Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
01:45:44 (13977): wrapper (7.7.26015): starting
01:45:44 (13977): wrapper: running run_atlas (--nthreads 12)
[2025-04-18 01:45:44] Arguments: --nthreads 12
[2025-04-18 01:45:44] Threads: 12
[2025-04-18 01:45:44] Checking for CVMFS
[2025-04-18 01:45:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-18 01:45:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-18 01:45:44] Running cvmfs_config stat atlas.cern.ch
[2025-04-18 01:45:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-18 01:45:44] 2.11.2.0 28060 385216 170392 144991 3 56 20025477 20275201 1 130560 0 22497441 99.969 7320621 53708 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-18 01:45:44] CVMFS is ok
[2025-04-18 01:45:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-18 01:45:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-18 01:45:44] Further information can be found at the LHC@home message board.
[2025-04-18 01:45:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-18 01:45:44] Checking for apptainer binary...
[2025-04-18 01:45:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-18 01:45:44] Running /usr/bin/apptainer --version
[2025-04-18 01:45:44] apptainer version 1.3.2-1.el7
[2025-04-18 01:45:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-18 01:45:46] c-205-23.aglt2.org
[2025-04-18 01:45:46] apptainer works
[2025-04-18 01:45:46] Set ATHENA_PROC_NUMBER=12
[2025-04-18 01:45:46] Set ATHENA_CORE_NUMBER=12
[2025-04-18 01:45:46] Starting ATLAS job with PandaID=6606056028
[2025-04-18 01:45:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-18 03:08:40]  *** The last 200 lines of the pilot log: ***
[2025-04-18 03:08:40]  is_tar=False
[2025-04-18 03:08:40]  lfn=log.44075483._063215.job.log.tgz.1
[2025-04-18 03:08:40]  mtime=0
[2025-04-18 03:08:40]  protocol_id=None
[2025-04-18 03:08:40]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-18 03:08:40]  replicas=None
[2025-04-18 03:08:40]  scope=mc23_13p6TeV
[2025-04-18 03:08:40]  status=None
[2025-04-18 03:08:40]  status_code=0
[2025-04-18 03:08:40]  storage_token=
[2025-04-18 03:08:40]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6606056028/log.44075483._063215.job.log.tgz.1
[2025-04-18 03:08:40]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/64/58/log.44075483._063215.job.log.tgz.1
[2025-04-18 03:08:40]  workdir=None
[2025-04-18 03:08:40] ]
[2025-04-18 03:08:40] 2025-04-18 07:08:16,240 | INFO     | transferring file log.44075483._063215.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6606056028/log.44075483._063215.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-04-18 03:08:40] 2025-04-18 07:08:16,241 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6606056028/log.44075483._063215.job.log.tgz.1 /tmp/boinchome/slots/0/log.44075483._063215.job
[2025-04-18 03:08:40] 2025-04-18 07:08:16,262 | INFO     | adding to output.list: log.44075483._063215.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/64/58/log.44075483._063215.job.log.tg
[2025-04-18 03:08:40] 2025-04-18 07:08:16,263 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-18 03:08:40] 2025-04-18 07:08:16,263 | INFO     | summary of transferred files:
[2025-04-18 03:08:40] 2025-04-18 07:08:16,263 | INFO     |  -- lfn=log.44075483._063215.job.log.tgz.1, status_code=0, status=transferred
[2025-04-18 03:08:40] 2025-04-18 07:08:16,264 | INFO     | stage-out finished correctly
[2025-04-18 03:08:40] 2025-04-18 07:08:18,679 | INFO     | monitor loop #369: job 0:6606056028 is in state 'finished'
