Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:22:17 (3625132): wrapper (7.7.26015): starting
13:22:17 (3625132): wrapper: running run_atlas (--nthreads 12)
[2025-04-18 13:22:17] Arguments: --nthreads 12
[2025-04-18 13:22:17] Threads: 12
[2025-04-18 13:22:17] Checking for CVMFS
[2025-04-18 13:22:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-18 13:22:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-18 13:22:18] Running cvmfs_config stat atlas.cern.ch
[2025-04-18 13:22:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-18 13:22:18] 2.11.5.0 2469 21804 335920 145014 1 179 28009316 45568000 14376 130560 0 146371818 99.703 163290328 28417 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-04-18 13:22:18] CVMFS is ok
[2025-04-18 13:22:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-18 13:22:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-18 13:22:18] Further information can be found at the LHC@home message board.
[2025-04-18 13:22:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-18 13:22:18] Checking for apptainer binary...
[2025-04-18 13:22:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-18 13:22:18] Running /usr/bin/apptainer --version
[2025-04-18 13:22:18] apptainer version 1.3.5-1.el9
[2025-04-18 13:22:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-18 13:22:18] WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0135.triumf.lcg
[2025-04-18 13:22:18] apptainer works
[2025-04-18 13:22:19] Set ATHENA_PROC_NUMBER=12
[2025-04-18 13:22:19] Set ATHENA_CORE_NUMBER=12
[2025-04-18 13:22:19] Starting ATLAS job with PandaID=6605947000
[2025-04-18 13:22:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-18 17:32:32]  *** The last 200 lines of the pilot log: ***
[2025-04-18 17:32:32] 2025-04-19 00:32:12,620 | INFO     | -- intersect: -23633119087.280903
[2025-04-18 17:32:32] 2025-04-19 00:32:12,620 | INFO     | intersect: -23633119087.280903
[2025-04-18 17:32:32] 2025-04-19 00:32:12,620 | INFO     | chi2: 6.098969159223175
[2025-04-18 17:32:32] 2025-04-19 00:32:12,621 | INFO     | sum of square deviations: 4233316245.054385
[2025-04-18 17:32:32] 2025-04-19 00:32:12,622 | INFO     | sum of deviations: 76560181682.76146
[2025-04-18 17:32:32] 2025-04-19 00:32:12,622 | INFO     | mean x: 1745015140.6401675
[2025-04-18 17:32:32] 2025-04-19 00:32:12,622 | INFO     | mean y: 2685838.9623430963
[2025-04-18 17:32:32] 2025-04-19 00:32:12,622 | INFO     | -- intersect: -31556183962.61669
[2025-04-18 17:32:32] 2025-04-19 00:32:12,622 | INFO     | intersect: -31556183962.61669
[2025-04-18 17:32:32] 2025-04-19 00:32:12,622 | INFO     | chi2: 5.440928468705735
[2025-04-18 17:32:32] 2025-04-19 00:32:12,622 | INFO     | current chi2=5.440928468705735 (change=10.789375603290553 %)
[2025-04-18 17:32:32] 2025-04-19 00:32:12,622 | INFO     | right removable region: 238
[2025-04-18 17:32:32] 2025-04-19 00:32:12,623 | INFO     | sum of square deviations: 4233251096.477006
[2025-04-18 17:32:32] 2025-04-19 00:32:12,624 | INFO     | sum of deviations: -7079582824.962355
[2025-04-18 17:32:32] 2025-04-19 00:32:12,624 | INFO     | mean x: 1745015445.6485355
[2025-04-18 17:32:32] 2025-04-19 00:32:12,624 | INFO     | mean y: 2715430.3933054395
[2025-04-18 17:32:32] 2025-04-19 00:32:12,624 | INFO     | -- intersect: 2921035439.4729996
[2025-04-18 17:32:32] 2025-04-19 00:32:12,624 | INFO     | intersect: 2921035439.4729996
[2025-04-18 17:32:32] 2025-04-19 00:32:12,624 | INFO     | chi2: 3.2663222661282156
[2025-04-18 17:32:32] 2025-04-19 00:32:12,624 | INFO     | current chi2=3.2663222661282156 (change=46.44468301354312 %)
[2025-04-18 17:32:32] 2025-04-19 00:32:12,625 | INFO     | sum of square deviations: 3973040801.829052
[2025-04-18 17:32:32] 2025-04-19 00:32:12,626 | INFO     | sum of deviations: -54860681289.52138
[2025-04-18 17:32:32] 2025-04-19 00:32:12,626 | INFO     | mean x: 1745015598.162393
[2025-04-18 17:32:32] 2025-04-19 00:32:12,626 | INFO     | mean y: 2743429.6452991455
[2025-04-18 17:32:32] 2025-04-19 00:32:12,626 | INFO     | -- intersect: 24098328990.195915
[2025-04-18 17:32:32] 2025-04-19 00:32:12,626 | INFO     | intersect: 24098328990.195915
[2025-04-18 17:32:32] 2025-04-19 00:32:12,626 | INFO     | chi2: 1.9198230501918376
[2025-04-18 17:32:32] 2025-04-19 00:32:12,626 | INFO     | current chi2=1.9198230501918376 (change=41.223709916794924 %)
[2025-04-18 17:32:32] 2025-04-19 00:32:12,627 | INFO     | sum of square deviations: 3723714432.087321
[2025-04-18 17:32:32] 2025-04-19 00:32:12,628 | INFO     | sum of deviations: -89424589470.35374
[2025-04-18 17:32:32] 2025-04-19 00:32:12,628 | INFO     | mean x: 1745015750.6768558
[2025-04-18 17:32:32] 2025-04-19 00:32:12,628 | INFO     | mean y: 2764479.0087336246
[2025-04-18 17:32:32] 2025-04-19 00:32:12,628 | INFO     | -- intersect: 41909124370.33557
[2025-04-18 17:32:32] 2025-04-19 00:32:12,628 | INFO     | intersect: 41909124370.33557
[2025-04-18 17:32:32] 2025-04-19 00:32:12,628 | INFO     | chi2: 1.0677869724147784
[2025-04-18 17:32:32] 2025-04-19 00:32:12,628 | INFO     | current chi2=1.0677869724147784 (change=44.38096926130353 %)
[2025-04-18 17:32:32] 2025-04-19 00:32:12,629 | INFO     | sum of square deviations: 3485080966.8571367
[2025-04-18 17:32:32] 2025-04-19 00:32:12,630 | INFO     | sum of deviations: -86562823342.14285
[2025-04-18 17:32:32] 2025-04-19 00:32:12,630 | INFO     | mean x: 1745015903.1785715
[2025-04-18 17:32:32] 2025-04-19 00:32:12,630 | INFO     | mean y: 2762598.5535714286
[2025-04-18 17:32:32] 2025-04-19 00:32:12,630 | INFO     | -- intersect: 43345659016.91063
[2025-04-18 17:32:32] 2025-04-19 00:32:12,630 | INFO     | intersect: 43345659016.91063
[2025-04-18 17:32:32] 2025-04-19 00:32:12,630 | INFO     | chi2: 1.0395696996450985
[2025-04-18 17:32:32] 2025-04-19 00:32:12,630 | INFO     | current chi2=1.0395696996450985 (change=2.6425938411542056 %)
[2025-04-18 17:32:32] 2025-04-19 00:32:12,630 | INFO     | left removable region: 40
[2025-04-18 17:32:32] 2025-04-19 00:32:12,630 | INFO     | sum of square deviations: 2406818330.772728
[2025-04-18 17:32:32] 2025-04-19 00:32:12,631 | INFO     | sum of deviations: -25550328068.181828
[2025-04-18 17:32:32] 2025-04-19 00:32:12,631 | INFO     | mean x: 1745016330.2272727
[2025-04-18 17:32:32] 2025-04-19 00:32:12,632 | INFO     | mean y: 2741012.0707070706
[2025-04-18 17:32:32] 2025-04-19 00:32:12,632 | INFO     | -- intersect: 18527504244.75181
[2025-04-18 17:32:32] 2025-04-19 00:32:12,632 | INFO     | intersect: 18527504244.75181
[2025-04-18 17:32:32] 2025-04-19 00:32:12,632 | INFO     | chi2: 0.1890636663413527
[2025-04-18 17:32:32] 2025-04-19 00:32:12,632 | INFO     | -- intersect: 18527504244.75181
[2025-04-18 17:32:32] 2025-04-19 00:32:12,632 | INFO     | current memory leak: -10.62 B/s (using 198 data points, chi2=0.19)
[2025-04-18 17:32:32] 2025-04-19 00:32:12,632 | INFO     | ..............................
[2025-04-18 17:32:32] 2025-04-19 00:32:12,633 | INFO     | . Timing measurements:
[2025-04-18 17:32:32] 2025-04-19 00:32:12,633 | INFO     | . get job = 0 s
[2025-04-18 17:32:32] 2025-04-19 00:32:12,633 | INFO     | . initial setup = 5 s
[2025-04-18 17:32:32] 2025-04-19 00:32:12,633 | INFO     | . payload setup = 25 s
[2025-04-18 17:32:32] 2025-04-19 00:32:12,633 | INFO     | . stage-in = 0 s
[2025-04-18 17:32:32] 2025-04-19 00:32:12,633 | INFO     | . payload execution = 14853 s
[2025-04-18 17:32:32] 2025-04-19 00:32:12,633 | INFO     | . stage-out = 2 s
[2025-04-18 17:32:32] 2025-04-19 00:32:12,633 | INFO     | . log creation = 0 s
[2025-04-18 17:32:32] 2025-04-19 00:32:12,633 | INFO     | ..............................
[2025-04-18 17:32:32] 2025-04-19 00:32:12,701 | INFO     | 
[2025-04-18 17:32:32] 2025-04-19 00:32:12,701 | INFO     | job summary report
[2025-04-18 17:32:32] 2025-04-19 00:32:12,701 | INFO     | --------------------------------------------------
[2025-04-18 17:32:32] 2025-04-19 00:32:12,701 | INFO     | PanDA job id: 6605947000
[2025-04-18 17:32:32] 2025-04-19 00:32:12,701 | INFO     | task id: 44075483
[2025-04-18 17:32:32] 2025-04-19 00:32:12,701 | INFO     | errors: (none)
[2025-04-18 17:32:32] 2025-04-19 00:32:12,701 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-18 17:32:32] 2025-04-19 00:32:12,701 | INFO     | pilot state: finished 
[2025-04-18 17:32:32] 2025-04-19 00:32:12,702 | INFO     | transexitcode: 0
[2025-04-18 17:32:32] 2025-04-19 00:32:12,702 | INFO     | exeerrorcode: 0
[2025-04-18 17:32:32] 2025-04-19 00:32:12,702 | INFO     | exeerrordiag: 
[2025-04-18 17:32:32] 2025-04-19 00:32:12,702 | INFO     | exitcode: 0
[2025-04-18 17:32:32] 2025-04-19 00:32:12,702 | INFO     | exitmsg: OK
[2025-04-18 17:32:32] 2025-04-19 00:32:12,702 | INFO     | cpuconsumptiontime: 34748 s
[2025-04-18 17:32:32] 2025-04-19 00:32:12,702 | INFO     | nevents: 400
[2025-04-18 17:32:32] 2025-04-19 00:32:12,702 | INFO     | neventsw: 0
[2025-04-18 17:32:32] 2025-04-19 00:32:12,702 | INFO     | pid: 3637018
[2025-04-18 17:32:32] 2025-04-19 00:32:12,702 | INFO     | pgrp: 3637018
[2025-04-18 17:32:32] 2025-04-19 00:32:12,702 | INFO     | corecount: 12
[2025-04-18 17:32:32] 2025-04-19 00:32:12,702 | INFO     | event service: False
[2025-04-18 17:32:32] 2025-04-19 00:32:12,702 | INFO     | sizes: {0: 2426591, 1: 2426846, 2: 2426874, 13: 2426874, 24: 2426930, 27: 2427164, 35: 2427320, 14879: 2457893, 14882: 2466828, 14885: 2466884, 14891: 2467054}
[2025-04-18 17:32:32] 2025-04-19 00:32:12,702 | INFO     | --------------------------------------------------
[2025-04-18 17:32:32] 2025-04-19 00:32:12,702 | INFO     | 
[2025-04-18 17:32:32] 2025-04-19 00:32:12,702 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-04-18 17:32:32] 2025-04-19 00:32:12,723 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-18 17:32:32] 2025-04-19 00:32:12,723 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-18 17:32:32] 2025-04-19 00:32:12,724 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-18 17:32:32] 2025-04-19 00:32:12,724 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-18 17:32:32] 2025-04-19 00:32:12,724 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-18 17:32:32] 2025-04-19 00:32:12,724 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-18 17:32:32] 2025-04-19 00:32:12,724 