Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:53:09 (623959): wrapper (7.7.26015): starting
20:53:09 (623959): wrapper: running run_atlas (--nthreads 6)
[2025-04-18 20:53:09] Arguments: --nthreads 6
[2025-04-18 20:53:09] Threads: 6
[2025-04-18 20:53:09] Checking for CVMFS
[2025-04-18 20:53:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-18 20:53:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-18 20:53:09] Running cvmfs_config stat atlas.cern.ch
[2025-04-18 20:53:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-18 20:53:10] 2.11.5.0 362492 683 63384 145001 2 61 16791325 20971521 929 130560 0 700983 99.993 158582 66 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-04-18 20:53:10] CVMFS is ok
[2025-04-18 20:53:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-18 20:53:10] Checking for apptainer binary...
[2025-04-18 20:53:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-18 20:53:10] Running /usr/bin/apptainer --version
[2025-04-18 20:53:10] apptainer version 1.3.6-1.el9
[2025-04-18 20:53:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-18 20:53:10] testio005
[2025-04-18 20:53:10] apptainer works
[2025-04-18 20:53:10] Set ATHENA_PROC_NUMBER=6
[2025-04-18 20:53:10] Set ATHENA_CORE_NUMBER=6
[2025-04-18 20:53:10] Starting ATLAS job with PandaID=6606189681
[2025-04-18 20:53:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-18 22:47:49]  *** The last 200 lines of the pilot log: ***
[2025-04-18 22:47:49] 2025-04-18 13:47:31,397 | INFO     | mean y: 2365264.952830189
[2025-04-18 22:47:49] 2025-04-18 13:47:31,397 | INFO     | -- intersect: -121982854121.94502
[2025-04-18 22:47:49] 2025-04-18 13:47:31,397 | INFO     | intersect: -121982854121.94502
[2025-04-18 22:47:49] 2025-04-18 13:47:31,397 | INFO     | chi2: 1.8816054923313505
[2025-04-18 22:47:49] 2025-04-18 13:47:31,398 | INFO     | current chi2=1.8816054923313505 (change=53.88518265251327 %)
[2025-04-18 22:47:49] 2025-04-18 13:47:31,398 | INFO     | sum of square deviations: 319447850.0
[2025-04-18 22:47:49] 2025-04-18 13:47:31,398 | INFO     | sum of deviations: 9037826246.000002
[2025-04-18 22:47:49] 2025-04-18 13:47:31,398 | INFO     | mean x: 1744980888.0
[2025-04-18 22:47:49] 2025-04-18 13:47:31,399 | INFO     | mean y: 2416596.6435643565
[2025-04-18 22:47:49] 2025-04-18 13:47:31,399 | INFO     | -- intersect: -49366624604.71306
[2025-04-18 22:47:49] 2025-04-18 13:47:31,399 | INFO     | intersect: -49366624604.71306
[2025-04-18 22:47:49] 2025-04-18 13:47:31,399 | INFO     | chi2: 0.8953326618321933
[2025-04-18 22:47:49] 2025-04-18 13:47:31,399 | INFO     | current chi2=0.8953326618321933 (change=52.41655780230231 %)
[2025-04-18 22:47:49] 2025-04-18 13:47:31,399 | INFO     | sum of square deviations: 274312120.0
[2025-04-18 22:47:49] 2025-04-18 13:47:31,400 | INFO     | sum of deviations: -4597564235.5
[2025-04-18 22:47:49] 2025-04-18 13:47:31,400 | INFO     | mean x: 1744981040.5
[2025-04-18 22:47:49] 2025-04-18 13:47:31,400 | INFO     | mean y: 2462357.1145833335
[2025-04-18 22:47:49] 2025-04-18 13:47:31,400 | INFO     | -- intersect: 29248936860.058075
[2025-04-18 22:47:49] 2025-04-18 13:47:31,400 | INFO     | intersect: 29248936860.058075
[2025-04-18 22:47:49] 2025-04-18 13:47:31,400 | INFO     | chi2: 0.07375182703818516