[2025-04-18 03:08:40] 2025-04-18 07:08:18,679 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-18 03:08:40] 2025-04-18 07:08:19,389 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-18 03:08:40] 2025-04-18 07:08:21,188 | INFO     | monitor loop #370: job 0:6606056028 is in state 'finished'
[2025-04-18 03:08:40] 2025-04-18 07:08:21,189 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-18 03:08:40] 2025-04-18 07:08:22,350 | INFO     | job 6606056028 has state=finished
[2025-04-18 03:08:40] 2025-04-18 07:08:22,350 | INFO     | preparing for final server update for job 6606056028 in state='finished'
[2025-04-18 03:08:40] 2025-04-18 07:08:22,350 | INFO     | this job has now completed (state=finished)
[2025-04-18 03:08:40] 2025-04-18 07:08:22,351 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-18 03:08:40] 2025-04-18 07:08:22,351 | INFO     | log transfer has been attempted: DONE
[2025-04-18 03:08:40] 2025-04-18 07:08:22,351 | INFO     | job 6606056028 has finished - writing final server update
[2025-04-18 03:08:40] 2025-04-18 07:08:22,351 | INFO     | total number of processed events: 400 (read)
[2025-04-18 03:08:40] 2025-04-18 07:08:22,353 | INFO     | executing command: lscpu
[2025-04-18 03:08:40] 2025-04-18 07:08:22,383 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-18 03:08:40] 2025-04-18 07:08:23,692 | INFO     | monitor loop #371: job 0:6606056028 is in state 'finished'
[2025-04-18 03:08:40] 2025-04-18 07:08:23,699 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-18 03:08:40] 2025-04-18 07:08:24,877 | INFO     | PID=17595 has CPU usage=6.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-04-18 03:08:40] 2025-04-18 07:08:26,202 | INFO     | monitor loop #372: job 0:6606056028 is in state 'finished'
[2025-04-18 03:08:40] 2025-04-18 07:08:26,202 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-18 03:08:40] 2025-04-18 07:08:27,121 | INFO     | CPU arch script returned: x86-64-v2
[2025-04-18 03:08:40] 2025-04-18 07:08:27,122 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6606056028/memory_monitor_summary.json (trf name=prmon)
[2025-04-18 03:08:40] 2025-04-18 07:08:27,123 | INFO     | extracted standard info from prmon json
[2025-04-18 03:08:40] 2025-04-18 07:08:27,123 | INFO     | extracted standard memory fields from prmon json
[2025-04-18 03:08:40] 2025-04-18 07:08:27,123 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-18 03:08:40] 2025-04-18 07:08:27,123 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-18 03:08:40] 2025-04-18 07:08:27,124 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-18 03:08:40] 2025-04-18 07:08:27,126 | INFO     | fitting pss+swap vs Time
[2025-04-18 03:08:40] 2025-04-18 07:08:27,126 | INFO     | sum of square deviations: 125630262.5
[2025-04-18 03:08:40] 2025-04-18 07:08:27,127 | INFO     | sum of deviations: 21727904058.5
[2025-04-18 03:08:40] 2025-04-18 07:08:27,127 | INFO     | mean x: 1744957720.5
[2025-04-18 03:08:40] 2025-04-18 07:08:27,127 | INFO     | mean y: 2536832.527027027
[2025-04-18 03:08:40] 2025-04-18 07:08:27,128 | INFO     | -- intersect: -301789986582.4651
[2025-04-18 03:08:40] 2025-04-18 07:08:27,128 | INFO     | intersect: -301789986582.4651
[2025-04-18 03:08:40] 2025-04-18 07:08:27,128 | INFO     | chi2: 1.8539103395044456
[2025-04-18 03:08:40] 2025-04-18 07:08:27,128 | INFO     | -- intersect: -301789986582.4651
[2025-04-18 03:08:40] 2025-04-18 07:08:27,128 | INFO     | current memory leak: 172.95 B/s (using 74 data points, chi2=1.85)
[2025-04-18 03:08:40] 2025-04-18 07:08:27,128 | INFO     | ..............................
