Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-04-18 16:25:51 (23384): Detected: vboxwrapper 26206
2025-04-18 16:25:51 (23384): Detected: BOINC client v8.0.4
2025-04-18 16:25:52 (23384): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2025-04-18 16:25:52 (23384): Successfully copied 'init_data.xml' to the shared directory.
2025-04-18 16:25:53 (23384): Create VM. (boinc_abe00818d90410b8, slot#0)
2025-04-18 16:25:54 (23384): Setting Memory Size for VM. (4700MB)
2025-04-18 16:25:54 (23384): Setting CPU Count for VM. (7)
2025-04-18 16:25:54 (23384): Setting Chipset Options for VM.
2025-04-18 16:25:54 (23384): Setting Graphics Controller Options for VM.
2025-04-18 16:25:55 (23384): Setting Boot Options for VM.
2025-04-18 16:25:55 (23384): Setting Network Configuration for NAT.
2025-04-18 16:25:55 (23384): Enabling VM Network Access.
2025-04-18 16:25:55 (23384): Disabling USB Support for VM.
2025-04-18 16:25:56 (23384): Disabling COM Port Support for VM.
2025-04-18 16:25:56 (23384): Disabling LPT Port Support for VM.
2025-04-18 16:25:56 (23384): Disabling Audio Support for VM.
2025-04-18 16:25:57 (23384): Disabling Clipboard Support for VM.
2025-04-18 16:25:57 (23384): Disabling Drag and Drop Support for VM.
2025-04-18 16:25:57 (23384): Adding storage controller(s) to VM.
2025-04-18 16:25:57 (23384): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-04-18 16:26:00 (23384): Adding VirtualBox Guest Additions to VM.
2025-04-18 16:26:00 (23384): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-04-18 16:26:01 (23384): forwarding host port 51349 to guest port 80
2025-04-18 16:26:01 (23384): Enabling remote desktop for VM.
2025-04-18 16:26:01 (23384): Required extension pack not installed, remote desktop not enabled.
2025-04-18 16:26:01 (23384): Enabling shared directory for VM.
2025-04-18 16:26:02 (23384): Starting VM using VBoxManage interface. (boinc_abe00818d90410b8, slot#0)
2025-04-18 16:26:07 (23384): Successfully started VM. (PID = '11296')
2025-04-18 16:26:07 (23384): Reporting VM Process ID to BOINC.
2025-04-18 16:26:07 (23384): Guest Log: BIOS: VirtualBox 7.0.6
2025-04-18 16:26:07 (23384): Guest Log: CPUID EDX: 0x178bfbff
2025-04-18 16:26:07 (23384): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-04-18 16:26:07 (23384): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-04-18 16:26:07 (23384): VM state change detected. (old = 'poweredoff', new = 'running')
2025-04-18 16:26:07 (23384): Detected: Web Application Enabled (http://localhost:51349)
2025-04-18 16:26:07 (23384): Preference change detected
2025-04-18 16:26:07 (23384): Setting CPU throttle for VM. (80%)
2025-04-18 16:26:08 (23384): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 180 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-18 16:26:10 (23384): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-04-18 16:26:10 (23384): Guest Log: BIOS: Booting from Hard Disk...
