Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
17:01:44 (147269): wrapper (7.7.26015): starting
17:01:44 (147269): wrapper: running run_atlas (--nthreads 5)
[2025-04-18 17:01:44] Arguments: --nthreads 5
[2025-04-18 17:01:44] Threads: 5
[2025-04-18 17:01:44] Checking for CVMFS
[2025-04-18 17:01:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-18 17:01:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-18 17:01:45] Running cvmfs_config stat atlas.cern.ch
[2025-04-18 17:01:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-18 17:01:45] 2.12.7.0 3950 522 47476 144993 1 56 2211889 4096000 0 130560 0 355007 99.988 154908 7295 http://s1swinburne-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-04-18 17:01:45] CVMFS is ok
[2025-04-18 17:01:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-18 17:01:45] Small home clusters do not require a local http proxy but it is suggested if
[2025-04-18 17:01:45] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-04-18 17:01:45] Further information can be found at the LHC@home message board.
[2025-04-18 17:01:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-18 17:01:45] Checking for apptainer binary...
[2025-04-18 17:01:45] apptainer is not installed, using version from CVMFS
[2025-04-18 17:01:45] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-18 17:01:46] BoincUbuntu
[2025-04-18 17:01:46] apptainer works
[2025-04-18 17:01:46] Set ATHENA_PROC_NUMBER=5
[2025-04-18 17:01:46] Set ATHENA_CORE_NUMBER=5
[2025-04-18 17:01:46] Starting ATLAS job with PandaID=6605944181
[2025-04-18 17:01:46] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-18 18:38:04]  *** The last 200 lines of the pilot log: ***
[2025-04-18 18:38:04]  status=None
[2025-04-18 18:38:04]  status_code=0
[2025-04-18 18:38:04]  storage_token=
[2025-04-18 18:38:04]  surl=/var/lib/boinc/slots/0/PanDA_Pilot-6605944181/log.44075483._061011.job.log.tgz.1
[2025-04-18 18:38:04]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fe/74/log.44075483._061011.job.log.tgz.1
[2025-04-18 18:38:04]  workdir=None
[2025-04-18 18:38:04] ]
[2025-04-18 18:38:04] 2025-04-18 08:37:32,800 | INFO     | transferring file log.44075483._061011.job.log.tgz.1 from /var/lib/boinc/slots/0/PanDA_Pilot-6605944181/log.44075483._061011.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-04-18 18:38:04] 2025-04-18 08:37:32,800 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-6605944181/log.44075483._061011.job.log.tgz.1 /var/lib/boinc/slots/0/log.44075483._061011.job
[2025-04-18 18:38:04] 2025-04-18 08:37:32,831 | INFO     | adding to output.list: log.44075483._061011.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fe/74/log.44075483._061011.job.log.tg
[2025-04-18 18:38:04] 2025-04-18 08:37:32,832 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-18 18:38:04] 2025-04-18 08:37:32,832 | INFO     | summary of transferred files:
[2025-04-18 18:38:04] 2025-04-18 08:37:32,832 | INFO     |  -- lfn=log.44075483._061011.job.log.tgz.1, status_code=0, status=transferred
[2025-04-18 18:38:04] 2025-04-18 08:37:32,833 | INFO     | stage-out finished correctly
[2025-04-18 18:38:04] 2025-04-18 08:37:32,906 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-18 18:38:04] 2025-04-18 08:37:33,149 | INFO     | job 6605944181 has state=finished
[2025-04-18 18:38:04] 2025-04-18 08:37:33,149 | INFO     | preparing for final server update for job 6605944181 in state='finished'
[2025-04-18 18:38:04] 2025-04-18 08:37:33,149 | INFO     | this job has now completed (state=finished)
[2025-04-18 18:38:04] 2025-04-18 08:37:33,149 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-18 18:38:04] 2025-04-18 08:37:33,150 | INFO     | log transfer has been attempted: DONE