[2025-04-18 22:47:49] 2025-04-18 13:47:31,401 | INFO     | current chi2=0.07375182703818516 (change=91.7626341378789 %)
[2025-04-18 22:47:49] 2025-04-18 13:47:31,401 | INFO     | sum of square deviations: 233641590.0
[2025-04-18 22:47:49] 2025-04-18 13:47:31,401 | INFO     | sum of deviations: -2059971890.9999998
[2025-04-18 22:47:49] 2025-04-18 13:47:31,401 | INFO     | mean x: 1744981193.0
[2025-04-18 22:47:49] 2025-04-18 13:47:31,401 | INFO     | mean y: 2452670.3736263737
[2025-04-18 22:47:49] 2025-04-18 13:47:31,401 | INFO     | -- intersect: 15387608232.376287
[2025-04-18 22:47:49] 2025-04-18 13:47:31,402 | INFO     | intersect: 15387608232.376287
[2025-04-18 22:47:49] 2025-04-18 13:47:31,402 | INFO     | chi2: 0.04814289160458187
[2025-04-18 22:47:49] 2025-04-18 13:47:31,402 | INFO     | current chi2=0.04814289160458187 (change=34.723120039242154 %)
[2025-04-18 22:47:49] 2025-04-18 13:47:31,402 | INFO     | sum of square deviations: 197203697.5
[2025-04-18 22:47:49] 2025-04-18 13:47:31,403 | INFO     | sum of deviations: 405716886.49999994
[2025-04-18 22:47:49] 2025-04-18 13:47:31,403 | INFO     | mean x: 1744981345.5
[2025-04-18 22:47:49] 2025-04-18 13:47:31,403 | INFO     | mean y: 2442603.0581395347
[2025-04-18 22:47:49] 2025-04-18 13:47:31,403 | INFO     | -- intersect: -3587593524.417821
[2025-04-18 22:47:49] 2025-04-18 13:47:31,403 | INFO     | intersect: -3587593524.417821
[2025-04-18 22:47:49] 2025-04-18 13:47:31,403 | INFO     | chi2: 0.0010584595446565224
[2025-04-18 22:47:49] 2025-04-18 13:47:31,403 | INFO     | current chi2=0.0010584595446565224 (change=97.80142091723509 %)
[2025-04-18 22:47:49] 2025-04-18 13:47:31,403 | INFO     | sum of square deviations: 164765880.0
[2025-04-18 22:47:49] 2025-04-18 13:47:31,404 | INFO     | sum of deviations: 162500035.0000001
[2025-04-18 22:47:49] 2025-04-18 13:47:31,404 | INFO     | mean x: 1744981498.0
[2025-04-18 22:47:49] 2025-04-18 13:47:31,404 | INFO     | mean y: 2443744.8518518517
[2025-04-18 22:47:49] 2025-04-18 13:47:31,404 | INFO     | -- intersect: -1718540930.4908378
[2025-04-18 22:47:49] 2025-04-18 13:47:31,404 | INFO     | intersect: -1718540930.4908378
[2025-04-18 22:47:49] 2025-04-18 13:47:31,404 | INFO     | chi2: 0.0008638373338770031
[2025-04-18 22:47:49] 2025-04-18 13:47:31,405 | INFO     | current chi2=0.0008638373338770031 (change=18.387307456580746 %)
[2025-04-18 22:47:49] 2025-04-18 13:47:31,405 | INFO     | left removable region: 60
[2025-04-18 22:47:49] 2025-04-18 13:47:31,405 | INFO     | sum of square deviations: 28242390.0
[2025-04-18 22:47:49] 2025-04-18 13:47:31,405 | INFO     | sum of deviations: -158335504.00000003
[2025-04-18 22:47:49] 2025-04-18 13:47:31,405 | INFO     | mean x: 1744982230.0
[2025-04-18 22:47:49] 2025-04-18 13:47:31,405 | INFO     | mean y: 2446643.6
[2025-04-18 22:47:49] 2025-04-18 13:47:31,405 | INFO     | -- intersect: 9785352440.811
[2025-04-18 22:47:49] 2025-04-18 13:47:31,405 | INFO     | intersect: 9785352440.811
[2025-04-18 22:47:49] 2025-04-18 13:47:31,406 | INFO     | chi2: 0.00040959410821585
[2025-04-18 22:47:49] 2025-04-18 13:47:31,406 | INFO     | -- intersect: 9785352440.811
[2025-04-18 22:47:49] 2025-04-18 13:47:31,406 | INFO     | current memory leak: -5.61 B/s (using 45 data points, chi2=0.00)
[2025-04-18 22:47:49] 2025-04-18 13:47:31,406 | INFO     | ..............................
