Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
20:33:59 (867226): wrapper (7.7.26015): starting
20:33:59 (867226): wrapper: running run_atlas (--nthreads 3)
[2025-04-18 20:33:59] Arguments: --nthreads 3
[2025-04-18 20:33:59] Threads: 3
[2025-04-18 20:33:59] Checking for CVMFS
[2025-04-18 20:33:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-18 20:33:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-18 20:33:59] Running cvmfs_config stat atlas.cern.ch
[2025-04-18 20:34:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-18 20:34:00] 2.9.2.0 2933 3642 85716 145012 1 56 23701673 36864001 0 130560 0 2248772 99.989 860707 10702 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-04-18 20:34:00] CVMFS is ok
[2025-04-18 20:34:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-18 20:34:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-18 20:34:00] Further information can be found at the LHC@home message board.
[2025-04-18 20:34:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-18 20:34:00] Checking for apptainer binary...
[2025-04-18 20:34:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-18 20:34:00] Running /usr/bin/apptainer --version
[2025-04-18 20:34:00] apptainer version 1.3.6-6.1
[2025-04-18 20:34:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-18 20:34:00] belleA253
[2025-04-18 20:34:00] apptainer works
[2025-04-18 20:34:00] Set ATHENA_PROC_NUMBER=3
[2025-04-18 20:34:00] Set ATHENA_CORE_NUMBER=3
[2025-04-18 20:34:00] Starting ATLAS job with PandaID=6606188482
[2025-04-18 20:34:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-18 22:06:34]  *** The last 200 lines of the pilot log: ***
[2025-04-18 22:06:34]  filetype=log
[2025-04-18 22:06:34]  guid=7742415d-65b0-43cf-9e52-f66092a9ba2e
[2025-04-18 22:06:34]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-04-18 22:06:34]  is_altstaged=None
[2025-04-18 22:06:34]  is_tar=False
[2025-04-18 22:06:34]  lfn=log.44075483._065291.job.log.tgz.1
[2025-04-18 22:06:34]  mtime=0
[2025-04-18 22:06:34]  protocol_id=None
[2025-04-18 22:06:34]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-18 22:06:34]  replicas=None
[2025-04-18 22:06:34]  scope=mc23_13p6TeV
[2025-04-18 22:06:34]  status=None
[2025-04-18 22:06:34]  status_code=0
[2025-04-18 22:06:34]  storage_token=
[2025-04-18 22:06:34]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6606188482/log.44075483._065291.job.log.tgz.1
[2025-04-18 22:06:34]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/32/2f/log.44075483._065291.job.log.tgz.1
[2025-04-18 22:06:34]  workdir=None
[2025-04-18 22:06:34] ]
[2025-04-18 22:06:34] 2025-04-18 20:05:48,170 | INFO     | transferring file log.44075483._065291.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6606188482/log.44075483._065291.job.log.tgz.1 to /local/data/boinc/
[2025-04-18 22:06:34] 2025-04-18 20:05:48,170 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6606188482/log.44075483._065291.job.log.tgz.1 /local/data/boinc/slots/0/log.44075483._0652
[2025-04-18 22:06:34] 2025-04-18 20:05:48,183 | INFO     | adding to output.list: log.44075483._065291.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/32/2f/log.44075483._065291.job.log.tg
[2025-04-18 22:06:34] 2025-04-18 20:05:48,183 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-18 22:06:34] 2025-04-18 20:05:48,183 | INFO     | summary of transferred files:
[2025-04-18 22:06:34] 2025-04-18 20:05:48,183 | INFO     |  -- lfn=log.44075483._065291.job.log.tgz.1, status_code=0, status=transferred
[2025-04-18 22:06:34] 2025-04-18 20:05:48,183 | INFO     | stage-out finished correctly
[2025-04-18 22:06:34] 2025-04-18 20:05:49,292 | INFO     | monitor loop #424: job 0:6606188482 is in state 'finished'
[2025-04-18 22:06:34] 2025-04-18 20:05:49,293 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-18 22:06:34] 2025-04-18 20:05:50,380 | INFO     | PID=870874 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-04-18 22:06:34] 2025-04-18 20:05:50,500 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-18 22:06:34] 2025-04-18 20:05:51,154 | INFO     | job 6606188482 has state=finished
[2025-04-18 22:06:34] 2025-04-18 20:05:51,154 | INFO     | preparing for final server update for job 6606188482 in state='finished'
[2025-04-18 22:06:34] 2025-04-18 20:05:51,155 | INFO     | this job has now completed (state=finished)
[2025-04-18 22:06:34] 2025-04-18 20:05:51,155 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-18 22:06:34] 2025-04-18 20:05:51,155 | INFO     | log transfer has been attempted: DONE
[2025-04-18 22:06:34] 2025-04-18 20:05:51,155 | INFO     | job 6606188482 has finished - writing final server update
[2025-04-18 22:06:34] 2025-04-18 20:05:51,155 | INFO     | total number of processed events: 400 (read)
[2025-04-18 22:06:34] 2025-04-18 20:05:51,156 | INFO     | executing command: lscpu
[2025-04-18 22:06:34] 2025-04-18 20:05:51,173 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-18 22:06:34] 2025-04-18 20:05:51,795 | INFO     | monitor loop #425: job 0:6606188482 is in state 'finished'
[2025-04-18 22:06:34] 2025-04-18 20:05:51,796 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-18 22:06:34] 2025-04-18 20:05:53,592 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-18 22:06:34] 2025-04-18 20:05:53,592 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6606188482/memory_monitor_summary.json (trf name=prmon)
[2025-04-18 22:06:34] 2025-04-18 20:05:53,593 | INFO     | extracted standard info from prmon json
[2025-04-18 22:06:34] 2025-04-18 20:05:53,593 | INFO     | extracted standard memory fields from prmon json
[2025-04-18 22:06:34] 2025-04-18 20:05:53,593 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-18 22:06:34] 2025-04-18 20:05:53,593 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-18 22:06:34] 2025-04-18 20:05:53,593 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-18 22:06:34] 2025-04-18 20:05:53,594 | INFO     | fitting pss+swap vs Time
[2025-04-18 22:06:34] 2025-04-18 20:05:53,594 | INFO     | sum of square deviations: 177275882.0
[2025-04-18 22:06:34] 2025-04-18 20:05:53,594 | INFO     | sum of deviations: -260467011.00000024
[2025-04-18 22:06:34] 2025-04-18 20:05:53,594 | INFO     | mean x: 1745004071.0
[2025-04-18 22:06:34] 2025-04-18 20:05:53,594 | INFO     | mean y: 2415652.4578313255
[2025-04-18 22:06:34] 2025-04-18 20:05:53,594 | INFO     | -- intersect: 2566306405.2687645
[2025-04-18 22:06:34] 2025-04-18 20:05:53,594 | INFO     | intersect: 2566306405.2687645
[2025-04-18 22:06:34] 2025-04-18 20:05:53,594 | INFO     | chi2: 1.5733445485838944
[2025-04-18 22:06:34] 2025-04-18 20:05:53,594 | INFO     | -- intersect: 2566306405.2687645
[2025-04-18 22:06:34] 2025-04-18 20:05:53,594 | INFO     | current memory leak: -1.47 B/s (using 83 data points, chi2=1.57)
[2025-04-18 22:06:34] 2025-04-18 20:05:53,594 | INFO     | ..............................
[2025-04-18 22:06:34] 2025-04-18 20:05:53,594 | INFO     | . Timing measurements:
[2025-04-18 22:06:34] 2025-04-18 20:05:53,594 | INFO     | . get job = 0 s
[2025-04-18 22:06:34] 2025-04-18 20:05:53,594 | INFO     | . initial setup = 1 s
[2025-04-18 22:06:34] 2025-04-18 20:05:53,594 | INFO     | . payload setup = 3 s
[2025-04-18 22:06:34] 2025-04-18 20:05:53,594 | INFO     | . stage-in = 0 s
[2025-04-18 22:06:34] 2025-04-18 20:05:53,594 | INFO     | . payload execution = 5481 s
[2025-04-18 22:06:34] 2025-04-18 20:05:53,595 | INFO     | . stage-out = 0 s
[2025-04-18 22:06:34] 2025-04-18 20:05:53,595 | INFO     | . log creation = 0 s
[2025-04-18 22:06:34] 2025-04-18 20:05:53,595 | INFO     | ..............................
[2025-04-18 22:06:34] 2025-04-18 20:05:53,626 | INFO     | 
[2025-04-18 22:06:34] 2025-04-18 20:05:53,626 | INFO     | job summary report
[2025-04-18 22:06:34] 2025-04-18 20:05:53,626 | INFO     | --------------------------------------------------
[2025-04-18 22:06:34] 2025-04-18 20:05:53,626 | INFO     | PanDA job id: 6606188482
[2025-04-18 22:06:34] 2025-04-18 20:05:53,626 | INFO     | task id: 44075483
[2025-04-18 22:06:34] 2025-04-18 20:05:53,627 | INFO     | errors: (none)
[2025-04-18 22:06:34] 2025-04-18 20:05:53,627 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-18 22:06:34] 2025-04-18 20:05:53,627 | INFO     | pilot state: finished 
[2025-04-18 22:06:34] 2025-04-18 20:05:53,627 | INFO     | transexitcode: 0
[2025-04-18 22:06:34] 2025-04-18 20:05:53,627 | INFO     | exeerrorcode: 0
[2025-04-18 22:06:34] 2025-04-18 20:05:53,627 | INFO     | exeerrordiag: 
[2025-04-18 22:06:34] 2025-04-18 20:05:53,627 | INFO     | exitcode: 0
[2025-04-18 22:06:34] 2025-04-18 20:05:53,627 | INFO     | exitmsg: OK
[2025-04-18 22:06:34] 2025-04-18 20:05:53,627 | INFO     | cpuconsumptiontime: 14592 s
[2025-04-18 22:06:34] 2025-04-18 20:05:53,627 | INFO     | nevents: 400
[2025-04-18 22:06:34] 2025-04-18 20:05:53,627 | INFO     | neventsw: 0
[2025-04-18 22:06:34] 2025-04-18 20:05:53,627 | INFO     | pid: 877319
[2025-04-18 22:06:34] 2025-04-18 20:05:53,627 | INFO     | pgrp: 877319
[2025-04-18 22:06:34] 2025-04-18 20:05:53,627 | INFO     | corecount: 3
[2025-04-18 22:06:34] 2025-04-18 20:05:53,627 | INFO     | event service: False
[2025-04-18 22:06:34] 2025-04-18 20:05:53,627 | INFO     | sizes: {0: 2426827, 3: 2427033, 11: 2427061, 5489: 2453664, 5490: 2462611, 5492: 2462667, 5495: 2462965}
[2025-04-18 22:06:34] 2025-04-18 20:05:53,627 | INFO     | --------------------------------------------------
[2025-04-18 22:06:34] 2025-04-18 20:05:53,627 | INFO     | 
[2025-04-18 22:06:34] 2025-04-18 20:05:53,627 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-04-18 22:06:34] 2025-04-18 20:05:53,639 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-18 22:06:34] 2025-04-18 20:05:53,639 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-18 22:06:34] 2025-04-18 20:05:53,639 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-18 22:06:34] 2025-04-18 20:05:53,639 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-18 22:06:34] 2025-04-18 20:05:53,639 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-18 22:06:34] 2025-04-18 20:05:53,639 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-18 22:06:34] 2025-04-18 20:05:53,639 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-18 22:06:34] 2025-04-18 20:05:53,639 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-18 22:06:34] 2025-04-18 20:05:53,639 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-18 22:06:34] 2025-04-18 20:05:53,639 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-18 22:06:34] 2025-04-18 20:05:53,639 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-18 22:06:34] 2025-04-18 20:05:53,639 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-18 22:06:34] 2025-04-18 20:05:53,639 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-18 22:06:34] 2025-04-18 20:05:53,639 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-18 22:06:34] 2025-04-18 20:05:53,639 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-18 22:06:34] 2025-04-18 20:05:53,640 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-18 22:06:34] 2025-04-18 20:05:53,640 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-18 22:06:34] 2025-04-18 20:05:53,640 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-18 22:06:34] 2025-04-18 20:05:53,640 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-18 22:06:34] 2025-04-18 20:05:53,640 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-18 22:06:34] 2025-04-18 20:05:53,640 | INFO     | job 6606188482 has completed (purged errors)
[2025-04-18 22:06:34] 2025-04-18 20:05:53,640 | INFO     | overall cleanup function is called
[2025-04-18 22:06:34] 2025-04-18 20:05:54,646 | INFO     | --- collectZombieJob: --- 10, [877319]
[2025-04-18 22:06:34] 2025-04-18 20:05:54,647 | INFO     | zombie collector waiting for pid 877319
[2025-04-18 22:06:34] 2025-04-18 20:05:54,647 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-18 22:06:34] 2025-04-18 20:05:54,647 | INFO     | collected zombie processes
[2025-04-18 22:06:34] 2025-04-18 20:05:54,647 | INFO     | will attempt to kill all subprocesses of pid=877319
[2025-04-18 22:06:34] 2025-04-18 20:05:54,688 | INFO     | process IDs to be killed: [877319] (in reverse order)
[2025-04-18 22:06:34] 2025-04-18 20:05:54,713 | WARNING  | found no corresponding commands to process id(s)
[2025-04-18 22:06:34] 2025-04-18 20:05:54,713 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-18 22:06:34] 2025-04-18 20:05:54,714 | INFO     | did not find any defunct processes belonging to 877319
[2025-04-18 22:06:34] 2025-04-18 20:05:54,715 | INFO     | did not find any defunct processes belonging to 877319
[2025-04-18 22:06:34] 2025-04-18 20:05:54,715 | INFO     | ready for new job
[2025-04-18 22:06:34] 2025-04-18 20:05:54,715 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-18 22:06:34] 2025-04-18 20:05:54,716 | INFO     | **************************************
[2025-04-18 22:06:34] 2025-04-18 20:05:54,716 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-18 22:06:34] 2025-04-18 20:05:54,716 | INFO     | **************************************
[2025-04-18 22:06:34] 2025-04-18 20:05:54,716 | INFO     | 
[2025-04-18 22:06:34] 2025-04-18 20:05:54,716 | INFO     | architecture information:
[2025-04-18 22:06:34] 2025-04-18 20:05:54,717 | INFO     | executing command: cat /etc/os-release
[2025-04-18 22:06:34] 2025-04-18 20:05:54,725 | INFO     | cat /etc/os-release:
[2025-04-18 22:06:34] NAME="CentOS Linux"
[2025-04-18 22:06:34] VERSION="7 (Core)"
[2025-04-18 22:06:34] ID="centos"
[2025-04-18 22:06:34] ID_LIKE="rhel fedora"
[2025-04-18 22:06:34] VERSION_ID="7"
[2025-04-18 22:06:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-18 22:06:34] ANSI_COLOR="0;31"
[2025-04-18 22:06:34] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-18 22:06:34] HOME_URL="https://www.centos.org/"
[2025-04-18 22:06:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-18 22:06:34] 
[2025-04-18 22:06:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-18 22:06:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-18 22:06:34] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-18 22:06:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-18 22:06:34] 
[2025-04-18 22:06:34] 2025-04-18 20:05:54,726 | INFO     | **************************************
[2025-04-18 22:06:34] 2025-04-18 20:05:55,229 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-04-18 22:06:34] 2025-04-18 20:05:55,242 | INFO     | sufficient remaining disk space (376897011712 B)
[2025-04-18 22:06:34] 2025-04-18 20:05:55,242 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-18 22:06:34] 2025-04-18 20:05:55,242 | INFO     | current server update state: UPDATING_FINAL
[2025-04-18 22:06:34] 2025-04-18 20:05:55,242 | INFO     | update_server=False
[2025-04-18 22:06:34] 2025-04-18 20:05:55,243 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-18 22:06:34] 2025-04-18 20:05:55,243 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-18 22:06:34] 2025-04-18 20:05:55,243 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-18 22:06:34] 2025-04-18 20:05:55,243 | INFO     | found 0 job(s) in 20 queues
[2025-04-18 22:06:34] 2025-04-18 20:05:55,243 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-18 22:06:34] 2025-04-18 20:05:55,243 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-18 22:06:34] 2025-04-18 20:05:55,305 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-18 22:06:34] 2025-04-18 20:05:55,305 | INFO     | aborting loop
[2025-04-18 22:06:34] 2025-04-18 20:05:55,974 | INFO     | all payload control threads have been joined
[2025-04-18 22:06:34] 2025-04-18 20:05:56,201 | INFO     | all job control threads have been joined
[2025-04-18 22:06:34] 2025-04-18 20:05:56,227 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-18 22:06:34] 2025-04-18 20:05:56,248 | INFO     | [job] retrieve thread has finished
[2025-04-18 22:06:34] 2025-04-18 20:05:56,249 | INFO     | [job] queue monitor thread has finished
[2025-04-18 22:06:34] 2025-04-18 20:05:56,293 | INFO     | all data control threads have been joined
[2025-04-18 22:06:34] 2025-04-18 20:05:56,310 | INFO     | [job] job monitor thread has finished
[2025-04-18 22:06:34] 2025-04-18 20:05:56,518 | INFO     | [payload] failed_post thread has finished
[2025-04-18 22:06:34] 2025-04-18 20:05:56,531 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-18 22:06:34] 2025-04-18 20:05:56,539 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-18 22:06:34] 2025-04-18 20:05:56,754 | INFO     | [data] copytool_in thread has finished
[2025-04-18 22:06:34] 2025-04-18 20:05:56,979 | INFO     | [payload] control thread has finished
[2025-04-18 22:06:34] 2025-04-18 20:05:57,071 | INFO     | [job] validate thread has finished
[2025-04-18 22:06:34] 2025-04-18 20:05:57,126 | INFO     | [payload] execute_payloads thread has finished
[2025-04-18 22:06:34] 2025-04-18 20:05:57,169 | INFO     | [job] create_data_payload thread has finished
[2025-04-18 22:06:34] 2025-04-18 20:05:57,207 | INFO     | [job] control thread has finished
[2025-04-18 22:06:34] 2025-04-18 20:05:57,234 | INFO     | [payload] validate_pre thread has finished
[2025-04-18 22:06:34] 2025-04-18 20:05:57,299 | INFO     | [data] control thread has finished
[2025-04-18 22:06:34] 2025-04-18 20:05:57,751 | INFO     | [payload] validate_post thread has finished
[2025-04-18 22:06:34] 2025-04-18 20:05:58,233 | INFO     | [data] copytool_out thread has finished
[2025-04-18 22:06:34] 2025-04-18 20:06:00,543 | INFO     | [data] queue_monitor thread has finished
[2025-04-18 22:06:34] 2025-04-18 20:06:01,011 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140136556496704)>', '<ExcThread(monitor, started 140135320516352)>']
[2025-04-18 22:06:34] 2025-04-18 20:06:01,276 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-18 22:06:34] 2025-04-18 20:06:01,276 | INFO     | [monitor] control thread has ended
[2025-04-18 22:06:34] 2025-04-18 20:06:06,036 | INFO     | all workflow threads have been joined
[2025-04-18 22:06:34] 2025-04-18 20:06:06,037 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-18 22:06:34] 2025-04-18 20:06:06,037 | INFO     | traces error code: 0
[2025-04-18 22:06:34] 2025-04-18 20:06:06,037 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-18 22:06:34] 2025-04-18 20:06:06,088 [wrapper] ==== pilot stdout END ====
[2025-04-18 22:06:34] 2025-04-18 20:06:06,091 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-18 22:06:34] 2025-04-18 20:06:06,093 [wrapper] pilotpid: 870874
[2025-04-18 22:06:34] 2025-04-18 20:06:06,096 [wrapper] Pilot exit status: 0
[2025-04-18 22:06:34] 2025-04-18 20:06:06,104 [wrapper] pandaids: 6606188482
[2025-04-18 22:06:34] 2025-04-18 20:06:06,120 [wrapper] cleanup supervisor_pilot  889508 870875
[2025-04-18 22:06:34] 2025-04-18 20:06:06,123 [wrapper] Test setup, not cleaning
[2025-04-18 22:06:34] 2025-04-18 20:06:06,125 [wrapper] apfmon messages muted
[2025-04-18 22:06:34] 2025-04-18 20:06:06,128 [wrapper] ==== wrapper stdout END ====
[2025-04-18 22:06:34] 2025-04-18 20:06:06,130 [wrapper] ==== wrapper stderr END ====
[2025-04-18 22:06:34]  *** Error codes and diagnostics ***
[2025-04-18 22:06:34]     "exeErrorCode": 0,
[2025-04-18 22:06:34]     "exeErrorDiag": "",
[2025-04-18 22:06:34]     "pilotErrorCode": 0,
[2025-04-18 22:06:34]     "pilotErrorDiag": "",
[2025-04-18 22:06:34]  *** Listing of results directory ***
[2025-04-18 22:06:34] total 418396
[2025-04-18 22:06:34] -rw-r--r-- 1 boinc boinc      5111 Apr 18 08:14 queuedata.json
[2025-04-18 22:06:34] -rwx------ 1 boinc boinc     37140 Apr 18 08:15 runpilot2-wrapper.sh
[2025-04-18 22:06:34] -rw-r--r-- 1 boinc boinc    495897 Apr 18 08:15 pilot3.tar.gz
[2025-04-18 22:06:34] -rw-r--r-- 1 boinc boinc       100 Apr 18 20:33 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-18 22:06:34] -rwxr-xr-x 1 boinc boinc      7986 Apr 18 20:33 run_atlas
[2025-04-18 22:06:34] -rw-r--r-- 1 boinc boinc       105 Apr 18 20:33 job.xml
