Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:14:12 (599659): wrapper (7.7.26015): starting
20:14:12 (599659): wrapper: running run_atlas (--nthreads 6)
[2025-04-18 20:14:12] Arguments: --nthreads 6
[2025-04-18 20:14:12] Threads: 6
[2025-04-18 20:14:12] Checking for CVMFS
[2025-04-18 20:14:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-18 20:14:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-18 20:14:12] Running cvmfs_config stat atlas.cern.ch
[2025-04-18 20:14:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-18 20:14:13] 2.11.5.0 362492 644 65132 145000 4 55 16776024 20971520 929 130560 0 635041 99.993 157337 68 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-04-18 20:14:13] CVMFS is ok
[2025-04-18 20:14:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-18 20:14:13] Checking for apptainer binary...
[2025-04-18 20:14:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-18 20:14:13] Running /usr/bin/apptainer --version
[2025-04-18 20:14:13] apptainer version 1.3.6-1.el9
[2025-04-18 20:14:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-18 20:14:13] testio005
[2025-04-18 20:14:13] apptainer works
[2025-04-18 20:14:13] Set ATHENA_PROC_NUMBER=6
[2025-04-18 20:14:13] Set ATHENA_CORE_NUMBER=6
[2025-04-18 20:14:13] Starting ATLAS job with PandaID=6606171492
[2025-04-18 20:14:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-18 22:05:46]  *** The last 200 lines of the pilot log: ***
[2025-04-18 22:05:46] 2025-04-18 13:05:33,832 | INFO     | mean y: 2281741.138888889
[2025-04-18 22:05:46] 2025-04-18 13:05:33,832 | INFO     | -- intersect: -220993650729.57874
[2025-04-18 22:05:46] 2025-04-18 13:05:33,832 | INFO     | intersect: -220993650729.57874
[2025-04-18 22:05:46] 2025-04-18 13:05:33,832 | INFO     | chi2: 6.14209886752507
[2025-04-18 22:05:46] 2025-04-18 13:05:33,832 | INFO     | sum of square deviations: 338804492.0
[2025-04-18 22:05:46] 2025-04-18 13:05:33,832 | INFO     | sum of deviations: 53521348028.0
[2025-04-18 22:05:46] 2025-04-18 13:05:33,832 | INFO     | mean x: 1744978000.0
[2025-04-18 22:05:46] 2025-04-18 13:05:33,833 | INFO     | mean y: 2292961.2330097086
[2025-04-18 22:05:46] 2025-04-18 13:05:33,833 | INFO     | -- intersect: -275653954356.773
[2025-04-18 22:05:46] 2025-04-18 13:05:33,833 | INFO     | intersect: -275653954356.773
[2025-04-18 22:05:46] 2025-04-18 13:05:33,833 | INFO     | chi2: 5.396003435991914
[2025-04-18 22:05:46] 2025-04-18 13:05:33,833 | INFO     | current chi2=5.396003435991914 (change=12.147239040354163 %)
[2025-04-18 22:05:46] 2025-04-18 13:05:33,833 | INFO     | right removable region: 102
[2025-04-18 22:05:46] 2025-04-18 13:05:33,833 | INFO     | sum of square deviations: 338804492.0
[2025-04-18 22:05:46] 2025-04-18 13:05:33,833 | INFO     | sum of deviations: 25653698779.000008
[2025-04-18 22:05:46] 2025-04-18 13:05:33,834 | INFO     | mean x: 1744978305.0
[2025-04-18 22:05:46] 2025-04-18 13:05:33,834 | INFO     | mean y: 2351576.6796116503
[2025-04-18 22:05:46] 2025-04-18 13:05:33,834 | INFO     | -- intersect: -132124432068.08978
[2025-04-18 22:05:46] 2025-04-18 13:05:33,834 | INFO     | intersect: -132124432068.08978
[2025-04-18 22:05:46] 2025-04-18 13:05:33,834 | INFO     | chi2: 3.7646885444956104
[2025-04-18 22:05:46] 2025-04-18 13:05:33,834 | INFO     | current chi2=3.7646885444956104 (change=38.70680648921932 %)
[2025-04-18 22:05:46] 2025-04-18 13:05:33,834 | INFO     | sum of square deviations: 291817564.5
[2025-04-18 22:05:46] 2025-04-18 13:05:33,834 | INFO     | sum of deviations: 5072373260.0
[2025-04-18 22:05:46] 2025-04-18 13:05:33,835 | INFO     | mean x: 1744978457.5
[2025-04-18 22:05:46] 2025-04-18 13:05:33,835 | INFO     | mean y: 2418321.0408163266
[2025-04-18 22:05:46] 2025-04-18 13:05:33,835 | INFO     | -- intersect: -30328799343.20313
[2025-04-18 22:05:46] 2025-04-18 13:05:33,835 | INFO     | intersect: -30328799343.20313
[2025-04-18 22:05:46] 2025-04-18 13:05:33,835 | INFO     | chi2: 2.054571164745756
[2025-04-18 22:05:46] 2025-04-18 13:05:33,835 | INFO     | current chi2=2.054571164745756 (change=45.425202099393715 %)
[2025-04-18 22:05:46] 2025-04-18 13:05:33,835 | INFO     | sum of square deviations: 249388862.0
[2025-04-18 22:05:46] 2025-04-18 13:05:33,835 | INFO     | sum of deviations: -11998427818.0
[2025-04-18 22:05:46] 2025-04-18 13:05:33,835 | INFO     | mean x: 1744978610.0
[2025-04-18 22:05:46] 2025-04-18 13:05:33,836 | INFO     | mean y: 2479417.301075269
[2025-04-18 22:05:46] 2025-04-18 13:05:33,836 | INFO     | -- intersect: 83955707031.92876
[2025-04-18 22:05:46] 2025-04-18 13:05:33,836 | INFO     | intersect: 83955707031.92876
[2025-04-18 22:05:46] 2025-04-18 13:05:33,836 | INFO     | chi2: 0.7514666678039855
[2025-04-18 22:05:46] 2025-04-18 13:05:33,836 | INFO     | current chi2=0.7514666678039855 (change=63.42464643238696 %)
[2025-04-18 22:05:46] 2025-04-18 13:05:33,836 | INFO     | sum of square deviations: 211285822.0
[2025-04-18 22:05:46] 2025-04-18 13:05:33,836 | INFO     | sum of deviations: -12473170871.0
[2025-04-18 22:05:46] 2025-04-18 13:05:33,836 | INFO     | mean x: 1744978762.5
[2025-04-18 22:05:46] 2025-04-18 13:05:33,836 | INFO     | mean y: 2481061.590909091
[2025-04-18 22:05:46] 2025-04-18 13:05:33,836 | INFO     | -- intersect: 103016578576.04045
[2025-04-18 22:05:46] 2025-04-18 13:05:33,837 | INFO     | intersect: 103016578576.04045
[2025-04-18 22:05:46] 2025-04-18 13:05:33,837 | INFO     | chi2: 0.712906976287554
[2025-04-18 22:05:46] 2025-04-18 13:05:33,837 | INFO     | current chi2=0.712906976287554 (change=5.131257734839355 %)
[2025-04-18 22:05:46] 2025-04-18 13:05:33,837 | INFO     | left removable region: 40
[2025-04-18 22:05:46] 2025-04-18 13:05:33,837 | INFO     | sum of square deviations: 73882315.5
[2025-04-18 22:05:46] 2025-04-18 13:05:33,837 | INFO     | sum of deviations: -1917343948.0
[2025-04-18 22:05:46] 2025-04-18 13:05:33,837 | INFO     | mean x: 1744979189.5
[2025-04-18 22:05:46] 2025-04-18 13:05:33,837 | INFO     | mean y: 2478921.4838709678
[2025-04-18 22:05:46] 2025-04-18 13:05:33,837 | INFO     | -- intersect: 45287000200.10799
[2025-04-18 22:05:46] 2025-04-18 13:05:33,837 | INFO     | intersect: 45287000200.10799
[2025-04-18 22:05:46] 2025-04-18 13:05:33,838 | INFO     | chi2: 0.004660436363802019
[2025-04-18 22:05:46] 2025-04-18 13:05:33,838 | INFO     | -- intersect: 45287000200.10799
[2025-04-18 22:05:46] 2025-04-18 13:05:33,838 | INFO     | current memory leak: -25.95 B/s (using 62 data points, chi2=0.00)
[2025-04-18 22:05:46] 2025-04-18 13:05:33,838 | INFO     | ..............................
[2025-04-18 22:05:46] 2025-04-18 13:05:33,838 | INFO     | . Timing measurements:
[2025-04-18 22:05:46] 2025-04-18 13:05:33,838 | INFO     | . get job = 0 s
[2025-04-18 22:05:46] 2025-04-18 13:05:33,838 | INFO     | . initial setup = 5 s
[2025-04-18 22:05:46] 2025-04-18 13:05:33,838 | INFO     | . payload setup = 4 s
[2025-04-18 22:05:46] 2025-04-18 13:05:33,838 | INFO     | . stage-in = 0 s
[2025-04-18 22:05:46] 2025-04-18 13:05:33,838 | INFO     | . payload execution = 6550 s
[2025-04-18 22:05:46] 2025-04-18 13:05:33,838 | INFO     | . stage-out = 0 s
[2025-04-18 22:05:46] 2025-04-18 13:05:33,839 | INFO     | . log creation = 0 s
[2025-04-18 22:05:46] 2025-04-18 13:05:33,839 | INFO     | ..............................
[2025-04-18 22:05:46] 2025-04-18 13:05:34,253 | INFO     | 
[2025-04-18 22:05:46] 2025-04-18 13:05:34,254 | INFO     | job summary report
[2025-04-18 22:05:46] 2025-04-18 13:05:34,254 | INFO     | --------------------------------------------------
[2025-04-18 22:05:46] 2025-04-18 13:05:34,254 | INFO     | PanDA job id: 6606171492
[2025-04-18 22:05:46] 2025-04-18 13:05:34,254 | INFO     | task id: 44075483
[2025-04-18 22:05:46] 2025-04-18 13:05:34,254 | INFO     | errors: (none)
[2025-04-18 22:05:46] 2025-04-18 13:05:34,254 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-18 22:05:46] 2025-04-18 13:05:34,254 | INFO     | pilot state: finished 
[2025-04-18 22:05:46] 2025-04-18 13:05:34,254 | INFO     | transexitcode: 0
[2025-04-18 22:05:46] 2025-04-18 13:05:34,255 | INFO     | exeerrorcode: 0
[2025-04-18 22:05:46] 2025-04-18 13:05:34,255 | INFO     | exeerrordiag: 
[2025-04-18 22:05:46] 2025-04-18 13:05:34,255 | INFO     | exitcode: 0
[2025-04-18 22:05:46] 2025-04-18 13:05:34,255 | INFO     | exitmsg: OK
[2025-04-18 22:05:46] 2025-04-18 13:05:34,255 | INFO     | cpuconsumptiontime: 32855 s
[2025-04-18 22:05:46] 2025-04-18 13:05:34,255 | INFO     | nevents: 400
[2025-04-18 22:05:46] 2025-04-18 13:05:34,255 | INFO     | neventsw: 0
[2025-04-18 22:05:46] 2025-04-18 13:05:34,255 | INFO     | pid: 609911
[2025-04-18 22:05:46] 2025-04-18 13:05:34,255 | INFO     | pgrp: 609911
[2025-04-18 22:05:46] 2025-04-18 13:05:34,255 | INFO     | corecount: 6
[2025-04-18 22:05:46] 2025-04-18 13:05:34,255 | INFO     | event service: False
[2025-04-18 22:05:46] 2025-04-18 13:05:34,255 | INFO     | sizes: {0: 2425945, 1: 2426801, 5: 2427007, 12: 2427063, 6559: 2454030, 6561: 2463155, 6654: 2463269}
[2025-04-18 22:05:46] 2025-04-18 13:05:34,256 | INFO     | --------------------------------------------------
[2025-04-18 22:05:46] 2025-04-18 13:05:34,256 | INFO     | 
[2025-04-18 22:05:46] 2025-04-18 13:05:34,256 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2025-04-18 22:05:46] 2025-04-18 13:05:34,274 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-18 22:05:46] 2025-04-18 13:05:34,274 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-18 22:05:46] 2025-04-18 13:05:34,274 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-18 22:05:46] 2025-04-18 13:05:34,274 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-18 22:05:46] 2025-04-18 13:05:34,274 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-18 22:05:46] 2025-04-18 13:05:34,274 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-18 22:05:46] 2025-04-18 13:05:34,275 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-18 22:05:46] 2025-04-18 13:05:34,275 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-18 22:05:46] 2025-04-18 13:05:34,275 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-18 22:05:46] 2025-04-18 13:05:34,275 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-18 22:05:46] 2025-04-18 13:05:34,275 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-18 22:05:46] 2025-04-18 13:05:34,275 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-18 22:05:46] 2025-04-18 13:05:34,275 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-18 22:05:46] 2025-04-18 13:05:34,275 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-18 22:05:46] 2025-04-18 13:05:34,275 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-18 22:05:46] 2025-04-18 13:05:34,275 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-18 22:05:46] 2025-04-18 13:05:34,275 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-18 22:05:46] 2025-04-18 13:05:34,275 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-18 22:05:46] 2025-04-18 13:05:34,275 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-18 22:05:46] 2025-04-18 13:05:34,276 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-18 22:05:46] 2025-04-18 13:05:34,276 | INFO     | job 6606171492 has completed (purged errors)
[2025-04-18 22:05:46] 2025-04-18 13:05:34,276 | INFO     | overall cleanup function is called
[2025-04-18 22:05:46] 2025-04-18 13:05:35,282 | INFO     | --- collectZombieJob: --- 10, [609911]
[2025-04-18 22:05:46] 2025-04-18 13:05:35,282 | INFO     | zombie collector waiting for pid 609911
[2025-04-18 22:05:46] 2025-04-18 13:05:35,282 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-18 22:05:46] 2025-04-18 13:05:35,282 | INFO     | collected zombie processes
[2025-04-18 22:05:46] 2025-04-18 13:05:35,282 | INFO     | will attempt to kill all subprocesses of pid=609911
[2025-04-18 22:05:46] 2025-04-18 13:05:35,447 | INFO     | process IDs to be killed: [609911] (in reverse order)
[2025-04-18 22:05:46] 2025-04-18 13:05:35,494 | WARNING  | found no corresponding commands to process id(s)
[2025-04-18 22:05:46] 2025-04-18 13:05:35,494 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-18 22:05:46] 2025-04-18 13:05:35,505 | INFO     | did not find any defunct processes belonging to 609911
[2025-04-18 22:05:46] 2025-04-18 13:05:35,513 | INFO     | did not find any defunct processes belonging to 609911
[2025-04-18 22:05:46] 2025-04-18 13:05:35,514 | INFO     | ready for new job
[2025-04-18 22:05:46] 2025-04-18 13:05:35,514 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-18 22:05:46] 2025-04-18 13:05:35,515 | INFO     | **************************************
[2025-04-18 22:05:46] 2025-04-18 13:05:35,515 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-18 22:05:46] 2025-04-18 13:05:35,515 | INFO     | **************************************
[2025-04-18 22:05:46] 2025-04-18 13:05:35,516 | INFO     | 
[2025-04-18 22:05:46] 2025-04-18 13:05:35,517 | INFO     | architecture information:
[2025-04-18 22:05:46] 2025-04-18 13:05:35,517 | INFO     | executing command: cat /etc/os-release
[2025-04-18 22:05:46] 2025-04-18 13:05:35,531 | INFO     | cat /etc/os-release:
[2025-04-18 22:05:46] NAME="CentOS Linux"
[2025-04-18 22:05:46] VERSION="7 (Core)"
[2025-04-18 22:05:46] ID="centos"
[2025-04-18 22:05:46] ID_LIKE="rhel fedora"
[2025-04-18 22:05:46] VERSION_ID="7"
[2025-04-18 22:05:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-18 22:05:46] ANSI_COLOR="0;31"
[2025-04-18 22:05:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-18 22:05:46] HOME_URL="https://www.centos.org/"
[2025-04-18 22:05:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-18 22:05:46] 
[2025-04-18 22:05:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-18 22:05:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-18 22:05:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-18 22:05:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-18 22:05:46] 
[2025-04-18 22:05:46] 2025-04-18 13:05:35,531 | INFO     | **************************************
[2025-04-18 22:05:46] 2025-04-18 13:05:35,556 | INFO     | PID=603362 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-04-18 22:05:46] 2025-04-18 13:05:35,556 | INFO     | .. there are 2 such processes running
[2025-04-18 22:05:46] 2025-04-18 13:05:36,033 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2025-04-18 22:05:46] 2025-04-18 13:05:36,047 | INFO     | sufficient remaining disk space (100072947712 B)
[2025-04-18 22:05:46] 2025-04-18 13:05:36,047 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-18 22:05:46] 2025-04-18 13:05:36,047 | INFO     | current server update state: UPDATING_FINAL
[2025-04-18 22:05:46] 2025-04-18 13:05:36,047 | INFO     | update_server=False
[2025-04-18 22:05:46] 2025-04-18 13:05:36,047 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-18 22:05:46] 2025-04-18 13:05:36,047 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-18 22:05:46] 2025-04-18 13:05:36,048 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-18 22:05:46] 2025-04-18 13:05:36,048 | INFO     | aborting loop
[2025-04-18 22:05:46] 2025-04-18 13:05:36,048 | INFO     | found 0 job(s) in 20 queues
[2025-04-18 22:05:46] 2025-04-18 13:05:36,048 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-18 22:05:46] 2025-04-18 13:05:36,048 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-18 22:05:46] 2025-04-18 13:05:36,675 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-18 22:05:46] 2025-04-18 13:05:36,963 | INFO     | all job control threads have been joined
[2025-04-18 22:05:46] 2025-04-18 13:05:37,027 | INFO     | all data control threads have been joined
[2025-04-18 22:05:46] 2025-04-18 13:05:37,052 | INFO     | [job] retrieve thread has finished
[2025-04-18 22:05:46] 2025-04-18 13:05:37,053 | INFO     | [job] job monitor thread has finished
[2025-04-18 22:05:46] 2025-04-18 13:05:37,234 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-18 22:05:46] 2025-04-18 13:05:37,258 | INFO     | [payload] failed_post thread has finished
[2025-04-18 22:05:46] 2025-04-18 13:05:37,362 | INFO     | all payload control threads have been joined
[2025-04-18 22:05:46] 2025-04-18 13:05:37,539 | INFO     | [job] create_data_payload thread has finished
[2025-04-18 22:05:46] 2025-04-18 13:05:37,544 | INFO     | [payload] execute_payloads thread has finished
[2025-04-18 22:05:46] 2025-04-18 13:05:37,740 | INFO     | [data] copytool_in thread has finished
[2025-04-18 22:05:46] 2025-04-18 13:05:37,794 | INFO     | [payload] validate_post thread has finished
[2025-04-18 22:05:46] 2025-04-18 13:05:37,931 | INFO     | [job] validate thread has finished
[2025-04-18 22:05:46] 2025-04-18 13:05:37,968 | INFO     | [job] control thread has finished
[2025-04-18 22:05:46] 2025-04-18 13:05:38,032 | INFO     | [data] control thread has finished
[2025-04-18 22:05:46] 2025-04-18 13:05:38,280 | INFO     | [payload] validate_pre thread has finished
[2025-04-18 22:05:46] 2025-04-18 13:05:38,359 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-18 22:05:46] 2025-04-18 13:05:38,364 | INFO     | [payload] control thread has finished
[2025-04-18 22:05:46] 2025-04-18 13:05:38,680 | INFO     | [data] copytool_out thread has finished
[2025-04-18 22:05:46] 2025-04-18 13:05:38,926 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-18 22:05:46] 2025-04-18 13:05:39,932 | INFO     | [job] queue monitor thread has finished
[2025-04-18 22:05:46] 2025-04-18 13:05:41,240 | INFO     | [data] queue_monitor thread has finished
[2025-04-18 22:05:46] 2025-04-18 13:05:41,284 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140342388176704)>', '<ExcThread(monitor, started 140341646702336)>']
[2025-04-18 22:05:46] 2025-04-18 13:05:42,078 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-18 22:05:46] 2025-04-18 13:05:42,078 | INFO     | [monitor] control thread has ended
[2025-04-18 22:05:46] 2025-04-18 13:05:46,289 | INFO     | all workflow threads have been joined
[2025-04-18 22:05:46] 2025-04-18 13:05:46,289 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-18 22:05:46] 2025-04-18 13:05:46,289 | INFO     | traces error code: 0
[2025-04-18 22:05:46] 2025-04-18 13:05:46,289 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-18 22:05:46] 2025-04-18 13:05:46,394 [wrapper] ==== pilot stdout END ====
[2025-04-18 22:05:46] 2025-04-18 13:05:46,397 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-18 22:05:46] 2025-04-18 13:05:46,399 [wrapper] pilotpid: 603362
[2025-04-18 22:05:46] 2025-04-18 13:05:46,402 [wrapper] Pilot exit status: 0
[2025-04-18 22:05:46] 2025-04-18 13:05:46,412 [wrapper] pandaids: 6606171492
[2025-04-18 22:05:46] 2025-04-18 13:05:46,444 [wrapper] cleanup supervisor_pilot  650822 603363
[2025-04-18 22:05:46] 2025-04-18 13:05:46,447 [wrapper] Test setup, not cleaning
[2025-04-18 22:05:46] 2025-04-18 13:05:46,449 [wrapper] apfmon messages muted
[2025-04-18 22:05:46] 2025-04-18 13:05:46,451 [wrapper] ==== wrapper stdout END ====
[2025-04-18 22:05:46] 2025-04-18 13:05:46,453 [wrapper] ==== wrapper stderr END ====
[2025-04-18 22:05:46]  *** Error codes and diagnostics ***
[2025-04-18 22:05:46]     "exeErrorCode": 0,
[2025-04-18 22:05:46]     "exeErrorDiag": "",
[2025-04-18 22:05:46]     "pilotErrorCode": 0,
[2025-04-18 22:05:46]     "pilotErrorDiag": "",
[2025-04-18 22:05:46]  *** Listing of results directory ***
[2025-04-18 22:05:46] total 409312
[2025-04-18 22:05:46] -rw-r--r--. 1 boinc boinc    495897 Apr 18 14:04 pilot3.tar.gz
[2025-04-18 22:05:46] -rw-r--r--. 1 boinc boinc      5111 Apr 18 14:08 queuedata.json
[2025-04-18 22:05:46] -rwx------. 1 boinc boinc     37140 Apr 18 14:09 runpilot2-wrapper.sh
[2025-04-18 22:05:46] -rw-r--r--. 1 boinc boinc       100 Apr 18 20:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-18 22:05:46] -rwxr-xr-x. 1 boinc boinc      7986 Apr 18 20:14 run_atlas
[2025-04-18 22:05:46] -rw-r--r--. 1 boinc boinc       105 Apr 18 20:14 job.xml
[2025-04-18 22:05:46] -rw-r--r--. 1 boinc boinc      9362 Apr 18 20:14 init_data.xml
[2025-04-18 22:05:46] -rw-r--r--. 2 boinc boinc 225806802 Apr 18 20:14 EVNT.44075481._002512.pool.root.1
[2025-04-18 22:05:46] -rw-r--r--. 2 boinc boinc     17569 Apr 18 20:14 start_atlas.sh
[2025-04-18 22:05:46] drwxrwx--x. 2 boinc boinc        68 Apr 18 20:14 shared
[2025-04-18 22:05:46] -rw-r--r--. 2 boinc boinc    508887 Apr 18 20:14 input.tar.gz
[2025-04-18 22:05:46] -rw-r--r--. 1 boinc boinc         0 Apr 18 20:14 boinc_lockfile
[2025-04-18 22:05:46] -rw-r--r--. 1 boinc boinc      2578 Apr 18 20:14 pandaJob.out
[2025-04-18 22:05:46] -rw-------. 1 boinc boinc       424 Apr 18 20:14 setup.sh.local
[2025-04-18 22:05:46] -rw-------. 1 boinc boinc    990559 Apr 18 20:14 agis_schedconf.cvmfs.json
[2025-04-18 22:05:46] -rw-------. 1 boinc boinc   1618536 Apr 18 20:14 agis_ddmendpoints.agis.ALL.json
[2025-04-18 22:05:46] drwx------. 4 boinc boinc      4096 Apr 18 20:14 pilot3
[2025-04-18 22:05:46] -rw-------. 1 boinc boinc 187637267 Apr 18 22:03 HITS.44075483._064636.pool.root.1
[2025-04-18 22:05:46] -rw-r--r--. 1 boinc boinc       530 Apr 18 22:03 boinc_task_state.xml
[2025-04-18 22:05:46] -rw-------. 1 boinc boinc      1018 Apr 18 22:03 memory_monitor_summary.json
[2025-04-18 22:05:46] -rw-------. 1 boinc boinc    285155 Apr 18 22:04 log.44075483._064636.job.log.tgz.1
[2025-04-18 22:05:46] -rw-------. 1 boinc boinc        95 Apr 18 22:05 pilot_heartbeat.json
[2025-04-18 22:05:46] -rw-------. 1 boinc boinc      7669 Apr 18 22:05 heartbeat.json
[2025-04-18 22:05:46] -rw-r--r--. 1 boinc boinc      8192 Apr 18 22:05 boinc_mmap_file
[2025-04-18 22:05:46] -rw-r--r--. 1 boinc boinc        27 Apr 18 22:05 wrapper_checkpoint.txt
[2025-04-18 22:05:46] -rw-------. 1 boinc boinc      4870 Apr 18 22:05 pilotlog.txt
[2025-04-18 22:05:46] -rw-------. 1 boinc boinc    634713 Apr 18 22:05 log.44075483._064636.job.log.1
[2025-04-18 22:05:46] -rw-------. 1 boinc boinc       357 Apr 18 22:05 output.list
[2025-04-18 22:05:46] -rw-r--r--. 1 boinc boinc       620 Apr 18 22:05 runtime_log
[2025-04-18 22:05:46] -rw-------. 1 boinc boinc    942080 Apr 18 22:05 result.tar.gz
[2025-04-18 22:05:46] -rw-------. 1 boinc boinc       643 Apr 18 22:05 ScZKDml9sP7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmel4KDmWbVATo.diag
[2025-04-18 22:05:46] -rw-r--r--. 1 boinc boinc     10971 Apr 18 22:05 runtime_log.err
[2025-04-18 22:05:46] -rw-r--r--. 1 boinc boinc     20528 Apr 18 22:05 stderr.txt
[2025-04-18 22:05:46] HITS file was successfully produced:
[2025-04-18 22:05:46] -rw-------. 1 boinc boinc 187637267 Apr 18 22:03 shared/HITS.pool.root.1
[2025-04-18 22:05:46]  *** Contents of shared directory: ***
[2025-04-18 22:05:46] total 405196
[2025-04-18 22:05:46] -rw-r--r--. 2 boinc boinc 225806802 Apr 18 20:14 ATLAS.root_0
[2025-04-18 22:05:46] -rw-r--r--. 2 boinc boinc     17569 Apr 18 20:14 start_atlas.sh
[2025-04-18 22:05:46] -rw-r--r--. 2 boinc boinc    508887 Apr 18 20:14 input.tar.gz
[2025-04-18 22:05:46] -rw-------. 1 boinc boinc 187637267 Apr 18 22:03 HITS.pool.root.1
[2025-04-18 22:05:46] -rw-------. 1 boinc boinc    942080 Apr 18 22:05 result.tar.gz
22:05:48 (599659): run_atlas exited; CPU time 32926.277209
22:05:48 (599659): called boinc_finish(0)

</stderr_txt>
]]>

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