Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
01:01:05 (788506): wrapper (7.7.26015): starting
01:01:05 (788506): wrapper: running run_atlas (--nthreads 4)
[2025-04-19 01:01:05] Arguments: --nthreads 4
[2025-04-19 01:01:05] Threads: 4
[2025-04-19 01:01:05] Checking for CVMFS
[2025-04-19 01:01:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-19 01:01:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-19 01:01:05] Running cvmfs_config stat atlas.cern.ch
[2025-04-19 01:01:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-19 01:01:05] 2.12.7.0 14133 881 92372 145018 3 187 4920690 6144000 1832 130560 0 2147024 99.9967 234828 13527 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.46:3128 1
[2025-04-19 01:01:05] CVMFS is ok
[2025-04-19 01:01:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-19 01:01:05] Checking for apptainer binary...
[2025-04-19 01:01:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-19 01:01:05] Running /usr/bin/apptainer --version
[2025-04-19 01:01:05] apptainer version 1.4.0
[2025-04-19 01:01:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-19 01:01:05] Ryzen5
[2025-04-19 01:01:05] apptainer works
[2025-04-19 01:01:05] Set ATHENA_PROC_NUMBER=4
[2025-04-19 01:01:05] Set ATHENA_CORE_NUMBER=4
[2025-04-19 01:01:06] Starting ATLAS job with PandaID=6605946816
[2025-04-19 01:01:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc2/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-19 02:53:08]  *** The last 200 lines of the pilot log: ***
[2025-04-19 02:53:08] 2025-04-19 00:52:53,254 | INFO     | total number of processed events: 400 (read)
[2025-04-19 02:53:08] 2025-04-19 00:52:53,255 | INFO     | executing command: lscpu
[2025-04-19 02:53:08] 2025-04-19 00:52:53,268 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-19 02:53:08] 2025-04-19 00:52:54,511 | WARNING  | process 798736 can no longer be monitored (due to stat problems) - aborting
[2025-04-19 02:53:08] 2025-04-19 00:52:54,511 | INFO     | using path: /var/lib/boinc2/slots/0/PanDA_Pilot-6605946816/memory_monitor_summary.json (trf name=prmon)
[2025-04-19 02:53:08] 2025-04-19 00:52:54,555 | INFO     | number of running child processes to parent process 798736: 1
[2025-04-19 02:53:08] 2025-04-19 00:52:54,555 | INFO     | maximum number of monitored processes: 6
[2025-04-19 02:53:08] 2025-04-19 00:52:54,798 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-19 02:53:08] 2025-04-19 00:52:54,798 | INFO     | using path: /var/lib/boinc2/slots/0/PanDA_Pilot-6605946816/memory_monitor_summary.json (trf name=prmon)
[2025-04-19 02:53:08] 2025-04-19 00:52:54,799 | INFO     | extracted standard info from prmon json
[2025-04-19 02:53:08] 2025-04-19 00:52:54,799 | INFO     | extracted standard memory fields from prmon json
[2025-04-19 02:53:08] 2025-04-19 00:52:54,799 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-19 02:53:08] 2025-04-19 00:52:54,799 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-19 02:53:08] 2025-04-19 00:52:54,799 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-19 02:53:08] 2025-04-19 00:52:54,800 | INFO     | fitting pss+swap vs Time
[2025-04-19 02:53:08] 2025-04-19 00:52:54,800 | INFO     | sum of square deviations: 412686807.5
[2025-04-19 02:53:08] 2025-04-19 00:52:54,800 | INFO     | sum of deviations: 18513393555.000008
[2025-04-19 02:53:08] 2025-04-19 00:52:54,800 | INFO     | mean x: 1745020615.5
[2025-04-19 02:53:08] 2025-04-19 00:52:54,800 | INFO     | mean y: 2309406.1454545455
[2025-04-19 02:53:08] 2025-04-19 00:52:54,800 | INFO     | -- intersect: -78280429051.2496