[2025-04-18 22:06:34] -rw-r--r-- 2 boinc boinc 225500363 Apr 18 20:33 EVNT.44075481._002537.pool.root.1
[2025-04-18 22:06:34] -rw-r--r-- 1 boinc boinc      6931 Apr 18 20:33 init_data.xml
[2025-04-18 22:06:34] drwxrwx--x 2 boinc boinc      4096 Apr 18 20:33 shared
[2025-04-18 22:06:34] -rw-r--r-- 2 boinc boinc    508886 Apr 18 20:33 input.tar.gz
[2025-04-18 22:06:34] -rw-r--r-- 2 boinc boinc     17569 Apr 18 20:33 start_atlas.sh
[2025-04-18 22:06:34] -rw-r--r-- 1 boinc boinc         0 Apr 18 20:33 boinc_lockfile
[2025-04-18 22:06:34] -rw-r--r-- 1 boinc boinc      2579 Apr 18 20:34 pandaJob.out
[2025-04-18 22:06:34] -rw------- 1 boinc boinc       424 Apr 18 20:34 setup.sh.local
[2025-04-18 22:06:34] -rw------- 1 boinc boinc    991292 Apr 18 20:34 agis_schedconf.cvmfs.json
[2025-04-18 22:06:34] -rw------- 1 boinc boinc   1618536 Apr 18 20:34 agis_ddmendpoints.agis.ALL.json
[2025-04-18 22:06:34] drwx------ 4 boinc boinc      4096 Apr 18 20:34 pilot3
[2025-04-18 22:06:34] -rw------- 1 boinc boinc 197510982 Apr 18 22:05 HITS.44075483._065291.pool.root.1
[2025-04-18 22:06:34] -rw------- 1 boinc boinc        95 Apr 18 22:05 pilot_heartbeat.json
[2025-04-18 22:06:34] -rw-r--r-- 1 boinc boinc       529 Apr 18 22:05 boinc_task_state.xml
[2025-04-18 22:06:34] -rw------- 1 boinc boinc      1015 Apr 18 22:05 memory_monitor_summary.json
[2025-04-18 22:06:34] -rw------- 1 boinc boinc    248824 Apr 18 22:05 log.44075483._065291.job.log.tgz.1
[2025-04-18 22:06:34] -rw------- 1 boinc boinc      7653 Apr 18 22:05 heartbeat.json
[2025-04-18 22:06:34] -rw------- 1 boinc boinc      4480 Apr 18 22:06 pilotlog.txt
[2025-04-18 22:06:34] -rw------- 1 boinc boinc    530052 Apr 18 22:06 log.44075483._065291.job.log.1
[2025-04-18 22:06:34] -rw------- 1 boinc boinc       357 Apr 18 22:06 output.list
[2025-04-18 22:06:34] -rw-r--r-- 1 boinc boinc       620 Apr 18 22:06 runtime_log
[2025-04-18 22:06:34] -rw------- 1 boinc boinc    798720 Apr 18 22:06 result.tar.gz
[2025-04-18 22:06:34] -rw-r--r-- 1 boinc boinc     11114 Apr 18 22:06 runtime_log.err
[2025-04-18 22:06:34] -rw------- 1 boinc boinc       661 Apr 18 22:06 MpZLDmcBuP7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmNbeLDmDu06Vn.diag
[2025-04-18 22:06:34] -rw-r--r-- 1 boinc boinc      8192 Apr 18 22:06 boinc_mmap_file
[2025-04-18 22:06:34] -rw-r--r-- 1 boinc boinc        27 Apr 18 22:06 wrapper_checkpoint.txt
[2025-04-18 22:06:34] -rw-r--r-- 1 boinc boinc     21310 Apr 18 22:06 stderr.txt
[2025-04-18 22:06:34] HITS file was successfully produced:
[2025-04-18 22:06:34] -rw------- 1 boinc boinc 197510982 Apr 18 22:05 shared/HITS.pool.root.1
[2025-04-18 22:06:34]  *** Contents of shared directory: ***
[2025-04-18 22:06:34] total 414408
[2025-04-18 22:06:34] -rw-r--r-- 2 boinc boinc 225500363 Apr 18 20:33 ATLAS.root_0
[2025-04-18 22:06:34] -rw-r--r-- 2 boinc boinc    508886 Apr 18 20:33 input.tar.gz
[2025-04-18 22:06:34] -rw-r--r-- 2 boinc boinc     17569 Apr 18 20:33 start_atlas.sh
[2025-04-18 22:06:34] -rw------- 1 boinc boinc 197510982 Apr 18 22:05 HITS.pool.root.1
[2025-04-18 22:06:34] -rw------- 1 boinc boinc    798720 Apr 18 22:06 result.tar.gz
22:06:36 (867226): run_atlas exited; CPU time 14609.493120
22:06:36 (867226): called boinc_finish(0)

</stderr_txt>
]]>

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