Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
05:51:45 (17874): wrapper (7.7.26015): starting
05:51:45 (17874): wrapper: running run_atlas (--nthreads 12)
[2025-04-18 05:51:45] Arguments: --nthreads 12
[2025-04-18 05:51:45] Threads: 12
[2025-04-18 05:51:45] Checking for CVMFS
[2025-04-18 05:51:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-18 05:51:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-18 05:51:45] Running cvmfs_config stat atlas.cern.ch
[2025-04-18 05:51:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-18 05:51:46] 2.11.2.0 10995 192706 158128 144997 3 56 18960496 20275201 1 130560 0 22728069 99.990 6932325 48602 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-18 05:51:46] CVMFS is ok
[2025-04-18 05:51:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-18 05:51:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-18 05:51:46] Further information can be found at the LHC@home message board.
[2025-04-18 05:51:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-18 05:51:46] Checking for apptainer binary...
[2025-04-18 05:51:46] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-18 05:51:46] Running /usr/bin/apptainer --version
[2025-04-18 05:51:46] apptainer version 1.3.2-1.el7
[2025-04-18 05:51:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-18 05:51:47] c-205-22.aglt2.org
[2025-04-18 05:51:47] apptainer works
[2025-04-18 05:51:47] Set ATHENA_PROC_NUMBER=12
[2025-04-18 05:51:47] Set ATHENA_CORE_NUMBER=12
[2025-04-18 05:51:47] Starting ATLAS job with PandaID=6606213117
[2025-04-18 05:51:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-18 07:18:12]  *** The last 200 lines of the pilot log: ***
[2025-04-18 07:18:12]  lfn=log.44075483._065693.job.log.tgz.1
[2025-04-18 07:18:12]  mtime=0
[2025-04-18 07:18:12]  protocol_id=None
[2025-04-18 07:18:12]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-18 07:18:12]  replicas=None
[2025-04-18 07:18:12]  scope=mc23_13p6TeV
[2025-04-18 07:18:12]  status=None
[2025-04-18 07:18:12]  status_code=0
[2025-04-18 07:18:12]  storage_token=
[2025-04-18 07:18:12]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6606213117/log.44075483._065693.job.log.tgz.1
[2025-04-18 07:18:12]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/59/72/log.44075483._065693.job.log.tgz.1
[2025-04-18 07:18:12]  workdir=None
[2025-04-18 07:18:12] ]
[2025-04-18 07:18:12] 2025-04-18 11:17:45,163 | INFO     | transferring file log.44075483._065693.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6606213117/log.44075483._065693.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-04-18 07:18:12] 2025-04-18 11:17:45,163 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6606213117/log.44075483._065693.job.log.tgz.1 /tmp/boinchome/slots/0/log.44075483._065693.job
[2025-04-18 07:18:12] 2025-04-18 11:17:45,183 | INFO     | adding to output.list: log.44075483._065693.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/59/72/log.44075483._065693.job.log.tg
[2025-04-18 07:18:12] 2025-04-18 11:17:45,184 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-18 07:18:12] 2025-04-18 11:17:45,184 | INFO     | summary of transferred files:
[2025-04-18 07:18:12] 2025-04-18 11:17:45,185 | INFO     |  -- lfn=log.44075483._065693.job.log.tgz.1, status_code=0, status=transferred
[2025-04-18 07:18:12] 2025-04-18 11:17:45,185 | INFO     | stage-out finished correctly
[2025-04-18 07:18:12] 2025-04-18 11:17:46,348 | INFO     | PID=21480 has CPU usage=5.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-04-18 07:18:12] 2025-04-18 11:17:47,051 | WARNING  | process 28755 can no longer be monitored (due to stat problems) - aborting
