Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:44:03 (3544028): wrapper (7.7.26015): starting
15:44:03 (3544028): wrapper: running run_atlas (--nthreads 4)
[2025-04-19 15:44:03] Arguments: --nthreads 4
[2025-04-19 15:44:03] Threads: 4
[2025-04-19 15:44:03] Checking for CVMFS
[2025-04-19 15:44:03] No cvmfs_config command found, will try listing directly
[2025-04-19 15:44:03] CVMFS is ok
[2025-04-19 15:44:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-19 15:44:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-19 15:44:03] Further information can be found at the LHC@home message board.
[2025-04-19 15:44:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-19 15:44:03] Checking for apptainer binary...
[2025-04-19 15:44:03] which: no apptainer in ((null))
[2025-04-19 15:44:03] apptainer is not installed, using version from CVMFS
[2025-04-19 15:44:03] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-19 15:44:03] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot96/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut10.grid.cesnet.cz
[2025-04-19 15:44:03] apptainer works
[2025-04-19 15:44:03] Set ATHENA_PROC_NUMBER=4
[2025-04-19 15:44:03] Set ATHENA_CORE_NUMBER=4
[2025-04-19 15:44:03] Starting ATLAS job with PandaID=6605947095
[2025-04-19 15:44:03] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot96/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-19 18:04:14]  *** The last 200 lines of the pilot log: ***
[2025-04-19 18:04:14] 2025-04-19 16:03:54,547 | INFO     | intersect: -141485596280.74924
[2025-04-19 18:04:14] 2025-04-19 16:03:54,547 | INFO     | chi2: 4.069670790822695
[2025-04-19 18:04:14] 2025-04-19 16:03:54,547 | INFO     | current chi2=4.069670790822695 (change=0.13056507902386336 %)
[2025-04-19 18:04:14] 2025-04-19 16:03:54,547 | INFO     | right removable region: 131
[2025-04-19 18:04:14] 2025-04-19 16:03:54,547 | INFO     | sum of square deviations: 713140813.0
[2025-04-19 18:04:14] 2025-04-19 16:03:54,548 | INFO     | sum of deviations: 29304878148.5
[2025-04-19 18:04:14] 2025-04-19 16:03:54,548 | INFO     | mean x: 1745074584.5
[2025-04-19 18:04:14] 2025-04-19 16:03:54,548 | INFO     | mean y: 2280399.371212121
[2025-04-19 18:04:14] 2025-04-19 16:03:54,548 | INFO     | -- intersect: -71707537811.26703
[2025-04-19 18:04:14] 2025-04-19 16:03:54,548 | INFO     | intersect: -71707537811.26703
[2025-04-19 18:04:14] 2025-04-19 16:03:54,549 | INFO     | chi2: 1.5303339143423056
[2025-04-19 18:04:14] 2025-04-19 16:03:54,549 | INFO     | current chi2=1.5303339143423056 (change=62.445713395191895 %)
[2025-04-19 18:04:14] 2025-04-19 16:03:54,549 | INFO     | sum of square deviations: 635130048.0
[2025-04-19 18:04:14] 2025-04-19 16:03:54,550 | INFO     | sum of deviations: 4760381622.999998
[2025-04-19 18:04:14] 2025-04-19 16:03:54,550 | INFO     | mean x: 1745074737.0
[2025-04-19 18:04:14] 2025-04-19 16:03:54,550 | INFO     | mean y: 2328396.5433070865
[2025-04-19 18:04:14] 2025-04-19 16:03:54,550 | INFO     | -- intersect: -13077231820.98297
[2025-04-19 18:04:14] 2025-04-19 16:03:54,550 | INFO     | intersect: -13077231820.98297
[2025-04-19 18:04:14] 2025-04-19 16:03:54,550 | INFO     | chi2: 0.07919021723732952
[2025-04-19 18:04:14] 2025-04-19 16:03:54,550 | INFO     | current chi2=0.07919021723732952 (change=94.82529815910384 %)
[2025-04-19 18:04:14] 2025-04-19 16:03:54,551 | INFO     | sum of square deviations: 563026370.5