[2025-04-18 18:38:04] 2025-04-18 08:37:33,150 | INFO     | job 6605944181 has finished - writing final server update
[2025-04-18 18:38:04] 2025-04-18 08:37:33,150 | INFO     | total number of processed events: 400 (read)
[2025-04-18 18:38:04] 2025-04-18 08:37:33,153 | INFO     | executing command: lscpu
[2025-04-18 18:38:04] 2025-04-18 08:37:33,188 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-18 18:38:04] 2025-04-18 08:37:34,938 | INFO     | monitor loop #127: job 0:6605944181 is in state 'finished'
[2025-04-18 18:38:04] 2025-04-18 08:37:34,938 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-18 18:38:04] 2025-04-18 08:37:37,446 | INFO     | monitor loop #128: job 0:6605944181 is in state 'finished'
[2025-04-18 18:38:04] 2025-04-18 08:37:37,446 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-18 18:38:04] 2025-04-18 08:37:38,588 | INFO     | PID=150897 has CPU usage=5.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-04-18 18:38:04] 2025-04-18 08:37:39,951 | INFO     | monitor loop #129: job 0:6605944181 is in state 'finished'
[2025-04-18 18:38:04] 2025-04-18 08:37:39,952 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-18 18:38:04] 2025-04-18 08:37:42,455 | INFO     | monitor loop #130: job 0:6605944181 is in state 'finished'
[2025-04-18 18:38:04] 2025-04-18 08:37:42,456 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-18 18:38:04] 2025-04-18 08:37:44,959 | INFO     | monitor loop #131: job 0:6605944181 is in state 'finished'
[2025-04-18 18:38:04] 2025-04-18 08:37:44,960 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-18 18:38:04] 2025-04-18 08:37:47,461 | INFO     | monitor loop #132: job 0:6605944181 is in state 'finished'
[2025-04-18 18:38:04] 2025-04-18 08:37:47,462 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-18 18:38:04] 2025-04-18 08:37:49,966 | INFO     | monitor loop #133: job 0:6605944181 is in state 'finished'
[2025-04-18 18:38:04] 2025-04-18 08:37:49,966 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-18 18:38:04] 2025-04-18 08:37:51,337 | INFO     | CPU arch script returned: x86-64-v2
[2025-04-18 18:38:04] 2025-04-18 08:37:51,338 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6605944181/memory_monitor_summary.json (trf name=prmon)
[2025-04-18 18:38:04] 2025-04-18 08:37:51,339 | INFO     | extracted standard info from prmon json
[2025-04-18 18:38:04] 2025-04-18 08:37:51,339 | INFO     | extracted standard memory fields from prmon json
[2025-04-18 18:38:04] 2025-04-18 08:37:51,339 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-18 18:38:04] 2025-04-18 08:37:51,339 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-18 18:38:04] 2025-04-18 08:37:51,339 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-18 18:38:04] 2025-04-18 08:37:51,341 | INFO     | fitting pss+swap vs Time
[2025-04-18 18:38:04] 2025-04-18 08:37:51,341 | INFO     | sum of square deviations: 155859188.7164176
[2025-04-18 18:38:04] 2025-04-18 08:37:51,341 | INFO     | sum of deviations: 23004780608.641792
[2025-04-18 18:38:04] 2025-04-18 08:37:51,341 | INFO     | mean x: 1744962525.477612
[2025-04-18 18:38:04] 2025-04-18 08:37:51,341 | INFO     | mean y: 2347782.76119403
[2025-04-18 18:38:04] 2025-04-18 08:37:51,341 | INFO     | -- intersect: -257553721894.6727
[2025-04-18 18:38:04] 2025-04-18 08:37:51,341 | INFO     | intersect: -257553721894.6727
[2025-04-18 18:38:04] 2025-04-18 08:37:51,341 | INFO     | chi2: 1.733975227082368
[2025-04-18 18:38:04] 2025-04-18 08:37:51,341 | INFO     | -- intersect: -257553721894.6727
[2025-04-18 18:38:04] 2025-04-18 08:37:51,341 | INFO     | current memory leak: 147.60 B/s (using 67 data points, chi2=1.73)
[2025-04-18 18:38:04] 2025-04-18 08:37:51,342 | INFO     | ..............................