[2025-04-18 07:18:12] 2025-04-18 11:17:47,052 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6606213117/memory_monitor_summary.json (trf name=prmon)
[2025-04-18 07:18:12] 2025-04-18 11:17:47,139 | INFO     | number of running child processes to parent process 28755: 1
[2025-04-18 07:18:12] 2025-04-18 11:17:47,140 | INFO     | maximum number of monitored processes: 6
[2025-04-18 07:18:12] 2025-04-18 11:17:47,659 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-18 07:18:12] 2025-04-18 11:17:47,911 | INFO     | job 6606213117 has state=finished
[2025-04-18 07:18:12] 2025-04-18 11:17:47,911 | INFO     | preparing for final server update for job 6606213117 in state='finished'
[2025-04-18 07:18:12] 2025-04-18 11:17:47,911 | INFO     | this job has now completed (state=finished)
[2025-04-18 07:18:12] 2025-04-18 11:17:47,912 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-18 07:18:12] 2025-04-18 11:17:47,912 | INFO     | log transfer has been attempted: DONE
[2025-04-18 07:18:12] 2025-04-18 11:17:47,912 | INFO     | job 6606213117 has finished - writing final server update
[2025-04-18 07:18:12] 2025-04-18 11:17:47,912 | INFO     | total number of processed events: 400 (read)
[2025-04-18 07:18:12] 2025-04-18 11:17:47,914 | INFO     | executing command: lscpu
[2025-04-18 07:18:12] 2025-04-18 11:17:47,940 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-18 07:18:12] 2025-04-18 11:17:49,643 | INFO     | monitor loop #384: job 0:6606213117 is in state 'finished'
[2025-04-18 07:18:12] 2025-04-18 11:17:49,643 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-18 07:18:12] 2025-04-18 11:17:52,146 | INFO     | monitor loop #385: job 0:6606213117 is in state 'finished'
[2025-04-18 07:18:12] 2025-04-18 11:17:52,147 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-18 07:18:12] 2025-04-18 11:17:52,870 | INFO     | CPU arch script returned: x86-64-v2
[2025-04-18 07:18:12] 2025-04-18 11:17:52,871 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6606213117/memory_monitor_summary.json (trf name=prmon)
[2025-04-18 07:18:12] 2025-04-18 11:17:52,872 | INFO     | extracted standard info from prmon json
[2025-04-18 07:18:12] 2025-04-18 11:17:52,872 | INFO     | extracted standard memory fields from prmon json
[2025-04-18 07:18:12] 2025-04-18 11:17:52,872 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-18 07:18:12] 2025-04-18 11:17:52,873 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-18 07:18:12] 2025-04-18 11:17:52,873 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-18 07:18:12] 2025-04-18 11:17:52,876 | INFO     | fitting pss+swap vs Time
[2025-04-18 07:18:12] 2025-04-18 11:17:52,876 | INFO     | sum of square deviations: 141539398.0
[2025-04-18 07:18:12] 2025-04-18 11:17:52,876 | INFO     | sum of deviations: 25097499254.0
[2025-04-18 07:18:12] 2025-04-18 11:17:52,876 | INFO     | mean x: 1744972573.0
[2025-04-18 07:18:12] 2025-04-18 11:17:52,877 | INFO     | mean y: 2517695.3896103897
[2025-04-18 07:18:12] 2025-04-18 11:17:52,877 | INFO     | -- intersect: -309412729705.3233
[2025-04-18 07:18:12] 2025-04-18 11:17:52,877 | INFO     | intersect: -309412729705.3233
[2025-04-18 07:18:12] 2025-04-18 11:17:52,877 | INFO     | chi2: 1.7075564132347938
[2025-04-18 07:18:12] 2025-04-18 11:17:52,877 | INFO     | -- intersect: -309412729705.3233
[2025-04-18 07:18:12] 2025-04-18 11:17:52,877 | INFO     | current memory leak: 177.32 B/s (using 77 data points, chi2=1.71)
[2025-04-18 07:18:12] 2025-04-18 11:17:52,878 | INFO     | ..............................
