Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
06:32:03 (18298): wrapper (7.7.26015): starting
06:32:03 (18298): wrapper: running run_atlas (--nthreads 9)
[2025-04-18 06:32:03] Arguments: --nthreads 9
[2025-04-18 06:32:03] Threads: 9
[2025-04-18 06:32:03] Checking for CVMFS
[2025-04-18 06:32:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-18 06:32:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-18 06:32:04] Running cvmfs_config stat atlas.cern.ch
[2025-04-18 06:32:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-18 06:32:05] 2.11.2.0 52050 40731 195160 144999 3 265 9962445 18431716 12715 130560 0 109259510 98.589 331583365 44448 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-18 06:32:05] CVMFS is ok
[2025-04-18 06:32:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-18 06:32:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-18 06:32:05] Further information can be found at the LHC@home message board.
[2025-04-18 06:32:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-18 06:32:05] Checking for apptainer binary...
[2025-04-18 06:32:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-18 06:32:05] Running /usr/bin/apptainer --version
[2025-04-18 06:32:05] apptainer version 1.3.2-1.el7
[2025-04-18 06:32:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-18 06:32:15] c-210-31-2.aglt2.org
[2025-04-18 06:32:15] apptainer works
[2025-04-18 06:32:15] Set ATHENA_PROC_NUMBER=9
[2025-04-18 06:32:15] Set ATHENA_CORE_NUMBER=9
[2025-04-18 06:32:15] Starting ATLAS job with PandaID=6606057063
[2025-04-18 06:32:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-18 12:43:46]  *** The last 200 lines of the pilot log: ***
[2025-04-18 12:43:46] 2025-04-18 16:43:31,139 | INFO     | -- intersect: -34678759042.24706
[2025-04-18 12:43:46] 2025-04-18 16:43:31,139 | INFO     | intersect: -34678759042.24706
[2025-04-18 12:43:46] 2025-04-18 16:43:31,139 | INFO     | chi2: 6.980930942353694
[2025-04-18 12:43:46] 2025-04-18 16:43:31,140 | INFO     | current chi2=6.980930942353694 (change=9.754348924804173 %)
[2025-04-18 12:43:46] 2025-04-18 16:43:31,140 | INFO     | right removable region: 357
[2025-04-18 12:43:46] 2025-04-18 16:43:31,140 | INFO     | sum of square deviations: 14227688950.192677
[2025-04-18 12:43:46] 2025-04-18 16:43:31,142 | INFO     | sum of deviations: 156610062981.92163
[2025-04-18 12:43:46] 2025-04-18 16:43:31,143 | INFO     | mean x: 1744983660.952514
[2025-04-18 12:43:46] 2025-04-18 16:43:31,143 | INFO     | mean y: 2483467.6424581003
[2025-04-18 12:43:46] 2025-04-18 16:43:31,143 | INFO     | -- intersect: -19205274166.14363
[2025-04-18 12:43:46] 2025-04-18 16:43:31,143 | INFO     | intersect: -19205274166.14363
[2025-04-18 12:43:46] 2025-04-18 16:43:31,143 | INFO     | chi2: 4.389053839608682
[2025-04-18 12:43:46] 2025-04-18 16:43:31,143 | INFO     | current chi2=4.389053839608682 (change=43.26071628119749 %)
[2025-04-18 12:43:46] 2025-04-18 16:43:31,144 | INFO     | sum of square deviations: 13639805261.654322
[2025-04-18 12:43:46] 2025-04-18 16:43:31,146 | INFO     | sum of deviations: 76770339080.78474