[2025-04-18 18:38:04] 2025-04-18 08:37:51,342 | INFO     | . Timing measurements:
[2025-04-18 18:38:04] 2025-04-18 08:37:51,342 | INFO     | . get job = 0 s
[2025-04-18 18:38:04] 2025-04-18 08:37:51,342 | INFO     | . initial setup = 5 s
[2025-04-18 18:38:04] 2025-04-18 08:37:51,342 | INFO     | . payload setup = 12 s
[2025-04-18 18:38:04] 2025-04-18 08:37:51,342 | INFO     | . stage-in = 0 s
[2025-04-18 18:38:04] 2025-04-18 08:37:51,342 | INFO     | . payload execution = 5687 s
[2025-04-18 18:38:04] 2025-04-18 08:37:51,342 | INFO     | . stage-out = 0 s
[2025-04-18 18:38:04] 2025-04-18 08:37:51,342 | INFO     | . log creation = 0 s
[2025-04-18 18:38:04] 2025-04-18 08:37:51,342 | INFO     | ..............................
[2025-04-18 18:38:04] 2025-04-18 08:37:51,407 | INFO     | 
[2025-04-18 18:38:04] 2025-04-18 08:37:51,407 | INFO     | job summary report
[2025-04-18 18:38:04] 2025-04-18 08:37:51,407 | INFO     | --------------------------------------------------
[2025-04-18 18:38:04] 2025-04-18 08:37:51,408 | INFO     | PanDA job id: 6605944181
[2025-04-18 18:38:04] 2025-04-18 08:37:51,408 | INFO     | task id: 44075483
[2025-04-18 18:38:04] 2025-04-18 08:37:51,408 | INFO     | errors: (none)
[2025-04-18 18:38:04] 2025-04-18 08:37:51,408 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-18 18:38:04] 2025-04-18 08:37:51,408 | INFO     | pilot state: finished 
[2025-04-18 18:38:04] 2025-04-18 08:37:51,408 | INFO     | transexitcode: 0
[2025-04-18 18:38:04] 2025-04-18 08:37:51,408 | INFO     | exeerrorcode: 0
[2025-04-18 18:38:04] 2025-04-18 08:37:51,408 | INFO     | exeerrordiag: 
[2025-04-18 18:38:04] 2025-04-18 08:37:51,408 | INFO     | exitcode: 0
[2025-04-18 18:38:04] 2025-04-18 08:37:51,408 | INFO     | exitmsg: OK
[2025-04-18 18:38:04] 2025-04-18 08:37:51,408 | INFO     | cpuconsumptiontime: 22946 s
[2025-04-18 18:38:04] 2025-04-18 08:37:51,408 | INFO     | nevents: 400
[2025-04-18 18:38:04] 2025-04-18 08:37:51,408 | INFO     | neventsw: 0
[2025-04-18 18:38:04] 2025-04-18 08:37:51,408 | INFO     | pid: 157317
[2025-04-18 18:38:04] 2025-04-18 08:37:51,408 | INFO     | pgrp: 157317
[2025-04-18 18:38:04] 2025-04-18 08:37:51,408 | INFO     | corecount: 5
[2025-04-18 18:38:04] 2025-04-18 08:37:51,408 | INFO     | event service: False
[2025-04-18 18:38:04] 2025-04-18 08:37:51,408 | INFO     | sizes: {0: 2426801, 8: 2427007, 11: 2427035, 5703: 2452404, 5705: 2461401, 5723: 2461515}
[2025-04-18 18:38:04] 2025-04-18 08:37:51,408 | INFO     | --------------------------------------------------
[2025-04-18 18:38:04] 2025-04-18 08:37:51,408 | INFO     | 
[2025-04-18 18:38:04] 2025-04-18 08:37:51,409 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-04-18 18:38:04] 2025-04-18 08:37:51,476 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-18 18:38:04] 2025-04-18 08:37:51,476 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-18 18:38:04] 2025-04-18 08:37:51,477 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-18 18:38:04] 2025-04-18 08:37:51,477 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-18 18:38:04] 2025-04-18 08:37:51,477 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-18 18:38:04] 2025-04-18 08:37:51,477 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-18 18:38:04] 2025-04-18 08:37:51,477 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-18 18:38:04] 2025-04-18 08:37:51,477 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-18 18:38:04] 2025-04-18 08:37:51,477 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-18 18:38:04] 2025-04-18 08:37:51,478 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-18 18:38:04] 2025-04-18 08:37:51,478 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-18 18:38:04] 2025-04-18 08:37:51,478 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-18 18:38:04] 2025-04-18 08:37:51,478 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-18 18:38:04] 2025-04-18 08:37:51,478 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-18 18:38:04] 2025-04-18 08:37:51,478 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-18 18:38:04] 2025-04-18 08:37:51,478 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-18 18:38:04] 2025-04-18 08:37:51,478 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-18 18:38:04] 2025-04-18 08:37:51,478 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-18 18:38:04] 2025-04-18 08:37:51,479 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-18 18:38:04] 2025-04-18 08:37:51,479 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-18 18:38:04] 2025-04-18 08:37:51,479 | INFO     | job 6605944181 has completed (purged errors)
[2025-04-18 18:38:04] 2025-04-18 08:37:51,479 | INFO     | overall cleanup function is called
[2025-04-18 18:38:04] 2025-04-18 08:37:52,488 | INFO     | --- collectZombieJob: --- 10, [157317]
[2025-04-18 18:38:04] 2025-04-18 08:37:52,488 | INFO     | zombie collector waiting for pid 157317
[2025-04-18 18:38:04] 2025-04-18 08:37:52,488 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-18 18:38:04] 2025-04-18 08:37:52,488 | INFO     | collected zombie processes
[2025-04-18 18:38:04] 2025-04-18 08:37:52,488 | INFO     | will attempt to kill all subprocesses of pid=157317
[2025-04-18 18:38:04] 2025-04-18 08:37:52,586 | INFO     | process IDs to be killed: [157317] (in reverse order)
[2025-04-18 18:38:04] 2025-04-18 08:37:52,684 | WARNING  | found no corresponding commands to process id(s)
[2025-04-18 18:38:04] 2025-04-18 08:37:52,684 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-18 18:38:04] 2025-04-18 08:37:52,686 | INFO     | did not find any defunct processes belonging to 157317
[2025-04-18 18:38:04] 2025-04-18 08:37:52,687 | INFO     | did not find any defunct processes belonging to 157317
[2025-04-18 18:38:04] 2025-04-18 08:37:52,687 | INFO     | ready for new job
[2025-04-18 18:38:04] 2025-04-18 08:37:52,687 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-18 18:38:04] 2025-04-18 08:37:52,688 | INFO     | **************************************
[2025-04-18 18:38:04] 2025-04-18 08:37:52,688 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-18 18:38:04] 2025-04-18 08:37:52,688 | INFO     | **************************************
[2025-04-18 18:38:04] 2025-04-18 08:37:52,688 | INFO     | 
[2025-04-18 18:38:04] 2025-04-18 08:37:52,689 | INFO     | pilot is running in a VM
[2025-04-18 18:38:04] 2025-04-18 08:37:52,689 | INFO     | architecture information:
[2025-04-18 18:38:04] 2025-04-18 08:37:52,690 | INFO     | executing command: cat /etc/os-release
[2025-04-18 18:38:04] 2025-04-18 08:37:52,715 | INFO     | cat /etc/os-release:
[2025-04-18 18:38:04] NAME="CentOS Linux"
[2025-04-18 18:38:04] VERSION="7 (Core)"
[2025-04-18 18:38:04] ID="centos"
[2025-04-18 18:38:04] ID_LIKE="rhel fedora"
[2025-04-18 18:38:04] VERSION_ID="7"
[2025-04-18 18:38:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-18 18:38:04] ANSI_COLOR="0;31"
[2025-04-18 18:38:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-18 18:38:04] HOME_URL="https://www.centos.org/"
[2025-04-18 18:38:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-18 18:38:04] 
[2025-04-18 18:38:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-18 18:38:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-18 18:38:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-18 18:38:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-18 18:38:04] 
[2025-04-18 18:38:04] 2025-04-18 08:37:52,715 | INFO     | **************************************
[2025-04-18 18:38:04] 2025-04-18 08:37:53,218 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-04-18 18:38:04] 2025-04-18 08:37:53,251 | INFO     | sufficient remaining disk space (91682242560 B)
[2025-04-18 18:38:04] 2025-04-18 08:37:53,251 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-18 18:38:04] 2025-04-18 08:37:53,252 | INFO     | current server update state: UPDATING_FINAL
[2025-04-18 18:38:04] 2025-04-18 08:37:53,252 | INFO     | update_server=False
[2025-04-18 18:38:04] 2025-04-18 08:37:53,252 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-18 18:38:04] 2025-04-18 08:37:53,253 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-18 18:38:04] 2025-04-18 08:37:53,253 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-18 18:38:04] 2025-04-18 08:37:53,254 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-18 18:38:04] 2025-04-18 08:37:53,254 | INFO     | found 0 job(s) in 20 queues
[2025-04-18 18:38:04] 2025-04-18 08:37:53,254 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-18 18:38:04] 2025-04-18 08:37:53,254 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-18 18:38:04] 2025-04-18 08:37:53,405 | INFO     | all job control threads have been joined
[2025-04-18 18:38:04] 2025-04-18 08:37:53,439 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-18 18:38:04] 2025-04-18 08:37:53,475 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-18 18:38:04] 2025-04-18 08:37:53,476 | INFO     | aborting loop
[2025-04-18 18:38:04] 2025-04-18 08:37:53,544 | INFO     | all payload control threads have been joined
[2025-04-18 18:38:04] 2025-04-18 08:37:53,908 | INFO     | all data control threads have been joined
[2025-04-18 18:38:04] 2025-04-18 08:37:54,257 | INFO     | [job] retrieve thread has finished
[2025-04-18 18:38:04] 2025-04-18 08:37:54,259 | INFO     | [job] queue monitor thread has finished
[2025-04-18 18:38:04] 2025-04-18 08:37:54,412 | INFO     | [job] control thread has finished
[2025-04-18 18:38:04] 2025-04-18 08:37:54,481 | INFO     | [job] job monitor thread has finished
[2025-04-18 18:38:04] 2025-04-18 08:37:54,549 | INFO     | [payload] control thread has finished
[2025-04-18 18:38:04] 2025-04-18 08:37:54,691 | INFO     | [data] copytool_in thread has finished
[2025-04-18 18:38:04] 2025-04-18 08:37:54,692 | INFO     | [job] validate thread has finished
[2025-04-18 18:38:04] 2025-04-18 08:37:54,700 | INFO     | [payload] validate_pre thread has finished
[2025-04-18 18:38:04] 2025-04-18 08:37:54,810 | INFO     | [job] create_data_payload thread has finished
[2025-04-18 18:38:04] 2025-04-18 08:37:54,914 | INFO     | [data] control thread has finished
[2025-04-18 18:38:04] 2025-04-18 08:37:55,105 | INFO     | [payload] validate_post thread has finished
[2025-04-18 18:38:04] 2025-04-18 08:37:55,119 | INFO     | [payload] execute_payloads thread has finished
[2025-04-18 18:38:04] 2025-04-18 08:37:55,446 | INFO     | [data] copytool_out thread has finished
[2025-04-18 18:38:04] 2025-04-18 08:37:55,489 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-18 18:38:04] 2025-04-18 08:37:55,676 | INFO     | [payload] failed_post thread has finished
[2025-04-18 18:38:04] 2025-04-18 08:37:57,259 | INFO     | [data] queue_monitor thread has finished
[2025-04-18 18:38:04] 2025-04-18 08:37:58,763 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 133436797720384)>', '<ExcThread(monitor, started 133436043949824)>']
[2025-04-18 18:38:04] 2025-04-18 08:37:59,286 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-18 18:38:04] 2025-04-18 08:37:59,287 | INFO     | [monitor] control thread has ended
[2025-04-18 18:38:04] 2025-04-18 08:38:03,789 | INFO     | all workflow threads have been joined
[2025-04-18 18:38:04] 2025-04-18 08:38:03,790 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-18 18:38:04] 2025-04-18 08:38:03,790 | INFO     | traces error code: 0
[2025-04-18 18:38:04] 2025-04-18 08:38:03,791 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-18 18:38:04] 2025-04-18 08:38:03,894 [wrapper] ==== pilot stdout END ====
[2025-04-18 18:38:04] 2025-04-18 08:38:03,901 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-18 18:38:04] 2025-04-18 08:38:03,907 [wrapper] pilotpid: 150897
[2025-04-18 18:38:04] 2025-04-18 08:38:03,913 [wrapper] Pilot exit status: 0
[2025-04-18 18:38:04] 2025-04-18 08:38:03,939 [wrapper] pandaids: 6605944181
[2025-04-18 18:38:04] 2025-04-18 08:38:04,016 [wrapper] cleanup supervisor_pilot  172673 150898
[2025-04-18 18:38:04] 2025-04-18 08:38:04,021 [wrapper] Test setup, not cleaning
[2025-04-18 18:38:04] 2025-04-18 08:38:04,027 [wrapper] apfmon messages muted
[2025-04-18 18:38:04] 2025-04-18 08:38:04,033 [wrapper] ==== wrapper stdout END ====
[2025-04-18 18:38:04] 2025-04-18 08:38:04,039 [wrapper] ==== wrapper stderr END ====
[2025-04-18 18:38:04]  *** Error codes and diagnostics ***
[2025-04-18 18:38:04]     "exeErrorCode": 0,
[2025-04-18 18:38:04]     "exeErrorDiag": "",
[2025-04-18 18:38:04]     "pilotErrorCode": 0,
[2025-04-18 18:38:04]     "pilotErrorDiag": "",
[2025-04-18 18:38:04]  *** Listing of results directory ***
[2025-04-18 18:38:04] total 408788
[2025-04-18 18:38:04] -rw-r--r-- 1 boinc boinc    495897 Apr 18 07:56 pilot3.tar.gz
[2025-04-18 18:38:04] -rw-r--r-- 1 boinc boinc      5111 Apr 18 08:00 queuedata.json
[2025-04-18 18:38:04] -rwx------ 1 boinc boinc     37140 Apr 18 08:00 runpilot2-wrapper.sh
[2025-04-18 18:38:04] -rw-r--r-- 1 boinc boinc       100 Apr 18 17:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-18 18:38:04] -rwxr-xr-x 1 boinc boinc      7986 Apr 18 17:01 run_atlas
[2025-04-18 18:38:04] -rw-r--r-- 1 boinc boinc       105 Apr 18 17:01 job.xml
[2025-04-18 18:38:04] -rw-r--r-- 1 boinc boinc      6256 Apr 18 17:01 init_data.xml
[2025-04-18 18:38:04] -rw-r--r-- 2 boinc boinc 221386862 Apr 18 17:01 EVNT.44075481._001229.pool.root.1
[2025-04-18 18:38:04] -rw-r--r-- 2 boinc boinc     17569 Apr 18 17:01 start_atlas.sh
[2025-04-18 18:38:04] drwxrwx--x 2 boinc boinc      4096 Apr 18 17:01 shared
[2025-04-18 18:38:04] -rw-r--r-- 2 boinc boinc    508896 Apr 18 17:01 input.tar.gz
[2025-04-18 18:38:04] -rw-r--r-- 1 boinc boinc         0 Apr 18 17:01 boinc_lockfile
[2025-04-18 18:38:04] -rw-r--r-- 1 boinc boinc      2578 Apr 18 17:01 pandaJob.out
[2025-04-18 18:38:04] -rw------- 1 boinc boinc       424 Apr 18 17:01 setup.sh.local
[2025-04-18 18:38:04] -rw------- 1 boinc boinc    990242 Apr 18 17:02 agis_schedconf.cvmfs.json
[2025-04-18 18:38:04] -rw------- 1 boinc boinc   1618536 Apr 18 17:02 agis_ddmendpoints.agis.ALL.json
[2025-04-18 18:38:04] drwx------ 4 boinc boinc      4096 Apr 18 17:02 pilot3
[2025-04-18 18:38:04] -rw------- 1 boinc boinc        96 Apr 18 18:36 pilot_heartbeat.json
[2025-04-18 18:38:04] -rw-r--r-- 1 boinc boinc       529 Apr 18 18:37 boinc_task_state.xml
[2025-04-18 18:38:04] -rw------- 1 boinc boinc 192378146 Apr 18 18:37 HITS.44075483._061011.pool.root.1
[2025-04-18 18:38:04] -rw------- 1 boinc boinc      1014 Apr 18 18:37 memory_monitor_summary.json
[2025-04-18 18:38:04] -rw------- 1 boinc boinc    242330 Apr 18 18:37 log.44075483._061011.job.log.tgz.1
[2025-04-18 18:38:04] -rw-r--r-- 1 boinc boinc      8192 Apr 18 18:37 boinc_mmap_file
[2025-04-18 18:38:04] -rw------- 1 boinc boinc      7653 Apr 18 18:37 heartbeat.json
[2025-04-18 18:38:04] -rw-r--r-- 1 boinc boinc        27 Apr 18 18:37 wrapper_checkpoint.txt
[2025-04-18 18:38:04] -rw------- 1 boinc boinc      4538 Apr 18 18:38 pilotlog.txt
[2025-04-18 18:38:04] -rw------- 1 boinc boinc    241551 Apr 18 18:38 log.44075483._061011.job.log.1
[2025-04-18 18:38:04] -rw------- 1 boinc boinc       357 Apr 18 18:38 output.list
[2025-04-18 18:38:04] -rw-r--r-- 1 boinc boinc       620 Apr 18 18:38 runtime_log
[2025-04-18 18:38:04] -rw------- 1 boinc boinc    501760 Apr 18 18:38 result.tar.gz
[2025-04-18 18:38:04] -rw-r--r-- 1 boinc boinc     10993 Apr 18 18:38 runtime_log.err
[2025-04-18 18:38:04] -rw------- 1 boinc boinc       648 Apr 18 18:38 J3dLDmrSmP7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmPpdLDmjGQEwm.diag
[2025-04-18 18:38:04] -rw-r--r-- 1 boinc boinc     22145 Apr 18 18:38 stderr.txt
[2025-04-18 18:38:04] HITS file was successfully produced:
[2025-04-18 18:38:04] -rw------- 1 boinc boinc 192378146 Apr 18 18:37 shared/HITS.pool.root.1
[2025-04-18 18:38:04]  *** Contents of shared directory: ***
[2025-04-18 18:38:04] total 405092
[2025-04-18 18:38:04] -rw-r--r-- 2 boinc boinc 221386862 Apr 18 17:01 ATLAS.root_0
[2025-04-18 18:38:04] -rw-r--r-- 2 boinc boinc     17569 Apr 18 17:01 start_atlas.sh
[2025-04-18 18:38:04] -rw-r--r-- 2 boinc boinc    508896 Apr 18 17:01 input.tar.gz
[2025-04-18 18:38:04] -rw------- 1 boinc boinc 192378146 Apr 18 18:37 HITS.pool.root.1
[2025-04-18 18:38:04] -rw------- 1 boinc boinc    501760 Apr 18 18:38 result.tar.gz
18:38:05 (147269): run_atlas exited; CPU time 21403.153591
18:38:05 (147269): called boinc_finish(0)

</stderr_txt>
]]>

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