[2025-04-19 18:04:14] 2025-04-19 16:03:54,551 | INFO     | sum of deviations: 830063203.4999999
[2025-04-19 18:04:14] 2025-04-19 16:03:54,551 | INFO     | mean x: 1745074889.5
[2025-04-19 18:04:14] 2025-04-19 16:03:54,551 | INFO     | mean y: 2336528.2868852457
[2025-04-19 18:04:14] 2025-04-19 16:03:54,552 | INFO     | -- intersect: -2570407003.84893
[2025-04-19 18:04:14] 2025-04-19 16:03:54,552 | INFO     | intersect: -2570407003.84893
[2025-04-19 18:04:14] 2025-04-19 16:03:54,552 | INFO     | chi2: 0.0037990956984000133
[2025-04-19 18:04:14] 2025-04-19 16:03:54,552 | INFO     | current chi2=0.0037990956984000133 (change=95.2025694196364 %)
[2025-04-19 18:04:14] 2025-04-19 16:03:54,552 | INFO     | sum of square deviations: 496597218.0
[2025-04-19 18:04:14] 2025-04-19 16:03:54,553 | INFO     | sum of deviations: 1197241815.0
[2025-04-19 18:04:14] 2025-04-19 16:03:54,553 | INFO     | mean x: 1745075042.0
[2025-04-19 18:04:14] 2025-04-19 16:03:54,553 | INFO     | mean y: 2335672.358974359
[2025-04-19 18:04:14] 2025-04-19 16:03:54,553 | INFO     | -- intersect: -4204850221.693459
[2025-04-19 18:04:14] 2025-04-19 16:03:54,553 | INFO     | intersect: -4204850221.693459
[2025-04-19 18:04:14] 2025-04-19 16:03:54,553 | INFO     | chi2: 0.0029646009805141867
[2025-04-19 18:04:14] 2025-04-19 16:03:54,554 | INFO     | current chi2=0.0029646009805141867 (change=21.965614560256366 %)
[2025-04-19 18:04:14] 2025-04-19 16:03:54,554 | INFO     | left removable region: 40
[2025-04-19 18:04:14] 2025-04-19 16:03:54,554 | INFO     | sum of square deviations: 233641590.0
[2025-04-19 18:04:14] 2025-04-19 16:03:54,554 | INFO     | sum of deviations: 1023058999.0
[2025-04-19 18:04:14] 2025-04-19 16:03:54,555 | INFO     | mean x: 1745075469.0
[2025-04-19 18:04:14] 2025-04-19 16:03:54,555 | INFO     | mean y: 2335173.3076923075
[2025-04-19 18:04:14] 2025-04-19 16:03:54,555 | INFO     | -- intersect: -7638920660.016313
[2025-04-19 18:04:14] 2025-04-19 16:03:54,555 | INFO     | intersect: -7638920660.016313
[2025-04-19 18:04:14] 2025-04-19 16:03:54,556 | INFO     | chi2: 0.00010842761034977128
[2025-04-19 18:04:14] 2025-04-19 16:03:54,556 | INFO     | -- intersect: -7638920660.016313
[2025-04-19 18:04:14] 2025-04-19 16:03:54,556 | INFO     | current memory leak: 4.38 B/s (using 91 data points, chi2=0.00)
[2025-04-19 18:04:14] 2025-04-19 16:03:54,556 | INFO     | sufficient remaining disk space (3328079560704 B)
[2025-04-19 18:04:14] 2025-04-19 16:03:54,557 | INFO     | ..............................
[2025-04-19 18:04:14] 2025-04-19 16:03:54,557 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-04-19 18:04:14] 2025-04-19 16:03:54,558 | INFO     | . Timing measurements:
[2025-04-19 18:04:14] 2025-04-19 16:03:54,558 | INFO     | . get job = 0 s
[2025-04-19 18:04:14] 2025-04-19 16:03:54,558 | INFO     | . initial setup = 1 s
[2025-04-19 18:04:14] 2025-04-19 16:03:54,558 | INFO     | . payload setup = 7 s
[2025-04-19 18:04:14] 2025-04-19 16:03:54,558 | INFO     | . stage-in = 0 s
[2025-04-19 18:04:14] 2025-04-19 16:03:54,558 | INFO     | . payload execution = 8346 s
[2025-04-19 18:04:14] 2025-04-19 16:03:54,558 | INFO     | . stage-out = 0 s
[2025-04-19 18:04:14] 2025-04-19 16:03:54,559 | INFO     | . log creation = 0 s
[2025-04-19 18:04:14] 2025-04-19 16:03:54,559 | INFO     | ..............................