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-18 17:32:32] 2025-04-19 00:32:12,724 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-18 17:32:32] 2025-04-19 00:32:12,724 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-18 17:32:32] 2025-04-19 00:32:12,724 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-18 17:32:32] 2025-04-19 00:32:12,724 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-18 17:32:32] 2025-04-19 00:32:12,724 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-18 17:32:32] 2025-04-19 00:32:12,724 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-18 17:32:32] 2025-04-19 00:32:12,724 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-18 17:32:32] 2025-04-19 00:32:12,724 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-18 17:32:32] 2025-04-19 00:32:12,724 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-18 17:32:32] 2025-04-19 00:32:12,724 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-18 17:32:32] 2025-04-19 00:32:12,725 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-18 17:32:32] 2025-04-19 00:32:12,725 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-18 17:32:32] 2025-04-19 00:32:12,725 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-18 17:32:32] 2025-04-19 00:32:12,725 | INFO     | job 6605947000 has completed (purged errors)
[2025-04-18 17:32:32] 2025-04-19 00:32:12,725 | INFO     | overall cleanup function is called
[2025-04-18 17:32:32] 2025-04-19 00:32:13,731 | INFO     | --- collectZombieJob: --- 10, [3637018]
[2025-04-18 17:32:32] 2025-04-19 00:32:13,731 | INFO     | zombie collector waiting for pid 3637018
[2025-04-18 17:32:32] 2025-04-19 00:32:13,731 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-18 17:32:32] 2025-04-19 00:32:13,731 | INFO     | collected zombie processes
[2025-04-18 17:32:32] 2025-04-19 00:32:13,731 | INFO     | will attempt to kill all subprocesses of pid=3637018
[2025-04-18 17:32:32] 2025-04-19 00:32:13,925 | INFO     | process IDs to be killed: [3637018] (in reverse order)
[2025-04-18 17:32:32] 2025-04-19 00:32:14,002 | WARNING  | found no corresponding commands to process id(s)
[2025-04-18 17:32:32] 2025-04-19 00:32:14,003 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-18 17:32:32] 2025-04-19 00:32:14,013 | INFO     | did not find any defunct processes belonging to 3637018
[2025-04-18 17:32:32] 2025-04-19 00:32:14,019 | INFO     | did not find any defunct processes belonging to 3637018
[2025-04-18 17:32:32] 2025-04-19 00:32:14,019 | INFO     | ready for new job
[2025-04-18 17:32:32] 2025-04-19 00:32:14,019 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-18 17:32:32] 2025-04-19 00:32:14,021 | INFO     | **************************************
[2025-04-18 17:32:32] 2025-04-19 00:32:14,021 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-18 17:32:32] 2025-04-19 00:32:14,021 | INFO     | **************************************
[2025-04-18 17:32:32] 2025-04-19 00:32:14,021 | INFO     | 
[2025-04-18 17:32:32] 2025-04-19 00:32:14,024 | INFO     | architecture information:
[2025-04-18 17:32:32] 2025-04-19 00:32:14,024 | INFO     | executing command: cat /etc/os-release
[2025-04-18 17:32:32] 2025-04-19 00:32:14,041 | INFO     | cat /etc/os-release:
[2025-04-18 17:32:32] NAME="CentOS Linux"
[2025-04-18 17:32:32] VERSION="7 (Core)"
[2025-04-18 17:32:32] ID="centos"
[2025-04-18 17:32:32] ID_LIKE="rhel fedora"
[2025-04-18 17:32:32] VERSION_ID="7"
[2025-04-18 17:32:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-18 17:32:32] ANSI_COLOR="0;31"
[2025-04-18 17:32:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-18 17:32:32] HOME_URL="https://www.centos.org/"
[2025-04-18 17:32:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-18 17:32:32] 
[2025-04-18 17:32:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-18 17:32:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-18 17:32:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-18 17:32:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-18 17:32:32] 
[2025-04-18 17:32:32] 2025-04-19 00:32:14,042 | INFO     | **************************************
[2025-04-18 17:32:32] 2025-04-19 00:32:14,545 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-04-18 17:32:32] 2025-04-19 00:32:14,564 | INFO     | sufficient remaining disk space (2075655143424 B)
[2025-04-18 17:32:32] 2025-04-19 00:32:14,564 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-18 17:32:32] 2025-04-19 00:32:14,564 | INFO     | current server update state: UPDATING_FINAL
[2025-04-18 17:32:32] 2025-04-19 00:32:14,565 | INFO     | update_server=False
[2025-04-18 17:32:32] 2025-04-19 00:32:14,565 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-18 17:32:32] 2025-04-19 00:32:14,565 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-18 17:32:32] 2025-04-19 00:32:14,565 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-18 17:32:32] 2025-04-19 00:32:14,565 | INFO     | found 0 job(s) in 20 queues
[2025-04-18 17:32:32] 2025-04-19 00:32:14,566 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-18 17:32:32] 2025-04-19 00:32:14,566 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-18 17:32:32] 2025-04-19 00:32:14,566 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-18 17:32:32] 2025-04-19 00:32:14,945 | INFO     | all data control threads have been joined
[2025-04-18 17:32:32] 2025-04-19 00:32:15,052 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-04-18 17:32:32] 2025-04-19 00:32:15,053 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-04-18 17:32:32] 2025-04-19 00:32:15,053 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-18 17:32:32] 2025-04-19 00:32:15,053 | INFO     | will abort loop
[2025-04-18 17:32:32] 2025-04-19 00:32:15,103 | INFO     | all job control threads have been joined
[2025-04-18 17:32:32] 2025-04-19 00:32:15,134 | INFO     | all payload control threads have been joined
[2025-04-18 17:32:32] 2025-04-19 00:32:15,570 | INFO     | [job] retrieve thread has finished
[2025-04-18 17:32:32] 2025-04-19 00:32:15,571 | INFO     | [job] queue monitor thread has finished
[2025-04-18 17:32:32] 2025-04-19 00:32:15,689 | INFO     | [job] create_data_payload thread has finished
[2025-04-18 17:32:32] 2025-04-19 00:32:15,716 | INFO     | [payload] validate_pre thread has finished
[2025-04-18 17:32:32] 2025-04-19 00:32:15,736 | INFO     | [data] copytool_in thread has finished
[2025-04-18 17:32:32] 2025-04-19 00:32:15,950 | INFO     | [data] control thread has finished
[2025-04-18 17:32:32] 2025-04-19 00:32:16,058 | INFO     | [job] job monitor thread has finished
[2025-04-18 17:32:32] 2025-04-19 00:32:16,109 | INFO     | [job] control thread has finished
[2025-04-18 17:32:32] 2025-04-19 00:32:16,140 | INFO     | [payload] control thread has finished
[2025-04-18 17:32:32] 2025-04-19 00:32:16,437 | INFO     | [payload] failed_post thread has finished
[2025-04-18 17:32:32] 2025-04-19 00:32:16,453 | INFO     | [payload] validate_post thread has finished
[2025-04-18 17:32:32] 2025-04-19 00:32:16,576 | INFO     | [data] copytool_out thread has finished
[2025-04-18 17:32:32] 2025-04-19 00:32:16,805 | INFO     | [payload] execute_payloads thread has finished
[2025-04-18 17:32:32] 2025-04-19 00:32:16,864 | INFO     | [job] validate thread has finished
[2025-04-18 17:32:32] 2025-04-19 00:32:17,543 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-18 17:32:32] 2025-04-19 00:32:21,547 | INFO     | [data] queue_monitor thread has finished
[2025-04-18 17:32:32] 2025-04-19 00:32:24,766 | INFO     | job.realtimelogging is not enabled
[2025-04-18 17:32:32] 2025-04-19 00:32:25,772 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-18 17:32:32] 2025-04-19 00:32:27,565 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140206231508800)>', '<ExcThread(monitor, started 140205835147008)>']
[2025-04-18 17:32:32] 2025-04-19 00:32:27,633 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-18 17:32:32] 2025-04-19 00:32:27,634 | INFO     | [monitor] control thread has ended
[2025-04-18 17:32:32] 2025-04-19 00:32:32,591 | INFO     | all workflow threads have been joined
[2025-04-18 17:32:32] 2025-04-19 00:32:32,591 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-18 17:32:32] 2025-04-19 00:32:32,592 | INFO     | traces error code: 0
[2025-04-18 17:32:32] 2025-04-19 00:32:32,592 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-18 17:32:32] 2025-04-19 00:32:32,692 [wrapper] ==== pilot stdout END ====
[2025-04-18 17:32:32] 2025-04-19 00:32:32,697 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-18 17:32:32] 2025-04-19 00:32:32,700 [wrapper] pilotpid: 3630612
[2025-04-18 17:32:32] 2025-04-19 00:32:32,703 [wrapper] Pilot exit status: 0
[2025-04-18 17:32:32] 2025-04-19 00:32:32,714 [wrapper] pandaids: 6605947000
[2025-04-18 17:32:32] 2025-04-19 00:32:32,766 [wrapper] cleanup supervisor_pilot 4126564 3630613
[2025-04-18 17:32:32] 2025-04-19 00:32:32,769 [wrapper] Test setup, not cleaning
[2025-04-18 17:32:32] 2025-04-19 00:32:32,771 [wrapper] apfmon messages muted
[2025-04-18 17:32:32] 2025-04-19 00:32:32,773 [wrapper] ==== wrapper stdout END ====
[2025-04-18 17:32:32] 2025-04-19 00:32:32,776 [wrapper] ==== wrapper stderr END ====
[2025-04-18 17:32:32]  *** Error codes and diagnostics ***
[2025-04-18 17:32:32]     "exeErrorCode": 0,
[2025-04-18 17:32:32]     "exeErrorDiag": "",
[2025-04-18 17:32:32]     "pilotErrorCode": 0,
[2025-04-18 17:32:32]     "pilotErrorDiag": "",
[2025-04-18 17:32:32]  *** Listing of results directory ***
[2025-04-18 17:32:32] total 417764
[2025-04-18 17:32:32] -rw-r--r--. 1 boinc boinc    495897 Apr 17 17:41 pilot3.tar.gz
[2025-04-18 17:32:32] -rw-r--r--. 1 boinc boinc      5111 Apr 17 17:53 queuedata.json
[2025-04-18 17:32:32] -rwx------. 1 boinc boinc     37140 Apr 17 17:54 runpilot2-wrapper.sh
[2025-04-18 17:32:32] -rw-r--r--. 1 boinc boinc       100 Apr 18 13:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-18 17:32:32] -rwxr-xr-x. 1 boinc boinc      7986 Apr 18 13:22 run_atlas
[2025-04-18 17:32:32] -rw-r--r--. 1 boinc boinc       105 Apr 18 13:22 job.xml
[2025-04-18 17:32:32] -rw-r--r--. 2 boinc boinc 223105981 Apr 18 13:22 EVNT.44075481._002426.pool.root.1
[2025-04-18 17:32:32] -rw-r--r--. 1 boinc boinc      6598 Apr 18 13:22 init_data.xml
[2025-04-18 17:32:32] -rw-r--r--. 2 boinc boinc     17569 Apr 18 13:22 start_atlas.sh
[2025-04-18 17:32:32] drwxrwx--x. 2 boinc boinc      4096 Apr 18 13:22 shared
[2025-04-18 17:32:32] -rw-r--r--. 2 boinc boinc    508894 Apr 18 13:22 input.tar.gz
[2025-04-18 17:32:32] -rw-r--r--. 1 boinc boinc         0 Apr 18 13:22 boinc_lockfile
[2025-04-18 17:32:32] -rw-r--r--. 1 boinc boinc      2577 Apr 18 13:22 pandaJob.out
[2025-04-18 17:32:32] -rw-------. 1 boinc boinc       424 Apr 18 13:22 setup.sh.local
[2025-04-18 17:32:32] -rw-------. 1 boinc boinc    991292 Apr 18 13:22 agis_schedconf.cvmfs.json
[2025-04-18 17:32:32] drwx------. 4 boinc boinc      4096 Apr 18 13:23 pilot3
[2025-04-18 17:32:32] -rw-------. 1 boinc boinc 197463084 Apr 18 17:31 HITS.44075483._062387.pool.root.1
[2025-04-18 17:32:32] -rw-r--r--. 1 boinc boinc       530 Apr 18 17:31 boinc_task_state.xml
[2025-04-18 17:32:32] -rw-------. 1 boinc boinc      1039 Apr 18 17:32 memory_monitor_summary.json
[2025-04-18 17:32:32] -rw-------. 1 boinc boinc   1618536 Apr 18 17:32 agis_ddmendpoints.agis.ALL.json
[2025-04-18 17:32:32] -rw-------. 1 boinc boinc    440081 Apr 18 17:32 log.44075483._062387.job.log.tgz.1
[2025-04-18 17:32:32] -rw-------. 1 boinc boinc      7733 Apr 18 17:32 heartbeat.json
[2025-04-18 17:32:32] -rw-------. 1 boinc boinc        95 Apr 18 17:32 pilot_heartbeat.json
[2025-04-18 17:32:32] -rw-r--r--. 1 boinc boinc      8192 Apr 18 17:32 boinc_mmap_file
[2025-04-18 17:32:32] -rw-r--r--. 1 boinc boinc        28 Apr 18 17:32 wrapper_checkpoint.txt
[2025-04-18 17:32:32] -rw-------. 1 boinc boinc      4733 Apr 18 17:32 pilotlog.txt
[2025-04-18 17:32:32] -rw-------. 1 boinc boinc   1236149 Apr 18 17:32 log.44075483._062387.job.log.1
[2025-04-18 17:32:32] -rw-------. 1 boinc boinc       357 Apr 18 17:32 output.list
[2025-04-18 17:32:32] -rw-r--r--. 1 boinc boinc       620 Apr 18 17:32 runtime_log
[2025-04-18 17:32:32] -rw-------. 1 boinc boinc   1699840 Apr 18 17:32 result.tar.gz
[2025-04-18 17:32:32] -rw-r--r--. 1 boinc boinc     11145 Apr 18 17:32 runtime_log.err
[2025-04-18 17:32:32] -rw-------. 1 boinc boinc       662 Apr 18 17:32 4lMMDmGBpP7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmqa4KDmBigUlm.diag
[2025-04-18 17:32:32] -rw-r--r--. 1 boinc boinc     21104 Apr 18 17:32 stderr.txt
[2025-04-18 17:32:32] HITS file was successfully produced:
[2025-04-18 17:32:32] -rw-------. 1 boinc boinc 197463084 Apr 18 17:31 shared/HITS.pool.root.1
[2025-04-18 17:32:32]  *** Contents of shared directory: ***
[2025-04-18 17:32:32] total 412900
[2025-04-18 17:32:32] -rw-r--r--. 2 boinc boinc 223105981 Apr 18 13:22 ATLAS.root_0
[2025-04-18 17:32:32] -rw-r--r--. 2 boinc boinc     17569 Apr 18 13:22 start_atlas.sh
[2025-04-18 17:32:32] -rw-r--r--. 2 boinc boinc    508894 Apr 18 13:22 input.tar.gz
[2025-04-18 17:32:32] -rw-------. 1 boinc boinc 197463084 Apr 18 17:31 HITS.pool.root.1
[2025-04-18 17:32:32] -rw-------. 1 boinc boinc   1699840 Apr 18 17:32 result.tar.gz
17:32:34 (3625132): run_atlas exited; CPU time 34987.136412
17:32:34 (3625132): called boinc_finish(0)

</stderr_txt>
]]>

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