Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
04:19:18 (2501742): wrapper (7.7.26015): starting
04:19:18 (2501742): wrapper: running run_atlas (--nthreads 4)
[2025-04-19 04:19:18] Arguments: --nthreads 4
[2025-04-19 04:19:18] Threads: 4
[2025-04-19 04:19:18] Checking for CVMFS
[2025-04-19 04:19:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-19 04:19:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-19 04:19:18] Running cvmfs_config stat atlas.cern.ch
[2025-04-19 04:19:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-19 04:19:18] 2.12.7.0 84362 15069 58340 145022 0 56 4620252 6144000 1832 130560 0 30693991 99.982 3498154 6733 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.42:3128 1
[2025-04-19 04:19:18] CVMFS is ok
[2025-04-19 04:19:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-19 04:19:18] Checking for apptainer binary...
[2025-04-19 04:19:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-19 04:19:18] Running /usr/bin/apptainer --version
[2025-04-19 04:19:18] apptainer version 1.4.0
[2025-04-19 04:19:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-19 04:19:19] Ryzen8
[2025-04-19 04:19:19] apptainer works
[2025-04-19 04:19:19] Set ATHENA_PROC_NUMBER=4
[2025-04-19 04:19:19] Set ATHENA_CORE_NUMBER=4
[2025-04-19 04:19:19] Starting ATLAS job with PandaID=6606054781
[2025-04-19 04:19:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-19 05:45:08]  *** The last 200 lines of the pilot log: ***
[2025-04-19 05:45:08]  filetype=log
[2025-04-19 05:45:08]  guid=aa44e6c5-ea6e-41d2-952d-a403a41b6c37
[2025-04-19 05:45:08]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-04-19 05:45:08]  is_altstaged=None
[2025-04-19 05:45:08]  is_tar=False
[2025-04-19 05:45:08]  lfn=log.44075483._062672.job.log.tgz.1
[2025-04-19 05:45:08]  mtime=0
[2025-04-19 05:45:08]  protocol_id=None
[2025-04-19 05:45:08]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-19 05:45:08]  replicas=None
[2025-04-19 05:45:08]  scope=mc23_13p6TeV
[2025-04-19 05:45:08]  status=None
[2025-04-19 05:45:08]  status_code=0
[2025-04-19 05:45:08]  storage_token=
[2025-04-19 05:45:08]  surl=/var/lib/boinc/slots/0/PanDA_Pilot-6606054781/log.44075483._062672.job.log.tgz.1
[2025-04-19 05:45:08]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/64/28/log.44075483._062672.job.log.tgz.1
[2025-04-19 05:45:08]  workdir=None
[2025-04-19 05:45:08] ]
[2025-04-19 05:45:08] 2025-04-19 03:44:43,830 | INFO     | transferring file log.44075483._062672.job.log.tgz.1 from /var/lib/boinc/slots/0/PanDA_Pilot-6606054781/log.44075483._062672.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-04-19 05:45:08] 2025-04-19 03:44:43,830 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-6606054781/log.44075483._062672.job.log.tgz.1 /var/lib/boinc/slots/0/log.44075483._062672.job
[2025-04-19 05:45:08] 2025-04-19 03:44:43,840 | INFO     | adding to output.list: log.44075483._062672.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/64/28/log.44075483._062672.job.log.tg
[2025-04-19 05:45:08] 2025-04-19 03:44:43,840 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-19 05:45:08] 2025-04-19 03:44:43,841 | INFO     | summary of transferred files:
[2025-04-19 05:45:08] 2025-04-19 03:44:43,841 | INFO     |  -- lfn=log.44075483._062672.job.log.tgz.1, status_code=0, status=transferred
[2025-04-19 05:45:08] 2025-04-19 03:44:43,841 | INFO     | stage-out finished correctly
[2025-04-19 05:45:08] 2025-04-19 03:44:44,803 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-19 05:45:08] 2025-04-19 03:44:45,347 | INFO     | monitor loop #391: job 0:6606054781 is in state 'finished'
[2025-04-19 05:45:08] 2025-04-19 03:44:45,347 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 05:45:08] 2025-04-19 03:44:46,590 | INFO     | job 6606054781 has state=finished
[2025-04-19 05:45:08] 2025-04-19 03:44:46,591 | INFO     | preparing for final server update for job 6606054781 in state='finished'
[2025-04-19 05:45:08] 2025-04-19 03:44:46,591 | INFO     | this job has now completed (state=finished)
[2025-04-19 05:45:08] 2025-04-19 03:44:46,591 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-19 05:45:08] 2025-04-19 03:44:46,591 | INFO     | log transfer has been attempted: DONE
[2025-04-19 05:45:08] 2025-04-19 03:44:46,591 | INFO     | job 6606054781 has finished - writing final server update
[2025-04-19 05:45:08] 2025-04-19 03:44:46,591 | INFO     | total number of processed events: 400 (read)
[2025-04-19 05:45:08] 2025-04-19 03:44:46,592 | INFO     | executing command: lscpu
[2025-04-19 05:45:08] 2025-04-19 03:44:46,608 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-19 05:45:08] 2025-04-19 03:44:47,850 | INFO     | monitor loop #392: job 0:6606054781 is in state 'finished'
[2025-04-19 05:45:08] 2025-04-19 03:44:47,850 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 05:45:08] 2025-04-19 03:44:48,945 | INFO     | CPU arch script returned: x86-64-v4
[2025-04-19 05:45:08] 2025-04-19 03:44:48,945 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6606054781/memory_monitor_summary.json (trf name=prmon)
[2025-04-19 05:45:08] 2025-04-19 03:44:48,945 | INFO     | extracted standard info from prmon json
[2025-04-19 05:45:08] 2025-04-19 03:44:48,946 | INFO     | extracted standard memory fields from prmon json
[2025-04-19 05:45:08] 2025-04-19 03:44:48,946 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-19 05:45:08] 2025-04-19 03:44:48,946 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-19 05:45:08] 2025-04-19 03:44:48,946 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-19 05:45:08] 2025-04-19 03:44:48,947 | INFO     | fitting pss+swap vs Time
[2025-04-19 05:45:08] 2025-04-19 03:44:48,947 | INFO     | sum of square deviations: 141539398.0
[2025-04-19 05:45:08] 2025-04-19 03:44:48,947 | INFO     | sum of deviations: -4508742166.0
[2025-04-19 05:45:08] 2025-04-19 03:44:48,947 | INFO     | mean x: 1745031804.0
[2025-04-19 05:45:08] 2025-04-19 03:44:48,947 | INFO     | mean y: 2412241.948051948
[2025-04-19 05:45:08] 2025-04-19 03:44:48,947 | INFO     | -- intersect: 55590457598.095795
[2025-04-19 05:45:08] 2025-04-19 03:44:48,947 | INFO     | intersect: 55590457598.095795
[2025-04-19 05:45:08] 2025-04-19 03:44:48,947 | INFO     | chi2: 0.007556199043434276
[2025-04-19 05:45:08] 2025-04-19 03:44:48,947 | INFO     | -- intersect: 55590457598.095795
[2025-04-19 05:45:08] 2025-04-19 03:44:48,947 | INFO     | current memory leak: -31.86 B/s (using 77 data points, chi2=0.01)
[2025-04-19 05:45:08] 2025-04-19 03:44:48,948 | INFO     | ..............................
[2025-04-19 05:45:08] 2025-04-19 03:44:48,948 | INFO     | . Timing measurements:
[2025-04-19 05:45:08] 2025-04-19 03:44:48,948 | INFO     | . get job = 0 s
[2025-04-19 05:45:08] 2025-04-19 03:44:48,948 | INFO     | . initial setup = 1 s
[2025-04-19 05:45:08] 2025-04-19 03:44:48,948 | INFO     | . payload setup = 2 s
[2025-04-19 05:45:08] 2025-04-19 03:44:48,948 | INFO     | . stage-in = 0 s
[2025-04-19 05:45:08] 2025-04-19 03:44:48,948 | INFO     | . payload execution = 5100 s
[2025-04-19 05:45:08] 2025-04-19 03:44:48,948 | INFO     | . stage-out = 0 s
[2025-04-19 05:45:08] 2025-04-19 03:44:48,948 | INFO     | . log creation = 0 s
[2025-04-19 05:45:08] 2025-04-19 03:44:48,948 | INFO     | ..............................
[2025-04-19 05:45:08] 2025-04-19 03:44:49,409 | INFO     | 
[2025-04-19 05:45:08] 2025-04-19 03:44:49,409 | INFO     | job summary report
[2025-04-19 05:45:08] 2025-04-19 03:44:49,409 | INFO     | --------------------------------------------------
[2025-04-19 05:45:08] 2025-04-19 03:44:49,409 | INFO     | PanDA job id: 6606054781
[2025-04-19 05:45:08] 2025-04-19 03:44:49,409 | INFO     | task id: 44075483
[2025-04-19 05:45:08] 2025-04-19 03:44:49,409 | INFO     | errors: (none)
[2025-04-19 05:45:08] 2025-04-19 03:44:49,409 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-19 05:45:08] 2025-04-19 03:44:49,409 | INFO     | pilot state: finished 
[2025-04-19 05:45:08] 2025-04-19 03:44:49,409 | INFO     | transexitcode: 0
[2025-04-19 05:45:08] 2025-04-19 03:44:49,409 | INFO     | exeerrorcode: 0
[2025-04-19 05:45:08] 2025-04-19 03:44:49,409 | INFO     | exeerrordiag: 
[2025-04-19 05:45:08] 2025-04-19 03:44:49,409 | INFO     | exitcode: 0
[2025-04-19 05:45:08] 2025-04-19 03:44:49,409 | INFO     | exitmsg: OK
[2025-04-19 05:45:08] 2025-04-19 03:44:49,409 | INFO     | cpuconsumptiontime: 19189 s
[2025-04-19 05:45:08] 2025-04-19 03:44:49,409 | INFO     | nevents: 400
[2025-04-19 05:45:08] 2025-04-19 03:44:49,409 | INFO     | neventsw: 0
[2025-04-19 05:45:08] 2025-04-19 03:44:49,409 | INFO     | pid: 2511805
[2025-04-19 05:45:08] 2025-04-19 03:44:49,410 | INFO     | pgrp: 2511805
[2025-04-19 05:45:08] 2025-04-19 03:44:49,410 | INFO     | corecount: 4
[2025-04-19 05:45:08] 2025-04-19 03:44:49,410 | INFO     | event service: False
[2025-04-19 05:45:08] 2025-04-19 03:44:49,410 | INFO     | sizes: {0: 2426596, 1: 2426851, 2: 2427057, 11: 2427085, 5106: 2453427, 5108: 2462368, 5109: 2462552, 5113: 2462722}
[2025-04-19 05:45:08] 2025-04-19 03:44:49,410 | INFO     | --------------------------------------------------
[2025-04-19 05:45:08] 2025-04-19 03:44:49,410 | INFO     | 
[2025-04-19 05:45:08] 2025-04-19 03:44:49,410 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-04-19 05:45:08] 2025-04-19 03:44:49,420 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-19 05:45:08] 2025-04-19 03:44:49,421 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-19 05:45:08] 2025-04-19 03:44:49,421 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-19 05:45:08] 2025-04-19 03:44:49,421 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-19 05:45:08] 2025-04-19 03:44:49,421 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-19 05:45:08] 2025-04-19 03:44:49,421 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-19 05:45:08] 2025-04-19 03:44:49,421 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-19 05:45:08] 2025-04-19 03:44:49,421 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-19 05:45:08] 2025-04-19 03:44:49,421 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-19 05:45:08] 2025-04-19 03:44:49,421 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-19 05:45:08] 2025-04-19 03:44:49,421 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-19 05:45:08] 2025-04-19 03:44:49,421 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-19 05:45:08] 2025-04-19 03:44:49,421 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-19 05:45:08] 2025-04-19 03:44:49,421 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-19 05:45:08] 2025-04-19 03:44:49,421 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-19 05:45:08] 2025-04-19 03:44:49,421 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-19 05:45:08] 2025-04-19 03:44:49,421 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-19 05:45:08] 2025-04-19 03:44:49,421 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-19 05:45:08] 2025-04-19 03:44:49,421 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-19 05:45:08] 2025-04-19 03:44:49,421 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-19 05:45:08] 2025-04-19 03:44:49,421 | INFO     | job 6606054781 has completed (purged errors)
[2025-04-19 05:45:08] 2025-04-19 03:44:49,421 | INFO     | overall cleanup function is called
[2025-04-19 05:45:08] 2025-04-19 03:44:50,426 | INFO     | --- collectZombieJob: --- 10, [2511805]
[2025-04-19 05:45:08] 2025-04-19 03:44:50,426 | INFO     | zombie collector waiting for pid 2511805
[2025-04-19 05:45:08] 2025-04-19 03:44:50,426 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-19 05:45:08] 2025-04-19 03:44:50,427 | INFO     | collected zombie processes
[2025-04-19 05:45:08] 2025-04-19 03:44:50,427 | INFO     | will attempt to kill all subprocesses of pid=2511805
[2025-04-19 05:45:08] 2025-04-19 03:44:50,474 | INFO     | process IDs to be killed: [2511805] (in reverse order)
[2025-04-19 05:45:08] 2025-04-19 03:44:50,499 | WARNING  | found no corresponding commands to process id(s)
[2025-04-19 05:45:08] 2025-04-19 03:44:50,499 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-19 05:45:08] 2025-04-19 03:44:50,501 | INFO     | did not find any defunct processes belonging to 2511805
[2025-04-19 05:45:08] 2025-04-19 03:44:50,503 | INFO     | did not find any defunct processes belonging to 2511805
[2025-04-19 05:45:08] 2025-04-19 03:44:50,503 | INFO     | ready for new job
[2025-04-19 05:45:08] 2025-04-19 03:44:50,503 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-19 05:45:08] 2025-04-19 03:44:50,504 | INFO     | **************************************
[2025-04-19 05:45:08] 2025-04-19 03:44:50,504 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-19 05:45:08] 2025-04-19 03:44:50,504 | INFO     | **************************************
[2025-04-19 05:45:08] 2025-04-19 03:44:50,504 | INFO     | 
[2025-04-19 05:45:08] 2025-04-19 03:44:50,504 | INFO     | architecture information:
[2025-04-19 05:45:08] 2025-04-19 03:44:50,504 | INFO     | executing command: cat /etc/os-release
[2025-04-19 05:45:08] 2025-04-19 03:44:50,513 | INFO     | cat /etc/os-release:
[2025-04-19 05:45:08] NAME="CentOS Linux"
[2025-04-19 05:45:08] VERSION="7 (Core)"
[2025-04-19 05:45:08] ID="centos"
[2025-04-19 05:45:08] ID_LIKE="rhel fedora"
[2025-04-19 05:45:08] VERSION_ID="7"
[2025-04-19 05:45:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-19 05:45:08] ANSI_COLOR="0;31"
[2025-04-19 05:45:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-19 05:45:08] HOME_URL="https://www.centos.org/"
[2025-04-19 05:45:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-19 05:45:08] 
[2025-04-19 05:45:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-19 05:45:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-19 05:45:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-19 05:45:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-19 05:45:08] 
[2025-04-19 05:45:08] 2025-04-19 03:44:50,514 | INFO     | **************************************
[2025-04-19 05:45:08] 2025-04-19 03:44:51,016 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-04-19 05:45:08] 2025-04-19 03:44:51,026 | INFO     | sufficient remaining disk space (88987402240 B)
[2025-04-19 05:45:08] 2025-04-19 03:44:51,026 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-19 05:45:08] 2025-04-19 03:44:51,026 | INFO     | current server update state: UPDATING_FINAL
[2025-04-19 05:45:08] 2025-04-19 03:44:51,026 | INFO     | update_server=False
[2025-04-19 05:45:08] 2025-04-19 03:44:51,026 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-19 05:45:08] 2025-04-19 03:44:51,026 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-19 05:45:08] 2025-04-19 03:44:51,027 | INFO     | found 0 job(s) in 20 queues
[2025-04-19 05:45:08] 2025-04-19 03:44:51,027 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-19 05:45:08] 2025-04-19 03:44:51,027 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-19 05:45:08] 2025-04-19 03:44:51,027 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-19 05:45:08] 2025-04-19 03:44:51,220 | INFO     | all data control threads have been joined
[2025-04-19 05:45:08] 2025-04-19 03:44:51,358 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-19 05:45:08] 2025-04-19 03:44:51,358 | INFO     | aborting loop
[2025-04-19 05:45:08] 2025-04-19 03:44:51,893 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-19 05:45:08] 2025-04-19 03:44:52,027 | INFO     | [job] retrieve thread has finished
[2025-04-19 05:45:08] 2025-04-19 03:44:52,109 | INFO     | all payload control threads have been joined
[2025-04-19 05:45:08] 2025-04-19 03:44:52,125 | INFO     | [job] create_data_payload thread has finished
[2025-04-19 05:45:08] 2025-04-19 03:44:52,193 | INFO     | [payload] validate_pre thread has finished
[2025-04-19 05:45:08] 2025-04-19 03:44:52,225 | INFO     | [data] control thread has finished
[2025-04-19 05:45:08] 2025-04-19 03:44:52,363 | INFO     | [job] job monitor thread has finished
[2025-04-19 05:45:08] 2025-04-19 03:44:52,416 | INFO     | all job control threads have been joined
[2025-04-19 05:45:08] 2025-04-19 03:44:52,443 | INFO     | [payload] execute_payloads thread has finished
[2025-04-19 05:45:08] 2025-04-19 03:44:52,447 | INFO     | [data] copytool_in thread has finished
[2025-04-19 05:45:08] 2025-04-19 03:44:53,095 | INFO     | [payload] validate_post thread has finished
[2025-04-19 05:45:08] 2025-04-19 03:44:53,114 | INFO     | [payload] control thread has finished
[2025-04-19 05:45:08] 2025-04-19 03:44:53,421 | INFO     | [job] control thread has finished
[2025-04-19 05:45:08] 2025-04-19 03:44:53,495 | INFO     | [job] validate thread has finished
[2025-04-19 05:45:08] 2025-04-19 03:44:53,589 | INFO     | [payload] failed_post thread has finished
[2025-04-19 05:45:08] 2025-04-19 03:44:53,898 | INFO     | [data] copytool_out thread has finished
[2025-04-19 05:45:08] 2025-04-19 03:44:54,004 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-19 05:45:08] 2025-04-19 03:44:55,009 | INFO     | [job] queue monitor thread has finished
[2025-04-19 05:45:08] 2025-04-19 03:44:55,032 | INFO     | [data] queue_monitor thread has finished
[2025-04-19 05:45:08] 2025-04-19 03:45:01,526 | INFO     | job.realtimelogging is not enabled
[2025-04-19 05:45:08] 2025-04-19 03:45:02,530 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-19 05:45:08] 2025-04-19 03:45:02,965 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 135439275972416)>', '<ExcThread(monitor, started 135438985557760)>']
[2025-04-19 05:45:08] 2025-04-19 03:45:03,084 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-19 05:45:08] 2025-04-19 03:45:03,084 | INFO     | [monitor] control thread has ended
[2025-04-19 05:45:08] 2025-04-19 03:45:07,991 | INFO     | all workflow threads have been joined
[2025-04-19 05:45:08] 2025-04-19 03:45:07,991 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-19 05:45:08] 2025-04-19 03:45:07,991 | INFO     | traces error code: 0
[2025-04-19 05:45:08] 2025-04-19 03:45:07,991 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-19 05:45:08] 2025-04-19 03:45:08,053 [wrapper] ==== pilot stdout END ====
[2025-04-19 05:45:08] 2025-04-19 03:45:08,055 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-19 05:45:08] 2025-04-19 03:45:08,056 [wrapper] pilotpid: 2505381
[2025-04-19 05:45:08] 2025-04-19 03:45:08,057 [wrapper] Pilot exit status: 0
[2025-04-19 05:45:08] 2025-04-19 03:45:08,062 [wrapper] pandaids: 6606054781
[2025-04-19 05:45:08] 2025-04-19 03:45:08,078 [wrapper] cleanup supervisor_pilot 2565450 2505382
[2025-04-19 05:45:08] 2025-04-19 03:45:08,079 [wrapper] Test setup, not cleaning
[2025-04-19 05:45:08] 2025-04-19 03:45:08,081 [wrapper] apfmon messages muted
[2025-04-19 05:45:08] 2025-04-19 03:45:08,082 [wrapper] ==== wrapper stdout END ====
[2025-04-19 05:45:08] 2025-04-19 03:45:08,083 [wrapper] ==== wrapper stderr END ====
[2025-04-19 05:45:08]  *** Error codes and diagnostics ***
[2025-04-19 05:45:08]     "exeErrorCode": 0,
[2025-04-19 05:45:08]     "exeErrorDiag": "",
[2025-04-19 05:45:08]     "pilotErrorCode": 0,
[2025-04-19 05:45:08]     "pilotErrorDiag": "",
[2025-04-19 05:45:08]  *** Listing of results directory ***
[2025-04-19 05:45:08] insgesamt 411836
[2025-04-19 05:45:08] -rw-r--r-- 1 boinc boinc    495897 18. Apr 03:07 pilot3.tar.gz
[2025-04-19 05:45:08] -rw-r--r-- 1 boinc boinc      5111 18. Apr 03:22 queuedata.json
[2025-04-19 05:45:08] -rwx------ 1 boinc boinc     37140 18. Apr 03:24 runpilot2-wrapper.sh
[2025-04-19 05:45:08] -rw-r--r-- 1 boinc boinc       100 19. Apr 04:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-19 05:45:08] -rwxr-xr-x 1 boinc boinc      7986 19. Apr 04:19 run_atlas
[2025-04-19 05:45:08] -rw-r--r-- 1 boinc boinc       105 19. Apr 04:19 job.xml
[2025-04-19 05:45:08] -rw-r--r-- 1 boinc boinc      9581 19. Apr 04:19 init_data.xml
[2025-04-19 05:45:08] -rw-r--r-- 2 boinc boinc 223248167 19. Apr 04:19 EVNT.44075481._002435.pool.root.1
[2025-04-19 05:45:08] -rw-r--r-- 2 boinc boinc     17569 19. Apr 04:19 start_atlas.sh
[2025-04-19 05:45:08] drwxrwx--x 2 boinc boinc      4096 19. Apr 04:19 shared
[2025-04-19 05:45:08] -rw-r--r-- 2 boinc boinc    508895 19. Apr 04:19 input.tar.gz
[2025-04-19 05:45:08] -rw-r--r-- 1 boinc boinc         0 19. Apr 04:19 boinc_lockfile
[2025-04-19 05:45:08] -rw-r--r-- 1 boinc boinc      2578 19. Apr 04:19 pandaJob.out
[2025-04-19 05:45:08] -rw------- 1 boinc boinc       461 19. Apr 04:19 setup.sh.local
[2025-04-19 05:45:08] -rw------- 1 boinc boinc    991292 19. Apr 04:19 agis_schedconf.cvmfs.json
[2025-04-19 05:45:08] -rw------- 1 boinc boinc   1618536 19. Apr 04:19 agis_ddmendpoints.agis.ALL.json
[2025-04-19 05:45:08] drwx------ 4 boinc boinc      4096 19. Apr 04:19 pilot3
[2025-04-19 05:45:08] -rw------- 1 boinc boinc        95 19. Apr 05:43 pilot_heartbeat.json
[2025-04-19 05:45:08] -rw------- 1 boinc boinc 193061759 19. Apr 05:44 HITS.44075483._062672.pool.root.1
[2025-04-19 05:45:08] -rw-r--r-- 1 boinc boinc       530 19. Apr 05:44 boinc_task_state.xml
[2025-04-19 05:45:08] -rw------- 1 boinc boinc      1036 19. Apr 05:44 memory_monitor_summary.json
[2025-04-19 05:45:08] -rw------- 1 boinc boinc    254090 19. Apr 05:44 log.44075483._062672.job.log.tgz.1
[2025-04-19 05:45:08] -rw------- 1 boinc boinc      7663 19. Apr 05:44 heartbeat.json
[2025-04-19 05:45:08] -rw-r--r-- 1 boinc boinc      8192 19. Apr 05:44 boinc_mmap_file
[2025-04-19 05:45:08] -rw-r--r-- 1 boinc boinc        27 19. Apr 05:44 wrapper_checkpoint.txt
[2025-04-19 05:45:08] -rw------- 1 boinc boinc      4548 19. Apr 05:45 pilotlog.txt
[2025-04-19 05:45:08] -rw------- 1 boinc boinc    511965 19. Apr 05:45 log.44075483._062672.job.log.1
[2025-04-19 05:45:08] -rw-r--r-- 1 boinc boinc       620 19. Apr 05:45 runtime_log
[2025-04-19 05:45:08] -rw------- 1 boinc boinc    788480 19. Apr 05:45 result.tar.gz
[2025-04-19 05:45:08] -rw------- 1 boinc boinc       357 19. Apr 05:45 output.list
[2025-04-19 05:45:08] -rw-r--r-- 1 boinc boinc     11342 19. Apr 05:45 runtime_log.err
[2025-04-19 05:45:08] -rw------- 1 boinc boinc       641 19. Apr 05:45 gUuMDm1dpP7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmi6dLDmJG67im.diag
[2025-04-19 05:45:08] -rw-r--r-- 1 boinc boinc     20889 19. Apr 05:45 stderr.txt
[2025-04-19 05:45:08] HITS file was successfully produced:
[2025-04-19 05:45:08] -rw------- 1 boinc boinc 193061759 19. Apr 05:44 shared/HITS.pool.root.1
[2025-04-19 05:45:08]  *** Contents of shared directory: ***
[2025-04-19 05:45:08] insgesamt 407856
[2025-04-19 05:45:08] -rw-r--r-- 2 boinc boinc 223248167 19. Apr 04:19 ATLAS.root_0
[2025-04-19 05:45:08] -rw-r--r-- 2 boinc boinc     17569 19. Apr 04:19 start_atlas.sh
[2025-04-19 05:45:08] -rw-r--r-- 2 boinc boinc    508895 19. Apr 04:19 input.tar.gz
[2025-04-19 05:45:08] -rw------- 1 boinc boinc 193061759 19. Apr 05:44 HITS.pool.root.1
[2025-04-19 05:45:08] -rw------- 1 boinc boinc    788480 19. Apr 05:45 result.tar.gz
05:45:09 (2501742): run_atlas exited; CPU time 19216.302543
05:45:09 (2501742): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN