Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
04:28:41 (12544): wrapper (7.7.26015): starting
04:28:41 (12544): wrapper: running run_atlas (--nthreads 12)
[2025-04-18 04:28:41] Arguments: --nthreads 12
[2025-04-18 04:28:41] Threads: 12
[2025-04-18 04:28:41] Checking for CVMFS
[2025-04-18 04:28:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-18 04:28:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-18 04:28:41] Running cvmfs_config stat atlas.cern.ch
[2025-04-18 04:28:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-18 04:28:41] 2.11.2.0 10995 192623 158608 144995 2 57 18802104 20275200 1 130560 0 22652132 99.990 6859696 48472 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-18 04:28:41] CVMFS is ok
[2025-04-18 04:28:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-18 04:28:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-18 04:28:41] Further information can be found at the LHC@home message board.
[2025-04-18 04:28:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-18 04:28:41] Checking for apptainer binary...
[2025-04-18 04:28:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-18 04:28:41] Running /usr/bin/apptainer --version
[2025-04-18 04:28:41] apptainer version 1.3.2-1.el7
[2025-04-18 04:28:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-18 04:28:42] c-205-22.aglt2.org
[2025-04-18 04:28:42] apptainer works
[2025-04-18 04:28:42] Set ATHENA_PROC_NUMBER=12
[2025-04-18 04:28:42] Set ATHENA_CORE_NUMBER=12
[2025-04-18 04:28:42] Starting ATLAS job with PandaID=6606172124
[2025-04-18 04:28:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-18 05:51:19]  *** The last 200 lines of the pilot log: ***
[2025-04-18 05:51:19]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-18 05:51:19]  replicas=None
[2025-04-18 05:51:19]  scope=mc23_13p6TeV
[2025-04-18 05:51:19]  status=None
[2025-04-18 05:51:19]  status_code=0
[2025-04-18 05:51:19]  storage_token=
[2025-04-18 05:51:19]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6606172124/log.44075483._065002.job.log.tgz.1
[2025-04-18 05:51:19]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/aa/40/log.44075483._065002.job.log.tgz.1
[2025-04-18 05:51:19]  workdir=None
[2025-04-18 05:51:19] ]
[2025-04-18 05:51:19] 2025-04-18 09:50:49,542 | INFO     | transferring file log.44075483._065002.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6606172124/log.44075483._065002.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-04-18 05:51:19] 2025-04-18 09:50:49,542 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6606172124/log.44075483._065002.job.log.tgz.1 /tmp/boinchome/slots/0/log.44075483._065002.job
[2025-04-18 05:51:19] 2025-04-18 09:50:49,564 | INFO     | adding to output.list: log.44075483._065002.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/aa/40/log.44075483._065002.job.log.tg
[2025-04-18 05:51:19] 2025-04-18 09:50:49,565 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-18 05:51:19] 2025-04-18 09:50:49,565 | INFO     | summary of transferred files:
[2025-04-18 05:51:19] 2025-04-18 09:50:49,565 | INFO     |  -- lfn=log.44075483._065002.job.log.tgz.1, status_code=0, status=transferred
[2025-04-18 05:51:19] 2025-04-18 09:50:49,565 | INFO     | stage-out finished correctly
[2025-04-18 05:51:19] 2025-04-18 09:50:50,731 | WARNING  | process 22559 can no longer be monitored (due to stat problems) - aborting
[2025-04-18 05:51:19] 2025-04-18 09:50:50,732 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6606172124/memory_monitor_summary.json (trf name=prmon)
[2025-04-18 05:51:19] 2025-04-18 09:50:50,817 | INFO     | number of running child processes to parent process 22559: 1
[2025-04-18 05:51:19] 2025-04-18 09:50:50,817 | INFO     | maximum number of monitored processes: 6
[2025-04-18 05:51:19] 2025-04-18 09:50:52,767 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-18 05:51:19] 2025-04-18 09:50:53,326 | INFO     | monitor loop #366: job 0:6606172124 is in state 'finished'
[2025-04-18 05:51:19] 2025-04-18 09:50:53,326 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-18 05:51:19] 2025-04-18 09:50:54,446 | INFO     | job 6606172124 has state=finished
[2025-04-18 05:51:19] 2025-04-18 09:50:54,447 | INFO     | preparing for final server update for job 6606172124 in state='finished'
[2025-04-18 05:51:19] 2025-04-18 09:50:54,527 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-04-18 05:51:19] 2025-04-18 09:50:54,527 | INFO     | this job has now completed (state=finished)
[2025-04-18 05:51:19] 2025-04-18 09:50:54,528 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-18 05:51:19] 2025-04-18 09:50:54,528 | INFO     | log transfer has been attempted: DONE
[2025-04-18 05:51:19] 2025-04-18 09:50:54,528 | INFO     | job 6606172124 has finished - writing final server update
[2025-04-18 05:51:19] 2025-04-18 09:50:54,528 | INFO     | total number of processed events: 400 (read)
[2025-04-18 05:51:19] 2025-04-18 09:50:54,529 | INFO     | executing command: lscpu
[2025-04-18 05:51:19] 2025-04-18 09:50:54,554 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-18 05:51:19] 2025-04-18 09:50:55,829 | INFO     | monitor loop #367: job 0:6606172124 is in state 'finished'
[2025-04-18 05:51:19] 2025-04-18 09:50:55,829 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-18 05:51:19] 2025-04-18 09:50:58,332 | INFO     | monitor loop #368: job 0:6606172124 is in state 'finished'
[2025-04-18 05:51:19] 2025-04-18 09:50:58,332 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-18 05:51:19] 2025-04-18 09:50:58,628 | INFO     | PID=16157 has CPU usage=6.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-04-18 05:51:19] 2025-04-18 09:50:59,132 | INFO     | CPU arch script returned: x86-64-v2
[2025-04-18 05:51:19] 2025-04-18 09:50:59,133 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6606172124/memory_monitor_summary.json (trf name=prmon)
[2025-04-18 05:51:19] 2025-04-18 09:50:59,134 | INFO     | extracted standard info from prmon json
[2025-04-18 05:51:19] 2025-04-18 09:50:59,134 | INFO     | extracted standard memory fields from prmon json
[2025-04-18 05:51:19] 2025-04-18 09:50:59,134 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-18 05:51:19] 2025-04-18 09:50:59,135 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-18 05:51:19] 2025-04-18 09:50:59,135 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-18 05:51:19] 2025-04-18 09:50:59,137 | INFO     | fitting pss+swap vs Time
[2025-04-18 05:51:19] 2025-04-18 09:50:59,137 | INFO     | sum of square deviations: 125630262.5
[2025-04-18 05:51:19] 2025-04-18 09:50:59,138 | INFO     | sum of deviations: 16747379108.499996
[2025-04-18 05:51:19] 2025-04-18 09:50:59,138 | INFO     | mean x: 1744967495.5
[2025-04-18 05:51:19] 2025-04-18 09:50:59,138 | INFO     | mean y: 2625328.581081081
[2025-04-18 05:51:19] 2025-04-18 09:50:59,138 | INFO     | -- intersect: -232613558046.40994
[2025-04-18 05:51:19] 2025-04-18 09:50:59,138 | INFO     | intersect: -232613558046.40994
[2025-04-18 05:51:19] 2025-04-18 09:50:59,139 | INFO     | chi2: 2.379912133176989
[2025-04-18 05:51:19] 2025-04-18 09:50:59,139 | INFO     | -- intersect: -232613558046.40994
[2025-04-18 05:51:19] 2025-04-18 09:50:59,139 | INFO     | current memory leak: 133.31 B/s (using 74 data points, chi2=2.38)
[2025-04-18 05:51:19] 2025-04-18 09:50:59,139 | INFO     | ..............................