[2025-04-18 12:43:46] 2025-04-18 16:43:31,146 | INFO     | mean x: 1744983813.4589236
[2025-04-18 12:43:46] 2025-04-18 16:43:31,146 | INFO     | mean y: 2504174.4334277622
[2025-04-18 12:43:46] 2025-04-18 16:43:31,146 | INFO     | -- intersect: -9818970287.986757
[2025-04-18 12:43:46] 2025-04-18 16:43:31,146 | INFO     | intersect: -9818970287.986757
[2025-04-18 12:43:46] 2025-04-18 16:43:31,147 | INFO     | chi2: 2.6037871011467035
[2025-04-18 12:43:46] 2025-04-18 16:43:31,147 | INFO     | current chi2=2.6037871011467035 (change=40.67543492747742 %)
[2025-04-18 12:43:46] 2025-04-18 16:43:31,148 | INFO     | sum of square deviations: 13068340485.586193
[2025-04-18 12:43:46] 2025-04-18 16:43:31,150 | INFO     | sum of deviations: -429331049.2413788
[2025-04-18 12:43:46] 2025-04-18 16:43:31,150 | INFO     | mean x: 1744983965.9655173
[2025-04-18 12:43:46] 2025-04-18 16:43:31,150 | INFO     | mean y: 2524777.4798850575
[2025-04-18 12:43:46] 2025-04-18 16:43:31,150 | INFO     | -- intersect: 59852316.33944155
[2025-04-18 12:43:46] 2025-04-18 16:43:31,150 | INFO     | intersect: 59852316.33944155
[2025-04-18 12:43:46] 2025-04-18 16:43:31,151 | INFO     | chi2: 0.9495813494467774
[2025-04-18 12:43:46] 2025-04-18 16:43:31,151 | INFO     | current chi2=0.9495813494467774 (change=63.530760674381426 %)
[2025-04-18 12:43:46] 2025-04-18 16:43:31,151 | INFO     | sum of square deviations: 12513062059.486904
[2025-04-18 12:43:46] 2025-04-18 16:43:31,154 | INFO     | sum of deviations: -17604609107.635567
[2025-04-18 12:43:46] 2025-04-18 16:43:31,154 | INFO     | mean x: 1744984118.4723032
[2025-04-18 12:43:46] 2025-04-18 16:43:31,154 | INFO     | mean y: 2529460.8804664724
[2025-04-18 12:43:46] 2025-04-18 16:43:31,154 | INFO     | -- intersect: 2457545120.4125338
[2025-04-18 12:43:46] 2025-04-18 16:43:31,154 | INFO     | intersect: 2457545120.4125338
[2025-04-18 12:43:46] 2025-04-18 16:43:31,154 | INFO     | chi2: 0.8016288909775797
[2025-04-18 12:43:46] 2025-04-18 16:43:31,155 | INFO     | current chi2=0.8016288909775797 (change=15.580809222442527 %)
[2025-04-18 12:43:46] 2025-04-18 16:43:31,155 | INFO     | left removable region: 40
[2025-04-18 12:43:46] 2025-04-18 16:43:31,155 | INFO     | sum of square deviations: 9877722607.249279
[2025-04-18 12:43:46] 2025-04-18 16:43:31,157 | INFO     | sum of deviations: 8066589238.511042
[2025-04-18 12:43:46] 2025-04-18 16:43:31,157 | INFO     | mean x: 1744984545.5015774
[2025-04-18 12:43:46] 2025-04-18 16:43:31,157 | INFO     | mean y: 2535048.977917981
[2025-04-18 12:43:46] 2025-04-18 16:43:31,157 | INFO     | -- intersect: -1422497229.7966094
[2025-04-18 12:43:46] 2025-04-18 16:43:31,157 | INFO     | intersect: -1422497229.7966094
[2025-04-18 12:43:46] 2025-04-18 16:43:31,158 | INFO     | chi2: 0.0010699704885961745
[2025-04-18 12:43:46] 2025-04-18 16:43:31,158 | INFO     | -- intersect: -1422497229.7966094
[2025-04-18 12:43:46] 2025-04-18 16:43:31,158 | INFO     | current memory leak: 0.82 B/s (using 317 data points, chi2=0.00)
[2025-04-18 12:43:46] 2025-04-18 16:43:31,159 | INFO     | ..............................
