Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
05:54:01 (2113): wrapper (7.7.26015): starting
05:54:01 (2113): wrapper: running run_atlas (--nthreads 12)
[2025-04-18 05:54:01] Arguments: --nthreads 12
[2025-04-18 05:54:01] Threads: 12
[2025-04-18 05:54:01] Checking for CVMFS
[2025-04-18 05:54:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-18 05:54:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-18 05:54:01] Running cvmfs_config stat atlas.cern.ch
[2025-04-18 05:54:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-18 05:54:01] 2.11.2.0 14409 376605 168412 144997 1 56 17897415 20275201 1 130560 0 22745719 99.990 6899035 54697 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-18 05:54:01] CVMFS is ok
[2025-04-18 05:54:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-18 05:54:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-18 05:54:01] Further information can be found at the LHC@home message board.
[2025-04-18 05:54:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-18 05:54:01] Checking for apptainer binary...
[2025-04-18 05:54:01] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-18 05:54:01] Running /usr/bin/apptainer --version
[2025-04-18 05:54:01] apptainer version 1.3.2-1.el7
[2025-04-18 05:54:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-18 05:54:03] c-205-32.aglt2.org
[2025-04-18 05:54:03] apptainer works
[2025-04-18 05:54:03] Set ATHENA_PROC_NUMBER=12
[2025-04-18 05:54:03] Set ATHENA_CORE_NUMBER=12
[2025-04-18 05:54:03] Starting ATLAS job with PandaID=6606058776
[2025-04-18 05:54:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-18 07:18:29]  *** The last 200 lines of the pilot log: ***
[2025-04-18 07:18:29]  lfn=log.44075483._063826.job.log.tgz.1
[2025-04-18 07:18:29]  mtime=0
[2025-04-18 07:18:29]  protocol_id=None
[2025-04-18 07:18:29]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-18 07:18:29]  replicas=None
[2025-04-18 07:18:29]  scope=mc23_13p6TeV
[2025-04-18 07:18:29]  status=None
[2025-04-18 07:18:29]  status_code=0
[2025-04-18 07:18:29]  storage_token=
[2025-04-18 07:18:29]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6606058776/log.44075483._063826.job.log.tgz.1
[2025-04-18 07:18:29]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d1/5a/log.44075483._063826.job.log.tgz.1
[2025-04-18 07:18:29]  workdir=None
[2025-04-18 07:18:29] ]
[2025-04-18 07:18:29] 2025-04-18 11:18:07,249 | INFO     | transferring file log.44075483._063826.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6606058776/log.44075483._063826.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-04-18 07:18:29] 2025-04-18 11:18:07,249 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6606058776/log.44075483._063826.job.log.tgz.1 /tmp/boinchome/slots/0/log.44075483._063826.job
[2025-04-18 07:18:29] 2025-04-18 11:18:07,272 | INFO     | adding to output.list: log.44075483._063826.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d1/5a/log.44075483._063826.job.log.tg
[2025-04-18 07:18:29] 2025-04-18 11:18:07,273 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-18 07:18:29] 2025-04-18 11:18:07,273 | INFO     | summary of transferred files:
[2025-04-18 07:18:29] 2025-04-18 11:18:07,273 | INFO     |  -- lfn=log.44075483._063826.job.log.tgz.1, status_code=0, status=transferred
[2025-04-18 07:18:29] 2025-04-18 11:18:07,273 | INFO     | stage-out finished correctly
[2025-04-18 07:18:29] 2025-04-18 11:18:07,656 | WARNING  | process 12181 can no longer be monitored (due to stat problems) - aborting
[2025-04-18 07:18:29] 2025-04-18 11:18:07,656 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6606058776/memory_monitor_summary.json (trf name=prmon)
[2025-04-18 07:18:29] 2025-04-18 11:18:07,743 | INFO     | number of running child processes to parent process 12181: 1
[2025-04-18 07:18:29] 2025-04-18 11:18:07,743 | INFO     | maximum number of monitored processes: 6
[2025-04-18 07:18:29] 2025-04-18 11:18:09,496 | INFO     | PID=5830 has CPU usage=6.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-04-18 07:18:29] 2025-04-18 11:18:09,787 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-18 07:18:29] 2025-04-18 11:18:10,246 | INFO     | monitor loop #375: job 0:6606058776 is in state 'finished'
[2025-04-18 07:18:29] 2025-04-18 11:18:10,247 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-18 07:18:29] 2025-04-18 11:18:10,684 | INFO     | job 6606058776 has state=finished
[2025-04-18 07:18:29] 2025-04-18 11:18:10,684 | INFO     | preparing for final server update for job 6606058776 in state='finished'
[2025-04-18 07:18:29] 2025-04-18 11:18:10,685 | INFO     | this job has now completed (state=finished)
[2025-04-18 07:18:29] 2025-04-18 11:18:10,685 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-18 07:18:29] 2025-04-18 11:18:10,685 | INFO     | log transfer has been attempted: DONE
[2025-04-18 07:18:29] 2025-04-18 11:18:10,685 | INFO     | job 6606058776 has finished - writing final server update
[2025-04-18 07:18:29] 2025-04-18 11:18:10,686 | INFO     | total number of processed events: 400 (read)
[2025-04-18 07:18:29] 2025-04-18 11:18:10,688 | INFO     | executing command: lscpu
[2025-04-18 07:18:29] 2025-04-18 11:18:10,716 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-18 07:18:29] 2025-04-18 11:18:12,749 | INFO     | monitor loop #376: job 0:6606058776 is in state 'finished'
[2025-04-18 07:18:29] 2025-04-18 11:18:12,749 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-18 07:18:29] 2025-04-18 11:18:15,252 | INFO     | monitor loop #377: job 0:6606058776 is in state 'finished'
[2025-04-18 07:18:29] 2025-04-18 11:18:15,252 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-18 07:18:29] 2025-04-18 11:18:16,464 | INFO     | CPU arch script returned: x86-64-v2
[2025-04-18 07:18:29] 2025-04-18 11:18:16,465 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6606058776/memory_monitor_summary.json (trf name=prmon)
[2025-04-18 07:18:29] 2025-04-18 11:18:16,466 | INFO     | extracted standard info from prmon json
[2025-04-18 07:18:29] 2025-04-18 11:18:16,466 | INFO     | extracted standard memory fields from prmon json
[2025-04-18 07:18:29] 2025-04-18 11:18:16,466 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-18 07:18:29] 2025-04-18 11:18:16,467 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-18 07:18:29] 2025-04-18 11:18:16,467 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-18 07:18:29] 2025-04-18 11:18:16,470 | INFO     | fitting pss+swap vs Time
[2025-04-18 07:18:29] 2025-04-18 11:18:16,470 | INFO     | sum of square deviations: 130793150.0
[2025-04-18 07:18:29] 2025-04-18 11:18:16,470 | INFO     | sum of deviations: 24788488137.999996
[2025-04-18 07:18:29] 2025-04-18 11:18:16,471 | INFO     | mean x: 1744972646.0
[2025-04-18 07:18:29] 2025-04-18 11:18:16,471 | INFO     | mean y: 2512070.3733333335
[2025-04-18 07:18:29] 2025-04-18 11:18:16,471 | INFO     | -- intersect: -330712313105.91046
[2025-04-18 07:18:29] 2025-04-18 11:18:16,471 | INFO     | intersect: -330712313105.91046
[2025-04-18 07:18:29] 2025-04-18 11:18:16,471 | INFO     | chi2: 1.7290131951587764
[2025-04-18 07:18:29] 2025-04-18 11:18:16,471 | INFO     | -- intersect: -330712313105.91046
[2025-04-18 07:18:29] 2025-04-18 11:18:16,471 | INFO     | current memory leak: 189.52 B/s (using 75 data points, chi2=1.73)
[2025-04-18 07:18:29] 2025-04-18 11:18:16,472 | INFO     | ..............................