[2025-04-18 05:51:19] 2025-04-18 09:50:59,140 | INFO     | . Timing measurements:
[2025-04-18 05:51:19] 2025-04-18 09:50:59,140 | INFO     | . get job = 0 s
[2025-04-18 05:51:19] 2025-04-18 09:50:59,140 | INFO     | . initial setup = 2 s
[2025-04-18 05:51:19] 2025-04-18 09:50:59,140 | INFO     | . payload setup = 7 s
[2025-04-18 05:51:19] 2025-04-18 09:50:59,140 | INFO     | . stage-in = 0 s
[2025-04-18 05:51:19] 2025-04-18 09:50:59,140 | INFO     | . payload execution = 4886 s
[2025-04-18 05:51:19] 2025-04-18 09:50:59,140 | INFO     | . stage-out = 0 s
[2025-04-18 05:51:19] 2025-04-18 09:50:59,141 | INFO     | . log creation = 0 s
[2025-04-18 05:51:19] 2025-04-18 09:50:59,141 | INFO     | ..............................
[2025-04-18 05:51:19] 2025-04-18 09:50:59,382 | INFO     | 
[2025-04-18 05:51:19] 2025-04-18 09:50:59,383 | INFO     | job summary report
[2025-04-18 05:51:19] 2025-04-18 09:50:59,383 | INFO     | --------------------------------------------------
[2025-04-18 05:51:19] 2025-04-18 09:50:59,383 | INFO     | PanDA job id: 6606172124
[2025-04-18 05:51:19] 2025-04-18 09:50:59,383 | INFO     | task id: 44075483
[2025-04-18 05:51:19] 2025-04-18 09:50:59,383 | INFO     | errors: (none)
[2025-04-18 05:51:19] 2025-04-18 09:50:59,384 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-18 05:51:19] 2025-04-18 09:50:59,384 | INFO     | pilot state: finished 
[2025-04-18 05:51:19] 2025-04-18 09:50:59,384 | INFO     | transexitcode: 0
[2025-04-18 05:51:19] 2025-04-18 09:50:59,384 | INFO     | exeerrorcode: 0
[2025-04-18 05:51:19] 2025-04-18 09:50:59,384 | INFO     | exeerrordiag: 
[2025-04-18 05:51:19] 2025-04-18 09:50:59,384 | INFO     | exitcode: 0
[2025-04-18 05:51:19] 2025-04-18 09:50:59,384 | INFO     | exitmsg: OK
[2025-04-18 05:51:19] 2025-04-18 09:50:59,385 | INFO     | cpuconsumptiontime: 46510 s
[2025-04-18 05:51:19] 2025-04-18 09:50:59,385 | INFO     | nevents: 400
[2025-04-18 05:51:19] 2025-04-18 09:50:59,385 | INFO     | neventsw: 0
[2025-04-18 05:51:19] 2025-04-18 09:50:59,385 | INFO     | pid: 22559
[2025-04-18 05:51:19] 2025-04-18 09:50:59,385 | INFO     | pgrp: 22559
[2025-04-18 05:51:19] 2025-04-18 09:50:59,385 | INFO     | corecount: 12
[2025-04-18 05:51:19] 2025-04-18 09:50:59,385 | INFO     | event service: False
[2025-04-18 05:51:19] 2025-04-18 09:50:59,385 | INFO     | sizes: {0: 2426771, 5: 2426977, 11: 2427033, 4897: 2453153, 4898: 2462094, 4901: 2462150, 4907: 2462448}
[2025-04-18 05:51:19] 2025-04-18 09:50:59,386 | INFO     | --------------------------------------------------
[2025-04-18 05:51:19] 2025-04-18 09:50:59,386 | INFO     | 
[2025-04-18 05:51:19] 2025-04-18 09:50:59,386 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-18 05:51:19] 2025-04-18 09:50:59,410 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-18 05:51:19] 2025-04-18 09:50:59,410 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-18 05:51:19] 2025-04-18 09:50:59,410 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-18 05:51:19] 2025-04-18 09:50:59,411 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-18 05:51:19] 2025-04-18 09:50:59,411 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-18 05:51:19] 2025-04-18 09:50:59,411 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-18 05:51:19] 2025-04-18 09:50:59,411 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-18 05:51:19] 2025-04-18 09:50:59,411 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-18 05:51:19] 2025-04-18 09:50:59,411 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-18 05:51:19] 2025-04-18 09:50:59,412 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-18 05:51:19] 2025-04-18 09:50:59,412 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-18 05:51:19] 2025-04-18 09:50:59,412 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-18 05:51:19] 2025-04-18 09:50:59,412 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-18 05:51:19] 2025-04-18 09:50:59,412 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-18 05:51:19] 2025-04-18 09:50:59,412 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-18 05:51:19] 2025-04-18 09:50:59,413 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-18 05:51:19] 2025-04-18 09:50:59,413 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-18 05:51:19] 2025-04-18 09:50:59,413 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-18 05:51:19] 2025-04-18 09:50:59,413 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-18 05:51:19] 2025-04-18 09:50:59,413 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-18 05:51:19] 2025-04-18 09:50:59,414 | INFO     | job 6606172124 has completed (purged errors)
[2025-04-18 05:51:19] 2025-04-18 09:50:59,414 | INFO     | overall cleanup function is called
[2025-04-18 05:51:19] 2025-04-18 09:51:00,422 | INFO     | --- collectZombieJob: --- 10, [22559]
[2025-04-18 05:51:19] 2025-04-18 09:51:00,422 | INFO     | zombie collector waiting for pid 22559
[2025-04-18 05:51:19] 2025-04-18 09:51:00,422 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-18 05:51:19] 2025-04-18 09:51:00,422 | INFO     | collected zombie processes
[2025-04-18 05:51:19] 2025-04-18 09:51:00,422 | INFO     | will attempt to kill all subprocesses of pid=22559
[2025-04-18 05:51:19] 2025-04-18 09:51:00,512 | INFO     | process IDs to be killed: [22559] (in reverse order)
[2025-04-18 05:51:19] 2025-04-18 09:51:00,563 | WARNING  | found no corresponding commands to process id(s)
[2025-04-18 05:51:19] 2025-04-18 09:51:00,563 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-18 05:51:19] 2025-04-18 09:51:00,566 | INFO     | did not find any defunct processes belonging to 22559
[2025-04-18 05:51:19] 2025-04-18 09:51:00,568 | INFO     | did not find any defunct processes belonging to 22559
[2025-04-18 05:51:19] 2025-04-18 09:51:00,569 | INFO     | ready for new job
[2025-04-18 05:51:19] 2025-04-18 09:51:00,569 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-18 05:51:19] 2025-04-18 09:51:00,570 | INFO     | **************************************
[2025-04-18 05:51:19] 2025-04-18 09:51:00,570 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-18 05:51:19] 2025-04-18 09:51:00,570 | INFO     | **************************************
[2025-04-18 05:51:19] 2025-04-18 09:51:00,570 | INFO     | 
[2025-04-18 05:51:19] 2025-04-18 09:51:00,571 | INFO     | architecture information:
[2025-04-18 05:51:19] 2025-04-18 09:51:00,571 | INFO     | executing command: cat /etc/os-release
[2025-04-18 05:51:19] 2025-04-18 09:51:00,585 | INFO     | cat /etc/os-release:
[2025-04-18 05:51:19] NAME="CentOS Linux"
[2025-04-18 05:51:19] VERSION="7 (Core)"
[2025-04-18 05:51:19] ID="centos"
[2025-04-18 05:51:19] ID_LIKE="rhel fedora"
[2025-04-18 05:51:19] VERSION_ID="7"
[2025-04-18 05:51:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-18 05:51:19] ANSI_COLOR="0;31"
[2025-04-18 05:51:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-18 05:51:19] HOME_URL="https://www.centos.org/"
[2025-04-18 05:51:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-18 05:51:19] 
[2025-04-18 05:51:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-18 05:51:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-18 05:51:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-18 05:51:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-18 05:51:19] 
[2025-04-18 05:51:19] 2025-04-18 09:51:00,585 | INFO     | **************************************
[2025-04-18 05:51:19] 2025-04-18 09:51:01,088 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-18 05:51:19] 2025-04-18 09:51:01,104 | INFO     | sufficient remaining disk space (29403119616 B)
[2025-04-18 05:51:19] 2025-04-18 09:51:01,104 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-18 05:51:19] 2025-04-18 09:51:01,105 | INFO     | current server update state: UPDATING_FINAL
[2025-04-18 05:51:19] 2025-04-18 09:51:01,105 | INFO     | update_server=False
[2025-04-18 05:51:19] 2025-04-18 09:51:01,105 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-18 05:51:19] 2025-04-18 09:51:01,105 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-18 05:51:19] 2025-04-18 09:51:01,106 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-18 05:51:19] 2025-04-18 09:51:01,106 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-18 05:51:19] 2025-04-18 09:51:01,107 | INFO     | found 0 job(s) in 20 queues
[2025-04-18 05:51:19] 2025-04-18 09:51:01,107 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-18 05:51:19] 2025-04-18 09:51:01,107 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-18 05:51:19] 2025-04-18 09:51:01,239 | INFO     | all data control threads have been joined
[2025-04-18 05:51:19] 2025-04-18 09:51:01,662 | INFO     | all job control threads have been joined
[2025-04-18 05:51:19] 2025-04-18 09:51:01,840 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-18 05:51:19] 2025-04-18 09:51:01,841 | INFO     | aborting loop
[2025-04-18 05:51:19] 2025-04-18 09:51:02,038 | INFO     | all payload control threads have been joined
[2025-04-18 05:51:19] 2025-04-18 09:51:02,106 | INFO     | [job] retrieve thread has finished
[2025-04-18 05:51:19] 2025-04-18 09:51:02,112 | INFO     | [job] queue monitor thread has finished
[2025-04-18 05:51:19] 2025-04-18 09:51:02,239 | INFO     | [data] control thread has finished
[2025-04-18 05:51:19] 2025-04-18 09:51:02,259 | INFO     | [job] create_data_payload thread has finished
[2025-04-18 05:51:19] 2025-04-18 09:51:02,425 | INFO     | [payload] validate_post thread has finished
[2025-04-18 05:51:19] 2025-04-18 09:51:02,547 | INFO     | [payload] validate_pre thread has finished
[2025-04-18 05:51:19] 2025-04-18 09:51:02,648 | INFO     | [payload] failed_post thread has finished
[2025-04-18 05:51:19] 2025-04-18 09:51:02,668 | INFO     | [job] control thread has finished
[2025-04-18 05:51:19] 2025-04-18 09:51:02,846 | INFO     | [job] job monitor thread has finished
[2025-04-18 05:51:19] 2025-04-18 09:51:02,904 | INFO     | [data] copytool_in thread has finished
[2025-04-18 05:51:19] 2025-04-18 09:51:03,033 | INFO     | [payload] execute_payloads thread has finished
[2025-04-18 05:51:19] 2025-04-18 09:51:03,044 | INFO     | [payload] control thread has finished
[2025-04-18 05:51:19] 2025-04-18 09:51:03,112 | INFO     | [data] copytool_out thread has finished
[2025-04-18 05:51:19] 2025-04-18 09:51:03,362 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-18 05:51:19] 2025-04-18 09:51:03,578 | INFO     | [job] validate thread has finished
[2025-04-18 05:51:19] 2025-04-18 09:51:07,368 | INFO     | [data] queue_monitor thread has finished
[2025-04-18 05:51:19] 2025-04-18 09:51:11,905 | INFO     | job.realtimelogging is not enabled
[2025-04-18 05:51:19] 2025-04-18 09:51:12,910 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-18 05:51:19] 2025-04-18 09:51:14,271 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140553154230080)>', '<ExcThread(monitor, started 140552116885248)>']
[2025-04-18 05:51:19] 2025-04-18 09:51:15,167 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-18 05:51:19] 2025-04-18 09:51:15,167 | INFO     | [monitor] control thread has ended
[2025-04-18 05:51:19] 2025-04-18 09:51:19,291 | INFO     | all workflow threads have been joined
[2025-04-18 05:51:19] 2025-04-18 09:51:19,291 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-18 05:51:19] 2025-04-18 09:51:19,291 | INFO     | traces error code: 0
[2025-04-18 05:51:19] 2025-04-18 09:51:19,292 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-18 05:51:19] 2025-04-18 09:51:19,391 [wrapper] ==== pilot stdout END ====
[2025-04-18 05:51:19] 2025-04-18 09:51:19,394 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-18 05:51:19] 2025-04-18 09:51:19,397 [wrapper] pilotpid: 16157
[2025-04-18 05:51:19] 2025-04-18 09:51:19,401 [wrapper] Pilot exit status: 0
[2025-04-18 05:51:19] 2025-04-18 09:51:19,416 [wrapper] pandaids: 6606172124
[2025-04-18 05:51:19] 2025-04-18 09:51:19,453 [wrapper] cleanup supervisor_pilot 10250 16158
[2025-04-18 05:51:19] 2025-04-18 09:51:19,457 [wrapper] Test setup, not cleaning
[2025-04-18 05:51:19] 2025-04-18 09:51:19,461 [wrapper] apfmon messages muted
[2025-04-18 05:51:19] 2025-04-18 09:51:19,465 [wrapper] ==== wrapper stdout END ====
[2025-04-18 05:51:19] 2025-04-18 09:51:19,469 [wrapper] ==== wrapper stderr END ====
[2025-04-18 05:51:19]  *** Error codes and diagnostics ***
[2025-04-18 05:51:19]     "exeErrorCode": 0,
[2025-04-18 05:51:19]     "exeErrorDiag": "",
[2025-04-18 05:51:19]     "pilotErrorCode": 0,
[2025-04-18 05:51:19]     "pilotErrorDiag": "",
[2025-04-18 05:51:19]  *** Listing of results directory ***
[2025-04-18 05:51:19] total 410716
[2025-04-18 05:51:19] -rw-r--r-- 1 boincer umatlas    495897 Apr 18 01:44 pilot3.tar.gz
[2025-04-18 05:51:19] -rwx------ 1 boincer umatlas     37140 Apr 18 01:47 runpilot2-wrapper.sh
[2025-04-18 05:51:19] -rw-r--r-- 1 boincer umatlas      5111 Apr 18 01:47 queuedata.json
[2025-04-18 05:51:19] -rw-r--r-- 1 boincer umatlas       100 Apr 18 04:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-18 05:51:19] -rwxr-xr-x 1 boincer umatlas      7986 Apr 18 04:28 run_atlas
[2025-04-18 05:51:19] -rw-r--r-- 1 boincer umatlas       105 Apr 18 04:28 job.xml
[2025-04-18 05:51:19] -rw-r--r-- 2 boincer umatlas 222293053 Apr 18 04:28 EVNT.44075481._002527.pool.root.1
[2025-04-18 05:51:19] -rw-r--r-- 2 boincer umatlas     17569 Apr 18 04:28 start_atlas.sh
[2025-04-18 05:51:19] drwxrwx--x 2 boincer umatlas      4096 Apr 18 04:28 shared
[2025-04-18 05:51:19] -rw-r--r-- 2 boincer umatlas    508878 Apr 18 04:28 input.tar.gz
[2025-04-18 05:51:19] -rw-r--r-- 1 boincer umatlas         0 Apr 18 04:28 boinc_lockfile
[2025-04-18 05:51:19] -rw-r--r-- 1 boincer umatlas      2577 Apr 18 04:28 pandaJob.out
[2025-04-18 05:51:19] -rw------- 1 boincer umatlas       424 Apr 18 04:28 setup.sh.local
[2025-04-18 05:51:19] -rw------- 1 boincer umatlas    990242 Apr 18 04:28 agis_schedconf.cvmfs.json
[2025-04-18 05:51:19] -rw------- 1 boincer umatlas   1618536 Apr 18 04:28 agis_ddmendpoints.agis.ALL.json
[2025-04-18 05:51:19] drwx------ 4 boincer umatlas      4096 Apr 18 04:28 pilot3
[2025-04-18 05:51:19] -rw-r--r-- 1 boincer umatlas      5868 Apr 18 05:46 init_data.xml
[2025-04-18 05:51:19] -rw------- 1 boincer umatlas 192786271 Apr 18 05:50 HITS.44075483._065002.pool.root.1
[2025-04-18 05:51:19] -rw-r--r-- 1 boincer umatlas       530 Apr 18 05:50 boinc_task_state.xml
[2025-04-18 05:51:19] -rw------- 1 boincer umatlas      1050 Apr 18 05:50 memory_monitor_summary.json
[2025-04-18 05:51:19] -rw------- 1 boincer umatlas    352065 Apr 18 05:50 log.44075483._065002.job.log.tgz.1
[2025-04-18 05:51:19] -rw------- 1 boincer umatlas        95 Apr 18 05:50 pilot_heartbeat.json
[2025-04-18 05:51:19] -rw------- 1 boincer umatlas      7754 Apr 18 05:50 heartbeat.json
[2025-04-18 05:51:19] -rw-r--r-- 1 boincer umatlas      8192 Apr 18 05:51 boinc_mmap_file
[2025-04-18 05:51:19] -rw-r--r-- 1 boincer umatlas        27 Apr 18 05:51 wrapper_checkpoint.txt
[2025-04-18 05:51:19] -rw------- 1 boincer umatlas      4548 Apr 18 05:51 pilotlog.txt
[2025-04-18 05:51:19] -rw------- 1 boincer umatlas    467367 Apr 18 05:51 log.44075483._065002.job.log.1
[2025-04-18 05:51:19] -rw------- 1 boincer umatlas       357 Apr 18 05:51 output.list
[2025-04-18 05:51:19] -rw-r--r-- 1 boincer umatlas       620 Apr 18 05:51 runtime_log
[2025-04-18 05:51:19] -rw------- 1 boincer umatlas    839680 Apr 18 05:51 result.tar.gz
[2025-04-18 05:51:19] -rw-r--r-- 1 boincer umatlas     11015 Apr 18 05:51 runtime_log.err
[2025-04-18 05:51:19] -rw------- 1 boincer umatlas       658 Apr 18 05:51 bDEODmsktP7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmTn4KDmmRWtwn.diag
[2025-04-18 05:51:19] -rw-r--r-- 1 boincer umatlas     21914 Apr 18 05:51 stderr.txt
[2025-04-18 05:51:19] HITS file was successfully produced:
[2025-04-18 05:51:19] -rw------- 1 boincer umatlas 192786271 Apr 18 05:50 shared/HITS.pool.root.1
[2025-04-18 05:51:19]  *** Contents of shared directory: ***
[2025-04-18 05:51:19] total 406692
[2025-04-18 05:51:19] -rw-r--r-- 2 boincer umatlas 222293053 Apr 18 04:28 ATLAS.root_0
[2025-04-18 05:51:19] -rw-r--r-- 2 boincer umatlas     17569 Apr 18 04:28 start_atlas.sh
[2025-04-18 05:51:19] -rw-r--r-- 2 boincer umatlas    508878 Apr 18 04:28 input.tar.gz
[2025-04-18 05:51:19] -rw------- 1 boincer umatlas 192786271 Apr 18 05:50 HITS.pool.root.1
[2025-04-18 05:51:19] -rw------- 1 boincer umatlas    839680 Apr 18 05:51 result.tar.gz
05:51:20 (12544): run_atlas exited; CPU time 46493.662926
05:51:20 (12544): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN