Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
08:08:07 (32356): wrapper (7.7.26015): starting
08:08:07 (32356): wrapper: running run_atlas (--nthreads 5)
[2025-04-19 08:08:07] Arguments: --nthreads 5
[2025-04-19 08:08:07] Threads: 5
[2025-04-19 08:08:07] Checking for CVMFS
[2025-04-19 08:08:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-19 08:08:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-19 08:08:07] Running cvmfs_config stat atlas.cern.ch
[2025-04-19 08:08:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-19 08:08:08] 2.12.7.0 3239 103 45488 145016 2 56 2538442 4096000 0 130560 0 70966 99.964 142990 11334 http://s1swinburne-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-04-19 08:08:08] CVMFS is ok
[2025-04-19 08:08:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-19 08:08:08] Small home clusters do not require a local http proxy but it is suggested if
[2025-04-19 08:08:08] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-04-19 08:08:08] Further information can be found at the LHC@home message board.
[2025-04-19 08:08:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-19 08:08:08] Checking for apptainer binary...
[2025-04-19 08:08:08] apptainer is not installed, using version from CVMFS
[2025-04-19 08:08:08] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-19 08:08:08] BoincUbuntu
[2025-04-19 08:08:08] apptainer works
[2025-04-19 08:08:08] Set ATHENA_PROC_NUMBER=5
[2025-04-19 08:08:08] Set ATHENA_CORE_NUMBER=5
[2025-04-19 08:08:08] Starting ATLAS job with PandaID=6606055670
[2025-04-19 08:08:08] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-19 09:52:01]  *** The last 200 lines of the pilot log: ***
[2025-04-19 09:52:01]  mtime=0
[2025-04-19 09:52:01]  protocol_id=None
[2025-04-19 09:52:01]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-19 09:52:01]  replicas=None
[2025-04-19 09:52:01]  scope=mc23_13p6TeV
[2025-04-19 09:52:01]  status=None
[2025-04-19 09:52:01]  status_code=0
[2025-04-19 09:52:01]  storage_token=
[2025-04-19 09:52:01]  surl=/var/lib/boinc/slots/0/PanDA_Pilot-6606055670/log.44075483._062915.job.log.tgz.1
[2025-04-19 09:52:01]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/51/d6/log.44075483._062915.job.log.tgz.1
[2025-04-19 09:52:01]  workdir=None
[2025-04-19 09:52:01] ]
[2025-04-19 09:52:01] 2025-04-18 23:51:34,721 | INFO     | transferring file log.44075483._062915.job.log.tgz.1 from /var/lib/boinc/slots/0/PanDA_Pilot-6606055670/log.44075483._062915.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-04-19 09:52:01] 2025-04-18 23:51:34,721 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-6606055670/log.44075483._062915.job.log.tgz.1 /var/lib/boinc/slots/0/log.44075483._062915.job
[2025-04-19 09:52:01] 2025-04-18 23:51:34,755 | INFO     | adding to output.list: log.44075483._062915.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/51/d6/log.44075483._062915.job.log.tg
[2025-04-19 09:52:01] 2025-04-18 23:51:34,756 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-19 09:52:01] 2025-04-18 23:51:34,756 | INFO     | summary of transferred files:
[2025-04-19 09:52:01] 2025-04-18 23:51:34,756 | INFO     |  -- lfn=log.44075483._062915.job.log.tgz.1, status_code=0, status=transferred
[2025-04-19 09:52:01] 2025-04-18 23:51:34,756 | INFO     | stage-out finished correctly
[2025-04-19 09:52:01] 2025-04-18 23:51:36,314 | WARNING  | process 42401 can no longer be monitored (due to stat problems) - aborting
[2025-04-19 09:52:01] 2025-04-18 23:51:36,314 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6606055670/memory_monitor_summary.json (trf name=prmon)
[2025-04-19 09:52:01] 2025-04-18 23:51:36,385 | INFO     | number of running child processes to parent process 42401: 1
[2025-04-19 09:52:01] 2025-04-18 23:51:36,385 | INFO     | maximum number of monitored processes: 6
[2025-04-19 09:52:01] 2025-04-18 23:51:36,542 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-19 09:52:01] 2025-04-18 23:51:38,039 | INFO     | job 6606055670 has state=finished
[2025-04-19 09:52:01] 2025-04-18 23:51:38,039 | INFO     | preparing for final server update for job 6606055670 in state='finished'
[2025-04-19 09:52:01] 2025-04-18 23:51:38,040 | INFO     | this job has now completed (state=finished)
[2025-04-19 09:52:01] 2025-04-18 23:51:38,040 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-19 09:52:01] 2025-04-18 23:51:38,040 | INFO     | log transfer has been attempted: DONE
[2025-04-19 09:52:01] 2025-04-18 23:51:38,040 | INFO     | job 6606055670 has finished - writing final server update
[2025-04-19 09:52:01] 2025-04-18 23:51:38,041 | INFO     | total number of processed events: 400 (read)
[2025-04-19 09:52:01] 2025-04-18 23:51:38,052 | INFO     | executing command: lscpu
[2025-04-19 09:52:01] 2025-04-18 23:51:38,144 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-19 09:52:01] 2025-04-18 23:51:38,888 | INFO     | monitor loop #133: job 0:6606055670 is in state 'finished'
[2025-04-19 09:52:01] 2025-04-18 23:51:38,889 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 09:52:01] 2025-04-18 23:51:41,392 | INFO     | monitor loop #134: job 0:6606055670 is in state 'finished'
[2025-04-19 09:52:01] 2025-04-18 23:51:41,392 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 09:52:01] 2025-04-18 23:51:43,895 | INFO     | monitor loop #135: job 0:6606055670 is in state 'finished'
[2025-04-19 09:52:01] 2025-04-18 23:51:43,896 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 09:52:01] 2025-04-18 23:51:46,199 | INFO     | CPU arch script returned: x86-64-v2
[2025-04-19 09:52:01] 2025-04-18 23:51:46,199 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6606055670/memory_monitor_summary.json (trf name=prmon)
[2025-04-19 09:52:01] 2025-04-18 23:51:46,201 | INFO     | extracted standard info from prmon json
[2025-04-19 09:52:01] 2025-04-18 23:51:46,201 | INFO     | extracted standard memory fields from prmon json
[2025-04-19 09:52:01] 2025-04-18 23:51:46,201 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-19 09:52:01] 2025-04-18 23:51:46,202 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-19 09:52:01] 2025-04-18 23:51:46,202 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-19 09:52:01] 2025-04-18 23:51:46,204 | INFO     | fitting pss+swap vs Time
[2025-04-19 09:52:01] 2025-04-18 23:51:46,204 | INFO     | sum of square deviations: 208886871.4794525
[2025-04-19 09:52:01] 2025-04-18 23:51:46,205 | INFO     | sum of deviations: 29460248587.041103
[2025-04-19 09:52:01] 2025-04-18 23:51:46,205 | INFO     | mean x: 1745017189.3972602
[2025-04-19 09:52:01] 2025-04-18 23:51:46,205 | INFO     | mean y: 2327841.205479452
[2025-04-19 09:52:01] 2025-04-18 23:51:46,205 | INFO     | -- intersect: -246105241410.029
[2025-04-19 09:52:01] 2025-04-18 23:51:46,205 | INFO     | intersect: -246105241410.029
[2025-04-19 09:52:01] 2025-04-18 23:51:46,205 | INFO     | chi2: 2.569472901081202
[2025-04-19 09:52:01] 2025-04-18 23:51:46,206 | INFO     | -- intersect: -246105241410.029
[2025-04-19 09:52:01] 2025-04-18 23:51:46,206 | INFO     | current memory leak: 141.03 B/s (using 73 data points, chi2=2.57)
[2025-04-19 09:52:01] 2025-04-18 23:51:46,206 | INFO     | ..............................
[2025-04-19 09:52:01] 2025-04-18 23:51:46,207 | INFO     | . Timing measurements:
[2025-04-19 09:52:01] 2025-04-18 23:51:46,207 | INFO     | . get job = 0 s
[2025-04-19 09:52:01] 2025-04-18 23:51:46,207 | INFO     | . initial setup = 5 s
[2025-04-19 09:52:01] 2025-04-18 23:51:46,207 | INFO     | . payload setup = 13 s
[2025-04-19 09:52:01] 2025-04-18 23:51:46,207 | INFO     | . stage-in = 0 s
[2025-04-19 09:52:01] 2025-04-18 23:51:46,208 | INFO     | . payload execution = 6144 s
[2025-04-19 09:52:01] 2025-04-18 23:51:46,208 | INFO     | . stage-out = 0 s
[2025-04-19 09:52:01] 2025-04-18 23:51:46,208 | INFO     | . log creation = 0 s
[2025-04-19 09:52:01] 2025-04-18 23:51:46,208 | INFO     | ..............................
[2025-04-19 09:52:01] 2025-04-18 23:51:46,288 | INFO     | 
[2025-04-19 09:52:01] 2025-04-18 23:51:46,288 | INFO     | job summary report
[2025-04-19 09:52:01] 2025-04-18 23:51:46,288 | INFO     | --------------------------------------------------
[2025-04-19 09:52:01] 2025-04-18 23:51:46,288 | INFO     | PanDA job id: 6606055670
[2025-04-19 09:52:01] 2025-04-18 23:51:46,288 | INFO     | task id: 44075483
[2025-04-19 09:52:01] 2025-04-18 23:51:46,288 | INFO     | errors: (none)
[2025-04-19 09:52:01] 2025-04-18 23:51:46,288 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-19 09:52:01] 2025-04-18 23:51:46,288 | INFO     | pilot state: finished 
[2025-04-19 09:52:01] 2025-04-18 23:51:46,289 | INFO     | transexitcode: 0
[2025-04-19 09:52:01] 2025-04-18 23:51:46,289 | INFO     | exeerrorcode: 0
[2025-04-19 09:52:01] 2025-04-18 23:51:46,289 | INFO     | exeerrordiag: 
[2025-04-19 09:52:01] 2025-04-18 23:51:46,289 | INFO     | exitcode: 0
[2025-04-19 09:52:01] 2025-04-18 23:51:46,289 | INFO     | exitmsg: OK
[2025-04-19 09:52:01] 2025-04-18 23:51:46,289 | INFO     | cpuconsumptiontime: 25232 s
[2025-04-19 09:52:01] 2025-04-18 23:51:46,289 | INFO     | nevents: 400
[2025-04-19 09:52:01] 2025-04-18 23:51:46,289 | INFO     | neventsw: 0
[2025-04-19 09:52:01] 2025-04-18 23:51:46,289 | INFO     | pid: 42401
[2025-04-19 09:52:01] 2025-04-18 23:51:46,289 | INFO     | pgrp: 42401
[2025-04-19 09:52:01] 2025-04-18 23:51:46,289 | INFO     | corecount: 5
[2025-04-19 09:52:01] 2025-04-18 23:51:46,289 | INFO     | event service: False
[2025-04-19 09:52:01] 2025-04-18 23:51:46,289 | INFO     | sizes: {0: 2426801, 10: 2427007, 11: 2427035, 6161: 2452424, 6162: 2452423, 6163: 2461420, 6165: 2461604, 6174: 2461774}
[2025-04-19 09:52:01] 2025-04-18 23:51:46,289 | INFO     | --------------------------------------------------
[2025-04-19 09:52:01] 2025-04-18 23:51:46,289 | INFO     | 
[2025-04-19 09:52:01] 2025-04-18 23:51:46,290 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-04-19 09:52:01] 2025-04-18 23:51:46,342 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-19 09:52:01] 2025-04-18 23:51:46,343 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-19 09:52:01] 2025-04-18 23:51:46,343 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-19 09:52:01] 2025-04-18 23:51:46,343 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-19 09:52:01] 2025-04-18 23:51:46,344 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-19 09:52:01] 2025-04-18 23:51:46,344 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-19 09:52:01] 2025-04-18 