2025-04-18 16:26:13 (23384): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-04-18 16:26:13 (23384): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-04-18 16:26:13 (23384): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-04-18 16:26:13 (23384): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-04-18 16:26:13 (23384): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-04-18 16:26:13 (23384): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-04-18 16:26:13 (23384): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-04-18 16:26:13 (23384): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-04-18 16:26:13 (23384): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-04-18 16:26:13 (23384): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-04-18 16:26:13 (23384): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-04-18 16:26:13 (23384): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-04-18 16:26:13 (23384): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-04-18 16:26:13 (23384): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-04-18 16:26:13 (23384): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-04-18 16:26:13 (23384): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-04-18 16:26:13 (23384): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-04-18 16:26:13 (23384): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-04-18 16:26:13 (23384): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-04-18 16:26:13 (23384): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-04-18 16:26:13 (23384): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-04-18 16:26:13 (23384): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-04-18 16:26:13 (23384): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-04-18 16:26:13 (23384): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-04-18 16:26:13 (23384): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-04-18 16:26:13 (23384): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-04-18 16:26:13 (23384): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-04-18 16:26:13 (23384): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-04-18 16:26:13 (23384): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-04-18 16:26:13 (23384): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-04-18 16:26:13 (23384): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-04-18 16:26:13 (23384): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-04-18 16:26:25 (23384): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-04-18 16:26:25 (23384): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-04-18 16:26:37 (23384): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-04-18 16:26:37 (23384): Guest Log: 00:00:00.000090 main     Log opened 2025-04-18T16:26:35.039370000Z
2025-04-18 16:26:37 (23384): Guest Log: 00:00:00.000164 main     OS Product: Linux
2025-04-18 16:26:37 (23384): Guest Log: 00:00:00.000202 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-04-18 16:26:37 (23384): Guest Log: 00:00:00.000229 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-04-18 16:26:37 (23384): Guest Log: 00:00:00.000253 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-04-18 16:26:37 (23384): Guest Log: 00:00:00.000254 main     Process ID: 1352
2025-04-18 16:26:37 (23384): Guest Log: 00:00:00.000255 main     Package type: LINUX_64BITS_GENERIC
2025-04-18 16:26:37 (23384): Guest Log: 00:00:00.002000 main     5.2.32 r132073 started. Verbose level = 0
2025-04-18 16:26:38 (23384): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-04-18 16:26:38 (23384): Guest Log: [INFO] Mounting shared directory
2025-04-18 16:26:38 (23384): Guest Log: [INFO] Checking for init_data.xml
2025-04-18 16:26:41 (23384): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-04-18 16:26:41 (23384): Guest Log: [INFO] Detected branch: prod
2025-04-18 16:26:41 (23384): Guest Log: This is the prod version of the ATLAS job wrapper
2025-04-18 16:26:41 (23384): Guest Log: Copying input files
2025-04-18 16:26:42 (23384): Guest Log: Copied input files into RunAtlas.
2025-04-18 16:26:42 (23384): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-04-18 16:26:42 (23384): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-04-18 16:26:42 (23384): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-04-18 16:26:42 (23384): Guest Log: Further information can be found at the LHC@home message board.
2025-04-18 16:26:47 (23384): Guest Log: 00:00:10.057541 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 588 171 984 000ns (GuestNow=1 744 990 006 870 405 000 ns GuestLast=1 744 993 595 042 389 000 ns fSetTimeLastLoop=true )
2025-04-18 16:26:53 (23384): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-04-18 16:26:53 (23384): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-04-18 16:26:53 (23384): Guest Log: 2.6.3.0 1626 0 30172 145007 4 1 3117322 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-04-18 16:27:02 (23384): Guest Log: copied the webapp to /var/www
2025-04-18 16:27:02 (23384): Guest Log: ATHENA_PROC_NUMBER=7
2025-04-18 16:27:02 (23384): Guest Log: ATHENA_CORE_NUMBER=7
2025-04-18 16:27:03 (23384): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-04-18 16:27:03 (23384): Guest Log:  *** Starting ATLAS job. (PandaID=6606189383 taskID=44075483) ***
2025-04-18 17:37:21 (23384): Guest Log:  *** Job finished ***
2025-04-18 17:37:21 (23384): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-18 17:37:21 (23384): Guest Log: 2025-04-18 16:37:06,501 | INFO     | [data] queue_monitor thread has finished
2025-04-18 17:37:21 (23384): Guest Log: 2025-04-18 16:37:09,942 | INFO     | job.realtimelogging is not enabled
2025-04-18 17:37:21 (23384): Guest Log: 2025-04-18 16:37:10,967 | INFO     | [payload] run_realtimelog thread has finished
2025-04-18 17:37:21 (23384): Guest Log: 2025-04-18 16:37:12,777 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140169094154048)>', '<ExcThread(monitor, started 140168044463872)>']
2025-04-18 17:37:21 (23384): Guest Log: 2025-04-18 16:37:13,008 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-18 17:37:21 (23384): Guest Log: 2025-04-18 16:37:13,009 | INFO     | [monitor] control thread has ended
2025-04-18 17:37:21 (23384): Guest Log: 2025-04-18 16:37:17,800 | INFO     | all workflow threads have been joined
2025-04-18 17:37:21 (23384): Guest Log: 2025-04-18 16:37:17,800 | INFO     | end of generic workflow (traces error code: 0)
2025-04-18 17:37:21 (23384): Guest Log: 2025-04-18 16:37:17,801 | INFO     | traces error code: 0
2025-04-18 17:37:21 (23384): Guest Log: 2025-04-18 16:37:17,801 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-18 17:37:21 (23384): Guest Log: 2025-04-18 16:37:17,902 [wrapper] ==== pilot stdout END ====
2025-04-18 17:37:21 (23384): Guest Log: 2025-04-18 16:37:17,905 [wrapper] ==== wrapper stdout RESUME ====
2025-04-18 17:37:21 (23384): Guest Log: 2025-04-18 16:37:17,908 [wrapper] pilotpid: 5974
2025-04-18 17:37:21 (23384): Guest Log: 2025-04-18 16:37:17,911 [wrapper] Pilot exit status: 0
2025-04-18 17:37:21 (23384): Guest Log: 2025-04-18 16:37:18,022 [wrapper] pandaids: 6606189383
2025-04-18 17:37:21 (23384): Guest Log: 2025-04-18 16:37:18,048 [wrapper] cleanup supervisor_pilot 30224 5975
2025-04-18 17:37:21 (23384): Guest Log: 2025-04-18 16:37:18,052 [wrapper] Test setup, not cleaning
2025-04-18 17:37:21 (23384): Guest Log: 2025-04-18 16:37:18,056 [wrapper] apfmon messages muted
2025-04-18 17:37:21 (23384): Guest Log: 2025-04-18 16:37:18,059 [wrapper] ==== wrapper stdout END ====
2025-04-18 17:37:21 (23384): Guest Log: 2025-04-18 16:37:18,062 [wrapper] ==== wrapper stderr END ====
2025-04-18 17:37:21 (23384): Guest Log:  *** Error codes and diagnostics ***
2025-04-18 17:37:21 (23384): Guest Log:     "exeErrorCode": 0,
2025-04-18 17:37:21 (23384): Guest Log:     "exeErrorDiag": "",
2025-04-18 17:37:21 (23384): Guest Log:     "pilotErrorCode": 0,
2025-04-18 17:37:21 (23384): Guest Log:     "pilotErrorDiag": "",
2025-04-18 17:37:21 (23384): Guest Log:  *** Listing of results directory ***
2025-04-18 17:37:21 (23384): Guest Log: total 199320
2025-04-18 17:37:21 (23384): Guest Log: -rw-r--r--. 1 atlas atlas    495897 Apr 18 06:15 pilot3.tar.gz
2025-04-18 17:37:21 (23384): Guest Log: -rwx------. 1 atlas atlas     37140 Apr 18 06:26 runpilot2-wrapper.sh
2025-04-18 17:37:21 (23384): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Apr 18 06:26 queuedata.json
2025-04-18 17:37:21 (23384): Guest Log: -rwxr-xr-x. 1 atlas atlas      9059 Apr 18 15:26 init_data.xml
2025-04-18 17:37:21 (23384): Guest Log: -rwxr-xr-x. 1 atlas atlas    508892 Apr 18 15:26 input.tar.gz
2025-04-18 17:37:21 (23384): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 Apr 18 15:26 start_atlas.sh
2025-04-18 17:37:21 (23384): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr 18 15:26 EVNT.44075481._002542.pool.root.1 -> /data/./ATLAS.root_0
2025-04-18 17:37:21 (23384): Guest Log: -rw-r--r--. 1 atlas atlas      2579 Apr 18 15:27 pandaJob.out
2025-04-18 17:37:21 (23384): Guest Log: -rw-------. 1 atlas atlas       424 Apr 18 15:27 setup.sh.local
2025-04-18 17:37:21 (23384): Guest Log: -rw-------. 1 atlas atlas    990596 Apr 18 15:27 agis_schedconf.cvmfs.json
2025-04-18 17:37:21 (23384): Guest Log: -rw-------. 1 atlas atlas   1618536 Apr 18 15:27 agis_ddmendpoints.agis.ALL.json
2025-04-18 17:37:21 (23384): Guest Log: drwx------. 4 atlas atlas      4096 Apr 18 15:28 pilot3
2025-04-18 17:37:21 (23384): Guest Log: -rw-------. 1 atlas atlas 198974878 Apr 18 16:36 HITS.44075483._065411.pool.root.1
2025-04-18 17:37:21 (23384): Guest Log: -rw-------. 1 atlas atlas        95 Apr 18 16:36 pilot_heartbeat.json
2025-04-18 17:37:21 (23384): Guest Log: -rw-------. 1 atlas atlas      1045 Apr 18 16:36 memory_monitor_summary.json
2025-04-18 17:37:21 (23384): Guest Log: -rw-------. 1 atlas atlas    287429 Apr 18 16:36 log.44075483._065411.job.log.tgz.1
2025-04-18 17:37:21 (23384): Guest Log: -rw-------. 1 atlas atlas      7732 Apr 18 16:36 heartbeat.json
2025-04-18 17:37:21 (23384): Guest Log: -rw-------. 1 atlas atlas      4485 Apr 18 16:37 pilotlog.txt
2025-04-18 17:37:21 (23384): Guest Log: -rw-------. 1 atlas atlas    378462 Apr 18 16:37 log.44075483._065411.job.log.1
2025-04-18 17:37:21 (23384): Guest Log: -rw-------. 1 atlas atlas       357 Apr 18 16:37 output.list
2025-04-18 17:37:21 (23384): Guest Log: -rw-r--r--. 1 atlas atlas       620 Apr 18 16:37 runtime_log
2025-04-18 17:37:21 (23384): Guest Log: -rw-------. 1 atlas atlas    686080 Apr 18 16:37 result.tar.gz
2025-04-18 17:37:21 (23384): Guest Log: -rw-------. 1 atlas atlas       664 Apr 18 16:37 ZQtLDmWMuP7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmBq4KDmO0LIZn.diag
2025-04-18 17:37:21 (23384): Guest Log: -rw-r--r--. 1 atlas atlas     10974 Apr 18 16:37 runtime_log.err
2025-04-18 17:37:21 (23384): Guest Log: Looking for outputfile HITS.44075483._065411.pool.root.1
2025-04-18 17:37:21 (23384): Guest Log: HITS file was successfully produced
2025-04-18 17:37:21 (23384): Guest Log: -rw-------. 1 atlas atlas 198974878 Apr 18 16:36 /home/atlas/RunAtlas/HITS.44075483._065411.pool.root.1
2025-04-18 17:37:22 (23384): Guest Log: Successfully finished the ATLAS job!
2025-04-18 17:37:22 (23384): Guest Log: Copying the results back to the shared directory!
2025-04-18 17:37:22 (23384): Guest Log:  *** Contents of shared directory: ***
2025-04-18 17:37:22 (23384): Guest Log: total 412776
2025-04-18 17:37:22 (23384): Guest Log: -rwxrwxrwx. 1 root root 222472043 Apr 18 15:25 ATLAS.root_0
2025-04-18 17:37:22 (23384): Guest Log: -rwxrwxrwx. 1 root root 198974878 Apr 18 16:37 HITS.pool.root.1
2025-04-18 17:37:22 (23384): Guest Log: -rwxrwxrwx. 1 root root      9059 Apr 18 15:25 init_data.xml
2025-04-18 17:37:22 (23384): Guest Log: -rwxrwxrwx. 1 root root    508892 Apr 18 09:09 input.tar.gz
2025-04-18 17:37:22 (23384): Guest Log: -rwxrwxrwx. 1 root root    686080 Apr 18 16:37 result.tar.gz
2025-04-18 17:37:22 (23384): Guest Log: -rwxrwxrwx. 1 root root     17569 Apr 18 09:09 start_atlas.sh
2025-04-18 17:37:22 (23384): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-18 17:37:22 (23384): VM Completion File Detected.
2025-04-18 17:37:22 (23384): Powering off VM.
2025-04-18 17:37:23 (23384): Successfully stopped VM.
2025-04-18 17:37:23 (23384): Deregistering VM. (boinc_abe00818d90410b8, slot#0)
2025-04-18 17:37:23 (23384): Removing network bandwidth throttle group from VM.
2025-04-18 17:37:23 (23384): Removing VM from VirtualBox.
17:37:28 (23384): called boinc_finish(0)

</stderr_txt>
]]>

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