Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:40:54 (615135): wrapper (7.7.26015): starting
07:40:54 (615135): wrapper: running run_atlas (--nthreads 10)
[2025-04-18 07:40:54] Arguments: --nthreads 10
[2025-04-18 07:40:54] Threads: 10
[2025-04-18 07:40:54] Checking for CVMFS
[2025-04-18 07:40:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-18 07:40:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-18 07:40:56] Running cvmfs_config stat atlas.cern.ch
[2025-04-18 07:40:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-18 07:40:58] 2.12.6.0 1132017 52774 239240 145001 1 255 25043242 32935936 16142 130560 0 106530085 99.601 119325239 17554 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-04-18 07:40:58] CVMFS is ok
[2025-04-18 07:40:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-18 07:40:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-18 07:40:58] Further information can be found at the LHC@home message board.
[2025-04-18 07:40:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-18 07:40:58] Checking for apptainer binary...
[2025-04-18 07:40:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-18 07:40:58] Running /usr/bin/apptainer --version
[2025-04-18 07:40:58] apptainer version 1.4.0-1.el9
[2025-04-18 07:40:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-18 07:41:19] c-5-5.aglt2.org
[2025-04-18 07:41:19] apptainer works
[2025-04-18 07:41:19] Set ATHENA_PROC_NUMBER=10
[2025-04-18 07:41:19] Set ATHENA_CORE_NUMBER=10
[2025-04-18 07:41:19] Starting ATLAS job with PandaID=6606171734
[2025-04-18 07:41:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-18 17:34:02]  *** The last 200 lines of the pilot log: ***
[2025-04-18 17:34:02] 2025-04-18 21:33:37,720 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-18 17:34:02] 2025-04-18 21:33:40,225 | INFO     | monitor loop #1632: job 0:6606171734 is in state 'finished'
[2025-04-18 17:34:02] 2025-04-18 21:33:40,225 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-18 17:34:02] 2025-04-18 21:33:42,738 | INFO     | monitor loop #1633: job 0:6606171734 is in state 'finished'
[2025-04-18 17:34:02] 2025-04-18 21:33:42,773 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-18 17:34:02] 2025-04-18 21:33:42,766 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-18 17:34:02] 2025-04-18 21:33:42,788 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6606171734/memory_monitor_summary.json (trf name=prmon)
[2025-04-18 17:34:02] 2025-04-18 21:33:42,789 | INFO     | extracted standard info from prmon json
[2025-04-18 17:34:02] 2025-04-18 21:33:42,789 | INFO     | extracted standard memory fields from prmon json
[2025-04-18 17:34:02] 2025-04-18 21:33:42,789 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-18 17:34:02] 2025-04-18 21:33:42,806 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-18 17:34:02] 2025-04-18 21:33:42,806 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-18 17:34:02] 2025-04-18 21:33:42,967 | INFO     | fitting pss+swap vs Time
[2025-04-18 17:34:02] 2025-04-18 21:33:42,968 | INFO     | sum of square deviations: 59255011390.32628
[2025-04-18 17:34:02] 2025-04-18 21:33:43,064 | INFO     | sum of deviations: 626751457101.0695
[2025-04-18 17:34:02] 2025-04-18 21:33:43,065 | INFO     | mean x: 1744994369.6423612
[2025-04-18 17:34:02] 2025-04-18 21:33:43,065 | INFO     | mean y: 2153705.7430555555
[2025-04-18 17:34:02] 2025-04-18 21:33:43,065 | INFO     | -- intersect: -18454981617.414795
[2025-04-18 17:34:02] 2025-04-18 21:33:43,065 | INFO     | intersect: -18454981617.414795
[2025-04-18 17:34:02] 2025-04-18 21:33:43,120 | INFO     | chi2: 11.043740060471201
[2025-04-18 17:34:02] 2025-04-18 21:33:43,122 | INFO     | sum of square deviations: 57725537996.49769
[2025-04-18 17:34:02] 2025-04-18 21:33:43,190 | INFO     | sum of deviations: 673400595367.6644
[2025-04-18 17:34:02] 2025-04-18 21:33:43,190 | INFO     | mean x: 1744994217.1593695
[2025-04-18 17:34:02] 2025-04-18 21:33:43,191 | INFO     | mean y: 2158334.9597197897
[2025-04-18 17:34:02] 2025-04-18 21:33:43,191 | INFO     | -- intersect: -20354172424.91202
[2025-04-18 17:34:02] 2025-04-18 21:33:43,191 | INFO     | intersect: -20354172424.91202
[2025-04-18 17:34:02] 2025-04-18 21:33:43,192 | INFO     | chi2: 10.247932312132114
[2025-04-18 17:34:02] 2025-04-18 21:33:43,222 | INFO     | current chi2=10.247932312132114 (change=7.20596232781245 %)
[2025-04-18 17:34:02] 2025-04-18 21:33:43,222 | INFO     | right removable region: 570
[2025-04-18 17:34:02] 2025-04-18 21:33:43,223 | INFO     | sum of square deviations: 57724890301.81432
[2025-04-18 17:34:02] 2025-04-18 21:33:43,285 | INFO     | sum of deviations: 480513322575.55676
[2025-04-18 17:34:02] 2025-04-18 21:33:43,285 | INFO     | mean x: 1744994522.1576183
[2025-04-18 17:34:02] 2025-04-18 21:33:43,285 | INFO     | mean y: 2168272.527145359
[2025-04-18 17:34:02] 2025-04-18 21:33:43,286 | INFO     | -- intersect: -14523508802.54473
[2025-04-18 17:34:02] 2025-04-18 21:33:43,286 | INFO     | intersect: -14523508802.54473
[2025-04-18 17:34:02] 2025-04-18 21:33:43,287 | INFO     | chi2: 7.8192639046027335
[2025-04-18 17:34:02] 2025-04-18 21:33:43,314 | INFO     | current chi2=7.8192639046027335 (change=29.197320275671984 %)
[2025-04-18 17:34:02] 2025-04-18 21:33:43,315 | INFO     | sum of square deviations: 56221363172.87665
[2025-04-18 17:34:02] 2025-04-18 21:33:43,365 | INFO     | sum of deviations: 374180176693.1688
[2025-04-18 17:34:02] 2025-04-18 21:33:43,366 | INFO     | mean x: 1744994674.6713781
[2025-04-18 17:34:02] 2025-04-18 21:33:43,366 | INFO     | mean y: 2179054.9363957597
[2025-04-18 17:34:02] 2025-04-18 21:33:43,366 | INFO     | -- intersect: -11611598677.371944
[2025-04-18 17:34:02] 2025-04-18 21:33:43,366 | INFO     | intersect: -11611598677.371944
[2025-04-18 17:34:02] 2025-04-18 21:33:43,367 | INFO     | chi2: 6.218549837198822
[2025-04-18 17:34:02] 2025-04-18 21:33:43,367 | INFO     | current chi2=6.218549837198822 (change=20.471416324261252 %)
[2025-04-18 17:34:02] 2025-04-18 21:33:43,367 | INFO     | left removable region: 20
[2025-04-18 17:34:02] 2025-04-18 21:33:43,380 | INFO     | sum of square deviations: 51586547130.879944
[2025-04-18 17:34:02] 2025-04-18 21:33:43,458 | INFO     | sum of deviations: 261659191830.80008
[2025-04-18 17:34:02] 2025-04-18 21:33:43,491 | INFO     | mean x: 1744994796.72
[2025-04-18 17:34:02] 2025-04-18 21:33:43,491 | INFO     | mean y: 2200961.7
[2025-04-18 17:34:02] 2025-04-18 21:33:43,491 | INFO     | -- intersect: -8848826169.468218
[2025-04-18 17:34:02] 2025-04-18 21:33:43,492 | INFO     | intersect: -8848826169.468218
[2025-04-18 17:34:02] 2025-04-18 21:33:43,492 | INFO     | chi2: 3.5983943104206775
[2025-04-18 17:34:02] 2025-04-18 21:33:43,493 | INFO     | -- intersect: -8848826169.468218
[2025-04-18 17:34:02] 2025-04-18 21:33:43,493 | INFO     | current memory leak: 5.07 B/s (using 550 data points, chi2=3.60)
[2025-04-18 17:34:02] 2025-04-18 21:33:43,494 | INFO     | ..............................
[2025-04-18 17:34:02] 2025-04-18 21:33:43,494 | INFO     | . Timing measurements:
[2025-04-18 17:34:02] 2025-04-18 21:33:43,494 | INFO     | . get job = 1 s
[2025-04-18 17:34:02] 2025-04-18 21:33:43,494 | INFO     | . initial setup = 7 s
[2025-04-18 17:34:02] 2025-04-18 21:33:43,494 | INFO     | . payload setup = 67 s
[2025-04-18 17:34:02] 2025-04-18 21:33:43,494 | INFO     | . stage-in = 1 s
[2025-04-18 17:34:02] 2025-04-18 21:33:43,494 | INFO     | . payload execution = 35191 s
[2025-04-18 17:34:02] 2025-04-18 21:33:43,495 | INFO     | . stage-out = 8 s
[2025-04-18 17:34:02] 2025-04-18 21:33:43,495 | INFO     | . log creation = 1 s
[2025-04-18 17:34:02] 2025-04-18 21:33:43,547 | INFO     | ..............................
[2025-04-18 17:34:02] 2025-04-18 21:33:44,556 | INFO     | 
[2025-04-18 17:34:02] 2025-04-18 21:33:44,556 | INFO     | job summary report
[2025-04-18 17:34:02] 2025-04-18 21:33:44,556 | INFO     | --------------------------------------------------
[2025-04-18 17:34:02] 2025-04-18 21:33:44,556 | INFO     | PanDA job id: 6606171734
[2025-04-18 17:34:02] 2025-04-18 21:33:44,557 | INFO     | task id: 44075483
[2025-04-18 17:34:02] 2025-04-18 21:33:44,557 | INFO     | errors: (none)
[2025-04-18 17:34:02] 2025-04-18 21:33:44,557 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-18 17:34:02] 2025-04-18 21:33:44,557 | INFO     | pilot state: finished 
[2025-04-18 17:34:02] 2025-04-18 21:33:44,557 | INFO     | transexitcode: 0
[2025-04-18 17:34:02] 2025-04-18 21:33:44,557 | INFO     | exeerrorcode: 0
[2025-04-18 17:34:02] 2025-04-18 21:33:44,557 | INFO     | exeerrordiag: 
[2025-04-18 17:34:02] 2025-04-18 21:33:44,557 | INFO     | exitcode: 0
[2025-04-18 17:34:02] 2025-04-18 21:33:44,557 | INFO     | exitmsg: OK
[2025-04-18 17:34:02] 2025-04-18 21:33:44,557 | INFO     | cpuconsumptiontime: 52114 s
[2025-04-18 17:34:02] 2025-04-18 21:33:44,557 | INFO     | nevents: 400
[2025-04-18 17:34:02] 2025-04-18 21:33:44,558 | INFO     | neventsw: 0
[2025-04-18 17:34:02] 2025-04-18 21:33:44,558 | INFO     | pid: 651168
[2025-04-18 17:34:02] 2025-04-18 21:33:44,558 | INFO     | pgrp: 651168
[2025-04-18 17:34:02] 2025-04-18 21:33:44,558 | INFO     | corecount: 10
[2025-04-18 17:34:02] 2025-04-18 21:33:44,558 | INFO     | event service: False
[2025-04-18 17:34:02] 2025-04-18 21:33:44,558 | INFO     | sizes: {0: 2426546, 2: 2426602, 3: 2426829, 4: 2426829, 5: 2426857, 16: 2426913, 28: 2427069, 39: 2427097, 51: 2427271, 53: 2427359, 63: 2427387, 35263: 2465911, 3
[2025-04-18 17:34:02] 2025-04-18 21:33:44,558 | INFO     | --------------------------------------------------
[2025-04-18 17:34:02] 2025-04-18 21:33:44,558 | INFO     | 
[2025-04-18 17:34:02] 2025-04-18 21:33:44,559 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-18 17:34:02] 2025-04-18 21:33:44,900 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-18 17:34:02] 2025-04-18 21:33:44,900 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-18 17:34:02] 2025-04-18 21:33:44,900 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-18 17:34:02] 2025-04-18 21:33:44,900 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-18 17:34:02] 2025-04-18 21:33:44,900 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-18 17:34:02] 2025-04-18 21:33:44,900 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-18 17:34:02] 2025-04-18 21:33:44,901 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-18 17:34:02] 2025-04-18 21:33:44,901 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-18 17:34:02] 2025-04-18 21:33:44,937 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-18 17:34:02] 2025-04-18 21:33:44,937 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-18 17:34:02] 2025-04-18 21:33:44,937 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-18 17:34:02] 2025-04-18 21:33:44,937 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-18 17:34:02] 2025-04-18 21:33:44,938 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-18 17:34:02] 2025-04-18 21:33:44,938 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-18 17:34:02] 2025-04-18 21:33:44,938 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-18 17:34:02] 2025-04-18 21:33:44,938 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-18 17:34:02] 2025-04-18 21:33:44,938 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-18 17:34:02] 2025-04-18 21:33:44,938 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-18 17:34:02] 2025-04-18 21:33:44,938 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-18 17:34:02] 2025-04-18 21:33:44,962 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-18 17:34:02] 2025-04-18 21:33:44,962 | INFO     | job 6606171734 has completed (purged errors)
[2025-04-18 17:34:02] 2025-04-18 21:33:44,962 | INFO     | overall cleanup function is called
[2025-04-18 17:34:02] 2025-04-18 21:33:46,006 | INFO     | --- collectZombieJob: --- 10, [651168]
[2025-04-18 17:34:02] 2025-04-18 21:33:46,006 | INFO     | zombie collector waiting for pid 651168
[2025-04-18 17:34:02] 2025-04-18 21:33:46,006 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-18 17:34:02] 2025-04-18 21:33:46,006 | INFO     | collected zombie processes
[2025-04-18 17:34:02] 2025-04-18 21:33:46,007 | INFO     | will attempt to kill all subprocesses of pid=651168
[2025-04-18 17:34:02] 2025-04-18 21:33:48,598 | INFO     | process IDs to be killed: [651168] (in reverse order)
[2025-04-18 17:34:02] 2025-04-18 21:33:49,720 | WARNING  | found no corresponding commands to process id(s)
[2025-04-18 17:34:02] 2025-04-18 21:33:49,720 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-18 17:34:02] 2025-04-18 21:33:49,950 | INFO     | did not find any defunct processes belonging to 651168
[2025-04-18 17:34:02] 2025-04-18 21:33:50,002 | INFO     | did not find any defunct processes belonging to 651168
[2025-04-18 17:34:02] 2025-04-18 21:33:50,003 | INFO     | ready for new job
[2025-04-18 17:34:02] 2025-04-18 21:33:50,003 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-18 17:34:02] 2025-04-18 21:33:50,005 | INFO     | **************************************
[2025-04-18 17:34:02] 2025-04-18 21:33:50,005 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-18 17:34:02] 2025-04-18 21:33:50,005 | INFO     | **************************************
[2025-04-18 17:34:02] 2025-04-18 21:33:50,005 | INFO     | 
[2025-04-18 17:34:02] 2025-04-18 21:33:50,014 | INFO     | PID=631515 has CPU usage=5.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-04-18 17:34:02] 2025-04-18 21:33:50,015 | INFO     | .. there are 42 such processes running
[2025-04-18 17:34:02] 2025-04-18 21:33:50,031 | INFO     | architecture information:
[2025-04-18 17:34:02] 2025-04-18 21:33:50,048 | INFO     | executing command: cat /etc/os-release
[2025-04-18 17:34:02] 2025-04-18 21:33:50,190 | INFO     | cat /etc/os-release:
[2025-04-18 17:34:02] NAME="CentOS Linux"
[2025-04-18 17:34:02] VERSION="7 (Core)"
[2025-04-18 17:34:02] ID="centos"
[2025-04-18 17:34:02] ID_LIKE="rhel fedora"
[2025-04-18 17:34:02] VERSION_ID="7"
[2025-04-18 17:34:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-18 17:34:02] ANSI_COLOR="0;31"
[2025-04-18 17:34:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-18 17:34:02] HOME_URL="https://www.centos.org/"
[2025-04-18 17:34:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-18 17:34:02] 
[2025-04-18 17:34:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-18 17:34:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-18 17:34:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-18 17:34:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-18 17:34:02] 
[2025-04-18 17:34:02] 2025-04-18 21:33:50,191 | INFO     | **************************************
[2025-04-18 17:34:02] 2025-04-18 21:33:50,708 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-18 17:34:02] 2025-04-18 21:33:50,896 | INFO     | sufficient remaining disk space (75637981184 B)
[2025-04-18 17:34:02] 2025-04-18 21:33:50,897 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-18 17:34:02] 2025-04-18 21:33:50,897 | INFO     | current server update state: UPDATING_FINAL
[2025-04-18 17:34:02] 2025-04-18 21:33:50,897 | INFO     | update_server=False
[2025-04-18 17:34:02] 2025-04-18 21:33:50,897 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-18 17:34:02] 2025-04-18 21:33:50,907 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-18 17:34:02] 2025-04-18 21:33:50,907 | INFO     | found 0 job(s) in 20 queues
[2025-04-18 17:34:02] 2025-04-18 21:33:50,908 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-18 17:34:02] 2025-04-18 21:33:50,908 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-18 17:34:02] 2025-04-18 21:33:50,915 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-18 17:34:02] 2025-04-18 21:33:51,207 | INFO     | all payload control threads have been joined
[2025-04-18 17:34:02] 2025-04-18 21:33:51,404 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-18 17:34:02] 2025-04-18 21:33:51,404 | INFO     | aborting loop
[2025-04-18 17:34:02] 2025-04-18 21:33:51,580 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-18 17:34:02] 2025-04-18 21:33:51,643 | INFO     | all job control threads have been joined
[2025-04-18 17:34:02] 2025-04-18 21:33:51,711 | INFO     | all data control threads have been joined
[2025-04-18 17:34:02] 2025-04-18 21:33:51,903 | INFO     | [job] retrieve thread has finished
[2025-04-18 17:34:02] 2025-04-18 21:33:52,213 | INFO     | [payload] control thread has finished
[2025-04-18 17:34:02] 2025-04-18 21:33:52,218 | INFO     | [payload] failed_post thread has finished
[2025-04-18 17:34:02] 2025-04-18 21:33:52,405 | INFO     | [data] copytool_in thread has finished
[2025-04-18 17:34:02] 2025-04-18 21:33:52,426 | INFO     | [payload] validate_pre thread has finished
[2025-04-18 17:34:02] 2025-04-18 21:33:52,427 | INFO     | [job] job monitor thread has finished
[2025-04-18 17:34:02] 2025-04-18 21:33:52,649 | INFO     | [job] control thread has finished
[2025-04-18 17:34:02] 2025-04-18 21:33:52,693 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-18 17:34:02] 2025-04-18 21:33:52,717 | INFO     | [data] control thread has finished
[2025-04-18 17:34:02] 2025-04-18 21:33:52,748 | INFO     | [job] validate thread has finished
[2025-04-18 17:34:02] 2025-04-18 21:33:52,868 | INFO     | [payload] execute_payloads thread has finished
[2025-04-18 17:34:02] 2025-04-18 21:33:52,890 | INFO     | [job] create_data_payload thread has finished
[2025-04-18 17:34:02] 2025-04-18 21:33:53,033 | INFO     | [payload] validate_post thread has finished
[2025-04-18 17:34:02] 2025-04-18 21:33:53,598 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-18 17:34:02] 2025-04-18 21:33:53,602 | INFO     | [data] copytool_out thread has finished
[2025-04-18 17:34:02] 2025-04-18 21:33:54,605 | INFO     | [job] queue monitor thread has finished
[2025-04-18 17:34:02] 2025-04-18 21:33:54,933 | INFO     | [data] queue_monitor thread has finished
[2025-04-18 17:34:02] 2025-04-18 21:33:55,268 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140451894871872)>', '<ExcThread(monitor, started 140451621345024)>']
[2025-04-18 17:34:02] 2025-04-18 21:33:55,965 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-18 17:34:02] 2025-04-18 21:33:55,965 | INFO     | [monitor] control thread has ended
[2025-04-18 17:34:02] 2025-04-18 21:34:00,318 | INFO     | all workflow threads have been joined
[2025-04-18 17:34:02] 2025-04-18 21:34:00,318 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-18 17:34:02] 2025-04-18 21:34:00,319 | INFO     | traces error code: 0
[2025-04-18 17:34:02] 2025-04-18 21:34:00,319 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-18 17:34:02] 2025-04-18 21:34:00,707 [wrapper] ==== pilot stdout END ====
[2025-04-18 17:34:02] 2025-04-18 21:34:00,729 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-18 17:34:02] 2025-04-18 21:34:00,766 [wrapper] pilotpid: 631515
[2025-04-18 17:34:02] 2025-04-18 21:34:00,802 [wrapper] Pilot exit status: 0
[2025-04-18 17:34:02] 2025-04-18 21:34:01,019 [wrapper] pandaids: 6606171734
[2025-04-18 17:34:02] 2025-04-18 21:34:01,533 [wrapper] cleanup supervisor_pilot 3316645 631516
[2025-04-18 17:34:02] 2025-04-18 21:34:01,537 [wrapper] Test setup, not cleaning
[2025-04-18 17:34:02] 2025-04-18 21:34:01,540 [wrapper] apfmon messages muted
[2025-04-18 17:34:02] 2025-04-18 21:34:01,543 [wrapper] ==== wrapper stdout END ====
[2025-04-18 17:34:02] 2025-04-18 21:34:01,546 [wrapper] ==== wrapper stderr END ====
[2025-04-18 17:34:02]  *** Error codes and diagnostics ***
[2025-04-18 17:34:02]     "exeErrorCode": 0,
[2025-04-18 17:34:02]     "exeErrorDiag": "",
[2025-04-18 17:34:02]     "pilotErrorCode": 0,
[2025-04-18 17:34:02]     "pilotErrorDiag": "",
[2025-04-18 17:34:02]  *** Listing of results directory ***
[2025-04-18 17:34:02] total 421100
[2025-04-18 17:34:02] -rw-r--r--. 1 boincer umatlas    495897 Apr 18 01:10 pilot3.tar.gz
[2025-04-18 17:34:02] -rw-r--r--. 1 boincer umatlas      5111 Apr 18 01:26 queuedata.json
[2025-04-18 17:34:02] -rwx------. 1 boincer umatlas     37140 Apr 18 01:27 runpilot2-wrapper.sh
[2025-04-18 17:34:02] -rw-r--r--. 1 boincer umatlas       100 Apr 18 07:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-18 17:34:02] -rwxr-xr-x. 1 boincer umatlas      7986 Apr 18 07:40 run_atlas
[2025-04-18 17:34:02] -rw-r--r--. 1 boincer umatlas       105 Apr 18 07:40 job.xml
[2025-04-18 17:34:02] -rw-r--r--. 2 boincer umatlas 222265718 Apr 18 07:40 EVNT.44075481._002517.pool.root.1
[2025-04-18 17:34:02] -rw-r--r--. 2 boincer umatlas     17569 Apr 18 07:40 start_atlas.sh
[2025-04-18 17:34:02] drwxrwx--x. 2 boincer umatlas      4096 Apr 18 07:40 shared
[2025-04-18 17:34:02] -rw-r--r--. 2 boincer umatlas    508897 Apr 18 07:40 input.tar.gz
[2025-04-18 17:34:02] -rw-r--r--. 1 boincer umatlas         0 Apr 18 07:40 boinc_lockfile
[2025-04-18 17:34:02] -rw-r--r--. 1 boincer umatlas      2578 Apr 18 07:41 pandaJob.out
[2025-04-18 17:34:02] -rw-------. 1 boincer umatlas       467 Apr 18 07:41 setup.sh.local
[2025-04-18 17:34:02] -rw-------. 1 boincer umatlas    990572 Apr 18 07:43 agis_schedconf.cvmfs.json
[2025-04-18 17:34:02] drwx------. 4 boincer umatlas      4096 Apr 18 07:43 pilot3
[2025-04-18 17:34:02] -rw-r--r--. 1 boincer umatlas      6672 Apr 18 17:30 init_data.xml
[2025-04-18 17:34:02] -rw-------. 1 boincer umatlas 199280447 Apr 18 17:30 HITS.44075483._064775.pool.root.1
[2025-04-18 17:34:02] -rw-r--r--. 1 boincer umatlas       531 Apr 18 17:31 boinc_task_state.xml
[2025-04-18 17:34:02] -rw-------. 1 boincer umatlas      1038 Apr 18 17:32 memory_monitor_summary.json
[2025-04-18 17:34:02] -rw-------. 1 boincer umatlas   1618536 Apr 18 17:32 agis_ddmendpoints.agis.ALL.json
[2025-04-18 17:34:02] -rw-------. 1 boincer umatlas    584334 Apr 18 17:32 log.44075483._064775.job.log.tgz.1
[2025-04-18 17:34:02] -rw-------. 1 boincer umatlas        95 Apr 18 17:33 pilot_heartbeat.json
[2025-04-18 17:34:02] -rw-------. 1 boincer umatlas      7716 Apr 18 17:33 heartbeat.json
[2025-04-18 17:34:02] -rw-r--r--. 1 boincer umatlas      8192 Apr 18 17:33 boinc_mmap_file
[2025-04-18 17:34:02] -rw-r--r--. 1 boincer umatlas        28 Apr 18 17:33 wrapper_checkpoint.txt
[2025-04-18 17:34:02] -rw-------. 1 boincer umatlas      4870 Apr 18 17:34 pilotlog.txt
[2025-04-18 17:34:02] -rw-------. 1 boincer umatlas   2313732 Apr 18 17:34 log.44075483._064775.job.log.1
[2025-04-18 17:34:02] -rw-------. 1 boincer umatlas       357 Apr 18 17:34 output.list
[2025-04-18 17:34:02] -rw-r--r--. 1 boincer umatlas       620 Apr 18 17:34 runtime_log
[2025-04-18 17:34:02] -rw-------. 1 boincer umatlas   2918400 Apr 18 17:34 result.tar.gz
[2025-04-18 17:34:02] -rw-r--r--. 1 boincer umatlas     11406 Apr 18 17:34 runtime_log.err
[2025-04-18 17:34:02] -rw-------. 1 boincer umatlas       656 Apr 18 17:34 AvGODmqQtP7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmEWeLDmCowxqm.diag
[2025-04-18 17:34:02] -rw-r--r--. 1 boincer umatlas     21289 Apr 18 17:34 stderr.txt
[2025-04-18 17:34:03] HITS file was successfully produced:
[2025-04-18 17:34:03] -rw-------. 1 boincer umatlas 199280447 Apr 18 17:30 shared/HITS.pool.root.1
[2025-04-18 17:34:03]  *** Contents of shared directory: ***
[2025-04-18 17:34:03] total 415048
[2025-04-18 17:34:03] -rw-r--r--. 2 boincer umatlas 222265718 Apr 18 07:40 ATLAS.root_0
[2025-04-18 17:34:03] -rw-r--r--. 2 boincer umatlas     17569 Apr 18 07:40 start_atlas.sh
[2025-04-18 17:34:03] -rw-r--r--. 2 boincer umatlas    508897 Apr 18 07:40 input.tar.gz
[2025-04-18 17:34:03] -rw-------. 1 boincer umatlas 199280447 Apr 18 17:30 HITS.pool.root.1
[2025-04-18 17:34:03] -rw-------. 1 boincer umatlas   2918400 Apr 18 17:34 result.tar.gz
17:34:04 (615135): run_atlas exited; CPU time 53561.655026
17:34:04 (615135): called boinc_finish(0)

</stderr_txt>
]]>

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