[2025-04-19 02:53:08] 2025-04-19 00:52:54,800 | INFO     | intersect: -78280429051.2496
[2025-04-19 02:53:08] 2025-04-19 00:52:54,800 | INFO     | chi2: 1.9716038626850685
[2025-04-19 02:53:08] 2025-04-19 00:52:54,801 | INFO     | sum of square deviations: 358927660.0
[2025-04-19 02:53:08] 2025-04-19 00:52:54,801 | INFO     | sum of deviations: 17593172565.0
[2025-04-19 02:53:08] 2025-04-19 00:52:54,801 | INFO     | mean x: 1745020463.0
[2025-04-19 02:53:08] 2025-04-19 00:52:54,801 | INFO     | mean y: 2306795.285714286
[2025-04-19 02:53:08] 2025-04-19 00:52:54,801 | INFO     | -- intersect: -85531491672.67075
[2025-04-19 02:53:08] 2025-04-19 00:52:54,801 | INFO     | intersect: -85531491672.67075
[2025-04-19 02:53:08] 2025-04-19 00:52:54,801 | INFO     | chi2: 1.9759040045497012
[2025-04-19 02:53:08] 2025-04-19 00:52:54,801 | INFO     | current chi2=1.9759040045497012 (change=-0.21810374518015213 %)
[2025-04-19 02:53:08] 2025-04-19 00:52:54,801 | INFO     | right removable region: 104
[2025-04-19 02:53:08] 2025-04-19 00:52:54,801 | INFO     | sum of square deviations: 358927660.0
[2025-04-19 02:53:08] 2025-04-19 00:52:54,801 | INFO     | sum of deviations: -2241827958.0000014
[2025-04-19 02:53:08] 2025-04-19 00:52:54,801 | INFO     | mean x: 1745020768.0
[2025-04-19 02:53:08] 2025-04-19 00:52:54,801 | INFO     | mean y: 2367579.466666667
[2025-04-19 02:53:08] 2025-04-19 00:52:54,802 | INFO     | -- intersect: 10901600993.222057
[2025-04-19 02:53:08] 2025-04-19 00:52:54,802 | INFO     | intersect: 10901600993.222057
[2025-04-19 02:53:08] 2025-04-19 00:52:54,802 | INFO     | chi2: 0.029039883343790627
[2025-04-19 02:53:08] 2025-04-19 00:52:54,802 | INFO     | current chi2=0.029039883343790627 (change=98.52709340383204 %)
[2025-04-19 02:53:08] 2025-04-19 00:52:54,802 | INFO     | sum of square deviations: 310052325.0
[2025-04-19 02:53:08] 2025-04-19 00:52:54,802 | INFO     | sum of deviations: -1411529508.0
[2025-04-19 02:53:08] 2025-04-19 00:52:54,802 | INFO     | mean x: 1745020920.5
[2025-04-19 02:53:08] 2025-04-19 00:52:54,802 | INFO     | mean y: 2364900.66
[2025-04-19 02:53:08] 2025-04-19 00:52:54,802 | INFO     | -- intersect: 7946664371.283457
[2025-04-19 02:53:08] 2025-04-19 00:52:54,802 | INFO     | intersect: 7946664371.283457
[2025-04-19 02:53:08] 2025-04-19 00:52:54,802 | INFO     | chi2: 0.02356117414538267
[2025-04-19 02:53:08] 2025-04-19 00:52:54,802 | INFO     | current chi2=0.02356117414538267 (change=18.86615429389949 %)
[2025-04-19 02:53:08] 2025-04-19 00:52:54,802 | INFO     | left removable region: 20
[2025-04-19 02:53:08] 2025-04-19 00:52:54,802 | INFO     | sum of square deviations: 183761585.0
[2025-04-19 02:53:08] 2025-04-19 00:52:54,802 | INFO     | sum of deviations: 788115424.9999999
[2025-04-19 02:53:08] 2025-04-19 00:52:54,802 | INFO     | mean x: 1745021042.5
[2025-04-19 02:53:08] 2025-04-19 00:52:54,803 | INFO     | mean y: 2356470.6666666665
[2025-04-19 02:53:08] 2025-04-19 00:52:54,803 | INFO     | -- intersect: -7481677804.200033
[2025-04-19 02:53:08] 2025-04-19 00:52:54,803 | INFO     | intersect: -7481677804.200033
[2025-04-19 02:53:08] 2025-04-19 00:52:54,803 | INFO     | chi2: 0.000852064883811123
[2025-04-19 02:53:08] 2025-04-19 00:52:54,803 | INFO     | -- intersect: -7481677804.200033
[2025-04-19 02:53:08] 2025-04-19 00:52:54,803 | INFO     | current memory leak: 4.29 B/s (using 84 data points, chi2=0.00)
[2025-04-19 02:53:08] 2025-04-19 00:52:54,803 | INFO     | ..............................
