Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:15:31 (3640507): wrapper (7.7.26015): starting
04:15:31 (3640507): wrapper: running run_atlas (--nthreads 4)
[2025-04-19 04:15:31] Arguments: --nthreads 4
[2025-04-19 04:15:31] Threads: 4
[2025-04-19 04:15:31] Checking for CVMFS
[2025-04-19 04:15:31] No cvmfs_config command found, will try listing directly
[2025-04-19 04:15:31] CVMFS is ok
[2025-04-19 04:15:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-19 04:15:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-19 04:15:31] Further information can be found at the LHC@home message board.
[2025-04-19 04:15:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-19 04:15:31] Checking for apptainer binary...
[2025-04-19 04:15:31] which: no apptainer in ((null))
[2025-04-19 04:15:31] apptainer is not installed, using version from CVMFS
[2025-04-19 04:15:31] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-19 04:15:32] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot40/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut04.grid.cesnet.cz
[2025-04-19 04:15:32] apptainer works
[2025-04-19 04:15:32] Set ATHENA_PROC_NUMBER=4
[2025-04-19 04:15:32] Set ATHENA_CORE_NUMBER=4
[2025-04-19 04:15:32] Starting ATLAS job with PandaID=6606058473
[2025-04-19 04:15:32] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot40/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-19 06:59:13]  *** The last 200 lines of the pilot log: ***
[2025-04-19 06:59:13] 2025-04-19 04:58:52,815 | INFO     | chi2: 3.4655479526886905
[2025-04-19 06:59:13] 2025-04-19 04:58:52,815 | INFO     | current chi2=3.4655479526886905 (change=0.0957379421580724 %)
[2025-04-19 06:59:13] 2025-04-19 04:58:52,816 | INFO     | right removable region: 154
[2025-04-19 06:59:13] 2025-04-19 04:58:52,816 | INFO     | sum of square deviations: 1154663510.0
[2025-04-19 06:59:13] 2025-04-19 04:58:52,817 | INFO     | sum of deviations: 31524385322.000004
[2025-04-19 06:59:13] 2025-04-19 04:58:52,817 | INFO     | mean x: 1745033969.0
[2025-04-19 06:59:13] 2025-04-19 04:58:52,817 | INFO     | mean y: 2286988.4
[2025-04-19 06:59:13] 2025-04-19 04:58:52,817 | INFO     | -- intersect: -47640271005.60382
[2025-04-19 06:59:13] 2025-04-19 04:58:52,817 | INFO     | intersect: -47640271005.60382
[2025-04-19 06:59:13] 2025-04-19 04:58:52,818 | INFO     | chi2: 1.469673920254048
[2025-04-19 06:59:13] 2025-04-19 04:58:52,818 | INFO     | current chi2=1.469673920254048 (change=57.63247530459847 %)
[2025-04-19 06:59:13] 2025-04-19 04:58:52,818 | INFO     | sum of square deviations: 1046484737.5
[2025-04-19 06:59:13] 2025-04-19 04:58:52,819 | INFO     | sum of deviations: 3530142956.0
[2025-04-19 06:59:13] 2025-04-19 04:58:52,819 | INFO     | mean x: 1745034121.5
[2025-04-19 06:59:13] 2025-04-19 04:58:52,819 | INFO     | mean y: 2326514.986666667
[2025-04-19 06:59:13] 2025-04-19 04:58:52,819 | INFO     | -- intersect: -5884257102.763299
[2025-04-19 06:59:13] 2025-04-19 04:58:52,820 | INFO     | sufficient remaining disk space (688569450496 B)
[2025-04-19 06:59:13] 2025-04-19 04:58:52,820 | INFO     | intersect: -5884257102.763299
[2025-04-19 06:59:13] 2025-04-19 04:58:52,821 | INFO     | chi2: 0.08388820486855791
[2025-04-19 06:59:13] 2025-04-19 04:58:52,821 | INFO     | current chi2=0.08388820486855791 (change=94.29205324307198 %)