[2025-04-18 12:43:46] 2025-04-18 16:43:31,159 | INFO     | . Timing measurements:
[2025-04-18 12:43:46] 2025-04-18 16:43:31,159 | INFO     | . get job = 0 s
[2025-04-18 12:43:46] 2025-04-18 16:43:31,159 | INFO     | . initial setup = 3 s
[2025-04-18 12:43:46] 2025-04-18 16:43:31,159 | INFO     | . payload setup = 16 s
[2025-04-18 12:43:46] 2025-04-18 16:43:31,159 | INFO     | . stage-in = 0 s
[2025-04-18 12:43:46] 2025-04-18 16:43:31,159 | INFO     | . payload execution = 22133 s
[2025-04-18 12:43:46] 2025-04-18 16:43:31,159 | INFO     | . stage-out = 2 s
[2025-04-18 12:43:46] 2025-04-18 16:43:31,159 | INFO     | . log creation = 0 s
[2025-04-18 12:43:46] 2025-04-18 16:43:31,159 | INFO     | ..............................
[2025-04-18 12:43:46] 2025-04-18 16:43:31,256 | INFO     | sufficient remaining disk space (56007589888 B)
[2025-04-18 12:43:46] 2025-04-18 16:43:31,256 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-04-18 12:43:46] 2025-04-18 16:43:31,257 | INFO     | size of work directory /tmp/boinchome/slots/0/PanDA_Pilot-6606057063: 4188680 B (within 2537553920 B limit)
[2025-04-18 12:43:46] 2025-04-18 16:43:31,257 | INFO     | pfn file=/tmp/boinchome/slots/0/PanDA_Pilot-6606057063/HITS.44075483._063446.pool.root.1 does not exist (skip from workdir size calculation)
[2025-04-18 12:43:46] 2025-04-18 16:43:31,257 | INFO     | total size of present files: 0 B (workdir size: 4188680 B)
[2025-04-18 12:43:46] 2025-04-18 16:43:31,258 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6606057063/HITS.44075483._063446.pool.root.1 since it does not exist
[2025-04-18 12:43:46] 2025-04-18 16:43:31,505 | INFO     | 
[2025-04-18 12:43:46] 2025-04-18 16:43:31,505 | INFO     | job summary report
[2025-04-18 12:43:46] 2025-04-18 16:43:31,505 | INFO     | --------------------------------------------------
[2025-04-18 12:43:46] 2025-04-18 16:43:31,506 | INFO     | PanDA job id: 6606057063
[2025-04-18 12:43:46] 2025-04-18 16:43:31,506 | INFO     | task id: 44075483
[2025-04-18 12:43:46] 2025-04-18 16:43:31,506 | INFO     | errors: (none)
[2025-04-18 12:43:46] 2025-04-18 16:43:31,506 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-18 12:43:46] 2025-04-18 16:43:31,506 | INFO     | pilot state: finished 
[2025-04-18 12:43:46] 2025-04-18 16:43:31,506 | INFO     | transexitcode: 0
[2025-04-18 12:43:46] 2025-04-18 16:43:31,506 | INFO     | exeerrorcode: 0
[2025-04-18 12:43:46] 2025-04-18 16:43:31,506 | INFO     | exeerrordiag: 
[2025-04-18 12:43:46] 2025-04-18 16:43:31,506 | INFO     | exitcode: 0
[2025-04-18 12:43:46] 2025-04-18 16:43:31,508 | INFO     | exitmsg: OK
[2025-04-18 12:43:46] 2025-04-18 16:43:31,508 | INFO     | cpuconsumptiontime: 46236 s
[2025-04-18 12:43:46] 2025-04-18 16:43:31,508 | INFO     | nevents: 400
[2025-04-18 12:43:46] 2025-04-18 16:43:31,509 | INFO     | neventsw: 0
[2025-04-18 12:43:46] 2025-04-18 16:43:31,509 | INFO     | pid: 42418
[2025-04-18 12:43:46] 2025-04-18 16:43:31,509 | INFO     | pgrp: 42418
[2025-04-18 12:43:46] 2025-04-18 16:43:31,509 | INFO     | corecount: 9
[2025-04-18 12:43:46] 2025-04-18 16:43:31,509 | INFO     | event service: False
[2025-04-18 12:43:46] 2025-04-18 16:43:31,509 | INFO     | sizes: {0: 2425996, 1: 2426852, 2: 2426852, 13: 2426880, 23: 2426936, 29: 2427170, 34: 2427326, 22154: 2460762, 22155: 2460761, 22158: 2469758, 22159: 2469814, 221
[2025-04-18 12:43:46] 2025-04-18 16:43:31,509 | INFO     | --------------------------------------------------
[2025-04-18 12:43:46] 2025-04-18 16:43:31,509 | INFO     | 