[2025-04-19 02:53:08] 2025-04-19 00:52:54,803 | INFO     | . Timing measurements:
[2025-04-19 02:53:08] 2025-04-19 00:52:54,803 | INFO     | . get job = 0 s
[2025-04-19 02:53:08] 2025-04-19 00:52:54,803 | INFO     | . initial setup = 1 s
[2025-04-19 02:53:08] 2025-04-19 00:52:54,803 | INFO     | . payload setup = 3 s
[2025-04-19 02:53:08] 2025-04-19 00:52:54,803 | INFO     | . stage-in = 0 s
[2025-04-19 02:53:08] 2025-04-19 00:52:54,803 | INFO     | . payload execution = 6680 s
[2025-04-19 02:53:08] 2025-04-19 00:52:54,803 | INFO     | . stage-out = 0 s
[2025-04-19 02:53:08] 2025-04-19 00:52:54,803 | INFO     | . log creation = 0 s
[2025-04-19 02:53:08] 2025-04-19 00:52:54,803 | INFO     | ..............................
[2025-04-19 02:53:08] 2025-04-19 00:52:54,836 | INFO     | 
[2025-04-19 02:53:08] 2025-04-19 00:52:54,836 | INFO     | job summary report
[2025-04-19 02:53:08] 2025-04-19 00:52:54,836 | INFO     | --------------------------------------------------
[2025-04-19 02:53:08] 2025-04-19 00:52:54,836 | INFO     | PanDA job id: 6605946816
[2025-04-19 02:53:08] 2025-04-19 00:52:54,836 | INFO     | task id: 44075483
[2025-04-19 02:53:08] 2025-04-19 00:52:54,836 | INFO     | errors: (none)
[2025-04-19 02:53:08] 2025-04-19 00:52:54,836 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-19 02:53:08] 2025-04-19 00:52:54,836 | INFO     | pilot state: finished 
[2025-04-19 02:53:08] 2025-04-19 00:52:54,836 | INFO     | transexitcode: 0
[2025-04-19 02:53:08] 2025-04-19 00:52:54,836 | INFO     | exeerrorcode: 0
[2025-04-19 02:53:08] 2025-04-19 00:52:54,836 | INFO     | exeerrordiag: 
[2025-04-19 02:53:08] 2025-04-19 00:52:54,836 | INFO     | exitcode: 0
[2025-04-19 02:53:08] 2025-04-19 00:52:54,836 | INFO     | exitmsg: OK
[2025-04-19 02:53:08] 2025-04-19 00:52:54,836 | INFO     | cpuconsumptiontime: 24743 s
[2025-04-19 02:53:08] 2025-04-19 00:52:54,836 | INFO     | nevents: 400
[2025-04-19 02:53:08] 2025-04-19 00:52:54,836 | INFO     | neventsw: 0
[2025-04-19 02:53:08] 2025-04-19 00:52:54,836 | INFO     | pid: 798736
[2025-04-19 02:53:08] 2025-04-19 00:52:54,836 | INFO     | pgrp: 798736
[2025-04-19 02:53:08] 2025-04-19 00:52:54,836 | INFO     | corecount: 4
[2025-04-19 02:53:08] 2025-04-19 00:52:54,836 | INFO     | event service: False
[2025-04-19 02:53:08] 2025-04-19 00:52:54,836 | INFO     | sizes: {0: 2426774, 3: 2426980, 11: 2427008, 6687: 2454091, 6688: 2463034, 6689: 2463090, 6690: 2463388}
[2025-04-19 02:53:08] 2025-04-19 00:52:54,836 | INFO     | --------------------------------------------------
[2025-04-19 02:53:08] 2025-04-19 00:52:54,836 | INFO     | 
[2025-04-19 02:53:08] 2025-04-19 00:52:54,836 | INFO     | executing command: ls -lF /var/lib/boinc2/slots/0
[2025-04-19 02:53:08] 2025-04-19 00:52:54,846 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-19 02:53:08] 2025-04-19 00:52:54,846 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-19 02:53:08] 2025-04-19 00:52:54,846 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-19 02:53:08] 2025-04-19 00:52:54,846 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-19 02:53:08] 2025-04-19 00:52:54,846 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-19 02:53:08] 2025-04-19 00:52:54,846 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-19 02:53:08] 2025-04-19 00:52:54,846 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-19 02:53:08] 2025-04-19 00:52:54,846 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-19 