[2025-04-19 06:59:13] 2025-04-19 04:58:52,821 | INFO     | sum of square deviations: 945282840.0
[2025-04-19 06:59:13] 2025-04-19 04:58:52,822 | INFO     | sum of deviations: -1105228012.0
[2025-04-19 06:59:13] 2025-04-19 04:58:52,822 | INFO     | mean x: 1745034274.0
[2025-04-19 06:59:13] 2025-04-19 04:58:52,822 | INFO     | mean y: 2333363.668965517
[2025-04-19 06:59:13] 2025-04-19 04:58:52,822 | INFO     | -- intersect: 2042633557.3389187
[2025-04-19 06:59:13] 2025-04-19 04:58:52,822 | INFO     | intersect: 2042633557.3389187
[2025-04-19 06:59:13] 2025-04-19 04:58:52,822 | INFO     | chi2: 0.000939846806461857
[2025-04-19 06:59:13] 2025-04-19 04:58:52,822 | INFO     | current chi2=0.000939846806461857 (change=98.87964367823285 %)
[2025-04-19 06:59:13] 2025-04-19 04:58:52,823 | INFO     | sum of square deviations: 850825255.0
[2025-04-19 06:59:13] 2025-04-19 04:58:52,823 | INFO     | sum of deviations: -1041373456.0
[2025-04-19 06:59:13] 2025-04-19 04:58:52,824 | INFO     | mean x: 1745034426.5
[2025-04-19 06:59:13] 2025-04-19 04:58:52,824 | INFO     | mean y: 2333259.057142857
[2025-04-19 06:59:13] 2025-04-19 04:58:52,824 | INFO     | -- intersect: 2138180215.743076
[2025-04-19 06:59:13] 2025-04-19 04:58:52,824 | INFO     | intersect: 2138180215.743076
[2025-04-19 06:59:13] 2025-04-19 04:58:52,824 | INFO     | chi2: 0.0009302140977816818
[2025-04-19 06:59:13] 2025-04-19 04:58:52,824 | INFO     | current chi2=0.0009302140977816818 (change=1.0249232762133254 %)
[2025-04-19 06:59:13] 2025-04-19 04:58:52,824 | INFO     | left removable region: 40
[2025-04-19 06:59:13] 2025-04-19 04:58:52,825 | INFO     | sum of square deviations: 459366752.5
[2025-04-19 06:59:13] 2025-04-19 04:58:52,825 | INFO     | sum of deviations: -529431840.4999998
[2025-04-19 06:59:13] 2025-04-19 04:58:52,825 | INFO     | mean x: 1745034853.5
[2025-04-19 06:59:13] 2025-04-19 04:58:52,825 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-04-19 06:59:13] 2025-04-19 04:58:52,826 | INFO     | mean y: 2331810.0789473685
[2025-04-19 06:59:13] 2025-04-19 04:58:52,826 | INFO     | -- intersect: 2013528765.8820398
[2025-04-19 06:59:13] 2025-04-19 04:58:52,826 | INFO     | intersect: 2013528765.8820398
[2025-04-19 06:59:13] 2025-04-19 04:58:52,826 | INFO     | chi2: 0.0007443348350736068
[2025-04-19 06:59:13] 2025-04-19 04:58:52,826 | INFO     | -- intersect: 2013528765.8820398
[2025-04-19 06:59:13] 2025-04-19 04:58:52,827 | INFO     | current memory leak: -1.15 B/s (using 114 data points, chi2=0.00)
[2025-04-19 06:59:13] 2025-04-19 04:58:52,827 | INFO     | ..............................
[2025-04-19 06:59:13] 2025-04-19 04:58:52,827 | INFO     | . Timing measurements:
[2025-04-19 06:59:13] 2025-04-19 04:58:52,828 | INFO     | . get job = 0 s
[2025-04-19 06:59:13] 2025-04-19 04:58:52,828 | INFO     | . initial setup = 1 s
[2025-04-19 06:59:13] 2025-04-19 04:58:52,828 | INFO     | . payload setup = 5 s
[2025-04-19 06:59:13] 2025-04-19 04:58:52,828 | INFO     | . stage-in = 0 s
[2025-04-19 06:59:13] 2025-04-19 04:58:52,828 | INFO     | . payload execution = 9760 s
[2025-04-19 06:59:13] 2025-04-19 04:58:52,828 | INFO     | . stage-out = 0 s
[2025-04-19 06:59:13] 2025-04-19 04:58:52,828 | INFO     | . log creation = 0 s
[2025-04-19 06:59:13] 2025-04-19 04:58:52,828 | INFO     | ..............................
[2025-04-19 06:59:13] 2025-04-19 04:58:52,929 | INFO     | size of work directory /scratch/boinc/var/slot40/slots/0/PanDA_Pilot-6606058473: 2526912 B (within 2537553920 B limit)
[2025-04-19 06:59:13] 2025-04-19 04:58:52,929 | INFO     | pfn file=/scratch/boinc/var/slot40/slots/0/PanDA_Pilot-6606058473/HITS.44075483._063660.pool.root.1 does not exist (skip from workdir size calculation)
[2025-04-19 06:59:13] 2025-04-19 04:58:52,929 | INFO     | total size of present files: 0 B (workdir size: 2526912 B)
[2025-04-19 06:59:13] 2025-04-19 04:58:52,929 | INFO     | output file size check: skipping output file /scratch/boinc/var/slot40/slots/0/PanDA_Pilot-6606058473/HITS.44075483._063660.pool.root.1 since it does not exist
[2025-04-19 06:59:13] 2025-04-19 04:58:53,037 | INFO     | 
[2025-04-19 06:59:13] 2025-04-19 04:58:53,037 | INFO     | job summary report
[2025-04-19 06:59:13] 2025-04-19 04:58:53,037 | INFO     | --------------------------------------------------
[2025-04-19 06:59:13] 2025-04-19 04:58:53,037 | INFO     | PanDA job id: 6606058473
[2025-04-19 06:59:13] 2025-04-19 04:58:53,037 | INFO     | task id: 44075483
[2025-04-19 06:59:13] 2025-04-19 04:58:53,037 | INFO     | errors: (none)
[2025-04-19 06:59:13] 2025-04-19 04:58:53,037 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-19 06:59:13] 2025-04-19 04:58:53,037 | INFO     | pilot state: finished 
[2025-04-19 06:59:13] 2025-04-19 04:58:53,037 | INFO     | transexitcode: 0
[2025-04-19 06:59:13] 2025-04-19 04:58:53,037 | INFO     | exeerrorcode: 0
[2025-04-19 06:59:13] 2025-04-19 04:58:53,038 | INFO     | exeerrordiag: 
[2025-04-19 06:59:13] 2025-04-19 04:58:53,038 | INFO     | exitcode: 0
[2025-04-19 06:59:13] 2025-04-19 04:58:53,038 | INFO     | exitmsg: OK
[2025-04-19 06:59:13] 2025-04-19 04:58:53,038 | INFO     | cpuconsumptiontime: 35800 s
[2025-04-19 06:59:13] 2025-04-19 04:58:53,038 | INFO     | nevents: 400
[2025-04-19 06:59:13] 2025-04-19 04:58:53,038 | INFO     | neventsw: 0
[2025-04-19 06:59:13] 2025-04-19 04:58:53,038 | INFO     | pid: 3651231
[2025-04-19 06:59:13] 2025-04-19 04:58:53,038 | INFO     | pgrp: 3651231
[2025-04-19 06:59:13] 2025-04-19 04:58:53,038 | INFO     | corecount: 4
[2025-04-19 06:59:13] 2025-04-19 04:58:53,038 | INFO     | event service: False
[2025-04-19 06:59:13] 2025-04-19 04:58:53,038 | INFO     | sizes: {0: 2426784, 4: 2426990, 11: 2427018, 9770: 2455433, 9772: 2464452, 9776: 2464566}
[2025-04-19 06:59:13] 2025-04-19 04:58:53,038 | INFO     | --------------------------------------------------
[2025-04-19 06:59:13] 2025-04-19 04:58:53,038 | INFO     | 
[2025-04-19 06:59:13] 2025-04-19 04:58:53,038 | INFO     | executing command: ls -lF /scratch/boinc/var/slot40/slots/0
[2025-04-19 06:59:13] 2025-04-19 04:58:53,054 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-19 06:59:13] 2025-04-19 04:58:53,054 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-19 06:59:13] 2025-04-19 04:58:53,054 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-19 06:59:13] 2025-04-19 04:58:53,054 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-19 06:59:13] 2025-04-19 04:58:53,054 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-19 06:59:13] 2025-04-19 04:58:53,055 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-19 06:59:13] 2025-04-19 04:58:53,055 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-19 06:59:13] 2025-04-19 04:58:53,055 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-19 06:59:13] 2025-04-19 04:58:53,055 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-19 06:59:13] 2025-04-19 04:58:53,055 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-19 06:59:13] 2025-04-19 04:58:53,055 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-19 06:59:13] 2025-04-19 04:58:53,055 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-19 06:59:13] 2025-04-19 04:58:53,055 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-19 06:59:13] 2025-04-19 04:58:53,055 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-19 06:59:13] 2025-04-19 04:58:53,055 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-19 06:59:13] 2025-04-19 04:58:53,055 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-19 06:59:13] 2025-04-19 04:58:53,055 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-19 06:59:13] 2025-04-19 04:58:53,056 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-19 06:59:13] 2025-04-19 04:58:53,056 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-19 06:59:13] 2025-04-19 04:58:53,056 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-19 06:59:13] 2025-04-19 04:58:53,056 | INFO     | job 6606058473 has completed (purged errors)
[2025-04-19 06:59:13] 2025-04-19 04:58:53,056 | INFO     | overall cleanup function is called
[2025-04-19 06:59:13] 2025-04-19 04:58:53,191 | INFO     | number of running child processes to parent process 3651231: 1
[2025-04-19 06:59:13] 2025-04-19 04:58:53,191 | INFO     | maximum number of monitored processes: 6
[2025-04-19 06:59:13] 2025-04-19 04:58:53,191 | INFO     | aborting job monitoring since job object (job id=6606058473) has expired
[2025-04-19 06:59:13] 2025-04-19 04:58:54,064 | INFO     | --- collectZombieJob: --- 10, [3651231]
[2025-04-19 06:59:13] 2025-04-19 04:58:54,064 | INFO     | zombie collector waiting for pid 3651231
[2025-04-19 06:59:13] 2025-04-19 04:58:54,064 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-19 06:59:13] 2025-04-19 04:58:54,064 | INFO     | collected zombie processes
[2025-04-19 06:59:13] 2025-04-19 04:58:54,064 | INFO     | will attempt to kill all subprocesses of pid=3651231
[2025-04-19 06:59:13] 2025-04-19 04:58:54,349 | INFO     | process IDs to be killed: [3651231] (in reverse order)
[2025-04-19 06:59:13] 2025-04-19 04:58:54,451 | WARNING  | found no corresponding commands to process id(s)
[2025-04-19 06:59:13] 2025-04-19 04:58:54,451 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-19 06:59:13] 2025-04-19 04:58:54,460 | INFO     | did not find any defunct processes belonging to 3651231
[2025-04-19 06:59:13] 2025-04-19 04:58:54,468 | INFO     | did not find any defunct processes belonging to 3651231
[2025-04-19 06:59:13] 2025-04-19 04:58:54,468 | INFO     | ready for new job
[2025-04-19 06:59:13] 2025-04-19 04:58:54,468 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-19 06:59:13] 2025-04-19 04:58:54,470 | INFO     | **************************************
[2025-04-19 06:59:13] 2025-04-19 04:58:54,471 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-19 06:59:13] 2025-04-19 04:58:54,471 | INFO     | **************************************
[2025-04-19 06:59:13] 2025-04-19 04:58:54,471 | INFO     | 
[2025-04-19 06:59:13] 2025-04-19 04:58:54,474 | INFO     | architecture information:
[2025-04-19 06:59:13] 2025-04-19 04:58:54,475 | INFO     | executing command: cat /etc/os-release
[2025-04-19 06:59:13] 2025-04-19 04:58:54,490 | INFO     | cat /etc/os-release:
[2025-04-19 06:59:13] NAME="CentOS Linux"
[2025-04-19 06:59:13] VERSION="7 (Core)"
[2025-04-19 06:59:13] ID="centos"
[2025-04-19 06:59:13] ID_LIKE="rhel fedora"
[2025-04-19 06:59:13] VERSION_ID="7"
[2025-04-19 06:59:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-19 06:59:13] ANSI_COLOR="0;31"
[2025-04-19 06:59:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-19 06:59:13] HOME_URL="https://www.centos.org/"
[2025-04-19 06:59:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-19 06:59:13] 
[2025-04-19 06:59:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-19 06:59:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-19 06:59:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-19 06:59:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-19 06:59:13] 
[2025-04-19 06:59:13] 2025-04-19 04:58:54,490 | INFO     | **************************************
[2025-04-19 06:59:13] 2025-04-19 04:58:54,968 | INFO     | PID=3644226 has CPU usage=14.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-04-19 06:59:13] 2025-04-19 04:58:54,968 | INFO     | .. there are 12 such processes running
[2025-04-19 06:59:13] 2025-04-19 04:58:54,993 | INFO     | executing command: df -mP /scratch/boinc/var/slot40/slots/0
[2025-04-19 06:59:13] 2025-04-19 04:58:55,010 | INFO     | sufficient remaining disk space (688573644800 B)
[2025-04-19 06:59:13] 2025-04-19 04:58:55,010 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-19 06:59:13] 2025-04-19 04:58:55,011 | INFO     | current server update state: UPDATING_FINAL
[2025-04-19 06:59:13] 2025-04-19 04:58:55,011 | INFO     | update_server=False
[2025-04-19 06:59:13] 2025-04-19 04:58:55,011 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-19 06:59:13] 2025-04-19 04:58:55,011 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-19 06:59:13] 2025-04-19 04:58:55,011 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-19 06:59:13] 2025-04-19 04:58:55,011 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-19 06:59:13] 2025-04-19 04:58:55,012 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-19 06:59:13] 2025-04-19 04:58:55,012 | INFO     | aborting loop
[2025-04-19 06:59:13] 2025-04-19 04:58:55,013 | INFO     | found 0 job(s) in 20 queues
[2025-04-19 06:59:13] 2025-04-19 04:58:55,013 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-19 06:59:13] 2025-04-19 04:58:55,013 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-19 06:59:13] 2025-04-19 04:58:55,255 | INFO     | all data control threads have been joined
[2025-04-19 06:59:13] 2025-04-19 04:58:56,015 | INFO     | [job] job monitor thread has finished
[2025-04-19 06:59:13] 2025-04-19 04:58:56,016 | INFO     | [job] retrieve thread has finished
[2025-04-19 06:59:13] 2025-04-19 04:58:56,099 | INFO     | [payload] failed_post thread has finished
[2025-04-19 06:59:13] 2025-04-19 04:58:56,174 | INFO     | all job control threads have been joined
[2025-04-19 06:59:13] 2025-04-19 04:58:56,191 | INFO     | [payload] validate_pre thread has finished
[2025-04-19 06:59:13] 2025-04-19 04:58:56,260 | INFO     | [data] control thread has finished
[2025-04-19 06:59:13] 2025-04-19 04:58:56,349 | INFO     | all payload control threads have been joined
[2025-04-19 06:59:13] 2025-04-19 04:58:56,512 | INFO     | [payload] execute_payloads thread has finished
[2025-04-19 06:59:13] 2025-04-19 04:58:57,018 | INFO     | [data] copytool_out thread has finished