[2025-04-19 18:04:14] 2025-04-19 16:03:54,649 | INFO     | size of work directory /scratch/boinc/var/slot96/slots/0/PanDA_Pilot-6605947095: 3117604 B (within 2537553920 B limit)
[2025-04-19 18:04:14] 2025-04-19 16:03:54,660 | INFO     | pfn file=/scratch/boinc/var/slot96/slots/0/PanDA_Pilot-6605947095/HITS.44075483._062482.pool.root.1 does not exist (skip from workdir size calculation)
[2025-04-19 18:04:14] 2025-04-19 16:03:54,660 | INFO     | total size of present files: 0 B (workdir size: 3117604 B)
[2025-04-19 18:04:14] 2025-04-19 16:03:54,660 | INFO     | output file size check: skipping output file /scratch/boinc/var/slot96/slots/0/PanDA_Pilot-6605947095/HITS.44075483._062482.pool.root.1 since it does not exist
[2025-04-19 18:04:14] 2025-04-19 16:03:54,666 | INFO     | 
[2025-04-19 18:04:14] 2025-04-19 16:03:54,667 | INFO     | job summary report
[2025-04-19 18:04:14] 2025-04-19 16:03:54,667 | INFO     | --------------------------------------------------
[2025-04-19 18:04:14] 2025-04-19 16:03:54,667 | INFO     | PanDA job id: 6605947095
[2025-04-19 18:04:14] 2025-04-19 16:03:54,667 | INFO     | task id: 44075483
[2025-04-19 18:04:14] 2025-04-19 16:03:54,667 | INFO     | errors: (none)
[2025-04-19 18:04:14] 2025-04-19 16:03:54,667 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-19 18:04:14] 2025-04-19 16:03:54,668 | INFO     | pilot state: finished 
[2025-04-19 18:04:14] 2025-04-19 16:03:54,668 | INFO     | transexitcode: 0
[2025-04-19 18:04:14] 2025-04-19 16:03:54,668 | INFO     | exeerrorcode: 0
[2025-04-19 18:04:14] 2025-04-19 16:03:54,668 | INFO     | exeerrordiag: 
[2025-04-19 18:04:14] 2025-04-19 16:03:54,668 | INFO     | exitcode: 0
[2025-04-19 18:04:14] 2025-04-19 16:03:54,668 | INFO     | exitmsg: OK
[2025-04-19 18:04:14] 2025-04-19 16:03:54,668 | INFO     | cpuconsumptiontime: 29893 s
[2025-04-19 18:04:14] 2025-04-19 16:03:54,668 | INFO     | nevents: 400
[2025-04-19 18:04:14] 2025-04-19 16:03:54,668 | INFO     | neventsw: 0
[2025-04-19 18:04:14] 2025-04-19 16:03:54,668 | INFO     | pid: 3555281
[2025-04-19 18:04:14] 2025-04-19 16:03:54,668 | INFO     | pgrp: 3555281
[2025-04-19 18:04:14] 2025-04-19 16:03:54,668 | INFO     | corecount: 4
[2025-04-19 18:04:14] 2025-04-19 16:03:54,668 | INFO     | event service: False
[2025-04-19 18:04:14] 2025-04-19 16:03:54,669 | INFO     | sizes: {0: 2426664, 1: 2426863, 7: 2427069, 12: 2427097, 8354: 2454853, 8355: 2463816, 8357: 2464000, 8363: 2464198}
[2025-04-19 18:04:14] 2025-04-19 16:03:54,669 | INFO     | --------------------------------------------------
[2025-04-19 18:04:14] 2025-04-19 16:03:54,669 | INFO     | 
[2025-04-19 18:04:14] 2025-04-19 16:03:54,669 | INFO     | executing command: ls -lF /scratch/boinc/var/slot96/slots/0
[2025-04-19 18:04:14] 2025-04-19 16:03:54,699 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-19 18:04:14] 2025-04-19 16:03:54,699 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-19 18:04:14] 2025-04-19 16:03:54,699 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-19 18:04:14] 2025-04-19 16:03:54,699 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-19 18:04:14] 2025-04-19 16:03:54,699 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-19 18:04:14] 2025-04-19 16:03:54,700 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-19 18:04:14] 2025-04-19 16:03:54,700 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-19 18:04:14] 2025-04-19 16:03:54,700 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-19 18:04:14] 2025-04-19 16:03:54,700 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-19 18:04:14] 2025-04-19 16:03:54,700 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-19 18:04:14] 2025-04-19 16:03:54,700 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-19 18:04:14] 2025-04-19 16:03:54,700 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-19 18:04:14] 2025-04-19 16:03:54,700 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-19 18:04:14] 2025-04-19 16:03:54,700 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-19 18:04:14] 2025-04-19 16:03:54,701 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-19 18:04:14] 2025-04-19 16:03:54,701 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-19 18:04:14] 2025-04-19 16:03:54,701 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-19 18:04:14] 2025-04-19 16:03:54,701 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-19 18:04:14] 2025-04-19 16:03:54,701 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-19 18:04:14] 2025-04-19 16:03:54,701 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-19 18:04:14] 2025-04-19 16:03:54,701 | INFO     | job 6605947095 has completed (purged errors)
[2025-04-19 18:04:14] 2025-04-19 16:03:54,701 | INFO     | overall cleanup function is called
[2025-04-19 18:04:14] 2025-04-19 16:03:55,308 | INFO     | number of running child processes to parent process 3555281: 1
[2025-04-19 18:04:14] 2025-04-19 16:03:55,308 | INFO     | maximum number of monitored processes: 6
[2025-04-19 18:04:14] 2025-04-19 16:03:55,308 | INFO     | aborting job monitoring since job object (job id=6605947095) has expired
[2025-04-19 18:04:14] 2025-04-19 16:03:55,712 | INFO     | --- collectZombieJob: --- 10, [3555281]
[2025-04-19 18:04:14] 2025-04-19 16:03:55,712 | INFO     | zombie collector waiting for pid 3555281
[2025-04-19 18:04:14] 2025-04-19 16:03:55,713 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-19 18:04:14] 2025-04-19 16:03:55,713 | INFO     | collected zombie processes
[2025-04-19 18:04:14] 2025-04-19 16:03:55,713 | INFO     | will attempt to kill all subprocesses of pid=3555281
[2025-04-19 18:04:14] 2025-04-19 16:03:56,339 | INFO     | process IDs to be killed: [3555281] (in reverse order)
[2025-04-19 18:04:14] 2025-04-19 16:03:56,533 | WARNING  | found no corresponding commands to process id(s)
[2025-04-19 18:04:14] 2025-04-19 16:03:56,534 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-19 18:04:14] 2025-04-19 16:03:56,556 | INFO     | did not find any defunct processes belonging to 3555281
[2025-04-19 18:04:14] 2025-04-19 16:03:56,573 | INFO     | did not find any defunct processes belonging to 3555281
[2025-04-19 18:04:14] 2025-04-19 16:03:56,573 | INFO     | ready for new job
[2025-04-19 18:04:14] 2025-04-19 16:03:56,573 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-19 18:04:14] 2025-04-19 16:03:56,575 | INFO     | **************************************
[2025-04-19 18:04:14] 2025-04-19 16:03:56,576 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-19 18:04:14] 2025-04-19 16:03:56,576 | INFO     | **************************************
[2025-04-19 18:04:14] 2025-04-19 16:03:56,576 | INFO     | 
[2025-04-19 18:04:14] 2025-04-19 16:03:56,584 | INFO     | architecture information:
[2025-04-19 18:04:14] 2025-04-19 16:03:56,584 | INFO     | executing command: cat /etc/os-release
[2025-04-19 18:04:14] 2025-04-19 16:03:56,609 | INFO     | cat /etc/os-release:
[2025-04-19 18:04:14] NAME="CentOS Linux"
[2025-04-19 18:04:14] VERSION="7 (Core)"
[2025-04-19 18:04:14] ID="centos"
[2025-04-19 18:04:14] ID_LIKE="rhel fedora"
[2025-04-19 18:04:14] VERSION_ID="7"
[2025-04-19 18:04:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-19 18:04:14] ANSI_COLOR="0;31"
[2025-04-19 18:04:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-19 18:04:14] HOME_URL="https://www.centos.org/"
[2025-04-19 18:04:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-19 18:04:14] 
[2025-04-19 18:04:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-19 18:04:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-19 18:04:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-19 18:04:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-19 18:04:14] 
[2025-04-19 18:04:14] 2025-04-19 16:03:56,609 | INFO     | **************************************
[2025-04-19 18:04:14] 2025-04-19 16:03:57,112 | INFO     | executing command: df -mP /scratch/boinc/var/slot96/slots/0
[2025-04-19 18:04:14] 2025-04-19 16:03:57,136 | INFO     | sufficient remaining disk space (3328082706432 B)
[2025-04-19 18:04:14] 2025-04-19 16:03:57,137 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-19 18:04:14] 2025-04-19 16:03:57,137 | INFO     | current server update state: UPDATING_FINAL
[2025-04-19 18:04:14] 2025-04-19 16:03:57,137 | INFO     | update_server=False
[2025-04-19 18:04:14] 2025-04-19 16:03:57,137 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-19 18:04:14] 2025-04-19 16:03:57,140 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-19 18:04:14] 2025-04-19 16:03:57,140 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-19 18:04:14] 2025-04-19 16:03:57,141 | INFO     | aborting loop
[2025-04-19 18:04:14] 2025-04-19 16:03:57,324 | INFO     | all data control threads have been joined
[2025-04-19 18:04:14] 2025-04-19 16:03:57,770 | INFO     | PID=3547964 has CPU usage=20.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-04-19 18:04:14] 2025-04-19 16:03:57,770 | INFO     | .. there are 24 such processes running
[2025-04-19 18:04:14] 2025-04-19 16:03:57,770 | INFO     | found 0 job(s) in 20 queues
[2025-04-19 18:04:14] 2025-04-19 16:03:57,770 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-19 18:04:14] 2025-04-19 16:03:57,770 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-19 18:04:14] 2025-04-19 16:03:58,145 | INFO     | [job] retrieve thread has finished
[2025-04-19 18:04:14] 2025-04-19 16:03:58,146 | INFO     | [job] job monitor thread has finished
[2025-04-19 18:04:14] 2025-04-19 16:03:58,329 | INFO     | [data] control thread has finished
[2025-04-19 18:04:14] 2025-04-19 16:03:58,354 | INFO     | [payload] validate_pre thread has finished
[2025-04-19 18:04:14] 2025-04-19 16:03:58,457 | INFO     | [payload] execute_payloads thread has finished
[2025-04-19 18:04:14] 2025-04-19 16:03:58,578 | INFO     | all payload control threads have been joined
[2025-04-19 18:04:14] 2025-04-19 16:03:58,586 | INFO     | all job control threads have been joined
[2025-04-19 18:04:14] 2025-04-19 16:03:58,611 | INFO     | [payload] failed_post thread has finished
[2025-04-19 18:04:14] 2025-04-19 16:03:59,146 | INFO     | [data] copytool_out thread has finished
[2025-04-19 18:04:14] 2025-04-19 16:03:59,284 | INFO     | [job] validate thread has finished
[2025-04-19 18:04:14] 2025-04-19 16:03:59,353 | INFO     | [payload] validate_post thread has finished
[2025-04-19 18:04:14] 2025-04-19 16:03:59,373 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-19 18:04:14] 2025-04-19 16:03:59,565 | INFO     | [job] create_data_payload thread has finished
[2025-04-19 18:04:14] 2025-04-19 16:03:59,580 | INFO     | [data] copytool_in thread has finished
[2025-04-19 18:04:14] 2025-04-19 16:03:59,581 | INFO     | [payload] control thread has finished
[2025-04-19 18:04:14] 2025-04-19 16:03:59,591 | INFO     | [job] control thread has finished
[2025-04-19 18:04:14] 2025-04-19 16:03:59,677 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-19 18:04:14] 2025-04-19 16:04:00,680 | INFO     | [job] queue monitor thread has finished
[2025-04-19 18:04:14] 2025-04-19 16:04:03,379 | INFO     | [data] queue_monitor thread has finished
[2025-04-19 18:04:14] 2025-04-19 16:04:07,808 | INFO     | job.realtimelogging is not enabled
[2025-04-19 18:04:14] 2025-04-19 16:04:08,813 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-19 18:04:14] 2025-04-19 16:04:09,317 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22388218398528)>', '<ExcThread(monitor, started 22387760248576)>']
[2025-04-19 18:04:14] 2025-04-19 16:04:09,825 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-19 18:04:14] 2025-04-19 16:04:09,826 | INFO     | [monitor] control thread has ended
[2025-04-19 18:04:14] 2025-04-19 16:04:14,342 | INFO     | all workflow threads have been joined
[2025-04-19 18:04:14] 2025-04-19 16:04:14,343 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-19 18:04:14] 2025-04-19 16:04:14,343 | INFO     | traces error code: 0
[2025-04-19 18:04:14] 2025-04-19 16:04:14,343 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-19 18:04:14] 2025-04-19 16:04:14,550 [wrapper] ==== pilot stdout END ====
[2025-04-19 18:04:14] 2025-04-19 16:04:14,554 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-19 18:04:14] 2025-04-19 16:04:14,557 [wrapper] pilotpid: 3547964
[2025-04-19 18:04:14] 2025-04-19 16:04:14,561 [wrapper] Pilot exit status: 0
[2025-04-19 18:04:14] 2025-04-19 16:04:14,574 [wrapper] pandaids: 6605947095
[2025-04-19 18:04:14] 2025-04-19 16:04:14,698 [wrapper] cleanup supervisor_pilot  229481 3547965
[2025-04-19 18:04:14] 2025-04-19 16:04:14,702 [wrapper] Test setup, not cleaning
[2025-04-19 18:04:14] 2025-04-19 16:04:14,705 [wrapper] apfmon messages muted
[2025-04-19 18:04:14] 2025-04-19 16:04:14,709 [wrapper] ==== wrapper stdout END ====
[2025-04-19 18:04:14] 2025-04-19 16:04:14,712 [wrapper] ==== wrapper stderr END ====
[2025-04-19 18:04:14]  *** Error codes and diagnostics ***
[2025-04-19 18:04:14]     "exeErrorCode": 0,
[2025-04-19 18:04:14]     "exeErrorDiag": "",
[2025-04-19 18:04:14]     "pilotErrorCode": 0,
[2025-04-19 18:04:14]     "pilotErrorDiag": "",
[2025-04-19 18:04:14]  *** Listing of results directory ***
[2025-04-19 18:04:14] total 422496
[2025-04-19 18:04:14] -rw-r--r-- 1 boinc boinc    495897 Apr 18 02:57 pilot3.tar.gz
[2025-04-19 18:04:14] -rwx------ 1 boinc boinc     37140 Apr 18 03:02 runpilot2-wrapper.sh
[2025-04-19 18:04:14] -rw-r--r-- 1 boinc boinc      5111 Apr 18 03:02 queuedata.json
[2025-04-19 18:04:14] -rw-r--r-- 1 boinc boinc       100 Apr 19 15:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-19 18:04:14] -rwxr-xr-x 1 boinc boinc      7986 Apr 19 15:43 run_atlas
[2025-04-19 18:04:14] -rw-r--r-- 1 boinc boinc       105 Apr 19 15:43 job.xml
[2025-04-19 18:04:14] -rw-r--r-- 2 boinc boinc 224635007 Apr 19 15:44 EVNT.44075481._002429.pool.root.1
[2025-04-19 18:04:14] -rw-r--r-- 1 boinc boinc      6675 Apr 19 15:44 init_data.xml
[2025-04-19 18:04:14] -rw-r--r-- 2 boinc boinc     17569 Apr 19 15:44 start_atlas.sh
[2025-04-19 18:04:14] drwxrwx--x 2 boinc boinc      4096 Apr 19 15:44 shared
[2025-04-19 18:04:14] -rw-r--r-- 2 boinc boinc    508892 Apr 19 15:44 input.tar.gz
[2025-04-19 18:04:14] -rw-r--r-- 1 boinc boinc         0 Apr 19 15:44 boinc_lockfile
[2025-04-19 18:04:14] -rw-r--r-- 1 boinc boinc      2579 Apr 19 15:44 pandaJob.out
[2025-04-19 18:04:14] -rw------- 1 boinc boinc       424 Apr 19 15:44 setup.sh.local
[2025-04-19 18:04:14] -rw------- 1 boinc boinc    991292 Apr 19 15:44 agis_schedconf.cvmfs.json
[2025-04-19 18:04:14] -rw------- 1 boinc boinc   1618536 Apr 19 15:44 agis_ddmendpoints.agis.ALL.json
[2025-04-19 18:04:14] drwx------ 4 boinc boinc      4096 Apr 19 15:44 pilot3
[2025-04-19 18:04:14] -rw------- 1 boinc boinc        95 Apr 19 18:03 pilot_heartbeat.json
[2025-04-19 18:04:14] -rw------- 1 boinc boinc 201991344 Apr 19 18:03 HITS.44075483._062482.pool.root.1
[2025-04-19 18:04:14] -rw-r--r-- 1 boinc boinc       529 Apr 19 18:03 boinc_task_state.xml
[2025-04-19 18:04:14] -rw------- 1 boinc boinc      1023 Apr 19 18:03 memory_monitor_summary.json
[2025-04-19 18:04:14] -rw------- 1 boinc boinc    289212 Apr 19 18:03 log.44075483._062482.job.log.tgz.1
[2025-04-19 18:04:14] -rw------- 1 boinc boinc      7692 Apr 19 18:03 heartbeat.json
[2025-04-19 18:04:14] -rw-r--r-- 1 boinc boinc      8192 Apr 19 18:04 boinc_mmap_file
[2025-04-19 18:04:14] -rw-r--r-- 1 boinc boinc        27 Apr 19 18:04 wrapper_checkpoint.txt
[2025-04-19 18:04:14] -rw------- 1 boinc boinc      4832 Apr 19 18:04 pilotlog.txt
[2025-04-19 18:04:14] -rw------- 1 boinc boinc    782306 Apr 19 18:04 log.44075483._062482.job.log.1
[2025-04-19 18:04:14] -rw------- 1 boinc boinc       357 Apr 19 18:04 output.list
[2025-04-19 18:04:14] -rw-r--r-- 1 boinc boinc       620 Apr 19 18:04 runtime_log
[2025-04-19 18:04:14] -rw------- 1 boinc boinc   1085440 Apr 19 18:04 result.tar.gz
[2025-04-19 18:04:14] -rw-r--r-- 1 boinc boinc     11423 Apr 19 18:04 runtime_log.err
[2025-04-19 18:04:14] -rw------- 1 boinc boinc       662 Apr 19 18:04 ZsdKDmEJpP7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmGb4KDmC5HfNm.diag
[2025-04-19 18:04:14] -rw-r--r-- 1 boinc boinc     21163 Apr 19 18:04 stderr.txt
[2025-04-19 18:04:14] HITS file was successfully produced:
[2025-04-19 18:04:14] -rw------- 1 boinc boinc 201991344 Apr 19 18:03 shared/HITS.pool.root.1
[2025-04-19 18:04:14]  *** Contents of shared directory: ***
[2025-04-19 18:04:14] total 418220
[2025-04-19 18:04:14] -rw-r--r-- 2 boinc boinc 224635007 Apr 19 15:44 ATLAS.root_0
[2025-04-19 18:04:14] -rw-r--r-- 2 boinc boinc     17569 Apr 19 15:44 start_atlas.sh
[2025-04-19 18:04:14] -rw-r--r-- 2 boinc boinc    508892 Apr 19 15:44 input.tar.gz
[2025-04-19 18:04:14] -rw------- 1 boinc boinc 201991344 Apr 19 18:03 HITS.pool.root.1
[2025-04-19 18:04:14] -rw------- 1 boinc boinc   1085440 Apr 19 18:04 result.tar.gz
18:04:15 (3544028): run_atlas exited; CPU time 30297.508470
18:04:15 (3544028): called boinc_finish(0)

</stderr_txt>
]]>

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