[2025-04-18 07:18:12] 2025-04-18 11:17:52,878 | INFO     | . Timing measurements:
[2025-04-18 07:18:12] 2025-04-18 11:17:52,878 | INFO     | . get job = 0 s
[2025-04-18 07:18:12] 2025-04-18 11:17:52,878 | INFO     | . initial setup = 2 s
[2025-04-18 07:18:12] 2025-04-18 11:17:52,878 | INFO     | . payload setup = 7 s
[2025-04-18 07:18:12] 2025-04-18 11:17:52,878 | INFO     | . stage-in = 0 s
[2025-04-18 07:18:12] 2025-04-18 11:17:52,878 | INFO     | . payload execution = 5116 s
[2025-04-18 07:18:12] 2025-04-18 11:17:52,878 | INFO     | . stage-out = 0 s
[2025-04-18 07:18:12] 2025-04-18 11:17:52,878 | INFO     | . log creation = 0 s
[2025-04-18 07:18:12] 2025-04-18 11:17:52,879 | INFO     | ..............................
[2025-04-18 07:18:12] 2025-04-18 11:17:52,996 | INFO     | 
[2025-04-18 07:18:12] 2025-04-18 11:17:52,997 | INFO     | job summary report
[2025-04-18 07:18:12] 2025-04-18 11:17:52,997 | INFO     | --------------------------------------------------
[2025-04-18 07:18:12] 2025-04-18 11:17:52,997 | INFO     | PanDA job id: 6606213117
[2025-04-18 07:18:12] 2025-04-18 11:17:52,997 | INFO     | task id: 44075483
[2025-04-18 07:18:12] 2025-04-18 11:17:52,998 | INFO     | errors: (none)
[2025-04-18 07:18:12] 2025-04-18 11:17:52,998 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-18 07:18:12] 2025-04-18 11:17:52,998 | INFO     | pilot state: finished 
[2025-04-18 07:18:12] 2025-04-18 11:17:52,998 | INFO     | transexitcode: 0
[2025-04-18 07:18:12] 2025-04-18 11:17:52,998 | INFO     | exeerrorcode: 0
[2025-04-18 07:18:12] 2025-04-18 11:17:52,998 | INFO     | exeerrordiag: 
[2025-04-18 07:18:12] 2025-04-18 11:17:52,999 | INFO     | exitcode: 0
[2025-04-18 07:18:12] 2025-04-18 11:17:52,999 | INFO     | exitmsg: OK
[2025-04-18 07:18:12] 2025-04-18 11:17:52,999 | INFO     | cpuconsumptiontime: 48096 s
[2025-04-18 07:18:12] 2025-04-18 11:17:52,999 | INFO     | nevents: 400
[2025-04-18 07:18:12] 2025-04-18 11:17:52,999 | INFO     | neventsw: 0
[2025-04-18 07:18:12] 2025-04-18 11:17:52,999 | INFO     | pid: 28755
[2025-04-18 07:18:12] 2025-04-18 11:17:52,999 | INFO     | pgrp: 28755
[2025-04-18 07:18:12] 2025-04-18 11:17:53,000 | INFO     | corecount: 12
[2025-04-18 07:18:12] 2025-04-18 11:17:53,000 | INFO     | event service: False
[2025-04-18 07:18:12] 2025-04-18 11:17:53,000 | INFO     | sizes: {0: 2426824, 5: 2427030, 11: 2427086, 5127: 2453264, 5128: 2462260, 5131: 2462260, 5136: 2462558}
[2025-04-18 07:18:12] 2025-04-18 11:17:53,000 | INFO     | --------------------------------------------------
[2025-04-18 07:18:12] 2025-04-18 11:17:53,000 | INFO     | 
[2025-04-18 07:18:12] 2025-04-18 11:17:53,000 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-18 07:18:12] 2025-04-18 11:17:53,024 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-18 07:18:12] 2025-04-18 11:17:53,024 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-18 07:18:12] 2025-04-18 11:17:53,024 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-18 07:18:12] 2025-04-18 11:17:53,025 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-18 07:18:12] 2025-04-18 11:17:53,025 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-18 07:18:12] 2025-04-18 11:17:53,025 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-18 07:18:12] 2025-04-18 11:17:53,025 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-18 07:18:12] 2025-04-18 11:17:53,025 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-18 07:18:12] 2025-04-18 11:17:53,025 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-18 07:18:12] 2025-04-18 11:17:53,026 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-18 07:18:12] 2025-04-18 11:17:53,026 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-18 07:18:12] 2025-04-18 11:17:53,026 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-18 07:18:12] 2025-04-18 11:17:53,026 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-18 07:18:12] 2025-04-18 11:17:53,026 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-18 07:18:12] 2025-04-18 11:17:53,026 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-18 07:18:12] 2025-04-18 11:17:53,027 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-18 07:18:12] 2025-04-18 11:17:53,027 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-18 07:18:12] 2025-04-18 11:17:53,027 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-18 07:18:12] 2025-04-18 11:17:53,027 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-18 07:18:12] 2025-04-18 11:17:53,027 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-18 07:18:12] 2025-04-18 11:17:53,027 | INFO     | job 6606213117 has completed (purged errors)
[2025-04-18 07:18:12] 2025-04-18 11:17:53,028 | INFO     | overall cleanup function is called
[2025-04-18 07:18:12] 2025-04-18 11:17:54,036 | INFO     | --- collectZombieJob: --- 10, [28755]
[2025-04-18 07:18:12] 2025-04-18 11:17:54,036 | INFO     | zombie collector waiting for pid 28755
[2025-04-18 07:18:12] 2025-04-18 11:17:54,036 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-18 07:18:12] 2025-04-18 11:17:54,036 | INFO     | collected zombie processes
[2025-04-18 07:18:12] 2025-04-18 11:17:54,036 | INFO     | will attempt to kill all subprocesses of pid=28755
[2025-04-18 07:18:12] 2025-04-18 11:17:54,131 | INFO     | process IDs to be killed: [28755] (in reverse order)
[2025-04-18 07:18:12] 2025-04-18 11:17:54,180 | WARNING  | found no corresponding commands to process id(s)
[2025-04-18 07:18:12] 2025-04-18 11:17:54,180 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-18 07:18:12] 2025-04-18 11:17:54,183 | INFO     | did not find any defunct processes belonging to 28755
[2025-04-18 07:18:12] 2025-04-18 11:17:54,186 | INFO     | did not find any defunct processes belonging to 28755
[2025-04-18 07:18:12] 2025-04-18 11:17:54,186 | INFO     | ready for new job
[2025-04-18 07:18:12] 2025-04-18 11:17:54,186 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-18 07:18:12] 2025-04-18 11:17:54,187 | INFO     | **************************************
[2025-04-18 07:18:12] 2025-04-18 11:17:54,188 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-18 07:18:12] 2025-04-18 11:17:54,188 | INFO     | **************************************
[2025-04-18 07:18:12] 2025-04-18 11:17:54,188 | INFO     | 
[2025-04-18 07:18:12] 2025-04-18 11:17:54,188 | INFO     | architecture information:
[2025-04-18 07:18:12] 2025-04-18 11:17:54,189 | INFO     | executing command: cat /etc/os-release
[2025-04-18 07:18:12] 2025-04-18 11:17:54,201 | INFO     | cat /etc/os-release:
[2025-04-18 07:18:12] NAME="CentOS Linux"
[2025-04-18 07:18:12] VERSION="7 (Core)"
[2025-04-18 07:18:12] ID="centos"
[2025-04-18 07:18:12] ID_LIKE="rhel fedora"
[2025-04-18 07:18:12] VERSION_ID="7"
[2025-04-18 07:18:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-18 07:18:12] ANSI_COLOR="0;31"
[2025-04-18 07:18:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-18 07:18:12] HOME_URL="https://www.centos.org/"
[2025-04-18 07:18:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-18 07:18:12] 
[2025-04-18 07:18:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-18 07:18:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-18 07:18:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-18 07:18:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-18 07:18:12] 
[2025-04-18 07:18:12] 2025-04-18 11:17:54,202 | INFO     | **************************************
[2025-04-18 07:18:12] 2025-04-18 11:17:54,705 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-18 07:18:12] 2025-04-18 11:17:54,725 | INFO     | sufficient remaining disk space (29395779584 B)
[2025-04-18 07:18:12] 2025-04-18 11:17:54,725 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-18 07:18:12] 2025-04-18 11:17:54,726 | INFO     | current server update state: UPDATING_FINAL
[2025-04-18 07:18:12] 2025-04-18 11:17:54,726 | INFO     | update_server=False
[2025-04-18 07:18:12] 2025-04-18 11:17:54,726 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-18 07:18:12] 2025-04-18 11:17:54,726 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-18 07:18:12] 2025-04-18 11:17:54,727 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-18 07:18:12] 2025-04-18 11:17:54,727 | INFO     | found 0 job(s) in 20 queues
[2025-04-18 07:18:12] 2025-04-18 11:17:54,727 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-18 07:18:12] 2025-04-18 11:17:54,727 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-18 07:18:12] 2025-04-18 11:17:54,727 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-18 07:18:12] 2025-04-18 11:17:54,913 | INFO     | all payload control threads have been joined
[2025-04-18 07:18:12] 2025-04-18 11:17:55,107 | INFO     | all job control threads have been joined
[2025-04-18 07:18:12] 2025-04-18 11:17:55,488 | INFO     | all data control threads have been joined
[2025-04-18 07:18:12] 2025-04-18 11:17:55,655 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-18 07:18:12] 2025-04-18 11:17:55,655 | INFO     | aborting loop
[2025-04-18 07:18:12] 2025-04-18 11:17:55,731 | INFO     | [job] retrieve thread has finished
[2025-04-18 07:18:12] 2025-04-18 11:17:55,733 | INFO     | [job] queue monitor thread has finished
[2025-04-18 07:18:12] 2025-04-18 11:17:55,786 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-18 07:18:12] 2025-04-18 11:17:55,818 | INFO     | [payload] failed_post thread has finished
[2025-04-18 07:18:12] 2025-04-18 11:17:55,847 | INFO     | [job] validate thread has finished
[2025-04-18 07:18:12] 2025-04-18 11:17:55,852 | INFO     | [payload] execute_payloads thread has finished
[2025-04-18 07:18:12] 2025-04-18 11:17:55,918 | INFO     | [payload] control thread has finished
[2025-04-18 07:18:12] 2025-04-18 11:17:55,935 | INFO     | [job] create_data_payload thread has finished
[2025-04-18 07:18:12] 2025-04-18 11:17:56,113 | INFO     | [job] control thread has finished
[2025-04-18 07:18:12] 2025-04-18 11:17:56,160 | INFO     | [payload] validate_pre thread has finished