[2025-04-18 03:08:40] 2025-04-18 07:08:27,129 | INFO     | . Timing measurements:
[2025-04-18 03:08:40] 2025-04-18 07:08:27,129 | INFO     | . get job = 0 s
[2025-04-18 03:08:40] 2025-04-18 07:08:27,129 | INFO     | . initial setup = 2 s
[2025-04-18 03:08:40] 2025-04-18 07:08:27,129 | INFO     | . payload setup = 7 s
[2025-04-18 03:08:40] 2025-04-18 07:08:27,129 | INFO     | . stage-in = 0 s
[2025-04-18 03:08:40] 2025-04-18 07:08:27,129 | INFO     | . payload execution = 4907 s
[2025-04-18 03:08:40] 2025-04-18 07:08:27,129 | INFO     | . stage-out = 0 s
[2025-04-18 03:08:40] 2025-04-18 07:08:27,129 | INFO     | . log creation = 0 s
[2025-04-18 03:08:40] 2025-04-18 07:08:27,129 | INFO     | ..............................
[2025-04-18 03:08:40] 2025-04-18 07:08:27,710 | INFO     | 
[2025-04-18 03:08:40] 2025-04-18 07:08:27,710 | INFO     | job summary report
[2025-04-18 03:08:40] 2025-04-18 07:08:27,710 | INFO     | --------------------------------------------------
[2025-04-18 03:08:40] 2025-04-18 07:08:27,710 | INFO     | PanDA job id: 6606056028
[2025-04-18 03:08:40] 2025-04-18 07:08:27,710 | INFO     | task id: 44075483
[2025-04-18 03:08:40] 2025-04-18 07:08:27,710 | INFO     | errors: (none)
[2025-04-18 03:08:40] 2025-04-18 07:08:27,711 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-18 03:08:40] 2025-04-18 07:08:27,711 | INFO     | pilot state: finished 
[2025-04-18 03:08:40] 2025-04-18 07:08:27,711 | INFO     | transexitcode: 0
[2025-04-18 03:08:40] 2025-04-18 07:08:27,711 | INFO     | exeerrorcode: 0
[2025-04-18 03:08:40] 2025-04-18 07:08:27,711 | INFO     | exeerrordiag: 
[2025-04-18 03:08:40] 2025-04-18 07:08:27,711 | INFO     | exitcode: 0
[2025-04-18 03:08:40] 2025-04-18 07:08:27,712 | INFO     | exitmsg: OK
[2025-04-18 03:08:40] 2025-04-18 07:08:27,712 | INFO     | cpuconsumptiontime: 47284 s
[2025-04-18 03:08:40] 2025-04-18 07:08:27,712 | INFO     | nevents: 400
[2025-04-18 03:08:40] 2025-04-18 07:08:27,712 | INFO     | neventsw: 0
[2025-04-18 03:08:40] 2025-04-18 07:08:27,712 | INFO     | pid: 24102
[2025-04-18 03:08:40] 2025-04-18 07:08:27,712 | INFO     | pgrp: 24102
[2025-04-18 03:08:40] 2025-04-18 07:08:27,713 | INFO     | corecount: 12
[2025-04-18 03:08:40] 2025-04-18 07:08:27,713 | INFO     | event service: False
[2025-04-18 03:08:40] 2025-04-18 07:08:27,713 | INFO     | sizes: {0: 2426773, 5: 2426979, 11: 2427035, 4918: 2453156, 4920: 2462097, 4924: 2462153, 4931: 2462451}
[2025-04-18 03:08:40] 2025-04-18 07:08:27,713 | INFO     | --------------------------------------------------
[2025-04-18 03:08:40] 2025-04-18 07:08:27,713 | INFO     | 
[2025-04-18 03:08:40] 2025-04-18 07:08:27,713 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-18 03:08:40] 2025-04-18 07:08:27,737 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-18 03:08:40] 2025-04-18 07:08:27,737 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-18 03:08:40] 2025-04-18 07:08:27,737 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-18 03:08:40] 2025-04-18 07:08:27,737 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-18 03:08:40] 2025-04-18 07:08:27,738 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-18 03:08:40] 2025-04-18 07:08:27,738 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-18 03:08:40] 2025-04-18 07:08:27,738 