[2025-04-18 07:18:29] 2025-04-18 11:18:16,472 | INFO     | . Timing measurements:
[2025-04-18 07:18:29] 2025-04-18 11:18:16,472 | INFO     | . get job = 0 s
[2025-04-18 07:18:29] 2025-04-18 11:18:16,472 | INFO     | . initial setup = 2 s
[2025-04-18 07:18:29] 2025-04-18 11:18:16,472 | INFO     | . payload setup = 7 s
[2025-04-18 07:18:29] 2025-04-18 11:18:16,472 | INFO     | . stage-in = 0 s
[2025-04-18 07:18:29] 2025-04-18 11:18:16,472 | INFO     | . payload execution = 5002 s
[2025-04-18 07:18:29] 2025-04-18 11:18:16,473 | INFO     | . stage-out = 0 s
[2025-04-18 07:18:29] 2025-04-18 11:18:16,473 | INFO     | . log creation = 0 s
[2025-04-18 07:18:29] 2025-04-18 11:18:16,473 | INFO     | ..............................
[2025-04-18 07:18:29] 2025-04-18 11:18:16,879 | INFO     | 
[2025-04-18 07:18:29] 2025-04-18 11:18:16,879 | INFO     | job summary report
[2025-04-18 07:18:29] 2025-04-18 11:18:16,888 | INFO     | --------------------------------------------------
[2025-04-18 07:18:29] 2025-04-18 11:18:16,888 | INFO     | PanDA job id: 6606058776
[2025-04-18 07:18:29] 2025-04-18 11:18:16,888 | INFO     | task id: 44075483
[2025-04-18 07:18:29] 2025-04-18 11:18:16,888 | INFO     | errors: (none)
[2025-04-18 07:18:29] 2025-04-18 11:18:16,888 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-18 07:18:29] 2025-04-18 11:18:16,889 | INFO     | pilot state: finished 
[2025-04-18 07:18:29] 2025-04-18 11:18:16,889 | INFO     | transexitcode: 0
[2025-04-18 07:18:29] 2025-04-18 11:18:16,889 | INFO     | exeerrorcode: 0
[2025-04-18 07:18:29] 2025-04-18 11:18:16,889 | INFO     | exeerrordiag: 
[2025-04-18 07:18:29] 2025-04-18 11:18:16,889 | INFO     | exitcode: 0
[2025-04-18 07:18:29] 2025-04-18 11:18:16,889 | INFO     | exitmsg: OK
[2025-04-18 07:18:29] 2025-04-18 11:18:16,890 | INFO     | cpuconsumptiontime: 46725 s
[2025-04-18 07:18:29] 2025-04-18 11:18:16,890 | INFO     | nevents: 400
[2025-04-18 07:18:29] 2025-04-18 11:18:16,890 | INFO     | neventsw: 0
[2025-04-18 07:18:29] 2025-04-18 11:18:16,890 | INFO     | pid: 12181
[2025-04-18 07:18:29] 2025-04-18 11:18:16,890 | INFO     | pgrp: 12181
[2025-04-18 07:18:29] 2025-04-18 11:18:16,890 | INFO     | corecount: 12
[2025-04-18 07:18:29] 2025-04-18 11:18:16,890 | INFO     | event service: False
[2025-04-18 07:18:29] 2025-04-18 11:18:16,890 | INFO     | sizes: {0: 2426773, 1: 2426773, 5: 2427007, 11: 2427063, 5013: 2453240, 5015: 2462181, 5018: 2462365, 5025: 2462535}
[2025-04-18 07:18:29] 2025-04-18 11:18:16,891 | INFO     | --------------------------------------------------
[2025-04-18 07:18:29] 2025-04-18 11:18:16,891 | INFO     | 
[2025-04-18 07:18:29] 2025-04-18 11:18:16,891 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-18 07:18:29] 2025-04-18 11:18:16,914 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-18 07:18:29] 2025-04-18 11:18:16,914 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-18 07:18:29] 2025-04-18 11:18:16,914 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-18 07:18:29] 2025-04-18 11:18:16,915 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-18 07:18:29] 2025-04-18 11:18:16,915 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-18 07:18:29] 2025-04-18 11:18:16,915 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-18 07:18:29] 