Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
02:14:09 (29979): wrapper (7.7.26015): starting
02:14:09 (29979): wrapper: running run_atlas (--nthreads 12)
[2025-04-18 02:14:09] Arguments: --nthreads 12
[2025-04-18 02:14:09] Threads: 12
[2025-04-18 02:14:09] Checking for CVMFS
[2025-04-18 02:14:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-18 02:14:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-18 02:14:10] Running cvmfs_config stat atlas.cern.ch
[2025-04-18 02:14:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-18 02:14:10] 2.11.2.0 10400 367602 161088 144992 1 56 18613637 20275201 1 130560 0 22927005 99.990 6977875 55512 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-18 02:14:10] CVMFS is ok
[2025-04-18 02:14:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-18 02:14:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-18 02:14:10] Further information can be found at the LHC@home message board.
[2025-04-18 02:14:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-18 02:14:10] Checking for apptainer binary...
[2025-04-18 02:14:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-18 02:14:10] Running /usr/bin/apptainer --version
[2025-04-18 02:14:10] apptainer version 1.3.2-1.el7
[2025-04-18 02:14:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-18 02:14:11] c-205-26.aglt2.org
[2025-04-18 02:14:11] apptainer works
[2025-04-18 02:14:11] Set ATHENA_PROC_NUMBER=12
[2025-04-18 02:14:11] Set ATHENA_CORE_NUMBER=12
[2025-04-18 02:14:11] Starting ATLAS job with PandaID=6603698055
[2025-04-18 02:14:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-18 03:39:07]  *** The last 200 lines of the pilot log: ***
[2025-04-18 03:39:07]  lfn=log.44075483._033888.job.log.tgz.1
[2025-04-18 03:39:07]  mtime=0
[2025-04-18 03:39:07]  protocol_id=None
[2025-04-18 03:39:07]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-18 03:39:07]  replicas=None
[2025-04-18 03:39:07]  scope=mc23_13p6TeV
[2025-04-18 03:39:07]  status=None
[2025-04-18 03:39:07]  status_code=0
[2025-04-18 03:39:07]  storage_token=
[2025-04-18 03:39:07]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6603698055/log.44075483._033888.job.log.tgz.1
[2025-04-18 03:39:07]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5b/60/log.44075483._033888.job.log.tgz.1
[2025-04-18 03:39:07]  workdir=None
[2025-04-18 03:39:07] ]
[2025-04-18 03:39:07] 2025-04-18 07:38:38,923 | INFO     | transferring file log.44075483._033888.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6603698055/log.44075483._033888.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-04-18 03:39:07] 2025-04-18 07:38:38,923 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6603698055/log.44075483._033888.job.log.tgz.1 /tmp/boinchome/slots/0/log.44075483._033888.job
[2025-04-18 03:39:07] 2025-04-18 07:38:38,946 | INFO     | adding to output.list: log.44075483._033888.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5b/60/log.44075483._033888.job.log.tg
[2025-04-18 03:39:07] 2025-04-18 07:38:38,947 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-18 03:39:07] 2025-04-18 07:38:38,947 | INFO     | summary of transferred files:
[2025-04-18 03:39:07] 2025-04-18 07:38:38,947 | INFO     |  -- lfn=log.44075483._033888.job.log.tgz.1, status_code=0, status=transferred
[2025-04-18 03:39:07] 2025-04-18 07:38:38,948 | INFO     | stage-out finished correctly
[2025-04-18 03:39:07] 2025-04-18 07:38:40,238 | INFO     | monitor loop #378: job 0:6603698055 is in state 'finished'
