 11:28:38] -rw-r--r-- 1 boinc boinc      9581 19. Apr 10:02 init_data.xml
[2025-04-19 11:28:38] -rw-r--r-- 2 boinc boinc 222985889 19. Apr 10:02 EVNT.44075481._002580.pool.root.1
[2025-04-19 11:28:38] -rw-r--r-- 1 boinc boinc         0 19. Apr 10:02 boinc_lockfile
[2025-04-19 11:28:38] -rw-r--r-- 1 boinc boinc      2578 19. Apr 10:02 pandaJob.out
[2025-04-19 11:28:38] -rw------- 1 boinc boinc       461 19. Apr 10:02 setup.sh.local
[2025-04-19 11:28:38] -rw------- 1 boinc boinc    991300 19. Apr 10:02 agis_schedconf.cvmfs.json
[2025-04-19 11:28:38] -rw------- 1 boinc boinc   1618536 19. Apr 10:02 agis_ddmendpoints.agis.ALL.json
[2025-04-19 11:28:38] drwx------ 4 boinc boinc      4096 19. Apr 10:02 pilot3
[2025-04-19 11:28:38] -rw------- 1 boinc boinc        95 19. Apr 11:27 pilot_heartbeat.json
[2025-04-19 11:28:38] -rw------- 1 boinc boinc 198579267 19. Apr 11:27 HITS.44075483._066386.pool.root.1
[2025-04-19 11:28:38] -rw-r--r-- 1 boinc boinc       530 19. Apr 11:28 boinc_task_state.xml
[2025-04-19 11:28:38] -rw------- 1 boinc boinc      1036 19. Apr 11:28 memory_monitor_summary.json
[2025-04-19 11:28:38] -rw------- 1 boinc boinc    241081 19. Apr 11:28 log.44075483._066386.job.log.tgz.1
[2025-04-19 11:28:38] -rw------- 1 boinc boinc      7660 19. Apr 11:28 heartbeat.json
[2025-04-19 11:28:38] -rw-r--r-- 1 boinc boinc        27 19. Apr 11:28 wrapper_checkpoint.txt
[2025-04-19 11:28:38] -rw-r--r-- 1 boinc boinc      8192 19. Apr 11:28 boinc_mmap_file
[2025-04-19 11:28:38] -rw------- 1 boinc boinc      4539 19. Apr 11:28 pilotlog.txt
[2025-04-19 11:28:38] -rw------- 1 boinc boinc    512026 19. Apr 11:28 log.44075483._066386.job.log.1
[2025-04-19 11:28:38] -rw------- 1 boinc boinc       357 19. Apr 11:28 output.list
[2025-04-19 11:28:38] -rw-r--r-- 1 boinc boinc       620 19. Apr 11:28 runtime_log
[2025-04-19 11:28:38] -rw------- 1 boinc boinc    768000 19. Apr 11:28 result.tar.gz
[2025-04-19 11:28:38] -rw-r--r-- 1 boinc boinc     11342 19. Apr 11:28 runtime_log.err
[2025-04-19 11:28:38] -rw------- 1 boinc boinc       641 19. Apr 11:28 1M7NDmRivP7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmWv4KDmGQGRSo.diag
[2025-04-19 11:28:38] -rw-r--r-- 1 boinc boinc     21020 19. Apr 11:28 stderr.txt
[2025-04-19 11:28:38] HITS file was successfully produced:
[2025-04-19 11:28:38] -rw------- 1 boinc boinc 198579267 19. Apr 11:27 shared/HITS.pool.root.1
[2025-04-19 11:28:38]  *** Contents of shared directory: ***
[2025-04-19 11:28:38] insgesamt 412968
[2025-04-19 11:28:38] -rw-r--r-- 2 boinc boinc     17569 19. Apr 10:02 start_atlas.sh
[2025-04-19 11:28:38] -rw-r--r-- 2 boinc boinc    508893 19. Apr 10:02 input.tar.gz
[2025-04-19 11:28:38] -rw-r--r-- 2 boinc boinc 222985889 19. Apr 10:02 ATLAS.root_0
[2025-04-19 11:28:38] -rw------- 1 boinc boinc 198579267 19. Apr 11:27 HITS.pool.root.1
[2025-04-19 11:28:38] -rw------- 1 boinc boinc    768000 19. Apr 11:28 result.tar.gz
11:28:39 (2784348): run_atlas exited; CPU time 19097.161970
11:28:39 (2784348): called boinc_finish(0)

</stderr_txt>
]]>

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