[2025-04-18 07:18:12] 2025-04-18 11:17:56,423 | INFO     | [data] copytool_in thread has finished
[2025-04-18 07:18:12] 2025-04-18 11:17:56,494 | INFO     | [data] control thread has finished
[2025-04-18 07:18:12] 2025-04-18 11:17:56,641 | INFO     | [payload] validate_post thread has finished
[2025-04-18 07:18:12] 2025-04-18 11:17:56,658 | INFO     | [job] job monitor thread has finished
[2025-04-18 07:18:12] 2025-04-18 11:17:57,787 | INFO     | [data] copytool_out thread has finished
[2025-04-18 07:18:12] 2025-04-18 11:17:58,732 | INFO     | [data] queue_monitor thread has finished
[2025-04-18 07:18:12] 2025-04-18 11:18:05,241 | INFO     | job.realtimelogging is not enabled
[2025-04-18 07:18:12] 2025-04-18 11:18:06,246 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-18 07:18:12] 2025-04-18 11:18:06,878 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140223315158848)>', '<ExcThread(monitor, started 140222847227648)>']
[2025-04-18 07:18:12] 2025-04-18 11:18:07,794 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-18 07:18:12] 2025-04-18 11:18:07,794 | INFO     | [monitor] control thread has ended
[2025-04-18 07:18:12] 2025-04-18 11:18:11,881 | INFO     | all workflow threads have been joined
[2025-04-18 07:18:12] 2025-04-18 11:18:11,881 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-18 07:18:12] 2025-04-18 11:18:11,881 | INFO     | traces error code: 0
[2025-04-18 07:18:12] 2025-04-18 11:18:11,882 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-18 07:18:12] 2025-04-18 11:18:11,966 [wrapper] ==== pilot stdout END ====
[2025-04-18 07:18:12] 2025-04-18 11:18:11,970 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-18 07:18:12] 2025-04-18 11:18:11,973 [wrapper] pilotpid: 21480
[2025-04-18 07:18:12] 2025-04-18 11:18:11,977 [wrapper] Pilot exit status: 0
[2025-04-18 07:18:12] 2025-04-18 11:18:11,992 [wrapper] pandaids: 6606213117
[2025-04-18 07:18:12] 2025-04-18 11:18:12,030 [wrapper] cleanup supervisor_pilot 23345 21481
[2025-04-18 07:18:12] 2025-04-18 11:18:12,034 [wrapper] Test setup, not cleaning
[2025-04-18 07:18:12] 2025-04-18 11:18:12,038 [wrapper] apfmon messages muted
[2025-04-18 07:18:12] 2025-04-18 11:18:12,042 [wrapper] ==== wrapper stdout END ====
[2025-04-18 07:18:12] 2025-04-18 11:18:12,046 [wrapper] ==== wrapper stderr END ====
[2025-04-18 07:18:12]  *** Error codes and diagnostics ***
[2025-04-18 07:18:12]     "exeErrorCode": 0,
[2025-04-18 07:18:12]     "exeErrorDiag": "",
[2025-04-18 07:18:12]     "pilotErrorCode": 0,
[2025-04-18 07:18:12]     "pilotErrorDiag": "",
[2025-04-18 07:18:12]  *** Listing of results directory ***
[2025-04-18 07:18:12] total 416600
[2025-04-18 07:18:12] -rw-r--r-- 1 boincer umatlas    495897 Apr 18 02:46 pilot3.tar.gz
[2025-04-18 07:18:12] -rwx------ 1 boincer umatlas     37140 Apr 18 02:54 runpilot2-wrapper.sh
[2025-04-18 07:18:12] -rw-r--r-- 1 boincer umatlas      5111 Apr 18 02:54 queuedata.json
[2025-04-18 07:18:12] -rw-r--r-- 1 boincer umatlas       100 Apr 18 05:51 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-18 07:18:12] -rwxr-xr-x 1 boincer umatlas      7986 Apr 18 05:51 run_atlas
[2025-04-18 07:18:12] -rw-r--r-- 1 boincer umatlas       105 Apr 18 05:51 job.xml
[2025-04-18 07:18:12] -rw-r--r-- 2 boincer umatlas 223894631 Apr 18 05:51 EVNT.44075481._002553.pool.root.1
[2025-04-18 07:18:12] -rw-r--r-- 2 boincer umatlas     17569 Apr 18 05:51 start_atlas.sh
[2025-04-18 07:18:12] drwxrwx--x 2 boincer umatlas      4096 Apr 18 05:51 shared
[2025-04-18 07:18:12] -rw-r--r-- 2 boincer umatlas    508892 Apr 18 05:51 input.tar.gz
[2025-04-18 07:18:12] -rw-r--r-- 1 boincer umatlas         0 Apr 18 05:51 boinc_lockfile
[2025-04-18 07:18:12] -rw-r--r-- 1 boincer umatlas      2579 Apr 18 05:51 pandaJob.out
[2025-04-18 07:18:12] -rw------- 1 boincer umatlas       424 Apr 18 05:51 setup.sh.local
[2025-04-18 07:18:12] -rw------- 1 boincer umatlas    990242 Apr 18 05:51 agis_schedconf.cvmfs.json
[2025-04-18 07:18:12] -rw------- 1 boincer umatlas   1618536 Apr 18 05:51 agis_ddmendpoints.agis.ALL.json
[2025-04-18 07:18:12] drwx------ 4 boincer umatlas      4096 Apr 18 05:52 pilot3
[2025-04-18 07:18:12] -rw-r--r-- 1 boincer umatlas      5868 Apr 18 07:14 init_data.xml
[2025-04-18 07:18:12] -rw------- 1 boincer umatlas        95 Apr 18 07:17 pilot_heartbeat.json
[2025-04-18 07:18:12] -rw------- 1 boincer umatlas 197152702 Apr 18 07:17 HITS.44075483._065693.pool.root.1
[2025-04-18 07:18:12] -rw-r--r-- 1 boincer umatlas       529 Apr 18 07:17 boinc_task_state.xml
[2025-04-18 07:18:12] -rw------- 1 boincer umatlas      1064 Apr 18 07:17 memory_monitor_summary.json
[2025-04-18 07:18:12] -rw------- 1 boincer umatlas    360370 Apr 18 07:17 log.44075483._065693.job.log.tgz.1
[2025-04-18 07:18:12] -rw-r--r-- 1 boincer umatlas        27 Apr 18 07:17 wrapper_checkpoint.txt
[2025-04-18 07:18:12] -rw-r--r-- 1 boincer umatlas      8192 Apr 18 07:17 boinc_mmap_file
[2025-04-18 07:18:12] -rw------- 1 boincer umatlas      7751 Apr 18 07:17 heartbeat.json
[2025-04-18 07:18:12] -rw------- 1 boincer umatlas      4548 Apr 18 07:18 pilotlog.txt
[2025-04-18 07:18:12] -rw------- 1 boincer umatlas    486450 Apr 18 07:18 log.44075483._065693.job.log.1
[2025-04-18 07:18:12] -rw------- 1 boincer umatlas       357 Apr 18 07:18 output.list
[2025-04-18 07:18:12] -rw-r--r-- 1 boincer umatlas       620 Apr 18 07:18 runtime_log
[2025-04-18 07:18:12] -rw------- 1 boincer umatlas    870400 Apr 18 07:18 result.tar.gz
[2025-04-18 07:18:12] -rw-r--r-- 1 boincer umatlas     11015 Apr 18 07:18 runtime_log.err
[2025-04-18 07:18:12] -rw------- 1 boincer umatlas       658 Apr 18 07:18 cA8NDminuP7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmAfeLDmrdKh5m.diag
[2025-04-18 07:18:12] -rw-r--r-- 1 boincer umatlas     21663 Apr 18 07:18 stderr.txt
[2025-04-18 07:18:12] HITS file was successfully produced:
[2025-04-18 07:18:12] -rw------- 1 boincer umatlas 197152702 Apr 18 07:17 shared/HITS.pool.root.1
[2025-04-18 07:18:12]  *** Contents of shared directory: ***
[2025-04-18 07:18:12] total 412552
[2025-04-18 07:18:12] -rw-r--r-- 2 boincer umatlas 223894631 Apr 18 05:51 ATLAS.root_0
[2025-04-18 07:18:12] -rw-r--r-- 2 boincer umatlas     17569 Apr 18 05:51 start_atlas.sh
[2025-04-18 07:18:12] -rw-r--r-- 2 boincer umatlas    508892 Apr 18 05:51 input.tar.gz
[2025-04-18 07:18:12] -rw------- 1 boincer umatlas 197152702 Apr 18 07:17 HITS.pool.root.1
[2025-04-18 07:18:12] -rw------- 1 boincer umatlas    870400 Apr 18 07:18 result.tar.gz
07:18:13 (17874): run_atlas exited; CPU time 48069.739782
07:18:13 (17874): called boinc_finish(0)

</stderr_txt>
]]>

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