Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:33:28 (2311153): wrapper (7.7.26015): starting
13:33:28 (2311153): wrapper: running run_atlas (--nthreads 12)
[2025-04-18 13:33:29] Arguments: --nthreads 12
[2025-04-18 13:33:29] Threads: 12
[2025-04-18 13:33:29] Checking for CVMFS
[2025-04-18 13:33:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-18 13:33:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-18 13:33:29] Running cvmfs_config stat atlas.cern.ch
[2025-04-18 13:33:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-18 13:33:30] 2.11.5.0 2676 21815 233104 145014 3 100 36610022 45568000 14244 130560 0 174390063 99.682 206684582 24933 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-04-18 13:33:30] CVMFS is ok
[2025-04-18 13:33:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-18 13:33:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-18 13:33:30] Further information can be found at the LHC@home message board.
[2025-04-18 13:33:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-18 13:33:30] Checking for apptainer binary...
[2025-04-18 13:33:30] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-18 13:33:30] Running /usr/bin/apptainer --version
[2025-04-18 13:33:30] apptainer version 1.3.5-1.el9
[2025-04-18 13:33:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-18 13:33:31] WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0087.triumf.lcg
[2025-04-18 13:33:31] apptainer works
[2025-04-18 13:33:31] Set ATHENA_PROC_NUMBER=12
[2025-04-18 13:33:31] Set ATHENA_CORE_NUMBER=12
[2025-04-18 13:33:31] Starting ATLAS job with PandaID=6606131049
[2025-04-18 13:33:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-18 14:40:08]  *** The last 200 lines of the pilot log: ***
[2025-04-18 14:40:08]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-04-18 14:40:08]  is_altstaged=None
[2025-04-18 14:40:08]  is_tar=False
[2025-04-18 14:40:08]  lfn=log.44075483._064317.job.log.tgz.1
[2025-04-18 14:40:08]  mtime=0
[2025-04-18 14:40:08]  protocol_id=None
[2025-04-18 14:40:08]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-18 14:40:08]  replicas=None
[2025-04-18 14:40:08]  scope=mc23_13p6TeV
[2025-04-18 14:40:08]  status=None
[2025-04-18 14:40:08]  status_code=0
[2025-04-18 14:40:08]  storage_token=
[2025-04-18 14:40:08]  surl=/home/boinc/slots/0/PanDA_Pilot-6606131049/log.44075483._064317.job.log.tgz.1
[2025-04-18 14:40:08]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fb/12/log.44075483._064317.job.log.tgz.1
[2025-04-18 14:40:08]  workdir=None
[2025-04-18 14:40:08] ]
[2025-04-18 14:40:08] 2025-04-18 21:39:42,887 | INFO     | transferring file log.44075483._064317.job.log.tgz.1 from /home/boinc/slots/0/PanDA_Pilot-6606131049/log.44075483._064317.job.log.tgz.1 to /home/boinc/slots/0/log.