[2025-04-18 03:39:07] 2025-04-18 07:38:40,239 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-18 03:39:07] 2025-04-18 07:38:41,499 | INFO     | PID=1144 has CPU usage=6.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-04-18 03:39:07] 2025-04-18 07:38:41,590 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-18 03:39:07] 2025-04-18 07:38:42,742 | INFO     | monitor loop #379: job 0:6603698055 is in state 'finished'
[2025-04-18 03:39:07] 2025-04-18 07:38:42,742 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-18 03:39:07] 2025-04-18 07:38:43,781 | INFO     | job 6603698055 has state=finished
[2025-04-18 03:39:07] 2025-04-18 07:38:43,781 | INFO     | preparing for final server update for job 6603698055 in state='finished'
[2025-04-18 03:39:07] 2025-04-18 07:38:43,782 | INFO     | this job has now completed (state=finished)
[2025-04-18 03:39:07] 2025-04-18 07:38:43,782 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-18 03:39:07] 2025-04-18 07:38:43,782 | INFO     | log transfer has been attempted: DONE
[2025-04-18 03:39:07] 2025-04-18 07:38:43,783 | INFO     | job 6603698055 has finished - writing final server update
[2025-04-18 03:39:07] 2025-04-18 07:38:43,783 | INFO     | total number of processed events: 400 (read)
[2025-04-18 03:39:07] 2025-04-18 07:38:43,785 | INFO     | executing command: lscpu
[2025-04-18 03:39:07] 2025-04-18 07:38:43,812 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-18 03:39:07] 2025-04-18 07:38:45,245 | INFO     | monitor loop #380: job 0:6603698055 is in state 'finished'
[2025-04-18 03:39:07] 2025-04-18 07:38:45,246 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-18 03:39:07] 2025-04-18 07:38:47,749 | INFO     | monitor loop #381: job 0:6603698055 is in state 'finished'
[2025-04-18 03:39:07] 2025-04-18 07:38:47,749 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-18 03:39:07] 2025-04-18 07:38:48,507 | INFO     | CPU arch script returned: x86-64-v2
[2025-04-18 03:39:07] 2025-04-18 07:38:48,508 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6603698055/memory_monitor_summary.json (trf name=prmon)
[2025-04-18 03:39:07] 2025-04-18 07:38:48,509 | INFO     | extracted standard info from prmon json
[2025-04-18 03:39:07] 2025-04-18 07:38:48,509 | INFO     | extracted standard memory fields from prmon json
[2025-04-18 03:39:07] 2025-04-18 07:38:48,509 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-18 03:39:07] 2025-04-18 07:38:48,509 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-18 03:39:07] 2025-04-18 07:38:48,509 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-18 03:39:07] 2025-04-18 07:38:48,512 | INFO     | fitting pss+swap vs Time
[2025-04-18 03:39:07] 2025-04-18 07:38:48,513 | INFO     | sum of square deviations: 136095575.0
[2025-04-18 03:39:07] 2025-04-18 07:38:48,513 | INFO     | sum of deviations: 27771107354.999996
[2025-04-18 03:39:07] 2025-04-18 07:38:48,513 | INFO     | mean x: 1744959485.5
[2025-04-18 03:39:07] 2025-04-18 07:38:48,513 | INFO     | mean y: 2546517.447368421
[2025-04-18 03:39:07] 2025-04-18 07:38:48,514 | INFO     | -- intersect: -356066761407.85486
[2025-04-18 03:39:07] 2025-04-18 07:38:48,514 | INFO     | intersect: -356066761407.85486
[2025-04-18 03:39:07] 2025-04-18 07:38:48,514 | INFO     | chi2: 2.7984116526303993
[2025-04-18 03:39:07] 2025-04-18 07:38:48,514 | INFO     | -- intersect: -356066761407.85486
[2025-04-18 03:39:07] 2025-04-18 07:38:48,515 | INFO     | current memory leak: 204.06 B/s (using 76 data points, chi2=2.80)
[2025-04-18 03:39:07] 2025-04-18 07:38:48,515 | INFO     | ..............................
[2025-04-18 03:39:07] 2025-04-18 07:38:48,515 | INFO     | . Timing measurements:
[2025-04-18 03:39:07] 2025-04-18 07:38:48,515 | INFO     | . get job = 0 s
[2025-04-18 03:39:07] 2025-04-18 07:38:48,516 | INFO     | . initial setup = 2 s
[2025-04-18 03:39:07] 2025-04-18 07:38:48,516 | INFO     | . payload setup = 7 s
[2025-04-18 03:39:07] 2025-04-18 07:38:48,516 | INFO     | . stage-in = 0 s
[2025-04-18 03:39:07] 2025-04-18 07:38:48,516 | INFO     | . payload execution = 5025 s
[2025-04-18 03:39:07] 2025-04-18 07:38:48,516 | INFO     | . stage-out = 0 s
[2025-04-18 03:39:07] 2025-04-18 07:38:48,516 | INFO     | . log creation = 0 s
[2025-04-18 03:39:07] 2025-04-18 07:38:48,516 | INFO     | ..............................
[2025-04-18 03:39:07] 2025-04-18 07:38:48,602 | INFO     | 
[2025-04-18 03:39:07] 2025-04-18 07:38:48,602 | INFO     | job summary report
[2025-04-18 03:39:07] 2025-04-18 07:38:48,602 | INFO     | --------------------------------------------------
[2025-04-18 03:39:07] 2025-04-18 07:38:48,602 | INFO     | PanDA job id: 6603698055
[2025-04-18 03:39:07] 2025-04-18 07:38:48,602 | INFO     | task id: 44075483
[2025-04-18 03:39:07] 2025-04-18 07:38:48,602 | INFO     | errors: (none)
[2025-04-18 03:39:07] 2025-04-18 07:38:48,603 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-18 03:39:07] 2025-04-18 07:38:48,603 | INFO     | pilot state: finished 
[2025-04-18 03:39:07] 2025-04-18 07:38:48,603 | INFO     | transexitcode: 0
[2025-04-18 03:39:07] 2025-04-18 07:38:48,603 | INFO     | exeerrorcode: 0
[2025-04-18 03:39:07] 2025-04-18 07:38:48,603 | INFO     | exeerrordiag: 
[2025-04-18 03:39:07] 2025-04-18 07:38:48,603 | INFO     | exitcode: 0
[2025-04-18 03:39:07] 2025-04-18 07:38:48,604 | INFO     | exitmsg: OK
[2025-04-18 03:39:07] 2025-04-18 07:38:48,604 | INFO     | cpuconsumptiontime: 48123 s
[2025-04-18 03:39:07] 2025-04-18 07:38:48,604 | INFO     | nevents: 400
[2025-04-18 03:39:07] 2025-04-18 07:38:48,604 | INFO     | neventsw: 0
[2025-04-18 03:39:07] 2025-04-18 07:38:48,604 | INFO     | pid: 7645
[2025-04-18 03:39:07] 2025-04-18 07:38:48,604 | INFO     | pgrp: 7645
[2025-04-18 03:39:07] 2025-04-18 07:38:48,605 | INFO     | corecount: 12
[2025-04-18 03:39:07] 2025-04-18 07:38:48,605 | INFO     | event service: False
[2025-04-18 03:39:07] 2025-04-18 07:38:48,605 | INFO     | sizes: {0: 2426824, 5: 2427030, 11: 2427086, 5036: 2453262, 5038: 2462203, 5041: 2462259, 5048: 2462557}
[2025-04-18 03:39:07] 2025-04-18 07:38:48,605 | INFO     | --------------------------------------------------
[2025-04-18 03:39:07] 2025-04-18 07:38:48,605 | INFO     | 
[2025-04-18 03:39:07] 2025-04-18 07:38:48,605 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-18 03:39:07] 2025-04-18 07:38:48,630 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-18 03:39:07] 2025-04-18 07:38:48,630 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-18 03:39:07] 2025-04-18 07:38:48,630 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-18 03:39:07] 2025-04-18 07:38:48,630 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-18 03:39:07] 2025-04-18 07:38:48,631 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-18 03:39:07] 2025-04-18 07:38:48,631 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-18 03:39:07] 2025-04-18 07:38:48,631 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-18 03:39:07] 2025-04-18 07:38:48,631 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-18 03:39:07] 2025-04-18 07:38:48,631 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-18 03:39:07] 2025-04-18 07:38:48,631 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-18 03:39:07] 2025-04-18 07:38:48,632 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-18 03:39:07] 2025-04-18 07:38:48,632 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-18 03:39:07] 2025-04-18 07:38:48,632 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-18 03:39:07] 2025-04-18 07:38:48,632 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-18 03:39:07] 2025-04-18 07:38:48,632 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-18 03:39:07] 2025-04-18 07:38:48,632 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-18 03:39:07] 2025-04-18 07:38:48,633 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-18 03:39:07] 2025-04-18 07:38:48,633 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-18 03:39:07] 2025-04-18 07:38:48,633 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-18 03:39:07] 2025-04-18 07:38:48,633 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-18 03:39:07] 2025-04-18 07:38:48,633 | INFO     | job 6603698055 has completed (purged errors)
[2025-04-18 03:39:07] 2025-04-18 07:38:48,634 | INFO     | overall cleanup function is called
[2025-04-18 03:39:07] 2025-04-18 07:38:49,642 | INFO     | --- collectZombieJob: --- 10, [7645]
[2025-04-18 03:39:07] 2025-04-18 07:38:49,642 | INFO     | zombie collector waiting for pid 7645
[2025-04-18 03:39:07] 2025-04-18 07:38:49,643 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-18 03:39:07] 2025-04-18 07:38:49,643 | INFO     | collected zombie processes
[2025-04-18 03:39:07] 2025-04-18 07:38:49,643 | INFO     | will attempt to kill all subprocesses of pid=7645
[2025-04-18 03:39:07] 2025-04-18 07:38:49,735 | INFO     | process IDs to be killed: [7645] (in reverse order)
[2025-04-18 03:39:07] 2025-04-18 07:38:49,787 | WARNING  | found no corresponding commands to process id(s)
[2025-04-18 03:39:07] 2025-04-18 07:38:49,787 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-18 03:39:07] 2025-04-18 07:38:49,791 | INFO     | did not find any defunct processes belonging to 7645
[2025-04-18 03:39:07] 2025-04-18 07:38:49,795 | INFO     | did not find any defunct processes belonging to 7645
[2025-04-18 03:39:07] 2025-04-18 07:38:49,795 | INFO     | ready for new job
[2025-04-18 03:39:07] 2025-04-18 07:38:49,795 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-18 03:39:07] 2025-04-18 07:38:49,797 | INFO     | **************************************
[2025-04-18 03:39:07] 2025-04-18 07:38:49,797 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-18 03:39:07] 2025-04-18 07:38:49,797 | INFO     | **************************************
[2025-04-18 03:39:07] 2025-04-18 07:38:49,797 | INFO     | 
[2025-04-18 03:39:07] 2025-04-18 07:38:49,798 | INFO     | architecture information:
[2025-04-18 03:39:07] 2025-04-18 07:38:49,798 | INFO     | executing command: cat /etc/os-release
[2025-04-18 03:39:07] 2025-04-18 07:38:49,813 | INFO     | cat /etc/os-release:
[2025-04-18 03:39:07] NAME="CentOS Linux"
[2025-04-18 03:39:07] VERSION="7 (Core)"
[2025-04-18 03:39:07] ID="centos"
[2025-04-18 03:39:07] ID_LIKE="rhel fedora"
[2025-04-18 03:39:07] VERSION_ID="7"
[2025-04-18 03:39:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-18 03:39:07] ANSI_COLOR="0;31"
[2025-04-18 03:39:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-18 03:39:07] HOME_URL="https://www.centos.org/"
[2025-04-18 03:39:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-18 03:39:07] 
[2025-04-18 03:39:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-18 03:39:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-18 03:39:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-18 03:39:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-18 03:39:07] 
[2025-04-18 03:39:07] 2025-04-18 07:38:49,813 | INFO     | **************************************
[2025-04-18 03:39:07] 2025-04-18 07:38:50,315 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-18 03:39:07] 2025-04-18 07:38:50,331 | INFO     | sufficient remaining disk space (29386342400 B)
[2025-04-18 03:39:07] 2025-04-18 07:38:50,331 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-18 03:39:07] 2025-04-18 07:38:50,332 | INFO     | current server update state: UPDATING_FINAL
[2025-04-18 03:39:07] 2025-04-18 07:38:50,332 | INFO     | update_server=False
[2025-04-18 03:39:07] 2025-04-18 07:38:50,332 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-18 03:39:07] 2025-04-18 07:38:50,332 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-18 03:39:07] 2025-04-18 07:38:50,333 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-18 03:39:07] 2025-04-18 07:38:50,333 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-18 03:39:07] 2025-04-18 07:38:50,333 | INFO     | found 0 job(s) in 20 queues
[2025-04-18 03:39:07] 2025-04-18 07:38:50,334 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-18 03:39:07] 2025-04-18 07:38:50,334 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-18 03:39:07] 2025-04-18 07:38:50,720 | INFO     | all data control threads have been joined
[2025-04-18 03:39:07] 2025-04-18 07:38:51,257 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-18 03:39:07] 2025-04-18 07:38:51,257 | INFO     | aborting loop
[2025-04-18 03:39:07] 2025-04-18 07:38:51,325 | INFO     | all job control threads have been joined
[2025-04-18 03:39:07] 2025-04-18 07:38:51,334 | INFO     | [job] retrieve thread has finished
[2025-04-18 03:39:07] 2025-04-18 07:38:51,338 | INFO     | [job] queue monitor thread has finished
[2025-04-18 03:39:07] 2025-04-18 07:38:51,463 | INFO     | [payload] execute_payloads thread has finished
[2025-04-18 03:39:07] 2025-04-18 07:38:51,535 | INFO     | [payload] validate_pre thread has finished
[2025-04-18 03:39:07] 2025-04-18 07:38:51,725 | INFO     | [data] control thread has finished
[2025-04-18 03:39:07] 2025-04-18 07:38:51,742 | INFO     | [payload] failed_post thread has finished
[2025-04-18 03:39:07] 2025-04-18 07:38:51,777 | INFO     | all payload control threads have been joined
[2025-04-18 03:39:07] 2025-04-18 07:38:52,000 | INFO     | [data] copytool_in thread has finished
[2025-04-18 03:39:07] 2025-04-18 07:38:52,182 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-18 03:39:07] 2025-04-18 07:38:52,262 | INFO     | [job] job monitor thread has finished
[2025-04-18 03:39:07] 2025-04-18 07:38:52,331 | INFO     | [job] control thread has finished
[2025-04-18 03:39:07] 2025-04-18 07:38:52,339 | INFO     | [data] copytool_out thread has finished
[2025-04-18 03:39:07] 2025-04-18 07:38:52,488 | INFO     | [payload] validate_post thread has finished
[2025-04-18 03:39:07] 2025-04-18 07:38:52,679 | INFO     | [job] validate thread has finished
[2025-04-18 03:39:07] 2025-04-18 07:38:52,749 | INFO     | [job] create_data_payload thread has finished
[2025-04-18 03:39:07] 2025-04-18 07:38:52,779 | INFO     | [payload] control thread has finished
[2025-04-18 03:39:07] 2025-04-18 07:38:56,188 | INFO     | [data] queue_monitor thread has finished
[2025-04-18 03:39:07] 2025-04-18 07:39:00,590 | INFO     | job.realtimelogging is not enabled
[2025-04-18 03:39:07] 2025-04-18 07:39:01,596 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-18 03:39:07] 2025-04-18 07:39:02,184 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139803703936832)>', '<ExcThread(monitor, started 139802385049344)>']
[2025-04-18 03:39:07] 2025-04-18 07:39:02,395 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-18 03:39:07] 2025-04-18 07:39:02,395 | INFO     | [monitor] control thread has ended
[2025-04-18 03:39:07] 2025-04-18 07:39:07,191 | INFO     | all workflow threads have been joined
[2025-04-18 03:39:07] 2025-04-18 07:39:07,197 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-18 03:39:07] 2025-04-18 07:39:07,197 | INFO     | traces error code: 0
[2025-04-18 03:39:07] 2025-04-18 07:39:07,197 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-18 03:39:07] 2025-04-18 07:39:07,315 [wrapper] ==== pilot stdout END ====
[2025-04-18 03:39:07] 2025-04-18 07:39:07,319 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-18 03:39:07] 2025-04-18 07:39:07,322 [wrapper] pilotpid: 1144
[2025-04-18 03:39:07] 2025-04-18 07:39:07,326 [wrapper] Pilot exit status: 0
[2025-04-18 03:39:07] 2025-04-18 07:39:07,341 [wrapper] pandaids: 6603698055
[2025-04-18 03:39:07] 2025-04-18 07:39:07,381 [wrapper] cleanup supervisor_pilot  5009 1145
[2025-04-18 03:39:07] 2025-04-18 07:39:07,385 [wrapper] Test setup, not cleaning
[2025-04-18 03:39:07] 2025-04-18 07:39:07,389 [wrapper] apfmon messages muted
[2025-04-18 03:39:07] 2025-04-18 07:39:07,393 [wrapper] ==== wrapper stdout END ====
[2025-04-18 03:39:07] 2025-04-18 07:39:07,397 [wrapper] ==== wrapper stderr END ====
[2025-04-18 03:39:07]  *** Error codes and diagnostics ***
[2025-04-18 03:39:07]     "exeErrorCode": 0,
[2025-04-18 03:39:07]     "exeErrorDiag": "",
[2025-04-18 03:39:07]     "pilotErrorCode": 0,
[2025-04-18 03:39:07]     "pilotErrorDiag": "",
[2025-04-18 03:39:07]  *** Listing of results directory ***
[2025-04-18 03:39:07] total 420364
[2025-04-18 03:39:07] -rw-r--r-- 1 boincer umatlas    495897 Apr 15 20:26 pilot3.tar.gz
[2025-04-18 03:39:07] -rwx------ 1 boincer umatlas     37140 Apr 15 20:29 runpilot2-wrapper.sh
[2025-04-18 03:39:07] -rw-r--r-- 1 boincer umatlas      5111 Apr 15 20:29 queuedata.json
[2025-04-18 03:39:07] -rw-r--r-- 1 boincer umatlas       100 Apr 18 02:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-18 03:39:07] -rwxr-xr-x 1 boincer umatlas      7986 Apr 18 02:14 run_atlas
[2025-04-18 03:39:07] -rw-r--r-- 1 boincer umatlas       105 Apr 18 02:14 job.xml
[2025-04-18 03:39:07] -rw-r--r-- 2 boincer umatlas 227100514 Apr 18 02:14 EVNT.44075481._001329.pool.root.1