2025-04-18 11:18:16,915 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-18 07:18:29] 2025-04-18 11:18:16,915 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-18 07:18:29] 2025-04-18 11:18:16,915 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-18 07:18:29] 2025-04-18 11:18:16,916 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-18 07:18:29] 2025-04-18 11:18:16,916 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-18 07:18:29] 2025-04-18 11:18:16,916 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-18 07:18:29] 2025-04-18 11:18:16,916 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-18 07:18:29] 2025-04-18 11:18:16,916 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-18 07:18:29] 2025-04-18 11:18:16,916 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-18 07:18:29] 2025-04-18 11:18:16,917 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-18 07:18:29] 2025-04-18 11:18:16,917 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-18 07:18:29] 2025-04-18 11:18:16,917 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-18 07:18:29] 2025-04-18 11:18:16,917 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-18 07:18:29] 2025-04-18 11:18:16,917 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-18 07:18:29] 2025-04-18 11:18:16,918 | INFO     | job 6606058776 has completed (purged errors)
[2025-04-18 07:18:29] 2025-04-18 11:18:16,918 | INFO     | overall cleanup function is called
[2025-04-18 07:18:29] 2025-04-18 11:18:17,926 | INFO     | --- collectZombieJob: --- 10, [12181]
[2025-04-18 07:18:29] 2025-04-18 11:18:17,926 | INFO     | zombie collector waiting for pid 12181
[2025-04-18 07:18:29] 2025-04-18 11:18:17,926 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-18 07:18:29] 2025-04-18 11:18:17,926 | INFO     | collected zombie processes
[2025-04-18 07:18:29] 2025-04-18 11:18:17,927 | INFO     | will attempt to kill all subprocesses of pid=12181
[2025-04-18 07:18:29] 2025-04-18 11:18:18,018 | INFO     | process IDs to be killed: [12181] (in reverse order)
[2025-04-18 07:18:29] 2025-04-18 11:18:18,069 | WARNING  | found no corresponding commands to process id(s)
[2025-04-18 07:18:29] 2025-04-18 11:18:18,069 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-18 07:18:29] 2025-04-18 11:18:18,073 | INFO     | did not find any defunct processes belonging to 12181
[2025-04-18 07:18:29] 2025-04-18 11:18:18,077 | INFO     | did not find any defunct processes belonging to 12181
[2025-04-18 07:18:29] 2025-04-18 11:18:18,077 | INFO     | ready for new job
[2025-04-18 07:18:29] 2025-04-18 11:18:18,077 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-18 07:18:29] 2025-04-18 11:18:18,079 | INFO     | **************************************
[2025-04-18 07:18:29] 2025-04-18 11:18:18,079 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-18 07:18:29] 2025-04-18 11:18:18,080 | INFO     | **************************************
[2025-04-18 07:18:29] 2025-04-18 11:18:18,080 | INFO     | 
[2025-04-18 07:18:29] 2025-04-18 11:18:18,080 | INFO     | architecture information:
[2025-04-18 07:18:29] 2025-04-18 11:18:18,081 | INFO     | executing command: cat /etc/os-release
[2025-04-18 07:18:29] 2025-04-18 11:18:18,095 | INFO     | cat /etc/os-release:
[2025-04-18 07:18:29] NAME="CentOS Linux"
[2025-04-18 07:18:29] VERSION="7 (Core)"
[2025-04-18 07:18:29] ID="centos"
[2025-04-18 07:18:29] ID_LIKE="rhel fedora"
[2025-04-18 07:18:29] VERSION_ID="7"
[2025-04-18 07:18:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-18 07:18:29] ANSI_COLOR="0;31"
[2025-04-18 07:18:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-18 07:18:29] HOME_URL="https://www.centos.org/"
[2025-04-18 07:18:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-18 07:18:29] 
[2025-04-18 07:18:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-18 07:18:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-18 07:18:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-18 07:18:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-18 07:18:29] 
[2025-04-18 07:18:29] 2025-04-18 11:18:18,095 | INFO     | **************************************
[2025-04-18 07:18:29] 2025-04-18 11:18:18,598 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-18 07:18:29] 2025-04-18 11:18:18,615 | INFO     | sufficient remaining disk space (29399973888 B)
[2025-04-18 07:18:29] 2025-04-18 11:18:18,615 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-18 07:18:29] 2025-04-18 11:18:18,616 | INFO     | current server update state: UPDATING_FINAL
[2025-04-18 07:18:29] 2025-04-18 11:18:18,616 | INFO     | update_server=False
[2025-04-18 07:18:29] 2025-04-18 11:18:18,616 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-18 07:18:29] 2025-04-18 11:18:18,616 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-18 07:18:29] 2025-04-18 11:18:18,756 | INFO     | all job control threads have been joined
[2025-04-18 07:18:29] 2025-04-18 11:18:18,760 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-18 07:18:29] 2025-04-18 11:18:18,761 | INFO     | aborting loop
[2025-04-18 07:18:29] 2025-04-18 11:18:19,412 | INFO     | all data control threads have been joined
[2025-04-18 07:18:29] 2025-04-18 11:18:19,522 | INFO     | found 0 job(s) in 20 queues
[2025-04-18 07:18:29] 2025-04-18 11:18:19,522 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-18 07:18:29] 2025-04-18 11:18:19,523 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-18 07:18:29] 2025-04-18 11:18:19,621 | INFO     | [job] retrieve thread has finished
[2025-04-18 07:18:29] 2025-04-18 11:18:19,760 | INFO     | [job] control thread has finished
[2025-04-18 07:18:29] 2025-04-18 11:18:19,766 | INFO     | [job] job monitor thread has finished
[2025-04-18 07:18:29] 2025-04-18 11:18:19,904 | INFO     | [payload] failed_post thread has finished
[2025-04-18 07:18:29] 2025-04-18 11:18:19,921 | INFO     | [payload] validate_pre thread has finished
[2025-04-18 07:18:29] 2025-04-18 11:18:19,922 | INFO     | [job] create_data_payload thread has finished
[2025-04-18 07:18:29] 2025-04-18 11:18:20,104 | INFO     | all payload control threads have been joined
[2025-04-18 07:18:29] 2025-04-18 11:18:20,265 | INFO     | [data] copytool_in thread has finished
[2025-04-18 07:18:29] 2025-04-18 11:18:20,370 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-18 07:18:29] 2025-04-18 11:18:20,381 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-18 07:18:29] 2025-04-18 11:18:20,418 | INFO     | [data] control thread has finished
[2025-04-18 07:18:29] 2025-04-18 11:18:20,478 | INFO     | [payload] validate_post thread has finished
[2025-04-18 07:18:29] 2025-04-18 11:18:20,622 | INFO     | [data] copytool_out thread has finished
[2025-04-18 07:18:29] 2025-04-18 11:18:20,911 | INFO     | [payload] execute_payloads thread has finished
[2025-04-18 07:18:29] 2025-04-18 11:18:20,966 | INFO     | [job] validate thread has finished
[2025-04-18 07:18:29] 2025-04-18 11:18:21,110 | INFO     | [payload] control thread has finished
[2025-04-18 07:18:29] 2025-04-18 11:18:21,567 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-18 07:18:29] 2025-04-18 11:18:22,572 | INFO     | [job] queue monitor thread has finished
[2025-04-18 07:18:29] 2025-04-18 11:18:24,387 | INFO     | [data] queue_monitor thread has finished
[2025-04-18 07:18:29] 2025-04-18 11:18:24,639 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140238173620032)>', '<ExcThread(monitor, started 140237946689280)>']
[2025-04-18 07:18:29] 2025-04-18 11:18:25,550 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-18 07:18:29] 2025-04-18 11:18:25,550 | INFO     | [monitor] control thread has ended
[2025-04-18 07:18:29] 2025-04-18 11:18:29,665 | INFO     | all workflow threads have been joined
[2025-04-18 07:18:29] 2025-04-18 11:18:29,665 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-18 07:18:29] 2025-04-18 11:18:29,666 | INFO     | traces error code: 0
[2025-04-18 07:18:29] 2025-04-18 11:18:29,666 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-18 07:18:29] 2025-04-18 11:18:29,762 [wrapper] ==== pilot stdout END ====
[2025-04-18 07:18:29] 2025-04-18 11:18:29,765 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-18 07:18:29] 2025-04-18 11:18:29,768 [wrapper] pilotpid: 5830
[2025-04-18 07:18:29] 2025-04-18 11:18:29,772 [wrapper] Pilot exit status: 0
[2025-04-18 07:18:29] 2025-04-18 11:18:29,786 [wrapper] pandaids: 6606058776
[2025-04-18 07:18:29] 2025-04-18 11:18:29,823 [wrapper] cleanup supervisor_pilot 29776 5831
[2025-04-18 07:18:29] 2025-04-18 11:18:29,826 [wrapper] Test setup, not cleaning
[2025-04-18 07:18:29] 2025-04-18 11:18:29,829 [wrapper] apfmon messages muted
[2025-04-18 07:18:29] 2025-04-18 11:18:29,833 [wrapper] ==== wrapper stdout END ====
[2025-04-18 07:18:29] 2025-04-18 11:18:29,837 [wrapper] ==== wrapper stderr END ====
[2025-04-18 07:18:29]  *** Error codes and diagnostics ***
[2025-04-18 07:18:29]     "exeErrorCode": 0,
[2025-04-18 07:18:29]     "exeErrorDiag": "",
[2025-04-18 07:18:29]     "pilotErrorCode": 0,
[2025-04-18 07:18:29]     "pilotErrorDiag": "",
[2025-04-18 07:18:29]  *** Listing of results directory ***
[2025-04-18 07:18:29] total 413004
[2025-04-18 07:18:29] -rw-r--r-- 1 boincer umatlas    495897 Apr 17 23:29 pilot3.tar.gz
[2025-04-18 07:18:29] -rw-r--r-- 1 boincer umatlas      5111 Apr 17 23:36 queuedata.json
[2025-04-18 07:18:29] -rwx------ 1 boincer umatlas     37140 Apr 17 23:36 runpilot2-wrapper.sh
[2025-04-18 07:18:29] -rw-r--r-- 1 boincer umatlas       100 Apr 18 05:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-18 07:18:29] -rwxr-xr-x 1 boincer umatlas      7986 Apr 18 05:54 run_atlas
[2025-04-18 07:18:29] -rw-r--r-- 1 boincer umatlas       105 Apr 18 05:54 job.xml
[2025-04-18 07:18:29] -rw-r--r-- 2 boincer umatlas 222679619 Apr 18 05:54 EVNT.44075481._002481.pool.root.1
[2025-04-18 07:18:29] -rw-r--r-- 2 boincer umatlas     17569 Apr 18 05:54 start_atlas.sh
[2025-04-18 07:18:29] drwxrwx--x 2 boincer umatlas      4096 Apr 18 05:54 shared
[2025-04-18 07:18:29] -rw-r--r-- 2 boincer umatlas    508894 Apr 18 05:54 input.tar.gz
[2025-04-18 07:18:29] -rw-r--r-- 1 boincer umatlas         0 Apr 18 05:54 boinc_lockfile
[2025-04-18 07:18:29] -rw-r--r-- 1 boincer umatlas      2578 Apr 18 05:54 pandaJob.out
[2025-04-18 07:18:29] -rw------- 1 boincer umatlas       424 Apr 18 05:54 setup.sh.local
[2025-04-18 07:18:29] -rw------- 1 boincer umatlas    990242 Apr 18 05:54 agis_schedconf.cvmfs.json
[2025-04-18 07:18:29] -rw------- 1 boincer umatlas   1618536 Apr 18 05:54 agis_ddmendpoints.agis.ALL.json
[2025-04-18 07:18:29] drwx------ 4 boincer umatlas      4096 Apr 18 05:54 pilot3
[2025-04-18 07:18:29] -rw-r--r-- 1 boincer umatlas      5868 Apr 18 07:12 init_data.xml
[2025-04-18 07:18:29] -rw------- 1 boincer umatlas 194652121 Apr 18 07:17 HITS.44075483._063826.pool.root.1
[2025-04-18 07:18:29] -rw-r--r-- 1 boincer umatlas       529 Apr 18 07:17 boinc_task_state.xml
[2025-04-18 07:18:29] -rw------- 1 boincer umatlas      1050 Apr 18 07:18 memory_monitor_summary.json
[2025-04-18 07:18:29] -rw------- 1 boincer umatlas    380436 Apr 18 07:18 log.44075483._063826.job.log.tgz.1
[2025-04-18 07:18:29] -rw------- 1 boincer umatlas      7748 Apr 18 07:18 heartbeat.json
[2025-04-18 07:18:29] -rw------- 1 boincer umatlas        95 Apr 18 07:18 pilot_heartbeat.json
[2025-04-18 07:18:29] -rw-r--r-- 1 boincer umatlas      8192 Apr 18 07:18 boinc_mmap_file
[2025-04-18 07:18:29] -rw-r--r-- 1 boincer umatlas        27 Apr 18 07:18 wrapper_checkpoint.txt
[2025-04-18 07:18:29] -rw------- 1 boincer umatlas      4353 Apr 18 07:18 pilotlog.txt
[2025-04-18 07:18:29] -rw------- 1 boincer umatlas    477455 Apr 18 07:18 log.44075483._063826.job.log.1
[2025-04-18 07:18:29] -rw------- 1 boincer umatlas       357 Apr 18 07:18 output.list
[2025-04-18 07:18:29] -rw-r--r-- 1 boincer umatlas       620 Apr 18 07:18 runtime_log
[2025-04-18 07:18:29] -rw------- 1 boincer umatlas    880640 Apr 18 07:18 result.tar.gz
[2025-04-18 07:18:29] -rw-r--r-- 1 boincer umatlas     11015 Apr 18 07:18 runtime_log.err
[2025-04-18 07:18:29] -rw------- 1 boincer umatlas       658 Apr 18 07:18 rFzLDm9hrP7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmkg4KDmCfo5Nn.diag
[2025-04-18 07:18:29] -rw-r--r-- 1 boincer umatlas     21697 Apr 18 07:18 stderr.txt
[2025-04-18 07:18:29] HITS file was successfully produced:
[2025-04-18 07:18:29] -rw------- 1 boincer umatlas 194652121 Apr 18 07:17 shared/HITS.pool.root.1
[2025-04-18 07:18:29]  *** Contents of shared directory: ***
[2025-04-18 07:18:29] total 408944
[2025-04-18 07:18:29] -rw-r--r-- 2 boincer umatlas 222679619 Apr 18 05:54 ATLAS.root_0
[2025-04-18 07:18:29] -rw-r--r-- 2 boincer umatlas     17569 Apr 18 05:54 start_atlas.sh
[2025-04-18 07:18:29] -rw-r--r-- 2 boincer umatlas    508894 Apr 18 05:54 input.tar.gz
[2025-04-18 07:18:29] -rw------- 1 boincer umatlas 194652121 Apr 18 07:17 HITS.pool.root.1
[2025-04-18 07:18:29] -rw------- 1 boincer umatlas    880640 Apr 18 07:18 result.tar.gz
07:18:31 (2113): run_atlas exited; CPU time 46707.987932
07:18:31 (2113): called boinc_finish(0)

</stderr_txt>
]]>

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