[2025-04-18 14:40:08] 2025-04-18 21:39:42,887 | INFO     | executing command: /usr/bin/env mv /home/boinc/slots/0/PanDA_Pilot-6606131049/log.44075483._064317.job.log.tgz.1 /home/boinc/slots/0/log.44075483._064317.job.log.t
[2025-04-18 14:40:08] 2025-04-18 21:39:42,899 | INFO     | adding to output.list: log.44075483._064317.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fb/12/log.44075483._064317.job.log.tg
[2025-04-18 14:40:08] 2025-04-18 21:39:42,899 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-18 14:40:08] 2025-04-18 21:39:42,899 | INFO     | summary of transferred files:
[2025-04-18 14:40:08] 2025-04-18 21:39:42,900 | INFO     |  -- lfn=log.44075483._064317.job.log.tgz.1, status_code=0, status=transferred
[2025-04-18 14:40:08] 2025-04-18 21:39:42,900 | INFO     | stage-out finished correctly
[2025-04-18 14:40:08] 2025-04-18 21:39:46,046 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-18 14:40:08] 2025-04-18 21:39:46,096 | INFO     | job 6606131049 has state=finished
[2025-04-18 14:40:08] 2025-04-18 21:39:46,096 | INFO     | preparing for final server update for job 6606131049 in state='finished'
[2025-04-18 14:40:08] 2025-04-18 21:39:46,097 | INFO     | this job has now completed (state=finished)
[2025-04-18 14:40:08] 2025-04-18 21:39:46,097 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-18 14:40:08] 2025-04-18 21:39:46,097 | INFO     | log transfer has been attempted: DONE
[2025-04-18 14:40:08] 2025-04-18 21:39:46,097 | INFO     | job 6606131049 has finished - writing final server update
[2025-04-18 14:40:08] 2025-04-18 21:39:46,097 | INFO     | total number of processed events: 400 (read)
[2025-04-18 14:40:08] 2025-04-18 21:39:46,099 | INFO     | executing command: lscpu
[2025-04-18 14:40:08] 2025-04-18 21:39:46,134 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-18 14:40:08] 2025-04-18 21:39:48,532 | INFO     | CPU arch script returned: x86-64-v4
[2025-04-18 14:40:08] 2025-04-18 21:39:48,532 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6606131049/memory_monitor_summary.json (trf name=prmon)
[2025-04-18 14:40:08] 2025-04-18 21:39:48,533 | INFO     | extracted standard info from prmon json
[2025-04-18 14:40:08] 2025-04-18 21:39:48,533 | INFO     | extracted standard memory fields from prmon json
[2025-04-18 14:40:08] 2025-04-18 21:39:48,533 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-18 14:40:08] 2025-04-18 21:39:48,533 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-18 14:40:08] 2025-04-18 21:39:48,534 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-18 14:40:08] 2025-04-18 21:39:48,535 | INFO     | fitting pss+swap vs Time
[2025-04-18 14:40:08] 2025-04-18 21:39:48,535 | INFO     | sum of square deviations: 54434755.839285694
[2025-04-18 14:40:08] 2025-04-18 21:39:48,535 | INFO     | sum of deviations: 12315101808.464285
[2025-04-18 14:40:08] 2025-04-18 21:39:48,535 | INFO     | mean x: 1745010547.5535715
[2025-04-18 14:40:08] 2025-04-18 21:39:48,535 | INFO     | mean y: 2735733.1785714286
[2025-04-18 14:40:08] 2025-04-18 21:39:48,535 | INFO     | -- intersect: -394781482890.18976
[2025-04-18 14:40:08] 2025-04-18 21:39:48,535 | INFO     | intersect: -394781482890.18976
[2025-04-18 14:40:08] 2025-04-18 21:39:48,535 | INFO     | chi2: 2.152366881101086
[2025-04-18 14:40:08] 2025-04-18 21:39:48,536 | INFO     | -- intersect: -394781482890.18976
[2025-04-18 14:40:08] 2025-04-18 21:39:48,536 | INFO     | current memory leak: 226.24 B/s (using 56 data points, chi2=2.15)
[2025-04-18 14:40:08] 2025-04-18 21:39:48,536 | INFO     | ..............................
[2025-04-18 14:40:08] 2025-04-18 21:39:48,536 | INFO     | . Timing measurements:
[2025-04-18 14:40:08] 2025-04-18 21:39:48,536 | INFO     | . get job = 0 s
[2025-04-18 14:40:08] 2025-04-18 21:39:48,536 | INFO     | . initial setup = 4 s
[2025-04-18 14:40:08] 2025-04-18 21:39:48,536 | INFO     | . payload setup = 27 s
[2025-04-18 14:40:08] 2025-04-18 21:39:48,536 | INFO     | . stage-in = 0 s
[2025-04-18 14:40:08] 2025-04-18 21:39:48,537 | INFO     | . payload execution = 3842 s
[2025-04-18 14:40:08] 2025-04-18 21:39:48,537 | INFO     | . stage-out = 0 s
[2025-04-18 14:40:08] 2025-04-18 21:39:48,537 | INFO     | . log creation = 0 s
[2025-04-18 14:40:08] 2025-04-18 21:39:48,537 | INFO     | ..............................
[2025-04-18 14:40:08] 2025-04-18 21:39:48,590 | INFO     | 
[2025-04-18 14:40:08] 2025-04-18 21:39:48,591 | INFO     | job summary report
[2025-04-18 14:40:08] 2025-04-18 21:39:48,591 | INFO     | --------------------------------------------------
[2025-04-18 14:40:08] 2025-04-18 21:39:48,591 | INFO     | PanDA job id: 6606131049
[2025-04-18 14:40:08] 2025-04-18 21:39:48,591 | INFO     | task id: 44075483
[2025-04-18 14:40:08] 2025-04-18 21:39:48,591 | INFO     | errors: (none)
[2025-04-18 14:40:08] 2025-04-18 21:39:48,591 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-18 14:40:08] 2025-04-18 21:39:48,591 | INFO     | pilot state: finished 
[2025-04-18 14:40:08] 2025-04-18 21:39:48,591 | INFO     | transexitcode: 0
[2025-04-18 14:40:08] 2025-04-18 21:39:48,591 | INFO     | exeerrorcode: 0
[2025-04-18 14:40:08] 2025-04-18 21:39:48,591 | INFO     | exeerrordiag: 
[2025-04-18 14:40:08] 2025-04-18 21:39:48,592 | INFO     | exitcode: 0
[2025-04-18 14:40:08] 2025-04-18 21:39:48,592 | INFO     | exitmsg: OK
[2025-04-18 14:40:08] 2025-04-18 21:39:48,592 | INFO     | cpuconsumptiontime: 25581 s
[2025-04-18 14:40:08] 2025-04-18 21:39:48,592 | INFO     | nevents: 400
[2025-04-18 14:40:08] 2025-04-18 21:39:48,592 | INFO     | neventsw: 0
[2025-04-18 14:40:08] 2025-04-18 21:39:48,592 | INFO     | pid: 2323276
[2025-04-18 14:40:08] 2025-04-18 21:39:48,592 | INFO     | pgrp: 2323276
[2025-04-18 14:40:08] 2025-04-18 21:39:48,592 | INFO     | corecount: 12
[2025-04-18 14:40:08] 2025-04-18 21:39:48,592 | INFO     | event service: False
[2025-04-18 14:40:08] 2025-04-18 21:39:48,592 | INFO     | sizes: {0: 2426770, 11: 2426770, 22: 2426798, 31: 2427032, 33: 2427060, 3873: 2452814, 3874: 2461749, 3877: 2461805, 3879: 2461975}
[2025-04-18 14:40:08] 2025-04-18 21:39:48,592 | INFO     | --------------------------------------------------
[2025-04-18 14:40:08] 2025-04-18 21:39:48,592 | INFO     | 
[2025-04-18 14:40:08] 2025-04-18 21:39:48,593 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-04-18 14:40:08] 2025-04-18 21:39:48,605 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-18 14:40:08] 2025-04-18 21:39:48,605 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-18 14:40:08] 2025-04-18 21:39:48,605 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-18 14:40:08] 2025-04-18 21:39:48,605 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-18 14:40:08] 2025-04-18 21:39:48,605 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-18 14:40:08] 2025-04-18 21:39:48,606 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-18 14:40:08] 2025-04-18 21:39:48,606 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-18 14:40:08] 2025-04-18 21:39:48,606 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-18 14:40:08] 2025-04-18 21:39:48,606 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-18 14:40:08] 2025-04-18 21:39:48,606 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-18 14:40:08] 2025-04-18 21:39:48,606 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-18 14:40:08] 2025-04-18 21:39:48,606 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-18 14:40:08] 2025-04-18 21:39:48,606 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-18 14:40:08] 2025-04-18 21:39:48,606 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-18 14:40:08] 2025-04-18 21:39:48,606 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-18 14:40:08] 2025-04-18 21:39:48,606 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-18 14:40:08] 2025-04-18 21:39:48,606 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-18 14:40:08] 2025-04-18 21:39:48,606 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-18 14:40:08] 2025-04-18 21:39:48,607 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-18 14:40:08] 2025-04-18 21:39:48,607 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-18 14:40:08] 2025-04-18 21:39:48,607 | INFO     | job 6606131049 has completed (purged errors)
[2025-04-18 14:40:08] 2025-04-18 21:39:48,607 | INFO     | overall cleanup function is called
[2025-04-18 14:40:08] 2025-04-18 21:39:48,711 | INFO     | 3936s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-04-18 14:40:08] 2025-04-18 21:39:48,728 | WARNING  | process 2323276 can no longer be monitored (due to stat problems) - aborting
[2025-04-18 14:40:08] 2025-04-18 21:39:48,838 | INFO     | using path: /home/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2025-04-18 14:40:08] 2025-04-18 21:39:48,970 | INFO     | number of running child processes to parent process 2323276: 1
[2025-04-18 14:40:08] 2025-04-18 21:39:48,970 | INFO     | maximum number of monitored processes: 6
[2025-04-18 14:40:08] 2025-04-18 21:39:48,970 | INFO     | aborting job monitoring since job object (job id=6606131049) has expired
[2025-04-18 14:40:08] 2025-04-18 21:39:49,615 | INFO     | --- collectZombieJob: --- 10, [2323276]
[2025-04-18 14:40:08] 2025-04-18 21:39:49,615 | INFO     | zombie collector waiting for pid 2323276
[2025-04-18 14:40:08] 2025-04-18 21:39:49,615 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-18 14:40:08] 2025-04-18 21:39:49,615 | INFO     | collected zombie processes
[2025-04-18 14:40:08] 2025-04-18 21:39:49,615 | INFO     | will attempt to kill all subprocesses of pid=2323276
[2025-04-18 14:40:08] 2025-04-18 21:39:49,746 | INFO     | process IDs to be killed: [2323276] (in reverse order)
[2025-04-18 14:40:08] 2025-04-18 21:39:49,797 | WARNING  | found no corresponding commands to process id(s)
[2025-04-18 14:40:08] 2025-04-18 21:39:49,798 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-18 14:40:08] 2025-04-18 21:39:49,803 | INFO     | did not find any defunct processes belonging to 2323276
[2025-04-18 14:40:08] 2025-04-18 21:39:49,808 | INFO     | did not find any defunct processes belonging to 2323276
[2025-04-18 14:40:08] 2025-04-18 21:39:49,808 | INFO     | ready for new job
[2025-04-18 14:40:08] 2025-04-18 21:39:49,808 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-18 14:40:08] 2025-04-18 21:39:49,810 | INFO     | **************************************
[2025-04-18 14:40:08] 2025-04-18 21:39:49,810 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-18 14:40:08] 2025-04-18 21:39:49,810 | INFO     | **************************************
[2025-04-18 14:40:08] 2025-04-18 21:39:49,810 | INFO     | 
[2025-04-18 14:40:08] 2025-04-18 21:39:49,811 | INFO     | architecture information:
[2025-04-18 14:40:08] 2025-04-18 21:39:49,812 | INFO     | executing command: cat /etc/os-release
[2025-04-18 14:40:08] 2025-04-18 21:39:49,820 | INFO     | cat /etc/os-release:
[2025-04-18 14:40:08] NAME="CentOS Linux"
[2025-04-18 14:40:08] VERSION="7 (Core)"
[2025-04-18 14:40:08] ID="centos"
[2025-04-18 14:40:08] ID_LIKE="rhel fedora"
[2025-04-18 14:40:08] VERSION_ID="7"
[2025-04-18 14:40:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-18 14:40:08] ANSI_COLOR="0;31"
[2025-04-18 14:40:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-18 14:40:08] HOME_URL="https://www.centos.org/"
[2025-04-18 14:40:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-18 14:40:08] 
[2025-04-18 14:40:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-18 14:40:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-18 14:40:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-18 14:40:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-18 14:40:08] 
[2025-04-18 14:40:08] 2025-04-18 21:39:49,820 | INFO     | **************************************
[2025-04-18 14:40:08] 2025-04-18 21:39:50,323 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-04-18 14:40:08] 2025-04-18 21:39:50,334 | INFO     | sufficient remaining disk space (2124924583936 B)
[2025-04-18 14:40:08] 2025-04-18 21:39:50,334 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-18 14:40:08] 2025-04-18 21:39:50,334 | INFO     | current server update state: UPDATING_FINAL
[2025-04-18 14:40:08] 2025-04-18 21:39:50,334 | INFO     | update_server=False
[2025-04-18 14:40:08] 2025-04-18 21:39:50,334 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-18 14:40:08] 2025-04-18 21:39:50,334 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-18 14:40:08] 2025-04-18 21:39:50,335 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-18 14:40:08] 2025-04-18 21:39:50,335 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-18 14:40:08] 2025-04-18 21:39:50,335 | INFO     | found 0 job(s) in 20 queues
[2025-04-18 14:40:08] 2025-04-18 21:39:50,335 | INFO     | aborting loop
[2025-04-18 14:40:08] 2025-04-18 21:39:50,335 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-18 14:40:08] 2025-04-18 21:39:50,336 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-18 14:40:08] 2025-04-18 21:39:50,688 | INFO     | all data control threads have been joined
[2025-04-18 14:40:08] 2025-04-18 21:39:50,962 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-18 14:40:08] 2025-04-18 21:39:50,979 | INFO     | all payload control threads have been joined
[2025-04-18 14:40:08] 2025-04-18 21:39:51,337 | INFO     | [job] queue monitor thread has finished
[2025-04-18 14:40:08] 2025-04-18 21:39:51,338 | INFO     | [job] retrieve thread has finished
[2025-04-18 14:40:08] 2025-04-18 21:39:51,340 | INFO     | [job] job monitor thread has finished
[2025-04-18 14:40:08] 2025-04-18 21:39:51,400 | INFO     | [payload] validate_post thread has finished
[2025-04-18 14:40:08] 2025-04-18 21:39:51,402 | INFO     | [data] copytool_in thread has finished
[2025-04-18 14:40:08] 2025-04-18 21:39:51,414 | INFO     | [payload] validate_pre thread has finished
[2025-04-18 14:40:08] 2025-04-18 21:39:51,422 | INFO     | [job] create_data_payload thread has finished
[2025-04-18 14:40:08] 2025-04-18 21:39:51,679 | INFO     | all job control threads have been joined
[2025-04-18 14:40:08] 2025-04-18 21:39:51,690 | INFO     | [data] control thread has finished
[2025-04-18 14:40:08] 2025-04-18 21:39:51,973 | INFO     | [payload] execute_payloads thread has finished
[2025-04-18 14:40:08] 2025-04-18 21:39:51,984 | INFO     | [payload] control thread has finished
[2025-04-18 14:40:08] 2025-04-18 21:39:52,004 | INFO     | [payload] failed_post thread has finished
[2025-04-18 14:40:08] 2025-04-18 21:39:52,101 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-18 14:40:08] 2025-04-18 21:39:52,684 | INFO     | [job] control thread has finished
[2025-04-18 14:40:08] 2025-04-18 21:39:52,775 | INFO     | [job] validate thread has finished
[2025-04-18 14:40:08] 2025-04-18 21:39:52,966 | INFO     | [data] copytool_out thread has finished
[2025-04-18 14:40:08] 2025-04-18 21:39:56,106 | INFO     | [data] queue_monitor thread has finished
[2025-04-18 14:40:08] 2025-04-18 21:40:00,846 | INFO     | job.realtimelogging is not enabled
[2025-04-18 14:40:08] 2025-04-18 21:40:01,852 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-18 14:40:08] 2025-04-18 21:40:02,889 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140280159811392)>', '<ExcThread(monitor, started 140279537465088)>']
[2025-04-18 14:40:08] 2025-04-18 21:40:03,394 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-18 14:40:08] 2025-04-18 21:40:03,394 | INFO     | [monitor] control thread has ended
[2025-04-18 14:40:08] 2025-04-18 21:40:07,915 | INFO     | all workflow threads have been joined
[2025-04-18 14:40:08] 2025-04-18 21:40:07,915 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-18 14:40:08] 2025-04-18 21:40:07,915 | INFO     | traces error code: 0
[2025-04-18 14:40:08] 2025-04-18 21:40:07,915 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-18 14:40:08] 2025-04-18 21:40:08,020 [wrapper] ==== pilot stdout END ====
[2025-04-18 14:40:08] 2025-04-18 21:40:08,022 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-18 14:40:08] 2025-04-18 21:40:08,024 [wrapper] pilotpid: 2314748
[2025-04-18 14:40:08] 2025-04-18 21:40:08,026 [wrapper] Pilot exit status: 0
[2025-04-18 14:40:08] 2025-04-18 21:40:08,033 [wrapper] pandaids: 6606131049
[2025-04-18 14:40:08] 2025-04-18 21:40:08,069 [wrapper] cleanup supervisor_pilot 2413190 2314749
[2025-04-18 14:40:08] 2025-04-18 21:40:08,071 [wrapper] Test setup, not cleaning
[2025-04-18 14:40:08] 2025-04-18 21:40:08,073 [wrapper] apfmon messages muted
[2025-04-18 14:40:08] 2025-04-18 21:40:08,074 [wrapper] ==== wrapper stdout END ====
[2025-04-18 14:40:08] 2025-04-18 21:40:08,076 [wrapper] ==== wrapper stderr END ====
[2025-04-18 14:40:08]  *** Error codes and diagnostics ***
[2025-04-18 14:40:08]     "exeErrorCode": 0,
[2025-04-18 14:40:08]     "exeErrorDiag": "",
[2025-04-18 14:40:08]     "pilotErrorCode": 0,
[2025-04-18 14:40:08]     "pilotErrorDiag": "",
[2025-04-18 14:40:08]  *** Listing of results directory ***
[2025-04-18 14:40:08] total 409972
[2025-04-18 14:40:08] -rw-r--r--. 1 boinc boinc    503527 Apr  3 00:42 pilot3.tar.gz
[2025-04-18 14:40:08] -rw-r--r--. 1 boinc boinc      5111 Apr 17 21:42 queuedata.json
[2025-04-18 14:40:08] -rwx------. 1 boinc boinc     37140 Apr 17 21:45 runpilot2-wrapper.sh
[2025-04-18 14:40:08] -rw-r--r--. 1 boinc boinc       100 Apr 18 13:33 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-18 14:40:08] -rwxr-xr-x. 1 boinc boinc      7986 Apr 18 13:33 run_atlas
[2025-04-18 14:40:08] -rw-r--r--. 1 boinc boinc       105 Apr 18 13:33 job.xml
[2025-04-18 14:40:08] -rw-r--r--. 1 boinc boinc      6602 Apr 18 13:33 init_data.xml
[2025-04-18 14:40:08] -rw-r--r--. 2 boinc boinc 222266950 Apr 18 13:33 EVNT.44075481._002500.pool.root.1
[2025-04-18 14:40:08] -rw-r--r--. 2 boinc boinc     17569 Apr 18 13:33 start_atlas.sh
[2025-04-18 14:40:08] drwxrwx--x. 2 boinc boinc      4096 Apr 18 13:33 shared
[2025-04-18 14:40:08] -rw-r--r--. 2 boinc boinc    517106 Apr 18 13:33 input.tar.gz
[2025-04-18 14:40:08] -rw-r--r--. 1 boinc boinc         0 Apr 18 13:33 boinc_lockfile
[2025-04-18 14:40:08] -rw-r--r--. 1 boinc boinc      2578 Apr 18 13:33 pandaJob.out
[2025-04-18 14:40:08] -rw-------. 1 boinc boinc       424 Apr 18 13:33 setup.sh.local
[2025-04-18 14:40:08] -rw-------. 1 boinc boinc    991292 Apr 18 13:34 agis_schedconf.cvmfs.json
[2025-04-18 14:40:08] -rw-------. 1 boinc boinc   1618536 Apr 18 13:34 agis_ddmendpoints.agis.ALL.json
[2025-04-18 14:40:08] drwx------. 4 boinc boinc      4096 Apr 18 13:34 pilot3
[2025-04-18 14:40:08] -rw-------. 1 boinc boinc 192165234 Apr 18 14:39 HITS.44075483._064317.pool.root.1
[2025-04-18 14:40:08] -rw-r--r--. 1 boinc boinc       530 Apr 18 14:39 boinc_task_state.xml
[2025-04-18 14:40:08] -rw-------. 1 boinc boinc        95 Apr 18 14:39 pilot_heartbeat.json
[2025-04-18 14:40:08] -rw-------. 1 boinc boinc      1028 Apr 18 14:39 memory_monitor_summary.json
[2025-04-18 14:40:08] -rw-------. 1 boinc boinc    354599 Apr 18 14:39 log.44075483._064317.job.log.tgz.1
[2025-04-18 14:40:08] -rw-------. 1 boinc boinc      7715 Apr 18 14:39 heartbeat.json
[2025-04-18 14:40:08] -rw-r--r--. 1 boinc boinc        27 Apr 18 14:40 wrapper_checkpoint.txt
[2025-04-18 14:40:08] -rw-r--r--. 1 boinc boinc      8192 Apr 18 14:40 boinc_mmap_file
[2025-04-18 14:40:08] -rw-------. 1 boinc boinc      4547 Apr 18 14:40 pilotlog.txt
[2025-04-18 14:40:08] -rw-------. 1 boinc boinc    394161 Apr 18 14:40 log.44075483._064317.job.log.1
[2025-04-18 14:40:08] -rw-------. 1 boinc boinc       357 Apr 18 14:40 output.list
[2025-04-18 14:40:08] -rw-r--r--. 1 boinc boinc       620 Apr 18 14:40 runtime_log
[2025-04-18 14:40:08] -rw-------. 1 boinc boinc    768000 Apr 18 14:40 result.tar.gz
[2025-04-18 14:40:08] -rw-------. 1 boinc boinc       658 Apr 18 14:40 si9KDmhmsP7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmoQeLDmJmVqtn.diag
[2025-04-18 14:40:08] -rw-r--r--. 1 boinc boinc     11144 Apr 18 14:40 runtime_log.err
[2025-04-18 14:40:08] -rw-r--r--. 1 boinc boinc     21555 Apr 18 14:40 stderr.txt
[2025-04-18 14:40:08] HITS file was successfully produced:
[2025-04-18 14:40:08] -rw-------. 1 boinc boinc 192165234 Apr 18 14:39 shared/HITS.pool.root.1
[2025-04-18 14:40:08]  *** Contents of shared directory: ***
[2025-04-18 14:40:08] total 406008
[2025-04-18 14:40:08] -rw-r--r--. 2 boinc boinc 222266950 Apr 18 13:33 ATLAS.root_0
[2025-04-18 14:40:08] -rw-r--r--. 2 boinc boinc     17569 Apr 18 13:33 start_atlas.sh
[2025-04-18 14:40:08] -rw-r--r--. 2 boinc boinc    517106 Apr 18 13:33 input.tar.gz
[2025-04-18 14:40:08] -rw-------. 1 boinc boinc 192165234 Apr 18 14:39 HITS.pool.root.1
[2025-04-18 14:40:08] -rw-------. 1 boinc boinc    768000 Apr 18 14:40 result.tar.gz
14:40:09 (2311153): run_atlas exited; CPU time 25621.244291
14:40:09 (2311153): called boinc_finish(0)

</stderr_txt>
]]>

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