[2025-04-18 03:39:07] -rw-r--r-- 2 boincer umatlas     17569 Apr 18 02:14 start_atlas.sh
[2025-04-18 03:39:07] drwxrwx--x 2 boincer umatlas      4096 Apr 18 02:14 shared
[2025-04-18 03:39:07] -rw-r--r-- 2 boincer umatlas    508891 Apr 18 02:14 input.tar.gz
[2025-04-18 03:39:07] -rw-r--r-- 1 boincer umatlas         0 Apr 18 02:14 boinc_lockfile
[2025-04-18 03:39:07] -rw-r--r-- 1 boincer umatlas      2579 Apr 18 02:14 pandaJob.out
[2025-04-18 03:39:07] -rw------- 1 boincer umatlas       424 Apr 18 02:14 setup.sh.local
[2025-04-18 03:39:07] -rw------- 1 boincer umatlas    990242 Apr 18 02:14 agis_schedconf.cvmfs.json
[2025-04-18 03:39:07] -rw------- 1 boincer umatlas   1618536 Apr 18 02:14 agis_ddmendpoints.agis.ALL.json
[2025-04-18 03:39:07] drwx------ 4 boincer umatlas      4096 Apr 18 02:14 pilot3
[2025-04-18 03:39:07] -rw-r--r-- 1 boincer umatlas      5867 Apr 18 03:27 init_data.xml
[2025-04-18 03:39:07] -rw------- 1 boincer umatlas 197782265 Apr 18 03:38 HITS.44075483._033888.pool.root.1
[2025-04-18 03:39:07] -rw-r--r-- 1 boincer umatlas       529 Apr 18 03:38 boinc_task_state.xml
[2025-04-18 03:39:07] -rw------- 1 boincer umatlas        95 Apr 18 03:38 pilot_heartbeat.json
[2025-04-18 03:39:07] -rw------- 1 boincer umatlas      1050 Apr 18 03:38 memory_monitor_summary.json
[2025-04-18 03:39:07] -rw------- 1 boincer umatlas    375949 Apr 18 03:38 log.44075483._033888.job.log.tgz.1
[2025-04-18 03:39:07] -rw------- 1 boincer umatlas      7754 Apr 18 03:38 heartbeat.json
[2025-04-18 03:39:07] -rw-r--r-- 1 boincer umatlas        27 Apr 18 03:38 wrapper_checkpoint.txt
[2025-04-18 03:39:07] -rw-r--r-- 1 boincer umatlas      8192 Apr 18 03:38 boinc_mmap_file
[2025-04-18 03:39:07] -rw------- 1 boincer umatlas      4548 Apr 18 03:39 pilotlog.txt
[2025-04-18 03:39:07] -rw------- 1 boincer umatlas    478588 Apr 18 03:39 log.44075483._033888.job.log.1
[2025-04-18 03:39:07] -rw------- 1 boincer umatlas       357 Apr 18 03:39 output.list
[2025-04-18 03:39:07] -rw-r--r-- 1 boincer umatlas       620 Apr 18 03:39 runtime_log
[2025-04-18 03:39:07] -rw------- 1 boincer umatlas    870400 Apr 18 03:39 result.tar.gz
[2025-04-18 03:39:07] -rw-r--r-- 1 boincer umatlas     11015 Apr 18 03:39 runtime_log.err
[2025-04-18 03:39:07] -rw------- 1 boincer umatlas       658 Apr 18 03:39 g2fKDmVp5O7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmYCZLDmtwuwVm.diag
[2025-04-18 03:39:07] -rw-r--r-- 1 boincer umatlas     21658 Apr 18 03:39 stderr.txt
[2025-04-18 03:39:07] HITS file was successfully produced:
[2025-04-18 03:39:07] -rw------- 1 boincer umatlas 197782265 Apr 18 03:38 shared/HITS.pool.root.1
[2025-04-18 03:39:07]  *** Contents of shared directory: ***
[2025-04-18 03:39:07] total 416308
[2025-04-18 03:39:07] -rw-r--r-- 2 boincer umatlas 227100514 Apr 18 02:14 ATLAS.root_0
[2025-04-18 03:39:07] -rw-r--r-- 2 boincer umatlas     17569 Apr 18 02:14 start_atlas.sh
[2025-04-18 03:39:07] -rw-r--r-- 2 boincer umatlas    508891 Apr 18 02:14 input.tar.gz
[2025-04-18 03:39:07] -rw------- 1 boincer umatlas 197782265 Apr 18 03:38 HITS.pool.root.1
[2025-04-18 03:39:07] -rw------- 1 boincer umatlas    870400 Apr 18 03:39 result.tar.gz
03:39:09 (29979): run_atlas exited; CPU time 48107.437949
03:39:09 (29979): called boinc_finish(0)

</stderr_txt>
]]>

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