Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
05:23:09 (8774): wrapper (7.7.26015): starting
05:23:09 (8774): wrapper: running run_atlas (--nthreads 12)
[2025-04-18 05:23:09] Arguments: --nthreads 12
[2025-04-18 05:23:09] Threads: 12
[2025-04-18 05:23:09] Checking for CVMFS
[2025-04-18 05:23:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-18 05:23:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-18 05:23:09] Running cvmfs_config stat atlas.cern.ch
[2025-04-18 05:23:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-18 05:23:09] 2.11.2.0 5876 86262 149100 144997 1 55 18622206 20275200 1 130560 0 22366697 99.969 7234531 52184 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-18 05:23:09] CVMFS is ok
[2025-04-18 05:23:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-18 05:23:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-18 05:23:09] Further information can be found at the LHC@home message board.
[2025-04-18 05:23:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-18 05:23:09] Checking for apptainer binary...
[2025-04-18 05:23:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-18 05:23:09] Running /usr/bin/apptainer --version
[2025-04-18 05:23:09] apptainer version 1.3.2-1.el7
[2025-04-18 05:23:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-18 05:23:10] c-205-31.aglt2.org
[2025-04-18 05:23:10] apptainer works
[2025-04-18 05:23:10] Set ATHENA_PROC_NUMBER=12
[2025-04-18 05:23:10] Set ATHENA_CORE_NUMBER=12
[2025-04-18 05:23:11] Starting ATLAS job with PandaID=6606189406
[2025-04-18 05:23:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-18 06:47:16]  *** The last 200 lines of the pilot log: ***
[2025-04-18 06:47:16]  guid=a1c850b7-c855-40c8-89f5-74b65b3f1e29
[2025-04-18 06:47:16]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-04-18 06:47:16]  is_altstaged=None
[2025-04-18 06:47:16]  is_tar=False
[2025-04-18 06:47:16]  lfn=log.44075483._065434.job.log.tgz.1
[2025-04-18 06:47:16]  mtime=0
[2025-04-18 06:47:16]  protocol_id=None
[2025-04-18 06:47:16]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-18 06:47:16]  replicas=None
[2025-04-18 06:47:16]  scope=mc23_13p6TeV
[2025-04-18 06:47:16]  status=None
[2025-04-18 06:47:16]  status_code=0
[2025-04-18 06:47:16]  storage_token=
[2025-04-18 06:47:16]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6606189406/log.44075483._065434.job.log.tgz.1
[2025-04-18 06:47:16]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/73/b1/log.44075483._065434.job.log.tgz.1
[2025-04-18 06:47:16]  workdir=None
[2025-04-18 06:47:16] ]
[2025-04-18 06:47:16] 2025-04-18 10:46:55,972 | INFO     | transferring file log.44075483._065434.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6606189406/log.44075483._065434.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-04-18 06:47:16] 2025-04-18 10:46:55,972 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6606189406/log.44075483._065434.job.log.tgz.1 /tmp/boinchome/slots/0/log.44075483._065434.job
[2025-04-18 06:47:16] 2025-04-18 10:46:55,992 | INFO     | PID=12397 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-04-18 06:47:16] 2025-04-18 10:46:55,995 | INFO     | adding to output.list: log.44075483._065434.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/73/b1/log.44075483._065434.job.log.tg
[2025-04-18 06:47:16] 2025-04-18 10:46:55,996 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-18 06:47:16] 2025-04-18 10:46:55,996 | INFO     | summary of transferred files:
[2025-04-18 06:47:16] 2025-04-18 10:46:55,996 | INFO     |  -- lfn=log.44075483._065434.job.log.tgz.1, status_code=0, status=transferred
[2025-04-18 06:47:16] 2025-04-18 10:46:55,996 | INFO     | stage-out finished correctly
[2025-04-18 06:47:16] 2025-04-18 10:46:56,084 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-18 06:47:16] 2025-04-18 10:46:56,166 | INFO     | job 6606189406 has state=finished
[2025-04-18 06:47:16] 2025-04-18 10:46:56,166 | INFO     | preparing for final server update for job 6606189406 in state='finished'
[2025-04-18 06:47:16] 2025-04-18 10:46:56,167 | INFO     | this job has now completed (state=finished)
[2025-04-18 06:47:16] 2025-04-18 10:46:56,167 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-18 06:47:16] 2025-04-18 10:46:56,167 | INFO     | log transfer has been attempted: DONE
[2025-04-18 06:47:16] 2025-04-18 10:46:56,167 | INFO     | job 6606189406 has finished - writing final server update
[2025-04-18 06:47:16] 2025-04-18 10:46:56,167 | INFO     | total number of processed events: 400 (read)
[2025-04-18 06:47:16] 2025-04-18 10:46:56,169 | INFO     | executing command: lscpu
[2025-04-18 06:47:16] 2025-04-18 10:46:56,196 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-18 06:47:16] 2025-04-18 10:46:57,276 | WARNING  | process 18753 can no longer be monitored (due to stat problems) - aborting
[2025-04-18 06:47:16] 2025-04-18 10:46:57,277 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6606189406/memory_monitor_summary.json (trf name=prmon)
[2025-04-18 06:47:16] 2025-04-18 10:46:57,364 | INFO     | number of running child processes to parent process 18753: 1
[2025-04-18 06:47:16] 2025-04-18 10:46:57,364 | INFO     | maximum number of monitored processes: 6
[2025-04-18 06:47:16] 2025-04-18 10:46:59,867 | INFO     | monitor loop #375: job 0:6606189406 is in state 'finished'
[2025-04-18 06:47:16] 2025-04-18 10:46:59,867 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-18 06:47:16] 2025-04-18 10:47:02,136 | INFO     | CPU arch script returned: x86-64-v2
[2025-04-18 06:47:16] 2025-04-18 10:47:02,136 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6606189406/memory_monitor_summary.json (trf name=prmon)
[2025-04-18 06:47:16] 2025-04-18 10:47:02,137 | INFO     | extracted standard info from prmon json
[2025-04-18 06:47:16] 2025-04-18 10:47:02,137 | INFO     | extracted standard memory fields from prmon json
[2025-04-18 06:47:16] 2025-04-18 10:47:02,137 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-18 06:47:16] 2025-04-18 10:47:02,138 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-18 06:47:16] 2025-04-18 10:47:02,138 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-18 06:47:16] 2025-04-18 10:47:02,140 | INFO     | fitting pss+swap vs Time
[2025-04-18 06:47:16] 2025-04-18 10:47:02,140 | INFO     | sum of square deviations: 130793150.0
[2025-04-18 06:47:16] 2025-04-18 10:47:02,141 | INFO     | sum of deviations: 17262345592.0
[2025-04-18 06:47:16] 2025-04-18 10:47:02,141 | INFO     | mean x: 1744970796.0
[2025-04-18 06:47:16] 2025-04-18 10:47:02,141 | INFO     | mean y: 2625772.0933333333
[2025-04-18 06:47:16] 2025-04-18 10:47:02,141 | INFO     | -- intersect: -230302164107.9526
[2025-04-18 06:47:16] 2025-04-18 10:47:02,141 | INFO     | intersect: -230302164107.9526
[2025-04-18 06:47:16] 2025-04-18 10:47:02,141 | INFO     | chi2: 2.3715360679273507
[2025-04-18 06:47:16] 2025-04-18 10:47:02,142 | INFO     | -- intersect: -230302164107.9526
[2025-04-18 06:47:16] 2025-04-18 10:47:02,142 | INFO     | current memory leak: 131.98 B/s (using 75 data points, chi2=2.37)
[2025-04-18 06:47:16] 2025-04-18 10:47:02,142 | INFO     | ..............................
[2025-04-18 06:47:16] 2025-04-18 10:47:02,142 | INFO     | . Timing measurements:
[2025-04-18 06:47:16] 2025-04-18 10:47:02,142 | INFO     | . get job = 0 s
[2025-04-18 06:47:16] 2025-04-18 10:47:02,142 | INFO     | . initial setup = 2 s
[2025-04-18 06:47:16] 2025-04-18 10:47:02,142 | INFO     | . payload setup = 8 s
[2025-04-18 06:47:16] 2025-04-18 10:47:02,143 | INFO     | . stage-in = 0 s
[2025-04-18 06:47:16] 2025-04-18 10:47:02,143 | INFO     | . payload execution = 4982 s
[2025-04-18 06:47:16] 2025-04-18 10:47:02,143 | INFO     | . stage-out = 0 s
[2025-04-18 06:47:16] 2025-04-18 10:47:02,143 | INFO     | . log creation = 0 s
[2025-04-18 06:47:16] 2025-04-18 10:47:02,143 | INFO     | ..............................
[2025-04-18 06:47:16] 2025-04-18 10:47:02,226 | INFO     | 
[2025-04-18 06:47:16] 2025-04-18 10:47:02,227 | INFO     | job summary report
[2025-04-18 06:47:16] 2025-04-18 10:47:02,227 | INFO     | --------------------------------------------------
[2025-04-18 06:47:16] 2025-04-18 10:47:02,227 | INFO     | PanDA job id: 6606189406
[2025-04-18 06:47:16] 2025-04-18 10:47:02,227 | INFO     | task id: 44075483
[2025-04-18 06:47:16] 2025-04-18 10:47:02,227 | INFO     | errors: (none)
[2025-04-18 06:47:16] 2025-04-18 10:47:02,228 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-18 06:47:16] 2025-04-18 10:47:02,228 | INFO     | pilot state: finished 
[2025-04-18 06:47:16] 2025-04-18 10:47:02,228 | INFO     | transexitcode: 0
[2025-04-18 06:47:16] 2025-04-18 10:47:02,228 | INFO     | exeerrorcode: 0
[2025-04-18 06:47:16] 2025-04-18 10:47:02,228 | INFO     | exeerrordiag: 
[2025-04-18 06:47:16] 2025-04-18 10:47:02,228 | INFO     | exitcode: 0
[2025-04-18 06:47:16] 2025-04-18 10:47:02,229 | INFO     | exitmsg: OK
[2025-04-18 06:47:16] 2025-04-18 10:47:02,229 | INFO     | cpuconsumptiontime: 46634 s
[2025-04-18 06:47:16] 2025-04-18 10:47:02,229 | INFO     | nevents: 400
[2025-04-18 06:47:16] 2025-04-18 10:47:02,229 | INFO     | neventsw: 0
[2025-04-18 06:47:16] 2025-04-18 10:47:02,229 | INFO     | pid: 18753
[2025-04-18 06:47:16] 2025-04-18 10:47:02,229 | INFO     | pgrp: 18753
[2025-04-18 06:47:16] 2025-04-18 10:47:02,229 | INFO     | corecount: 12
[2025-04-18 06:47:16] 2025-04-18 10:47:02,229 | INFO     | event service: False
[2025-04-18 06:47:16] 2025-04-18 10:47:02,229 | INFO     | sizes: {0: 2426824, 5: 2427030, 11: 2427086, 4993: 2453235, 4995: 2462232, 5001: 2462346}
[2025-04-18 06:47:16] 2025-04-18 10:47:02,229 | INFO     | --------------------------------------------------
[2025-04-18 06:47:16] 2025-04-18 10:47:02,230 | INFO     | 
[2025-04-18 06:47:16] 2025-04-18 10:47:02,230 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-18 06:47:16] 2025-04-18 10:47:02,253 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-18 06:47:16] 2025-04-18 10:47:02,254 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-18 06:47:16] 2025-04-18 10:47:02,254 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-18 06:47:16] 2025-04-18 10:47:02,254 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-18 06:47:16] 2025-04-18 10:47:02,254 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-18 06:47:16] 2025-04-18 10:47:02,254 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-18 06:47:16] 2025-04-18 10:47:02,255 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-18 06:47:16] 2025-04-18 10:47:02,255 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-18 06:47:16] 2025-04-18 10:47:02,255 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-18 06:47:16] 2025-04-18 10:47:02,255 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-18 06:47:16] 2025-04-18 10:47:02,255 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-18 06:47:16] 2025-04-18 10:47:02,255 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-18 06:47:16] 2025-04-18 10:47:02,256 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-18 06:47:16] 2025-04-18 10:47:02,256 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-18 06:47:16] 2025-04-18 10:47:02,256 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-18 06:47:16] 2025-04-18 10:47:02,256 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-18 06:47:16] 2025-04-18 10:47:02,256 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-18 06:47:16] 2025-04-18 10:47:02,257 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-18 06:47:16] 2025-04-18 10:47:02,257 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-18 06:47:16] 2025-04-18 10:47:02,257 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-18 06:47:16] 2025-04-18 10:47:02,257 | INFO     | job 6606189406 has completed (purged errors)
[2025-04-18 06:47:16] 2025-04-18 10:47:02,257 | INFO     | overall cleanup function is called
[2025-04-18 06:47:16] 2025-04-18 10:47:03,265 | INFO     | --- collectZombieJob: --- 10, [18753]
[2025-04-18 06:47:16] 2025-04-18 10:47:03,266 | INFO     | zombie collector waiting for pid 18753
[2025-04-18 06:47:16] 2025-04-18 10:47:03,266 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-18 06:47:16] 2025-04-18 10:47:03,266 | INFO     | collected zombie processes
[2025-04-18 06:47:16] 2025-04-18 10:47:03,266 | INFO     | will attempt to kill all subprocesses of pid=18753
[2025-04-18 06:47:16] 2025-04-18 10:47:03,354 | INFO     | process IDs to be killed: [18753] (in reverse order)
[2025-04-18 06:47:16] 2025-04-18 10:47:03,406 | WARNING  | found no corresponding commands to process id(s)
[2025-04-18 06:47:16] 2025-04-18 10:47:03,407 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-18 06:47:16] 2025-04-18 10:47:03,410 | INFO     | did not find any defunct processes belonging to 18753
[2025-04-18 06:47:16] 2025-04-18 10:47:03,412 | INFO     | did not find any defunct processes belonging to 18753
[2025-04-18 06:47:16] 2025-04-18 10:47:03,412 | INFO     | ready for new job
[2025-04-18 06:47:16] 2025-04-18 10:47:03,413 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-18 06:47:16] 2025-04-18 10:47:03,414 | INFO     | **************************************
[2025-04-18 06:47:16] 2025-04-18 10:47:03,414 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-18 06:47:16] 2025-04-18 10:47:03,414 | INFO     | **************************************
[2025-04-18 06:47:16] 2025-04-18 10:47:03,414 | INFO     | 
[2025-04-18 06:47:16] 2025-04-18 10:47:03,414 | INFO     | architecture information:
[2025-04-18 06:47:16] 2025-04-18 10:47:03,415 | INFO     | executing command: cat /etc/os-release
[2025-04-18 06:47:16] 2025-04-18 10:47:03,430 | INFO     | cat /etc/os-release:
[2025-04-18 06:47:16] NAME="CentOS Linux"
[2025-04-18 06:47:16] VERSION="7 (Core)"
[2025-04-18 06:47:16] ID="centos"
[2025-04-18 06:47:16] ID_LIKE="rhel fedora"
[2025-04-18 06:47:16] VERSION_ID="7"
[2025-04-18 06:47:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-18 06:47:16] ANSI_COLOR="0;31"
[2025-04-18 06:47:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-18 06:47:16] HOME_URL="https://www.centos.org/"
[2025-04-18 06:47:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-18 06:47:16] 
[2025-04-18 06:47:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-18 06:47:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-18 06:47:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-18 06:47:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-18 06:47:16] 
[2025-04-18 06:47:16] 2025-04-18 10:47:03,430 | INFO     | **************************************
[2025-04-18 06:47:16] 2025-04-18 10:47:03,933 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-18 06:47:16] 2025-04-18 10:47:03,950 | INFO     | sufficient remaining disk space (29395779584 B)
[2025-04-18 06:47:16] 2025-04-18 10:47:03,950 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-18 06:47:16] 2025-04-18 10:47:03,951 | INFO     | current server update state: UPDATING_FINAL
[2025-04-18 06:47:16] 2025-04-18 10:47:03,951 | INFO     | update_server=False
[2025-04-18 06:47:16] 2025-04-18 10:47:03,951 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-18 06:47:16] 2025-04-18 10:47:03,951 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-18 06:47:16] 2025-04-18 10:47:03,952 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-18 06:47:16] 2025-04-18 10:47:03,952 | INFO     | aborting loop
[2025-04-18 06:47:16] 2025-04-18 10:47:03,983 | INFO     | all payload control threads have been joined
[2025-04-18 06:47:16] 2025-04-18 10:47:04,012 | INFO     | found 0 job(s) in 20 queues
[2025-04-18 06:47:16] 2025-04-18 10:47:04,012 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-18 06:47:16] 2025-04-18 10:47:04,013 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-18 06:47:16] 2025-04-18 10:47:04,094 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-18 06:47:16] 2025-04-18 10:47:04,403 | INFO     | all data control threads have been joined
[2025-04-18 06:47:16] 2025-04-18 10:47:04,476 | INFO     | all job control threads have been joined
[2025-04-18 06:47:16] 2025-04-18 10:47:04,953 | INFO     | [job] retrieve thread has finished
[2025-04-18 06:47:16] 2025-04-18 10:47:04,957 | INFO     | [job] job monitor thread has finished
[2025-04-18 06:47:16] 2025-04-18 10:47:04,957 | INFO     | [job] queue monitor thread has finished
[2025-04-18 06:47:16] 2025-04-18 10:47:04,988 | INFO     | [payload] control thread has finished
[2025-04-18 06:47:16] 2025-04-18 10:47:05,233 | INFO     | [payload] execute_payloads thread has finished
[2025-04-18 06:47:16] 2025-04-18 10:47:05,409 | INFO     | [data] control thread has finished
[2025-04-18 06:47:16] 2025-04-18 10:47:05,482 | INFO     | [job] control thread has finished
[2025-04-18 06:47:16] 2025-04-18 10:47:05,509 | INFO     | [job] validate thread has finished
[2025-04-18 06:47:16] 2025-04-18 10:47:05,764 | INFO     | [job] create_data_payload thread has finished
[2025-04-18 06:47:16] 2025-04-18 10:47:05,892 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-18 06:47:16] 2025-04-18 10:47:06,028 | INFO     | [payload] validate_post thread has finished
[2025-04-18 06:47:16] 2025-04-18 10:47:06,051 | INFO     | [payload] validate_pre thread has finished
[2025-04-18 06:47:16] 2025-04-18 10:47:06,099 | INFO     | [data] copytool_out thread has finished
[2025-04-18 06:47:16] 2025-04-18 10:47:06,161 | INFO     | [payload] failed_post thread has finished
[2025-04-18 06:47:16] 2025-04-18 10:47:06,323 | INFO     | [data] copytool_in thread has finished
[2025-04-18 06:47:16] 2025-04-18 10:47:06,679 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-18 06:47:16] 2025-04-18 10:47:10,685 | INFO     | [data] queue_monitor thread has finished
[2025-04-18 06:47:16] 2025-04-18 10:47:11,101 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140467943900992)>', '<ExcThread(monitor, started 140467215779584)>']
[2025-04-18 06:47:16] 2025-04-18 10:47:12,051 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-18 06:47:16] 2025-04-18 10:47:12,051 | INFO     | [monitor] control thread has ended
[2025-04-18 06:47:16] 2025-04-18 10:47:16,112 | INFO     | all workflow threads have been joined
[2025-04-18 06:47:16] 2025-04-18 10:47:16,127 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-18 06:47:16] 2025-04-18 10:47:16,127 | INFO     | traces error code: 0
[2025-04-18 06:47:16] 2025-04-18 10:47:16,127 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-18 06:47:16] 2025-04-18 10:47:16,210 [wrapper] ==== pilot stdout END ====
[2025-04-18 06:47:16] 2025-04-18 10:47:16,213 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-18 06:47:16] 2025-04-18 10:47:16,217 [wrapper] pilotpid: 12397
[2025-04-18 06:47:16] 2025-04-18 10:47:16,221 [wrapper] Pilot exit status: 0
[2025-04-18 06:47:16] 2025-04-18 10:47:16,236 [wrapper] pandaids: 6606189406
[2025-04-18 06:47:16] 2025-04-18 10:47:16,275 [wrapper] cleanup supervisor_pilot 32232 12398
[2025-04-18 06:47:16] 2025-04-18 10:47:16,279 [wrapper] Test setup, not cleaning
[2025-04-18 06:47:16] 2025-04-18 10:47:16,283 [wrapper] apfmon messages muted
[2025-04-18 06:47:16] 2025-04-18 10:47:16,287 [wrapper] ==== wrapper stdout END ====
[2025-04-18 06:47:16] 2025-04-18 10:47:16,291 [wrapper] ==== wrapper stderr END ====
[2025-04-18 06:47:16]  *** Error codes and diagnostics ***
[2025-04-18 06:47:16]     "exeErrorCode": 0,
[2025-04-18 06:47:16]     "exeErrorDiag": "",
[2025-04-18 06:47:16]     "pilotErrorCode": 0,
[2025-04-18 06:47:16]     "pilotErrorDiag": "",
[2025-04-18 06:47:16]  *** Listing of results directory ***
[2025-04-18 06:47:16] total 415636
[2025-04-18 06:47:16] -rw-r--r-- 1 boincer umatlas    495897 Apr 18 02:15 pilot3.tar.gz
[2025-04-18 06:47:16] -rwx------ 1 boincer umatlas     37140 Apr 18 02:27 runpilot2-wrapper.sh
[2025-04-18 06:47:16] -rw-r--r-- 1 boincer umatlas      5111 Apr 18 02:27 queuedata.json
[2025-04-18 06:47:16] -rw-r--r-- 1 boincer umatlas       100 Apr 18 05:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-18 06:47:16] -rwxr-xr-x 1 boincer umatlas      7986 Apr 18 05:23 run_atlas
[2025-04-18 06:47:16] -rw-r--r-- 1 boincer umatlas       105 Apr 18 05:23 job.xml
[2025-04-18 06:47:16] -rw-r--r-- 2 boincer umatlas 225208446 Apr 18 05:23 EVNT.44075481._002543.pool.root.1
[2025-04-18 06:47:16] -rw-r--r-- 2 boincer umatlas     17569 Apr 18 05:23 start_atlas.sh