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-18 03:08:40] 2025-04-18 07:08:27,738 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-18 03:08:40] 2025-04-18 07:08:27,738 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-18 03:08:40] 2025-04-18 07:08:27,738 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-18 03:08:40] 2025-04-18 07:08:27,739 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-18 03:08:40] 2025-04-18 07:08:27,739 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-18 03:08:40] 2025-04-18 07:08:27,739 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-18 03:08:40] 2025-04-18 07:08:27,739 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-18 03:08:40] 2025-04-18 07:08:27,739 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-18 03:08:40] 2025-04-18 07:08:27,739 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-18 03:08:40] 2025-04-18 07:08:27,740 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-18 03:08:40] 2025-04-18 07:08:27,740 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-18 03:08:40] 2025-04-18 07:08:27,740 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-18 03:08:40] 2025-04-18 07:08:27,740 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-18 03:08:40] 2025-04-18 07:08:27,740 | INFO     | job 6606056028 has completed (purged errors)
[2025-04-18 03:08:40] 2025-04-18 07:08:27,740 | INFO     | overall cleanup function is called
[2025-04-18 03:08:40] 2025-04-18 07:08:28,749 | INFO     | --- collectZombieJob: --- 10, [24102]
[2025-04-18 03:08:40] 2025-04-18 07:08:28,749 | INFO     | zombie collector waiting for pid 24102
[2025-04-18 03:08:40] 2025-04-18 07:08:28,757 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-18 03:08:40] 2025-04-18 07:08:28,757 | INFO     | collected zombie processes
[2025-04-18 03:08:40] 2025-04-18 07:08:28,758 | INFO     | will attempt to kill all subprocesses of pid=24102
[2025-04-18 03:08:40] 2025-04-18 07:08:28,848 | INFO     | process IDs to be killed: [24102] (in reverse order)
[2025-04-18 03:08:40] 2025-04-18 07:08:28,900 | WARNING  | found no corresponding commands to process id(s)
[2025-04-18 03:08:40] 2025-04-18 07:08:28,901 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-18 03:08:40] 2025-04-18 07:08:28,904 | INFO     | did not find any defunct processes belonging to 24102
[2025-04-18 03:08:40] 2025-04-18 07:08:28,907 | INFO     | did not find any defunct processes belonging to 24102
[2025-04-18 03:08:40] 2025-04-18 07:08:28,907 | INFO     | ready for new job
[2025-04-18 03:08:40] 2025-04-18 07:08:28,907 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-18 03:08:40] 2025-04-18 07:08:28,908 | INFO     | **************************************
[2025-04-18 03:08:40] 2025-04-18 07:08:28,908 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-18 03:08:40] 2025-04-18 07:08:28,908 | INFO     | **************************************
[2025-04-18 03:08:40] 2025-04-18 07:08:28,909 | INFO     | 
[2025-04-18 03:08:40] 2025-04-18 07:08:28,909 | INFO     | architecture information:
[2025-04-18 03:08:40] 2025-04-18 07:08:28,910 | INFO     | executing command: cat /etc/os-release
[2025-04-18 03:08:40] 2025-04-18 07:08:28,924 | INFO     | cat /etc/os-release:
[2025-04-18 03:08:40] NAME="CentOS Linux"
[2025-04-18 03:08:40] VERSION="7 (Core)"
[2025-04-18 03:08:40] ID="centos"
[2025-04-18 03:08:40] ID_LIKE="rhel fedora"
[2025-04-18 03:08:40] VERSION_ID="7"
[2025-04-18 03:08:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-18 03:08:40] ANSI_COLOR="0;31"
[2025-04-18 03:08:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-18 03:08:40] HOME_URL="https://www.centos.org/"
[2025-04-18 03:08:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-18 03:08:40] 
[2025-04-18 03:08:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-18 03:08:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-18 03:08:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-18 03:08:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-18 03:08:40] 
[2025-04-18 03:08:40] 2025-04-18 07:08:28,924 | INFO     | **************************************
[2025-04-18 03:08:40] 2025-04-18 07:08:29,427 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-18 03:08:40] 2025-04-18 07:08:29,443 | INFO     | sufficient remaining disk space (29385293824 B)
[2025-04-18 03:08:40] 2025-04-18 07:08:29,443 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-18 03:08:40] 2025-04-18 07:08:29,444 | INFO     | current server update state: UPDATING_FINAL
[2025-04-18 03:08:40] 2025-04-18 07:08:29,444 | INFO     | update_server=False
[2025-04-18 03:08:40] 2025-04-18 07:08:29,444 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-18 03:08:40] 2025-04-18 07:08:29,444 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-18 03:08:40] 2025-04-18 07:08:29,444 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-18 03:08:40] 2025-04-18 07:08:29,445 | INFO     | found 0 job(s) in 20 queues
[2025-04-18 03:08:40] 2025-04-18 07:08:29,445 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-18 03:08:40] 2025-04-18 07:08:29,445 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-18 03:08:40] 2025-04-18 07:08:29,628 | INFO     | all data control threads have been joined
[2025-04-18 03:08:40] 2025-04-18 07:08:29,715 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-18 03:08:40] 2025-04-18 07:08:29,716 | INFO     | aborting loop
[2025-04-18 03:08:40] 2025-04-18 07:08:29,980 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-18 03:08:40] 2025-04-18 07:08:30,239 | INFO     | all payload control threads have been joined
[2025-04-18 03:08:40] 2025-04-18 07:08:30,449 | INFO     | [job] retrieve thread has finished
[2025-04-18 03:08:40] 2025-04-18 07:08:30,596 | INFO     | all job control threads have been joined
[2025-04-18 03:08:40] 2025-04-18 07:08:30,634 | INFO     | [data] control thread has finished
[2025-04-18 03:08:40] 2025-04-18 07:08:30,721 | INFO     | [job] job monitor thread has finished
[2025-04-18 03:08:40] 2025-04-18 07:08:30,744 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-18 03:08:40] 2025-04-18 07:08:30,806 | INFO     | [job] create_data_payload thread has finished
[2025-04-18 03:08:40] 2025-04-18 07:08:30,865 | INFO     | [payload] validate_pre thread has finished
[2025-04-18 03:08:40] 2025-04-18 07:08:31,032 | INFO     | [data] copytool_in thread has finished
[2025-04-18 03:08:40] 2025-04-18 07:08:31,230 | INFO     | [payload] validate_post thread has finished
[2025-04-18 03:08:40] 2025-04-18 07:08:31,244 | INFO     | [payload] control thread has finished
[2025-04-18 03:08:40] 2025-04-18 07:08:31,313 | INFO     | [payload] failed_post thread has finished
[2025-04-18 03:08:40] 2025-04-18 07:08:31,450 | INFO     | [data] copytool_out thread has finished
[2025-04-18 03:08:40] 2025-04-18 07:08:31,592 | INFO     | [job] validate thread has finished
[2025-04-18 03:08:40] 2025-04-18 07:08:31,602 | INFO     | [job] control thread has finished
[2025-04-18 03:08:40] 2025-04-18 07:08:31,620 | INFO     | [payload] execute_payloads thread has finished
[2025-04-18 03:08:40] 2025-04-18 07:08:32,224 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-18 03:08:40] 2025-04-18 07:08:33,230 | INFO     | [job] queue monitor thread has finished
[2025-04-18 03:08:40] 2025-04-18 07:08:33,986 | INFO     | [data] queue_monitor thread has finished
[2025-04-18 03:08:40] 2025-04-18 07:08:34,722 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140541735364416)>', '<ExcThread(monitor, started 140541287180032)>']
[2025-04-18 03:08:40] 2025-04-18 07:08:35,476 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-18 03:08:40] 2025-04-18 07:08:35,476 | INFO     | [monitor] control thread has ended
[2025-04-18 03:08:40] 2025-04-18 07:08:39,749 | INFO     | all workflow threads have been joined
[2025-04-18 03:08:40] 2025-04-18 07:08:39,750 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-18 03:08:40] 2025-04-18 07:08:39,750 | INFO     | traces error code: 0
[2025-04-18 03:08:40] 2025-04-18 07:08:39,751 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-18 03:08:40] 2025-04-18 07:08:39,841 [wrapper] ==== pilot stdout END ====
[2025-04-18 03:08:40] 2025-04-18 07:08:39,844 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-18 03:08:40] 2025-04-18 07:08:39,848 [wrapper] pilotpid: 17595
[2025-04-18 03:08:40] 2025-04-18 07:08:39,852 [wrapper] Pilot exit status: 0
[2025-04-18 03:08:40] 2025-04-18 07:08:39,866 [wrapper] pandaids: 6606056028
[2025-04-18 03:08:40] 2025-04-18 07:08:39,906 [wrapper] cleanup supervisor_pilot  7018 17596
[2025-04-18 03:08:40] 2025-04-18 07:08:39,910 [wrapper] Test setup, not cleaning
[2025-04-18 03:08:40] 2025-04-18 07:08:39,914 [wrapper] apfmon messages muted
[2025-04-18 03:08:40] 2025-04-18 07:08:39,918 [wrapper] ==== wrapper stdout END ====
[2025-04-18 03:08:40] 2025-04-18 07:08:39,922 [wrapper] ==== wrapper stderr END ====
[2025-04-18 03:08:40]  *** Error codes and diagnostics ***
[2025-04-18 03:08:40]     "exeErrorCode": 0,
[2025-04-18 03:08:40]     "exeErrorDiag": "",
[2025-04-18 03:08:40]     "pilotErrorCode": 0,
[2025-04-18 03:08:40]     "pilotErrorDiag": "",
[2025-04-18 03:08:40]  *** Listing of results directory ***
[2025-04-18 03:08:40] total 421792
[2025-04-18 03:08:40] -rw-r--r-- 1 boincer umatlas    495897 Apr 17 22:29 pilot3.tar.gz
[2025-04-18 03:08:40] -rwx------ 1 boincer umatlas     37140 Apr 17 22:31 runpilot2-wrapper.sh
[2025-04-18 03:08:40] -rw-r--r-- 1 boincer umatlas      5111 Apr 17 22:31 queuedata.json
[2025-04-18 03:08:40] -rw-r--r-- 1 boincer umatlas       100 Apr 18 01:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-18 03:08:40] -rwxr-xr-x 1 boincer umatlas      7986 Apr 18 01:45 run_atlas
[2025-04-18 03:08:40] -rw-r--r-- 1 boincer umatlas       105 Apr 18 01:45 job.xml
[2025-04-18 03:08:40] -rw-r--r-- 2 boincer umatlas 226977516 Apr 18 01:45 EVNT.44075481._002457.pool.root.1
[2025-04-18 03:08:40] -rw-r--r-- 2 boincer umatlas     17569 Apr 18 01:45 start_atlas.sh
[2025-04-18 03:08:40] drwxrwx--x 2 boincer umatlas      4096 Apr 18 01:45 shared
[2025-04-18 03:08:40] -rw-r--r-- 2 boincer umatlas    508883 Apr 18 01:45 input.tar.gz
[2025-04-18 03:08:40] -rw-r--r-- 1 boincer umatlas         0 Apr 18 01:45 boinc_lockfile
[2025-04-18 03:08:40] -rw-r--r-- 1 boincer umatlas      2578 Apr 18 01:45 pandaJob.out
[2025-04-18 03:08:40] -rw------- 1 boincer umatlas       424 Apr 18 01:45 setup.sh.local
[2025-04-18 03:08:40] -rw------- 1 boincer umatlas    990242 Apr 18 01:45 agis_schedconf.cvmfs.json
[2025-04-18 03:08:40] -rw------- 1 boincer umatlas   1618536 Apr 18 01:45 agis_ddmendpoints.agis.ALL.json
[2025-04-18 03:08:40] drwx------ 4 boincer umatlas      4096 Apr 18 01:45 pilot3
[2025-04-18 03:08:40] -rw-r--r-- 1 boincer umatlas      5868 Apr 18 03:02 init_data.xml
[2025-04-18 03:08:40] -rw------- 1 boincer umatlas 199402448 Apr 18 03:07 HITS.44075483._063215.pool.root.1
[2025-04-18 03:08:40] -rw-r--r-- 1 boincer umatlas       529 Apr 18 03:07 boinc_task_state.xml
[2025-04-18 03:08:40] -rw------- 1 boincer umatlas        95 Apr 18 03:08 pilot_heartbeat.json
[2025-04-18 03:08:40] -rw------- 1 boincer umatlas      1049 Apr 18 03:08 memory_monitor_summary.json
[2025-04-18 03:08:40] -rw------- 1 boincer umatlas    366563 Apr 18 03:08 log.44075483._063215.job.log.tgz.1
[2025-04-18 03:08:40] -rw------- 1 boincer umatlas      7750 Apr 18 03:08 heartbeat.json
[2025-04-18 03:08:40] -rw-r--r-- 1 boincer umatlas        27 Apr 18 03:08 wrapper_checkpoint.txt
[2025-04-18 03:08:40] -rw-r--r-- 1 boincer umatlas      8192 Apr 18 03:08 boinc_mmap_file
[2025-04-18 03:08:40] -rw------- 1 boincer umatlas      4476 Apr 18 03:08 pilotlog.txt
[2025-04-18 03:08:40] -rw------- 1 boincer umatlas    470269 Apr 18 03:08 log.44075483._063215.job.log.1
[2025-04-18 03:08:40] -rw------- 1 boincer umatlas       357 Apr 18 03:08 output.list
[2025-04-18 03:08:40] -rw-r--r-- 1 boincer umatlas       620 Apr 18 03:08 runtime_log
[2025-04-18 03:08:40] -rw------- 1 boincer umatlas    860160 Apr 18 03:08 result.tar.gz
[2025-04-18 03:08:40] -rw------- 1 boincer umatlas       658 Apr 18 03:08 MTaMDmwgqP7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmRDeLDm0C9pUo.diag
[2025-04-18 03:08:40] -rw-r--r-- 1 boincer umatlas     11015 Apr 18 03:08 runtime_log.err
[2025-04-18 03:08:40] -rw-r--r-- 1 boincer umatlas     21602 Apr 18 03:08 stderr.txt
[2025-04-18 03:08:40] HITS file was successfully produced:
[2025-04-18 03:08:40] -rw------- 1 boincer umatlas 199402448 Apr 18 03:07 shared/HITS.pool.root.1
[2025-04-18 03:08:40]  *** Contents of shared directory: ***
[2025-04-18 03:08:40] total 417752
[2025-04-18 03:08:40] -rw-r--r-- 2 boincer umatlas 226977516 Apr 18 01:45 ATLAS.root_0
[2025-04-18 03:08:40] -rw-r--r-- 2 boincer umatlas     17569 Apr 18 01:45 start_atlas.sh
[2025-04-18 03:08:40] -rw-r--r-- 2 boincer umatlas    508883 Apr 18 01:45 input.tar.gz
[2025-04-18 03:08:40] -rw------- 1 boincer umatlas 199402448 Apr 18 03:07 HITS.pool.root.1
[2025-04-18 03:08:40] -rw------- 1 boincer umatlas    860160 Apr 18 03:08 result.tar.gz
03:08:41 (13977): run_atlas exited; CPU time 47259.059080
03:08:41 (13977): called boinc_finish(0)

</stderr_txt>
]]>

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