[2025-04-19 06:59:13] 2025-04-19 04:58:57,105 | INFO     | [job] validate thread has finished
[2025-04-19 06:59:13] 2025-04-19 04:58:57,178 | INFO     | [job] control thread has finished
[2025-04-19 06:59:13] 2025-04-19 04:58:57,249 | INFO     | [payload] validate_post thread has finished
[2025-04-19 06:59:13] 2025-04-19 04:58:57,288 | INFO     | [data] copytool_in thread has finished
[2025-04-19 06:59:13] 2025-04-19 04:58:57,354 | INFO     | [payload] control thread has finished
[2025-04-19 06:59:13] 2025-04-19 04:58:57,405 | INFO     | [job] create_data_payload thread has finished
[2025-04-19 06:59:13] 2025-04-19 04:58:57,935 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-19 06:59:13] 2025-04-19 04:58:58,940 | INFO     | [job] queue monitor thread has finished
[2025-04-19 06:59:13] 2025-04-19 04:58:59,018 | INFO     | [data] queue_monitor thread has finished
[2025-04-19 06:59:13] 2025-04-19 04:59:05,376 | INFO     | job.realtimelogging is not enabled
[2025-04-19 06:59:13] 2025-04-19 04:59:06,380 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-19 06:59:13] 2025-04-19 04:59:08,236 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23025071957824)>', '<ExcThread(monitor, started 23024835200768)>']
[2025-04-19 06:59:13] 2025-04-19 04:59:09,083 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-19 06:59:13] 2025-04-19 04:59:09,083 | INFO     | [monitor] control thread has ended
[2025-04-19 06:59:13] 2025-04-19 04:59:13,261 | INFO     | all workflow threads have been joined
[2025-04-19 06:59:13] 2025-04-19 04:59:13,261 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-19 06:59:13] 2025-04-19 04:59:13,261 | INFO     | traces error code: 0
[2025-04-19 06:59:13] 2025-04-19 04:59:13,262 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-19 06:59:13] 2025-04-19 04:59:13,425 [wrapper] ==== pilot stdout END ====
[2025-04-19 06:59:13] 2025-04-19 04:59:13,428 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-19 06:59:13] 2025-04-19 04:59:13,431 [wrapper] pilotpid: 3644226
[2025-04-19 06:59:13] 2025-04-19 04:59:13,433 [wrapper] Pilot exit status: 0
[2025-04-19 06:59:13] 2025-04-19 04:59:13,444 [wrapper] pandaids: 6606058473
[2025-04-19 06:59:13] 2025-04-19 04:59:13,499 [wrapper] cleanup supervisor_pilot 4053289 3644227
[2025-04-19 06:59:13] 2025-04-19 04:59:13,502 [wrapper] Test setup, not cleaning
[2025-04-19 06:59:13] 2025-04-19 04:59:13,505 [wrapper] apfmon messages muted
[2025-04-19 06:59:13] 2025-04-19 04:59:13,507 [wrapper] ==== wrapper stdout END ====
[2025-04-19 06:59:13] 2025-04-19 04:59:13,510 [wrapper] ==== wrapper stderr END ====
[2025-04-19 06:59:13]  *** Error codes and diagnostics ***
[2025-04-19 06:59:13]     "exeErrorCode": 0,
[2025-04-19 06:59:13]     "exeErrorDiag": "",
[2025-04-19 06:59:13]     "pilotErrorCode": 0,
[2025-04-19 06:59:13]     "pilotErrorDiag": "",
[2025-04-19 06:59:13]  *** Listing of results directory ***
[2025-04-19 06:59:13] total 418620
[2025-04-19 06:59:13] -rw-r--r-- 1 boinc boinc    495897 Apr 18 05:11 pilot3.tar.gz
[2025-04-19 06:59:13] -rw-r--r-- 1 boinc boinc      5111 Apr 18 05:15 queuedata.json
[2025-04-19 06:59:13] -rwx------ 1 boinc boinc     37140 Apr 18 05:17 runpilot2-wrapper.sh
[2025-04-19 06:59:13] -rw-r--r-- 1 boinc boinc       100 Apr 19 04:15 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-19 06:59:13] -rwxr-xr-x 1 boinc boinc      7986 Apr 19 04:15 run_atlas
[2025-04-19 06:59:13] -rw-r--r-- 1 boinc boinc       105 Apr 19 04:15 job.xml
[2025-04-19 06:59:13] -rw-r--r-- 1 boinc boinc      6635 Apr 19 04:15 init_data.xml
[2025-04-19 06:59:13] -rw-r--r-- 2 boinc boinc 222674565 Apr 19 04:15 EVNT.44075481._002475.pool.root.1
[2025-04-19 06:59:13] -rw-r--r-- 2 boinc boinc     17569 Apr 19 04:15 start_atlas.sh
[2025-04-19 06:59:13] drwxrwx--x 2 boinc boinc      4096 Apr 19 04:15 shared
[2025-04-19 06:59:13] -rw-r--r-- 2 boinc boinc    508893 Apr 19 04:15 input.tar.gz
[2025-04-19 06:59:13] -rw-r--r-- 1 boinc boinc         0 Apr 19 04:15 boinc_lockfile
[2025-04-19 06:59:13] -rw-r--r-- 1 boinc boinc      2578 Apr 19 04:15 pandaJob.out
[2025-04-19 06:59:13] -rw------- 1 boinc boinc       424 Apr 19 04:15 setup.sh.local
[2025-04-19 06:59:13] -rw------- 1 boinc boinc    991292 Apr 19 04:15 agis_schedconf.cvmfs.json
[2025-04-19 06:59:13] -rw------- 1 boinc boinc   1618536 Apr 19 04:15 agis_ddmendpoints.agis.ALL.json
[2025-04-19 06:59:13] drwx------ 4 boinc boinc      4096 Apr 19 04:15 pilot3
[2025-04-19 06:59:13] -rw------- 1 boinc boinc 199683028 Apr 19 06:58 HITS.44075483._063660.pool.root.1
[2025-04-19 06:59:13] -rw-r--r-- 1 boinc boinc       529 Apr 19 06:58 boinc_task_state.xml
[2025-04-19 06:59:13] -rw------- 1 boinc boinc        95 Apr 19 06:58 pilot_heartbeat.json
[2025-04-19 06:59:13] -rw------- 1 boinc boinc      1031 Apr 19 06:58 memory_monitor_summary.json
[2025-04-19 06:59:13] -rw------- 1 boinc boinc    288951 Apr 19 06:58 log.44075483._063660.job.log.tgz.1
[2025-04-19 06:59:13] -rw-r--r-- 1 boinc boinc      8192 Apr 19 06:58 boinc_mmap_file
[2025-04-19 06:59:13] -rw-r--r-- 1 boinc boinc        27 Apr 19 06:58 wrapper_checkpoint.txt
[2025-04-19 06:59:13] -rw------- 1 boinc boinc      7718 Apr 19 06:58 heartbeat.json
[2025-04-19 06:59:13] -rw------- 1 boinc boinc      4954 Apr 19 06:59 pilotlog.txt
[2025-04-19 06:59:13] -rw------- 1 boinc boinc    931782 Apr 19 06:59 log.44075483._063660.job.log.1
[2025-04-19 06:59:13] -rw------- 1 boinc boinc       357 Apr 19 06:59 output.list
[2025-04-19 06:59:13] -rw-r--r-- 1 boinc boinc       620 Apr 19 06:59 runtime_log
[2025-04-19 06:59:13] -rw------- 1 boinc boinc   1239040 Apr 19 06:59 result.tar.gz
[2025-04-19 06:59:13] -rw------- 1 boinc boinc       662 Apr 19 06:59 x1TNDmAPrP7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDm8IeLDmK1Bafm.diag
[2025-04-19 06:59:13] -rw-r--r-- 1 boinc boinc     11423 Apr 19 06:59 runtime_log.err
[2025-04-19 06:59:13] -rw-r--r-- 1 boinc boinc     21182 Apr 19 06:59 stderr.txt
[2025-04-19 06:59:13] HITS file was successfully produced:
[2025-04-19 06:59:13] -rw------- 1 boinc boinc 199683028 Apr 19 06:58 shared/HITS.pool.root.1
[2025-04-19 06:59:13]  *** Contents of shared directory: ***
[2025-04-19 06:59:13] total 414200
[2025-04-19 06:59:13] -rw-r--r-- 2 boinc boinc 222674565 Apr 19 04:15 ATLAS.root_0
[2025-04-19 06:59:13] -rw-r--r-- 2 boinc boinc     17569 Apr 19 04:15 start_atlas.sh
[2025-04-19 06:59:13] -rw-r--r-- 2 boinc boinc    508893 Apr 19 04:15 input.tar.gz
[2025-04-19 06:59:13] -rw------- 1 boinc boinc 199683028 Apr 19 06:58 HITS.pool.root.1
[2025-04-19 06:59:13] -rw------- 1 boinc boinc   1239040 Apr 19 06:59 result.tar.gz
06:59:15 (3640507): run_atlas exited; CPU time 36116.742644
06:59:15 (3640507): called boinc_finish(0)

</stderr_txt>
]]>

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