[2025-04-18 12:43:46] 2025-04-18 16:43:31,509 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-18 12:43:46] 2025-04-18 16:43:31,547 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-18 12:43:46] 2025-04-18 16:43:31,547 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-18 12:43:46] 2025-04-18 16:43:31,547 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-18 12:43:46] 2025-04-18 16:43:31,547 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-18 12:43:46] 2025-04-18 16:43:31,548 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-18 12:43:46] 2025-04-18 16:43:31,548 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-18 12:43:46] 2025-04-18 16:43:31,548 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-18 12:43:46] 2025-04-18 16:43:31,548 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-18 12:43:46] 2025-04-18 16:43:31,548 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-18 12:43:46] 2025-04-18 16:43:31,548 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-18 12:43:46] 2025-04-18 16:43:31,548 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-18 12:43:46] 2025-04-18 16:43:31,548 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-18 12:43:46] 2025-04-18 16:43:31,548 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-18 12:43:46] 2025-04-18 16:43:31,548 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-18 12:43:46] 2025-04-18 16:43:31,549 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-18 12:43:46] 2025-04-18 16:43:31,549 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-18 12:43:46] 2025-04-18 16:43:31,549 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-18 12:43:46] 2025-04-18 16:43:31,549 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-18 12:43:46] 2025-04-18 16:43:31,549 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-18 12:43:46] 2025-04-18 16:43:31,549 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-18 12:43:46] 2025-04-18 16:43:31,549 | INFO     | job 6606057063 has completed (purged errors)
[2025-04-18 12:43:46] 2025-04-18 16:43:31,549 | INFO     | overall cleanup function is called
[2025-04-18 12:43:46] 2025-04-18 16:43:31,596 | INFO     | number of running child processes to parent process 42418: 1
[2025-04-18 12:43:46] 2025-04-18 16:43:31,597 | INFO     | maximum number of monitored processes: 6
[2025-04-18 12:43:46] 2025-04-18 16:43:31,597 | INFO     | aborting job monitoring since job object (job id=6606057063) has expired
[2025-04-18 12:43:46] 2025-04-18 16:43:32,563 | INFO     | --- collectZombieJob: --- 10, [42418]
[2025-04-18 12:43:46] 2025-04-18 16:43:32,563 | INFO     | zombie collector waiting for pid 42418
[2025-04-18 12:43:46] 2025-04-18 16:43:32,564 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-18 12:43:46] 2025-04-18 16:43:32,564 | INFO     | collected zombie processes
[2025-04-18 12:43:46] 2025-04-18 16:43:32,564 | INFO     | will attempt to kill all subprocesses of pid=42418
[2025-04-18 12:43:46] 2025-04-18 16:43:32,881 | INFO     | process IDs to be killed: [42418] (in reverse order)
[2025-04-18 12:43:46] 2025-04-18 16:43:33,002 | WARNING  | found no corresponding commands to process id(s)
[2025-04-18 12:43:46] 2025-04-18 16:43:33,002 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-18 12:43:46] 2025-04-18 16:43:33,013 | INFO     | did not find any defunct processes belonging to 42418
[2025-04-18 12:43:46] 2025-04-18 16:43:33,022 | INFO     | did not find any defunct processes belonging to 42418
[2025-04-18 12:43:46] 2025-04-18 16:43:33,023 | INFO     | ready for new job
[2025-04-18 12:43:46] 2025-04-18 16:43:33,023 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-18 12:43:46] 2025-04-18 16:43:33,025 | INFO     | **************************************
[2025-04-18 12:43:46] 2025-04-18 16:43:33,025 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-18 12:43:46] 2025-04-18 16:43:33,025 | INFO     | **************************************
[2025-04-18 12:43:46] 2025-04-18 16:43:33,025 | INFO     | 
[2025-04-18 12:43:46] 2025-04-18 16:43:33,029 | INFO     | architecture information:
[2025-04-18 12:43:46] 2025-04-18 16:43:33,033 | INFO     | executing command: cat /etc/os-release
[2025-04-18 12:43:46] 2025-04-18 16:43:33,053 | INFO     | cat /etc/os-release:
[2025-04-18 12:43:46] NAME="CentOS Linux"
[2025-04-18 12:43:46] VERSION="7 (Core)"
[2025-04-18 12:43:46] ID="centos"
[2025-04-18 12:43:46] ID_LIKE="rhel fedora"
[2025-04-18 12:43:46] VERSION_ID="7"
[2025-04-18 12:43:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-18 12:43:46] ANSI_COLOR="0;31"
[2025-04-18 12:43:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-18 12:43:46] HOME_URL="https://www.centos.org/"
[2025-04-18 12:43:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-18 12:43:46] 
[2025-04-18 12:43:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-18 12:43:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-18 12:43:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-18 12:43:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-18 12:43:46] 
[2025-04-18 12:43:46] 2025-04-18 16:43:33,054 | INFO     | **************************************
[2025-04-18 12:43:46] 2025-04-18 16:43:33,556 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-18 12:43:46] 2025-04-18 16:43:33,699 | INFO     | sufficient remaining disk space (56013881344 B)
[2025-04-18 12:43:46] 2025-04-18 16:43:33,699 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-18 12:43:46] 2025-04-18 16:43:33,700 | INFO     | current server update state: UPDATING_FINAL
[2025-04-18 12:43:46] 2025-04-18 16:43:33,700 | INFO     | update_server=False
[2025-04-18 12:43:46] 2025-04-18 16:43:33,700 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-18 12:43:46] 2025-04-18 16:43:33,700 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-18 12:43:46] 2025-04-18 16:43:33,746 | INFO     | all payload control threads have been joined
[2025-04-18 12:43:46] 2025-04-18 16:43:33,763 | INFO     | all job control threads have been joined
[2025-04-18 12:43:46] 2025-04-18 16:43:34,100 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-04-18 12:43:46] 2025-04-18 16:43:34,101 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-04-18 12:43:46] 2025-04-18 16:43:34,101 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-18 12:43:46] 2025-04-18 16:43:34,101 | INFO     | will abort loop
[2025-04-18 12:43:46] 2025-04-18 16:43:34,704 | INFO     | found 0 job(s) in 20 queues
[2025-04-18 12:43:46] 2025-04-18 16:43:34,704 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-18 12:43:46] 2025-04-18 16:43:34,705 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-18 12:43:46] 2025-04-18 16:43:34,706 | INFO     | [job] retrieve thread has finished
[2025-04-18 12:43:46] 2025-04-18 16:43:34,738 | INFO     | all data control threads have been joined
[2025-04-18 12:43:46] 2025-04-18 16:43:34,751 | INFO     | [payload] control thread has finished
[2025-04-18 12:43:46] 2025-04-18 16:43:34,768 | INFO     | [job] control thread has finished
[2025-04-18 12:43:46] 2025-04-18 16:43:34,796 | INFO     | [payload] validate_post thread has finished
[2025-04-18 12:43:46] 2025-04-18 16:43:34,975 | INFO     | [payload] validate_pre thread has finished
[2025-04-18 12:43:46] 2025-04-18 16:43:34,977 | INFO     | [job] validate thread has finished
[2025-04-18 12:43:46] 2025-04-18 16:43:35,004 | INFO     | [data] copytool_in thread has finished
[2025-04-18 12:43:46] 2025-04-18 16:43:35,107 | INFO     | [job] job monitor thread has finished
[2025-04-18 12:43:46] 2025-04-18 16:43:35,428 | INFO     | [payload] execute_payloads thread has finished
[2025-04-18 12:43:46] 2025-04-18 16:43:35,592 | INFO     | [payload] failed_post thread has finished
[2025-04-18 12:43:46] 2025-04-18 16:43:35,707 | INFO     | [data] copytool_out thread has finished
[2025-04-18 12:43:46] 2025-04-18 16:43:35,744 | INFO     | [data] control thread has finished
[2025-04-18 12:43:46] 2025-04-18 16:43:36,081 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-18 12:43:46] 2025-04-18 16:43:36,137 | INFO     | [job] create_data_payload thread has finished
[2025-04-18 12:43:46] 2025-04-18 16:43:36,189 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-18 12:43:46] 2025-04-18 16:43:36,339 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-18 12:43:46] 2025-04-18 16:43:37,346 | INFO     | [job] queue monitor thread has finished
[2025-04-18 12:43:46] 2025-04-18 16:43:40,090 | INFO     | [data] queue_monitor thread has finished
[2025-04-18 12:43:46] 2025-04-18 16:43:40,183 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140421259175744)>', '<ExcThread(monitor, started 140420960986880)>']
[2025-04-18 12:43:46] 2025-04-18 16:43:40,740 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-18 12:43:46] 2025-04-18 16:43:40,740 | INFO     | [monitor] control thread has ended
[2025-04-18 12:43:46] 2025-04-18 16:43:45,208 | INFO     | all workflow threads have been joined
[2025-04-18 12:43:46] 2025-04-18 16:43:45,208 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-18 12:43:46] 2025-04-18 16:43:45,209 | INFO     | traces error code: 0
[2025-04-18 12:43:46] 2025-04-18 16:43:45,209 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-18 12:43:46] 2025-04-18 16:43:45,880 [wrapper] ==== pilot stdout END ====
[2025-04-18 12:43:46] 2025-04-18 16:43:45,884 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-18 12:43:46] 2025-04-18 16:43:45,896 [wrapper] pilotpid: 24330
[2025-04-18 12:43:46] 2025-04-18 16:43:45,900 [wrapper] Pilot exit status: 0
[2025-04-18 12:43:46] 2025-04-18 16:43:45,944 [wrapper] pandaids: 6606057063
[2025-04-18 12:43:46] 2025-04-18 16:43:46,023 [wrapper] cleanup supervisor_pilot 270006 24331
[2025-04-18 12:43:46] 2025-04-18 16:43:46,039 [wrapper] Test setup, not cleaning
[2025-04-18 12:43:46] 2025-04-18 16:43:46,046 [wrapper] apfmon messages muted
[2025-04-18 12:43:46] 2025-04-18 16:43:46,049 [wrapper] ==== wrapper stdout END ====
[2025-04-18 12:43:46] 2025-04-18 16:43:46,053 [wrapper] ==== wrapper stderr END ====
[2025-04-18 12:43:46]  *** Error codes and diagnostics ***
[2025-04-18 12:43:46]     "exeErrorCode": 0,
[2025-04-18 12:43:46]     "exeErrorDiag": "",
[2025-04-18 12:43:46]     "pilotErrorCode": 0,
[2025-04-18 12:43:46]     "pilotErrorDiag": "",
[2025-04-18 12:43:46]  *** Listing of results directory ***
[2025-04-18 12:43:46] total 426300
[2025-04-18 12:43:46] -rw-r--r-- 1 boincer umatlas    495897 Apr 17 22:49 pilot3.tar.gz
[2025-04-18 12:43:46] -rw-r--r-- 1 boincer umatlas      5111 Apr 17 22:55 queuedata.json
[2025-04-18 12:43:46] -rwx------ 1 boincer umatlas     37140 Apr 17 22:55 runpilot2-wrapper.sh
[2025-04-18 12:43:46] -rw-r--r-- 1 boincer umatlas       100 Apr 18 06:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-18 12:43:46] -rwxr-xr-x 1 boincer umatlas      7986 Apr 18 06:31 run_atlas
[2025-04-18 12:43:46] -rw-r--r-- 1 boincer umatlas       105 Apr 18 06:31 job.xml
[2025-04-18 12:43:46] -rw-r--r-- 2 boincer umatlas 223404705 Apr 18 06:32 EVNT.44075481._002466.pool.root.1
[2025-04-18 12:43:46] drwxrwx--x 2 boincer umatlas      4096 Apr 18 06:32 shared
[2025-04-18 12:43:46] -rw-r--r-- 2 boincer umatlas    508891 Apr 18 06:32 input.tar.gz
[2025-04-18 12:43:46] -rw-r--r-- 2 boincer umatlas     17569 Apr 18 06:32 start_atlas.sh
[2025-04-18 12:43:46] -rw-r--r-- 1 boincer umatlas         0 Apr 18 06:32 boinc_lockfile
[2025-04-18 12:43:46] -rw-r--r-- 1 boincer umatlas      2579 Apr 18 06:32 pandaJob.out
[2025-04-18 12:43:46] -rw------- 1 boincer umatlas       467 Apr 18 06:32 setup.sh.local
[2025-04-18 12:43:46] -rw------- 1 boincer umatlas    990559 Apr 18 06:32 agis_schedconf.cvmfs.json
[2025-04-18 12:43:46] drwx------ 4 boincer umatlas      4096 Apr 18 06:33 pilot3
[2025-04-18 12:43:46] -rw-r--r-- 1 boincer umatlas      6355 Apr 18 12:39 init_data.xml
[2025-04-18 12:43:46] -rw------- 1 boincer umatlas 204771158 Apr 18 12:41 HITS.44075483._063446.pool.root.1
[2025-04-18 12:43:46] -rw-r--r-- 1 boincer umatlas       531 Apr 18 12:42 boinc_task_state.xml
[2025-04-18 12:43:46] -rw------- 1 boincer umatlas      1055 Apr 18 12:43 memory_monitor_summary.json
[2025-04-18 12:43:46] -rw------- 1 boincer umatlas   1618536 Apr 18 12:43 agis_ddmendpoints.agis.ALL.json
[2025-04-18 12:43:46] -rw------- 1 boincer umatlas    479471 Apr 18 12:43 log.44075483._063446.job.log.tgz.1
[2025-04-18 12:43:46] -rw------- 1 boincer umatlas      7748 Apr 18 12:43 heartbeat.json
[2025-04-18 12:43:46] -rw-r--r-- 1 boincer umatlas      8192 Apr 18 12:43 boinc_mmap_file
[2025-04-18 12:43:46] -rw------- 1 boincer umatlas        95 Apr 18 12:43 pilot_heartbeat.json
[2025-04-18 12:43:46] -rw-r--r-- 1 boincer umatlas        28 Apr 18 12:43 wrapper_checkpoint.txt
[2025-04-18 12:43:46] -rw------- 1 boincer umatlas      4539 Apr 18 12:43 pilotlog.txt
[2025-04-18 12:43:46] -rw------- 1 boincer umatlas   1765487 Apr 18 12:43 log.44075483._063446.job.log.1
[2025-04-18 12:43:46] -rw------- 1 boincer umatlas       357 Apr 18 12:43 output.list
[2025-04-18 12:43:46] -rw-r--r-- 1 boincer umatlas       620 Apr 18 12:43 runtime_log
[2025-04-18 12:43:46] -rw------- 1 boincer umatlas   2263040 Apr 18 12:43 result.tar.gz
[2025-04-18 12:43:46] -rw------- 1 boincer umatlas       664 Apr 18 12:43 vNyNDm13qP7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmTGeLDmL5y5Ho.diag
[2025-04-18 12:43:46] -rw-r--r-- 1 boincer umatlas     11429 Apr 18 12:43 runtime_log.err
[2025-04-18 12:43:46] -rw-r--r-- 1 boincer umatlas     21352 Apr 18 12:43 stderr.txt
[2025-04-18 12:43:46] HITS file was successfully produced:
[2025-04-18 12:43:46] -rw------- 1 boincer umatlas 204771158 Apr 18 12:41 shared/HITS.pool.root.1
[2025-04-18 12:43:46]  *** Contents of shared directory: ***
[2025-04-18 12:43:46] total 420880
[2025-04-18 12:43:46] -rw-r--r-- 2 boincer umatlas 223404705 Apr 18 06:32 ATLAS.root_0
[2025-04-18 12:43:46] -rw-r--r-- 2 boincer umatlas    508891 Apr 18 06:32 input.tar.gz
[2025-04-18 12:43:46] -rw-r--r-- 2 boincer umatlas     17569 Apr 18 06:32 start_atlas.sh
[2025-04-18 12:43:46] -rw------- 1 boincer umatlas 204771158 Apr 18 12:41 HITS.pool.root.1
[2025-04-18 12:43:46] -rw------- 1 boincer umatlas   2263040 Apr 18 12:43 result.tar.gz
12:43:47 (18298): run_atlas exited; CPU time 46717.075603
12:43:47 (18298): called boinc_finish(0)

</stderr_txt>
]]>

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