23:51:46,344 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-19 09:52:01] 2025-04-18 23:51:46,345 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-19 09:52:01] 2025-04-18 23:51:46,345 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-19 09:52:01] 2025-04-18 23:51:46,345 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-19 09:52:01] 2025-04-18 23:51:46,346 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-19 09:52:01] 2025-04-18 23:51:46,346 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-19 09:52:01] 2025-04-18 23:51:46,346 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-19 09:52:01] 2025-04-18 23:51:46,347 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-19 09:52:01] 2025-04-18 23:51:46,347 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-19 09:52:01] 2025-04-18 23:51:46,348 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-19 09:52:01] 2025-04-18 23:51:46,348 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-19 09:52:01] 2025-04-18 23:51:46,348 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-19 09:52:01] 2025-04-18 23:51:46,348 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-19 09:52:01] 2025-04-18 23:51:46,348 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-19 09:52:01] 2025-04-18 23:51:46,349 | INFO     | job 6606055670 has completed (purged errors)
[2025-04-19 09:52:01] 2025-04-18 23:51:46,349 | INFO     | overall cleanup function is called
[2025-04-19 09:52:01] 2025-04-18 23:51:46,384 | INFO     | PID=35984 has CPU usage=5.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-04-19 09:52:01] 2025-04-18 23:51:47,363 | INFO     | --- collectZombieJob: --- 10, [42401]
[2025-04-19 09:52:01] 2025-04-18 23:51:47,363 | INFO     | zombie collector waiting for pid 42401
[2025-04-19 09:52:01] 2025-04-18 23:51:47,364 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-19 09:52:01] 2025-04-18 23:51:47,364 | INFO     | collected zombie processes
[2025-04-19 09:52:01] 2025-04-18 23:51:47,364 | INFO     | will attempt to kill all subprocesses of pid=42401
[2025-04-19 09:52:01] 2025-04-18 23:51:47,441 | INFO     | process IDs to be killed: [42401] (in reverse order)
[2025-04-19 09:52:01] 2025-04-18 23:51:47,553 | WARNING  | found no corresponding commands to process id(s)
[2025-04-19 09:52:01] 2025-04-18 23:51:47,554 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-19 09:52:01] 2025-04-18 23:51:47,556 | INFO     | did not find any defunct processes belonging to 42401
[2025-04-19 09:52:01] 2025-04-18 23:51:47,557 | INFO     | did not find any defunct processes belonging to 42401
[2025-04-19 09:52:01] 2025-04-18 23:51:47,558 | INFO     | ready for new job
[2025-04-19 09:52:01] 2025-04-18 23:51:47,558 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-19 09:52:01] 2025-04-18 23:51:47,559 | INFO     | **************************************
[2025-04-19 09:52:01] 2025-04-18 23:51:47,559 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-19 09:52:01] 2025-04-18 23:51:47,559 | INFO     | **************************************
[2025-04-19 09:52:01] 2025-04-18 23:51:47,559 | INFO     | 
[2025-04-19 09:52:01] 2025-04-18 23:51:47,560 | INFO     | pilot is running in a VM
[2025-04-19 09:52:01] 2025-04-18 23:51:47,560 | INFO     | architecture information:
[2025-04-19 09:52:01] 2025-04-18 23:51:47,561 | INFO     | executing command: cat /etc/os-release
[2025-04-19 09:52:01] 2025-04-18 23:51:47,588 | INFO     | cat /etc/os-release:
[2025-04-19 09:52:01] NAME="CentOS Linux"
[2025-04-19 09:52:01] VERSION="7 (Core)"
[2025-04-19 09:52:01] ID="centos"
[2025-04-19 09:52:01] ID_LIKE="rhel fedora"
[2025-04-19 09:52:01] VERSION_ID="7"
[2025-04-19 09:52:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-19 09:52:01] ANSI_COLOR="0;31"
[2025-04-19 09:52:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-19 09:52:01] HOME_URL="https://www.centos.org/"
[2025-04-19 09:52:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-19 09:52:01] 
[2025-04-19 09:52:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-19 09:52:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-19 09:52:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-19 09:52:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-19 09:52:01] 
[2025-04-19 09:52:01] 2025-04-18 23:51:47,588 | INFO     | **************************************
[2025-04-19 09:52:01] 2025-04-18 23:51:48,091 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-04-19 09:52:01] 2025-04-18 23:51:48,127 | INFO     | sufficient remaining disk space (91716845568 B)
[2025-04-19 09:52:01] 2025-04-18 23:51:48,128 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-19 09:52:01] 2025-04-18 23:51:48,128 | INFO     | current server update state: UPDATING_FINAL
[2025-04-19 09:52:01] 2025-04-18 23:51:48,128 | INFO     | update_server=False
[2025-04-19 09:52:01] 2025-04-18 23:51:48,128 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-19 09:52:01] 2025-04-18 23:51:48,129 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-19 09:52:01] 2025-04-18 23:51:48,129 | INFO     | aborting loop
[2025-04-19 09:52:01] 2025-04-18 23:51:48,129 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-19 09:52:01] 2025-04-18 23:51:48,130 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-19 09:52:01] 2025-04-18 23:51:48,387 | INFO     | found 0 job(s) in 20 queues
[2025-04-19 09:52:01] 2025-04-18 23:51:48,388 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-19 09:52:01] 2025-04-18 23:51:48,388 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-19 09:52:01] 2025-04-18 23:51:48,388 | INFO     | all payload control threads have been joined
[2025-04-19 09:52:01] 2025-04-18 23:51:49,091 | INFO     | all data control threads have been joined
[2025-04-19 09:52:01] 2025-04-18 23:51:49,133 | INFO     | [job] retrieve thread has finished
[2025-04-19 09:52:01] 2025-04-18 23:51:49,134 | INFO     | [job] job monitor thread has finished
[2025-04-19 09:52:01] 2025-04-18 23:51:49,134 | INFO     | [job] queue monitor thread has finished
[2025-04-19 09:52:01] 2025-04-18 23:51:49,381 | INFO     | [payload] execute_payloads thread has finished
[2025-04-19 09:52:01] 2025-04-18 23:51:49,391 | INFO     | [payload] control thread has finished
[2025-04-19 09:52:01] 2025-04-18 23:51:49,450 | INFO     | all job control threads have been joined
[2025-04-19 09:52:01] 2025-04-18 23:51:49,628 | INFO     | [job] validate thread has finished
[2025-04-19 09:52:01] 2025-04-18 23:51:49,628 | INFO     | [data] copytool_in thread has finished
[2025-04-19 09:52:01] 2025-04-18 23:51:49,629 | INFO     | [payload] validate_pre thread has finished
[2025-04-19 09:52:01] 2025-04-18 23:51:49,633 | INFO     | [job] create_data_payload thread has finished
[2025-04-19 09:52:01] 2025-04-18 23:51:49,804 | INFO     | [payload] failed_post thread has finished
[2025-04-19 09:52:01] 2025-04-18 23:51:50,100 | INFO     | [data] control thread has finished
[2025-04-19 09:52:01] 2025-04-18 23:51:50,135 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-19 09:52:01] 2025-04-18 23:51:50,136 | INFO     | [data] copytool_out thread has finished
[2025-04-19 09:52:01] 2025-04-18 23:51:50,455 | INFO     | [job] control thread has finished
[2025-04-19 09:52:01] 2025-04-18 23:51:50,467 | INFO     | [payload] validate_post thread has finished
[2025-04-19 09:52:01] 2025-04-18 23:51:51,621 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-19 09:52:01] 2025-04-18 23:51:55,627 | INFO     | [data] queue_monitor thread has finished
[2025-04-19 09:52:01] 2025-04-18 23:51:55,913 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 126148049717056)>', '<ExcThread(monitor, started 126147643811584)>']
[2025-04-19 09:52:01] 2025-04-18 23:51:56,426 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-19 09:52:01] 2025-04-18 23:51:56,426 | INFO     | [monitor] control thread has ended
[2025-04-19 09:52:01] 2025-04-18 23:52:00,938 | INFO     | all workflow threads have been joined
[2025-04-19 09:52:01] 2025-04-18 23:52:00,939 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-19 09:52:01] 2025-04-18 23:52:00,939 | INFO     | traces error code: 0
[2025-04-19 09:52:01] 2025-04-18 23:52:00,940 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-19 09:52:01] 2025-04-18 23:52:01,040 [wrapper] ==== pilot stdout END ====
[2025-04-19 09:52:01] 2025-04-18 23:52:01,048 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-19 09:52:01] 2025-04-18 23:52:01,053 [wrapper] pilotpid: 35984
[2025-04-19 09:52:01] 2025-04-18 23:52:01,059 [wrapper] Pilot exit status: 0
[2025-04-19 09:52:01] 2025-04-18 23:52:01,104 [wrapper] pandaids: 6606055670
[2025-04-19 09:52:01] 2025-04-18 23:52:01,186 [wrapper] cleanup supervisor_pilot   56513 35985
[2025-04-19 09:52:01] 2025-04-18 23:52:01,193 [wrapper] Test setup, not cleaning
[2025-04-19 09:52:01] 2025-04-18 23:52:01,198 [wrapper] apfmon messages muted
[2025-04-19 09:52:01] 2025-04-18 23:52:01,204 [wrapper] ==== wrapper stdout END ====
[2025-04-19 09:52:01] 2025-04-18 23:52:01,210 [wrapper] ==== wrapper stderr END ====
[2025-04-19 09:52:01]  *** Error codes and diagnostics ***
[2025-04-19 09:52:01]     "exeErrorCode": 0,
[2025-04-19 09:52:01]     "exeErrorDiag": "",
[2025-04-19 09:52:01]     "pilotErrorCode": 0,
[2025-04-19 09:52:01]     "pilotErrorDiag": "",
[2025-04-19 09:52:01]  *** Listing of results directory ***
[2025-04-19 09:52:01] total 412596
[2025-04-19 09:52:01] -rw-r--r-- 1 boinc boinc    495897 Apr 18 11:45 pilot3.tar.gz
[2025-04-19 09:52:01] -rw-r--r-- 1 boinc boinc      5111 Apr 18 11:50 queuedata.json
[2025-04-19 09:52:01] -rwx------ 1 boinc boinc     37140 Apr 18 11:52 runpilot2-wrapper.sh
[2025-04-19 09:52:01] -rw-r--r-- 1 boinc boinc       100 Apr 19 08:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-19 09:52:01] -rwxr-xr-x 1 boinc boinc      7986 Apr 19 08:08 run_atlas
[2025-04-19 09:52:01] -rw-r--r-- 1 boinc boinc       105 Apr 19 08:08 job.xml
[2025-04-19 09:52:01] -rw-r--r-- 1 boinc boinc      6256 Apr 19 08:08 init_data.xml
[2025-04-19 09:52:01] -rw-r--r-- 2 boinc boinc 225815932 Apr 19 08:08 EVNT.44075481._002445.pool.root.1
[2025-04-19 09:52:01] -rw-r--r-- 2 boinc boinc     17569 Apr 19 08:08 start_atlas.sh
[2025-04-19 09:52:01] drwxrwx--x 2 boinc boinc      4096 Apr 19 08:08 shared
[2025-04-19 09:52:01] -rw-r--r-- 2 boinc boinc    508894 Apr 19 08:08 input.tar.gz
[2025-04-19 09:52:01] -rw-r--r-- 1 boinc boinc         0 Apr 19 08:08 boinc_lockfile
[2025-04-19 09:52:01] -rw-r--r-- 1 boinc boinc      2578 Apr 19 08:08 pandaJob.out
[2025-04-19 09:52:01] -rw------- 1 boinc boinc       424 Apr 19 08:08 setup.sh.local
[2025-04-19 09:52:01] -rw------- 1 boinc boinc    991300 Apr 19 08:08 agis_schedconf.cvmfs.json
[2025-04-19 09:52:01] -rw------- 1 boinc boinc   1618536 Apr 19 08:08 agis_ddmendpoints.agis.ALL.json
[2025-04-19 09:52:01] drwx------ 4 boinc boinc      4096 Apr 19 08:08 pilot3
[2025-04-19 09:52:01] -rw------- 1 boinc boinc        96 Apr 19 09:51 pilot_heartbeat.json
[2025-04-19 09:52:01] -rw------- 1 boinc boinc 191831028 Apr 19 09:51 HITS.44075483._062915.pool.root.1
[2025-04-19 09:52:01] -rw-r--r-- 1 boinc boinc       529 Apr 19 09:51 boinc_task_state.xml
[2025-04-19 09:52:01] -rw------- 1 boinc boinc      1012 Apr 19 09:51 memory_monitor_summary.json
[2025-04-19 09:52:01] -rw------- 1 boinc boinc    240953 Apr 19 09:51 log.44075483._062915.job.log.tgz.1
[2025-04-19 09:52:01] -rw------- 1 boinc boinc      7650 Apr 19 09:51 heartbeat.json
[2025-04-19 09:52:01] -rw-r--r-- 1 boinc boinc        27 Apr 19 09:51 wrapper_checkpoint.txt
[2025-04-19 09:52:01] -rw------- 1 boinc boinc      4415 Apr 19 09:52 pilotlog.txt
[2025-04-19 09:52:01] -rw-r--r-- 1 boinc boinc      8192 Apr 19 09:52 boinc_mmap_file
[2025-04-19 09:52:01] -rw------- 1 boinc boinc    251410 Apr 19 09:52 log.44075483._062915.job.log.1
[2025-04-19 09:52:01] -rw------- 1 boinc boinc       357 Apr 19 09:52 output.list
[2025-04-19 09:52:01] -rw-r--r-- 1 boinc boinc       620 Apr 19 09:52 runtime_log
[2025-04-19 09:52:01] -rw------- 1 boinc boinc    512000 Apr 19 09:52 result.tar.gz
[2025-04-19 09:52:01] -rw-r--r-- 1 boinc boinc     10993 Apr 19 09:52 runtime_log.err
[2025-04-19 09:52:01] -rw------- 1 boinc boinc       649 Apr 19 09:52 DdYNDmy4pP7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmLd4KDmpVjG0n.diag
[2025-04-19 09:52:01] -rw-r--r-- 1 boinc boinc     21807 Apr 19 09:52 stderr.txt
[2025-04-19 09:52:01] HITS file was successfully produced:
[2025-04-19 09:52:01] -rw------- 1 boinc boinc 191831028 Apr 19 09:51 shared/HITS.pool.root.1
[2025-04-19 09:52:01]  *** Contents of shared directory: ***
[2025-04-19 09:52:01] total 408888
[2025-04-19 09:52:01] -rw-r--r-- 2 boinc boinc 225815932 Apr 19 08:08 ATLAS.root_0
[2025-04-19 09:52:01] -rw-r--r-- 2 boinc boinc     17569 Apr 19 08:08 start_atlas.sh
[2025-04-19 09:52:01] -rw-r--r-- 2 boinc boinc    508894 Apr 19 08:08 input.tar.gz
[2025-04-19 09:52:01] -rw------- 1 boinc boinc 191831028 Apr 19 09:51 HITS.pool.root.1
[2025-04-19 09:52:01] -rw------- 1 boinc boinc    512000 Apr 19 09:52 result.tar.gz
09:52:02 (32356): run_atlas exited; CPU time 24027.824499
09:52:02 (32356): called boinc_finish(0)

</stderr_txt>
]]>

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