[2025-04-18 22:47:49] 2025-04-18 13:47:31,406 | INFO     | . Timing measurements:
[2025-04-18 22:47:49] 2025-04-18 13:47:31,406 | INFO     | . get job = 0 s
[2025-04-18 22:47:49] 2025-04-18 13:47:31,407 | INFO     | . initial setup = 7 s
[2025-04-18 22:47:49] 2025-04-18 13:47:31,407 | INFO     | . payload setup = 4 s
[2025-04-18 22:47:49] 2025-04-18 13:47:31,407 | INFO     | . stage-in = 0 s
[2025-04-18 22:47:49] 2025-04-18 13:47:31,407 | INFO     | . payload execution = 6745 s
[2025-04-18 22:47:49] 2025-04-18 13:47:31,407 | INFO     | . stage-out = 0 s
[2025-04-18 22:47:49] 2025-04-18 13:47:31,407 | INFO     | . log creation = 0 s
[2025-04-18 22:47:49] 2025-04-18 13:47:31,407 | INFO     | ..............................
[2025-04-18 22:47:49] 2025-04-18 13:47:31,498 | INFO     | 
[2025-04-18 22:47:49] 2025-04-18 13:47:31,498 | INFO     | job summary report
[2025-04-18 22:47:49] 2025-04-18 13:47:31,498 | INFO     | --------------------------------------------------
[2025-04-18 22:47:49] 2025-04-18 13:47:31,498 | INFO     | PanDA job id: 6606189681
[2025-04-18 22:47:49] 2025-04-18 13:47:31,498 | INFO     | task id: 44075483
[2025-04-18 22:47:49] 2025-04-18 13:47:31,498 | INFO     | errors: (none)
[2025-04-18 22:47:49] 2025-04-18 13:47:31,498 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-18 22:47:49] 2025-04-18 13:47:31,498 | INFO     | pilot state: finished 
[2025-04-18 22:47:49] 2025-04-18 13:47:31,499 | INFO     | transexitcode: 0
[2025-04-18 22:47:49] 2025-04-18 13:47:31,499 | INFO     | exeerrorcode: 0
[2025-04-18 22:47:49] 2025-04-18 13:47:31,499 | INFO     | exeerrordiag: 
[2025-04-18 22:47:49] 2025-04-18 13:47:31,499 | INFO     | exitcode: 0
[2025-04-18 22:47:49] 2025-04-18 13:47:31,499 | INFO     | exitmsg: OK
[2025-04-18 22:47:49] 2025-04-18 13:47:31,499 | INFO     | cpuconsumptiontime: 33939 s
[2025-04-18 22:47:49] 2025-04-18 13:47:31,499 | INFO     | nevents: 400
[2025-04-18 22:47:49] 2025-04-18 13:47:31,499 | INFO     | neventsw: 0
[2025-04-18 22:47:49] 2025-04-18 13:47:31,499 | INFO     | pid: 634204
[2025-04-18 22:47:49] 2025-04-18 13:47:31,499 | INFO     | pgrp: 634204
[2025-04-18 22:47:49] 2025-04-18 13:47:31,499 | INFO     | corecount: 6
[2025-04-18 22:47:49] 2025-04-18 13:47:31,499 | INFO     | event service: False
[2025-04-18 22:47:49] 2025-04-18 13:47:31,499 | INFO     | sizes: {0: 2426600, 1: 2426799, 4: 2427005, 12: 2427033, 6754: 2462996, 6755: 2462996, 6832: 2463294}
[2025-04-18 22:47:49] 2025-04-18 13:47:31,499 | INFO     | --------------------------------------------------
[2025-04-18 22:47:49] 2025-04-18 13:47:31,499 | INFO     | 
[2025-04-18 22:47:49] 2025-04-18 13:47:31,500 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2025-04-18 22:47:49] 2025-04-18 13:47:31,517 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-18 22:47:49] 2025-04-18 13:47:31,517 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-18 22:47:49] 2025-04-18 13:47:31,517 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-18 22:47:49] 2025-04-18 13:47:31,517 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-18 22:47:49] 2025-04-18 13:47:31,517 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-18 22:47:49] 2025-04-18 13:47:31,517 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-18 22:47:49] 2025-04-18 13:47:31,518 