[2025-04-18 06:47:16] drwxrwx--x 2 boincer umatlas      4096 Apr 18 05:23 shared
[2025-04-18 06:47:16] -rw-r--r-- 2 boincer umatlas    508894 Apr 18 05:23 input.tar.gz
[2025-04-18 06:47:16] -rw-r--r-- 1 boincer umatlas         0 Apr 18 05:23 boinc_lockfile
[2025-04-18 06:47:16] -rw-r--r-- 1 boincer umatlas      2579 Apr 18 05:23 pandaJob.out
[2025-04-18 06:47:16] -rw------- 1 boincer umatlas       424 Apr 18 05:23 setup.sh.local
[2025-04-18 06:47:16] -rw------- 1 boincer umatlas    990242 Apr 18 05:23 agis_schedconf.cvmfs.json
[2025-04-18 06:47:16] -rw------- 1 boincer umatlas   1618536 Apr 18 05:23 agis_ddmendpoints.agis.ALL.json
[2025-04-18 06:47:16] drwx------ 4 boincer umatlas      4096 Apr 18 05:23 pilot3
[2025-04-18 06:47:16] -rw-r--r-- 1 boincer umatlas      5868 Apr 18 06:45 init_data.xml
[2025-04-18 06:47:16] -rw------- 1 boincer umatlas 194843058 Apr 18 06:46 HITS.44075483._065434.pool.root.1
[2025-04-18 06:47:16] -rw------- 1 boincer umatlas        95 Apr 18 06:46 pilot_heartbeat.json
[2025-04-18 06:47:16] -rw-r--r-- 1 boincer umatlas       529 Apr 18 06:46 boinc_task_state.xml
[2025-04-18 06:47:16] -rw------- 1 boincer umatlas      1047 Apr 18 06:46 memory_monitor_summary.json
[2025-04-18 06:47:16] -rw------- 1 boincer umatlas    369940 Apr 18 06:46 log.44075483._065434.job.log.tgz.1
[2025-04-18 06:47:16] -rw-r--r-- 1 boincer umatlas      8192 Apr 18 06:47 boinc_mmap_file
[2025-04-18 06:47:16] -rw------- 1 boincer umatlas      7754 Apr 18 06:47 heartbeat.json
[2025-04-18 06:47:16] -rw-r--r-- 1 boincer umatlas        27 Apr 18 06:47 wrapper_checkpoint.txt
[2025-04-18 06:47:16] -rw------- 1 boincer umatlas      4353 Apr 18 06:47 pilotlog.txt
[2025-04-18 06:47:16] -rw------- 1 boincer umatlas    476536 Apr 18 06:47 log.44075483._065434.job.log.1
[2025-04-18 06:47:16] -rw------- 1 boincer umatlas       357 Apr 18 06:47 output.list
[2025-04-18 06:47:16] -rw-r--r-- 1 boincer umatlas       620 Apr 18 06:47 runtime_log
[2025-04-18 06:47:16] -rw------- 1 boincer umatlas    870400 Apr 18 06:47 result.tar.gz
[2025-04-18 06:47:16] -rw-r--r-- 1 boincer umatlas     11015 Apr 18 06:47 runtime_log.err
[2025-04-18 06:47:16] -rw------- 1 boincer umatlas       658 Apr 18 06:47 06kMDmVNuP7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmYq4KDmR4sfRn.diag
[2025-04-18 06:47:16] -rw-r--r-- 1 boincer umatlas     21366 Apr 18 06:47 stderr.txt
[2025-04-18 06:47:16] HITS file was successfully produced:
[2025-04-18 06:47:16] -rw------- 1 boincer umatlas 194843058 Apr 18 06:46 shared/HITS.pool.root.1
[2025-04-18 06:47:16]  *** Contents of shared directory: ***
[2025-04-18 06:47:16] total 411584
[2025-04-18 06:47:16] -rw-r--r-- 2 boincer umatlas 225208446 Apr 18 05:23 ATLAS.root_0
[2025-04-18 06:47:16] -rw-r--r-- 2 boincer umatlas     17569 Apr 18 05:23 start_atlas.sh
[2025-04-18 06:47:16] -rw-r--r-- 2 boincer umatlas    508894 Apr 18 05:23 input.tar.gz
[2025-04-18 06:47:16] -rw------- 1 boincer umatlas 194843058 Apr 18 06:46 HITS.pool.root.1
[2025-04-18 06:47:16] -rw------- 1 boincer umatlas    870400 Apr 18 06:47 result.tar.gz
06:47:17 (8774): run_atlas exited; CPU time 46615.719247
06:47:17 (8774): called boinc_finish(0)

</stderr_txt>
]]>

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