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-18 22:47:49] 2025-04-18 13:47:31,518 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-18 22:47:49] 2025-04-18 13:47:31,518 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-18 22:47:49] 2025-04-18 13:47:31,518 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-18 22:47:49] 2025-04-18 13:47:31,518 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-18 22:47:49] 2025-04-18 13:47:31,518 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-18 22:47:49] 2025-04-18 13:47:31,518 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-18 22:47:49] 2025-04-18 13:47:31,518 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-18 22:47:49] 2025-04-18 13:47:31,518 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-18 22:47:49] 2025-04-18 13:47:31,518 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-18 22:47:49] 2025-04-18 13:47:31,518 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-18 22:47:49] 2025-04-18 13:47:31,518 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-18 22:47:49] 2025-04-18 13:47:31,518 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-18 22:47:49] 2025-04-18 13:47:31,518 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-18 22:47:49] 2025-04-18 13:47:31,519 | INFO     | job 6606189681 has completed (purged errors)
[2025-04-18 22:47:49] 2025-04-18 13:47:31,519 | INFO     | overall cleanup function is called
[2025-04-18 22:47:49] 2025-04-18 13:47:32,526 | INFO     | --- collectZombieJob: --- 10, [634204]
[2025-04-18 22:47:49] 2025-04-18 13:47:32,526 | INFO     | zombie collector waiting for pid 634204
[2025-04-18 22:47:49] 2025-04-18 13:47:32,526 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-18 22:47:49] 2025-04-18 13:47:32,526 | INFO     | collected zombie processes
[2025-04-18 22:47:49] 2025-04-18 13:47:32,526 | INFO     | will attempt to kill all subprocesses of pid=634204
[2025-04-18 22:47:49] 2025-04-18 13:47:32,630 | INFO     | process IDs to be killed: [634204] (in reverse order)
[2025-04-18 22:47:49] 2025-04-18 13:47:32,678 | WARNING  | found no corresponding commands to process id(s)
[2025-04-18 22:47:49] 2025-04-18 13:47:32,678 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-18 22:47:49] 2025-04-18 13:47:32,682 | INFO     | did not find any defunct processes belonging to 634204
[2025-04-18 22:47:49] 2025-04-18 13:47:32,685 | INFO     | did not find any defunct processes belonging to 634204
[2025-04-18 22:47:49] 2025-04-18 13:47:32,685 | INFO     | ready for new job
[2025-04-18 22:47:49] 2025-04-18 13:47:32,685 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-18 22:47:49] 2025-04-18 13:47:32,687 | INFO     | **************************************
[2025-04-18 22:47:49] 2025-04-18 13:47:32,687 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-18 22:47:49] 2025-04-18 13:47:32,687 | INFO     | **************************************
[2025-04-18 22:47:49] 2025-04-18 13:47:32,687 | INFO     | 
[2025-04-18 22:47:49] 2025-04-18 13:47:32,688 | INFO     | architecture information:
[2025-04-18 22:47:49] 2025-04-18 13:47:32,688 | INFO     | executing command: cat /etc/os-release
[2025-04-18 22:47:49] 2025-04-18 13:47:32,700 | INFO     | cat /etc/os-release:
[2025-04-18 22:47:49] NAME="CentOS Linux"
[2025-04-18 22:47:49] VERSION="7 (Core)"
[2025-04-18 22:47:49] ID="centos"
[2025-04-18 22:47:49] ID_LIKE="rhel fedora"
[2025-04-18 22:47:49] VERSION_ID="7"
[2025-04-18 22:47:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-18 22:47:49] ANSI_COLOR="0;31"
[2025-04-18 22:47:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-18 22:47:49] HOME_URL="https://www.centos.org/"
[2025-04-18 22:47:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-18 22:47:49] 
[2025-04-18 22:47:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-18 22:47:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-18 22:47:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-18 22:47:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-18 22:47:49] 
[2025-04-18 22:47:49] 2025-04-18 13:47:32,701 | INFO     | **************************************
[2025-04-18 22:47:49] 2025-04-18 13:47:33,202 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2025-04-18 22:47:49] 2025-04-18 13:47:33,219 | INFO     | sufficient remaining disk space (100122230784 B)
[2025-04-18 22:47:49] 2025-04-18 13:47:33,219 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-18 22:47:49] 2025-04-18 13:47:33,219 | INFO     | current server update state: UPDATING_FINAL
[2025-04-18 22:47:49] 2025-04-18 13:47:33,220 | INFO     | update_server=False
[2025-04-18 22:47:49] 2025-04-18 13:47:33,220 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-18 22:47:49] 2025-04-18 13:47:33,220 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-18 22:47:49] 2025-04-18 13:47:33,220 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-18 22:47:49] 2025-04-18 13:47:33,220 | INFO     | aborting loop
[2025-04-18 22:47:49] 2025-04-18 13:47:33,277 | INFO     | PID=627657 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-04-18 22:47:49] 2025-04-18 13:47:33,278 | INFO     | .. there are 2 such processes running
[2025-04-18 22:47:49] 2025-04-18 13:47:33,278 | INFO     | found 0 job(s) in 20 queues
[2025-04-18 22:47:49] 2025-04-18 13:47:33,278 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-18 22:47:49] 2025-04-18 13:47:33,278 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-18 22:47:49] 2025-04-18 13:47:33,511 | INFO     | all job control threads have been joined
[2025-04-18 22:47:49] 2025-04-18 13:47:33,844 | INFO     | all data control threads have been joined
[2025-04-18 22:47:49] 2025-04-18 13:47:34,215 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-18 22:47:49] 2025-04-18 13:47:34,225 | INFO     | [job] job monitor thread has finished
[2025-04-18 22:47:49] 2025-04-18 13:47:34,225 | INFO     | [job] retrieve thread has finished
[2025-04-18 22:47:49] 2025-04-18 13:47:34,226 | INFO     | [job] queue monitor thread has finished
[2025-04-18 22:47:49] 2025-04-18 13:47:34,460 | INFO     | [payload] failed_post thread has finished
[2025-04-18 22:47:49] 2025-04-18 13:47:34,516 | INFO     | [job] control thread has finished
[2025-04-18 22:47:49] 2025-04-18 13:47:34,524 | INFO     | all payload control threads have been joined
[2025-04-18 22:47:49] 2025-04-18 13:47:34,576 | INFO     | [data] copytool_in thread has finished
[2025-04-18 22:47:49] 2025-04-18 13:47:34,849 | INFO     | [data] control thread has finished
[2025-04-18 22:47:49] 2025-04-18 13:47:34,887 | INFO     | [payload] execute_payloads thread has finished
[2025-04-18 22:47:49] 2025-04-18 13:47:35,050 | INFO     | [job] validate thread has finished
[2025-04-18 22:47:49] 2025-04-18 13:47:35,233 | INFO     | [payload] validate_pre thread has finished
[2025-04-18 22:47:49] 2025-04-18 13:47:35,447 | INFO     | [job] create_data_payload thread has finished
[2025-04-18 22:47:49] 2025-04-18 13:47:35,529 | INFO     | [payload] control thread has finished
[2025-04-18 22:47:49] 2025-04-18 13:47:35,635 | INFO     | [payload] validate_post thread has finished
[2025-04-18 22:47:49] 2025-04-18 13:47:36,220 | INFO     | [data] copytool_out thread has finished
[2025-04-18 22:47:49] 2025-04-18 13:47:36,281 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-18 22:47:49] 2025-04-18 13:47:40,287 | INFO     | [data] queue_monitor thread has finished
[2025-04-18 22:47:49] 2025-04-18 13:47:43,392 | INFO     | job.realtimelogging is not enabled
[2025-04-18 22:47:49] 2025-04-18 13:47:44,397 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-18 22:47:49] 2025-04-18 13:47:44,407 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140016719206208)>', '<ExcThread(monitor, started 140015933847296)>']
[2025-04-18 22:47:49] 2025-04-18 13:47:45,338 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-18 22:47:49] 2025-04-18 13:47:45,338 | INFO     | [monitor] control thread has ended
[2025-04-18 22:47:49] 2025-04-18 13:47:49,432 | INFO     | all workflow threads have been joined
[2025-04-18 22:47:49] 2025-04-18 13:47:49,432 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-18 22:47:49] 2025-04-18 13:47:49,433 | INFO     | traces error code: 0
[2025-04-18 22:47:49] 2025-04-18 13:47:49,433 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-18 22:47:49] 2025-04-18 13:47:49,541 [wrapper] ==== pilot stdout END ====
[2025-04-18 22:47:49] 2025-04-18 13:47:49,543 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-18 22:47:49] 2025-04-18 13:47:49,546 [wrapper] pilotpid: 627657
[2025-04-18 22:47:49] 2025-04-18 13:47:49,549 [wrapper] Pilot exit status: 0
[2025-04-18 22:47:49] 2025-04-18 13:47:49,557 [wrapper] pandaids: 6606189681
[2025-04-18 22:47:49] 2025-04-18 13:47:49,590 [wrapper] cleanup supervisor_pilot  675274 627658
[2025-04-18 22:47:49] 2025-04-18 13:47:49,593 [wrapper] Test setup, not cleaning
[2025-04-18 22:47:49] 2025-04-18 13:47:49,595 [wrapper] apfmon messages muted
[2025-04-18 22:47:49] 2025-04-18 13:47:49,598 [wrapper] ==== wrapper stdout END ====
[2025-04-18 22:47:49] 2025-04-18 13:47:49,600 [wrapper] ==== wrapper stderr END ====
[2025-04-18 22:47:49]  *** Error codes and diagnostics ***
[2025-04-18 22:47:49]     "exeErrorCode": 0,
[2025-04-18 22:47:49]     "exeErrorDiag": "",
[2025-04-18 22:47:49]     "pilotErrorCode": 0,
[2025-04-18 22:47:49]     "pilotErrorDiag": "",
[2025-04-18 22:47:49]  *** Listing of results directory ***
[2025-04-18 22:47:49] total 411084
[2025-04-18 22:47:49] -rw-r--r--. 1 boinc boinc    495897 Apr 18 15:15 pilot3.tar.gz
[2025-04-18 22:47:49] -rw-r--r--. 1 boinc boinc      5111 Apr 18 15:33 queuedata.json
[2025-04-18 22:47:49] -rwx------. 1 boinc boinc     37140 Apr 18 15:36 runpilot2-wrapper.sh
[2025-04-18 22:47:49] -rw-r--r--. 1 boinc boinc       100 Apr 18 20:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-18 22:47:49] -rwxr-xr-x. 1 boinc boinc      7986 Apr 18 20:53 run_atlas
[2025-04-18 22:47:49] -rw-r--r--. 1 boinc boinc       105 Apr 18 20:53 job.xml
[2025-04-18 22:47:49] -rw-r--r--. 2 boinc boinc 223704051 Apr 18 20:53 EVNT.44075481._002545.pool.root.1
[2025-04-18 22:47:49] -rw-r--r--. 2 boinc boinc     17569 Apr 18 20:53 start_atlas.sh
[2025-04-18 22:47:49] drwxrwx--x. 2 boinc boinc        68 Apr 18 20:53 shared
[2025-04-18 22:47:49] -rw-r--r--. 2 boinc boinc    508891 Apr 18 20:53 input.tar.gz
[2025-04-18 22:47:49] -rw-r--r--. 1 boinc boinc      9362 Apr 18 20:53 init_data.xml
[2025-04-18 22:47:49] -rw-r--r--. 1 boinc boinc         0 Apr 18 20:53 boinc_lockfile
[2025-04-18 22:47:49] -rw-r--r--. 1 boinc boinc      2577 Apr 18 20:53 pandaJob.out
[2025-04-18 22:47:49] -rw-------. 1 boinc boinc       424 Apr 18 20:53 setup.sh.local
[2025-04-18 22:47:49] -rw-------. 1 boinc boinc    990572 Apr 18 20:53 agis_schedconf.cvmfs.json
[2025-04-18 22:47:49] -rw-------. 1 boinc boinc   1618536 Apr 18 20:53 agis_ddmendpoints.agis.ALL.json
[2025-04-18 22:47:49] drwx------. 4 boinc boinc      4096 Apr 18 20:53 pilot3
[2025-04-18 22:47:49] -rw-------. 1 boinc boinc 191539412 Apr 18 22:45 HITS.44075483._065469.pool.root.1
[2025-04-18 22:47:49] -rw-r--r--. 1 boinc boinc       529 Apr 18 22:45 boinc_task_state.xml
[2025-04-18 22:47:49] -rw-------. 1 boinc boinc      1018 Apr 18 22:46 memory_monitor_summary.json
[2025-04-18 22:47:49] -rw-------. 1 boinc boinc    276483 Apr 18 22:46 log.44075483._065469.job.log.tgz.1
[2025-04-18 22:47:49] -rw-------. 1 boinc boinc        95 Apr 18 22:47 pilot_heartbeat.json
[2025-04-18 22:47:49] -rw-------. 1 boinc boinc      7661 Apr 18 22:47 heartbeat.json
[2025-04-18 22:47:49] -rw-r--r--. 1 boinc boinc      8192 Apr 18 22:47 boinc_mmap_file
[2025-04-18 22:47:49] -rw-r--r--. 1 boinc boinc        27 Apr 18 22:47 wrapper_checkpoint.txt
[2025-04-18 22:47:49] -rw-------. 1 boinc boinc      4819 Apr 18 22:47 pilotlog.txt
[2025-04-18 22:47:49] -rw-------. 1 boinc boinc    651225 Apr 18 22:47 log.44075483._065469.job.log.1
[2025-04-18 22:47:49] -rw-------. 1 boinc boinc       357 Apr 18 22:47 output.list
[2025-04-18 22:47:49] -rw-r--r--. 1 boinc boinc       620 Apr 18 22:47 runtime_log
[2025-04-18 22:47:49] -rw-------. 1 boinc boinc    942080 Apr 18 22:47 result.tar.gz
[2025-04-18 22:47:49] -rw-r--r--. 1 boinc boinc     10971 Apr 18 22:47 runtime_log.err
[2025-04-18 22:47:49] -rw-------. 1 boinc boinc       642 Apr 18 22:47 pq8KDmeVuP7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmjq4KDmSsfbVn.diag
[2025-04-18 22:47:49] -rw-r--r--. 1 boinc boinc     20538 Apr 18 22:47 stderr.txt
[2025-04-18 22:47:49] HITS file was successfully produced:
[2025-04-18 22:47:49] -rw-------. 1 boinc boinc 191539412 Apr 18 22:45 shared/HITS.pool.root.1
[2025-04-18 22:47:49]  *** Contents of shared directory: ***
[2025-04-18 22:47:49] total 406956
[2025-04-18 22:47:49] -rw-r--r--. 2 boinc boinc 223704051 Apr 18 20:53 ATLAS.root_0
[2025-04-18 22:47:49] -rw-r--r--. 2 boinc boinc     17569 Apr 18 20:53 start_atlas.sh
[2025-04-18 22:47:49] -rw-r--r--. 2 boinc boinc    508891 Apr 18 20:53 input.tar.gz
[2025-04-18 22:47:49] -rw-------. 1 boinc boinc 191539412 Apr 18 22:45 HITS.pool.root.1
[2025-04-18 22:47:49] -rw-------. 1 boinc boinc    942080 Apr 18 22:47 result.tar.gz
22:47:50 (623959): run_atlas exited; CPU time 34014.645676
22:47:50 (623959): called boinc_finish(0)

</stderr_txt>
]]>

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