02:53:08] 2025-04-19 00:52:54,846 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-19 02:53:08] 2025-04-19 00:52:54,846 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-19 02:53:08] 2025-04-19 00:52:54,846 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-19 02:53:08] 2025-04-19 00:52:54,846 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-19 02:53:08] 2025-04-19 00:52:54,846 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-19 02:53:08] 2025-04-19 00:52:54,846 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-19 02:53:08] 2025-04-19 00:52:54,846 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-19 02:53:08] 2025-04-19 00:52:54,846 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-19 02:53:08] 2025-04-19 00:52:54,846 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-19 02:53:08] 2025-04-19 00:52:54,846 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-19 02:53:08] 2025-04-19 00:52:54,846 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-19 02:53:08] 2025-04-19 00:52:54,846 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-19 02:53:08] 2025-04-19 00:52:54,846 | INFO     | job 6605946816 has completed (purged errors)
[2025-04-19 02:53:08] 2025-04-19 00:52:54,847 | INFO     | overall cleanup function is called
[2025-04-19 02:53:08] 2025-04-19 00:52:55,852 | INFO     | --- collectZombieJob: --- 10, [798736]
[2025-04-19 02:53:08] 2025-04-19 00:52:55,852 | INFO     | zombie collector waiting for pid 798736
[2025-04-19 02:53:08] 2025-04-19 00:52:55,853 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-19 02:53:08] 2025-04-19 00:52:55,853 | INFO     | collected zombie processes
[2025-04-19 02:53:08] 2025-04-19 00:52:55,853 | INFO     | will attempt to kill all subprocesses of pid=798736
[2025-04-19 02:53:08] 2025-04-19 00:52:55,896 | INFO     | process IDs to be killed: [798736] (in reverse order)
[2025-04-19 02:53:08] 2025-04-19 00:52:55,916 | WARNING  | found no corresponding commands to process id(s)
[2025-04-19 02:53:08] 2025-04-19 00:52:55,917 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-19 02:53:08] 2025-04-19 00:52:55,918 | INFO     | did not find any defunct processes belonging to 798736
[2025-04-19 02:53:08] 2025-04-19 00:52:55,919 | INFO     | did not find any defunct processes belonging to 798736
[2025-04-19 02:53:08] 2025-04-19 00:52:55,919 | INFO     | ready for new job
[2025-04-19 02:53:08] 2025-04-19 00:52:55,920 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-19 02:53:08] 2025-04-19 00:52:55,920 | INFO     | **************************************
[2025-04-19 02:53:08] 2025-04-19 00:52:55,920 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-19 02:53:08] 2025-04-19 00:52:55,920 | INFO     | **************************************
[2025-04-19 02:53:08] 2025-04-19 00:52:55,920 | INFO     | 
[2025-04-19 02:53:08] 2025-04-19 00:52:55,921 | INFO     | architecture information:
[2025-04-19 02:53:08] 2025-04-19 00:52:55,921 | INFO     | executing command: cat /etc/os-release
[2025-04-19 02:53:08] 2025-04-19 00:52:55,927 | INFO     | cat /etc/os-release:
[2025-04-19 02:53:08] NAME="CentOS Linux"
[2025-04-19 02:53:08] VERSION="7 (Core)"
[2025-04-19 02:53:08] ID="centos"
[2025-04-19 02:53:08] ID_LIKE="rhel fedora"
[2025-04-19 02:53:08] VERSION_ID="7"
[2025-04-19 02:53:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-19 02:53:08] ANSI_COLOR="0;31"
[2025-04-19 02:53:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-19 02:53:08] HOME_URL="https://www.centos.org/"
[2025-04-19 02:53:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-19 02:53:08] 
[2025-04-19 02:53:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-19 02:53:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-19 02:53:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-19 02:53:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-19 02:53:08] 
[2025-04-19 02:53:08] 2025-04-19 00:52:55,927 | INFO     | **************************************
[2025-04-19 02:53:08] 2025-04-19 00:52:56,427 | INFO     | executing command: df -mP /var/lib/boinc2/slots/0
[2025-04-19 02:53:08] 2025-04-19 00:52:56,434 | INFO     | sufficient remaining disk space (79011250176 B)
[2025-04-19 02:53:08] 2025-04-19 00:52:56,434 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-19 02:53:08] 2025-04-19 00:52:56,435 | INFO     | current server update state: UPDATING_FINAL
[2025-04-19 02:53:08] 2025-04-19 00:52:56,435 | INFO     | update_server=False
[2025-04-19 02:53:08] 2025-04-19 00:52:56,435 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-19 02:53:08] 2025-04-19 00:52:56,435 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-19 02:53:08] 2025-04-19 00:52:56,435 | INFO     | found 0 job(s) in 20 queues
[2025-04-19 02:53:08] 2025-04-19 00:52:56,435 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-19 02:53:08] 2025-04-19 00:52:56,435 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-19 02:53:08] 2025-04-19 00:52:56,435 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-19 02:53:08] 2025-04-19 00:52:56,435 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-19 02:53:08] 2025-04-19 00:52:56,435 | INFO     | aborting loop
[2025-04-19 02:53:08] 2025-04-19 00:52:56,435 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-19 02:53:08] 2025-04-19 00:52:56,609 | INFO     | all data control threads have been joined
[2025-04-19 02:53:08] 2025-04-19 00:52:56,897 | INFO     | all job control threads have been joined
[2025-04-19 02:53:08] 2025-04-19 00:52:57,436 | INFO     | [job] queue monitor thread has finished
[2025-04-19 02:53:08] 2025-04-19 00:52:57,440 | INFO     | [job] retrieve thread has finished
[2025-04-19 02:53:08] 2025-04-19 00:52:57,440 | INFO     | [job] job monitor thread has finished
[2025-04-19 02:53:08] 2025-04-19 00:52:57,473 | INFO     | [payload] validate_pre thread has finished
[2025-04-19 02:53:08] 2025-04-19 00:52:57,614 | INFO     | [data] control thread has finished
[2025-04-19 02:53:08] 2025-04-19 00:52:57,815 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-19 02:53:08] 2025-04-19 00:52:57,840 | INFO     | all payload control threads have been joined
[2025-04-19 02:53:08] 2025-04-19 00:52:57,900 | INFO     | [job] control thread has finished
[2025-04-19 02:53:08] 2025-04-19 00:52:58,275 | INFO     | [payload] failed_post thread has finished
[2025-04-19 02:53:08] 2025-04-19 00:52:58,280 | INFO     | [payload] execute_payloads thread has finished
[2025-04-19 02:53:08] 2025-04-19 00:52:58,391 | INFO     | [data] copytool_in thread has finished
[2025-04-19 02:53:08] 2025-04-19 00:52:58,440 | INFO     | [data] copytool_out thread has finished
[2025-04-19 02:53:08] 2025-04-19 00:52:58,587 | INFO     | [job] validate thread has finished
[2025-04-19 02:53:08] 2025-04-19 00:52:58,802 | INFO     | [payload] validate_post thread has finished
[2025-04-19 02:53:08] 2025-04-19 00:52:58,807 | INFO     | [job] create_data_payload thread has finished
[2025-04-19 02:53:08] 2025-04-19 00:52:58,843 | INFO     | [payload] control thread has finished
[2025-04-19 02:53:08] 2025-04-19 00:52:59,259 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-19 02:53:08] 2025-04-19 00:53:03,262 | INFO     | [data] queue_monitor thread has finished
[2025-04-19 02:53:08] 2025-04-19 00:53:03,849 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 125774918043456)>', '<ExcThread(monitor, started 125774292055808)>']
[2025-04-19 02:53:08] 2025-04-19 00:53:04,466 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-19 02:53:08] 2025-04-19 00:53:04,466 | INFO     | [monitor] control thread has ended
[2025-04-19 02:53:08] 2025-04-19 00:53:08,852 | INFO     | all workflow threads have been joined
[2025-04-19 02:53:08] 2025-04-19 00:53:08,852 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-19 02:53:08] 2025-04-19 00:53:08,852 | INFO     | traces error code: 0
[2025-04-19 02:53:08] 2025-04-19 00:53:08,852 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-19 02:53:08] 2025-04-19 00:53:08,894 [wrapper] ==== pilot stdout END ====
[2025-04-19 02:53:08] 2025-04-19 00:53:08,895 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-19 02:53:08] 2025-04-19 00:53:08,897 [wrapper] pilotpid: 792203
[2025-04-19 02:53:08] 2025-04-19 00:53:08,898 [wrapper] Pilot exit status: 0
[2025-04-19 02:53:08] 2025-04-19 00:53:08,902 [wrapper] pandaids: 6605946816
[2025-04-19 02:53:08] 2025-04-19 00:53:08,916 [wrapper] cleanup supervisor_pilot  863060 792204
[2025-04-19 02:53:08] 2025-04-19 00:53:08,917 [wrapper] Test setup, not cleaning
[2025-04-19 02:53:08] 2025-04-19 00:53:08,918 [wrapper] apfmon messages muted
[2025-04-19 02:53:08] 2025-04-19 00:53:08,920 [wrapper] ==== wrapper stdout END ====
[2025-04-19 02:53:08] 2025-04-19 00:53:08,921 [wrapper] ==== wrapper stderr END ====
[2025-04-19 02:53:08]  *** Error codes and diagnostics ***
[2025-04-19 02:53:08]     "exeErrorCode": 0,
[2025-04-19 02:53:08]     "exeErrorDiag": "",
[2025-04-19 02:53:08]     "pilotErrorCode": 0,
[2025-04-19 02:53:08]     "pilotErrorDiag": "",
[2025-04-19 02:53:08]  *** Listing of results directory ***
[2025-04-19 02:53:08] insgesamt 410836
[2025-04-19 02:53:08] -rw-r--r-- 1 boinc boinc    495897 18. Apr 02:30 pilot3.tar.gz
[2025-04-19 02:53:08] -rwx------ 1 boinc boinc     37140 18. Apr 02:34 runpilot2-wrapper.sh
[2025-04-19 02:53:08] -rw-r--r-- 1 boinc boinc      5111 18. Apr 02:34 queuedata.json
[2025-04-19 02:53:08] -rw-r--r-- 1 boinc boinc       100 19. Apr 01:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-19 02:53:08] -rwxr-xr-x 1 boinc boinc      7986 19. Apr 01:01 run_atlas
[2025-04-19 02:53:08] -rw-r--r-- 1 boinc boinc       105 19. Apr 01:01 job.xml
[2025-04-19 02:53:08] -rw-r--r-- 1 boinc boinc      6946 19. Apr 01:01 init_data.xml
[2025-04-19 02:53:08] -rw-r--r-- 2 boinc boinc 222785494 19. Apr 01:01 EVNT.44075481._002421.pool.root.1
[2025-04-19 02:53:08] drwxrwx--x 2 boinc boinc      4096 19. Apr 01:01 shared
[2025-04-19 02:53:08] -rw-r--r-- 2 boinc boinc    508887 19. Apr 01:01 input.tar.gz
[2025-04-19 02:53:08] -rw-r--r-- 2 boinc boinc     17569 19. Apr 01:01 start_atlas.sh
[2025-04-19 02:53:08] -rw-r--r-- 1 boinc boinc         0 19. Apr 01:01 boinc_lockfile
[2025-04-19 02:53:08] -rw-r--r-- 1 boinc boinc      2578 19. Apr 01:01 pandaJob.out
[2025-04-19 02:53:08] -rw------- 1 boinc boinc       461 19. Apr 01:01 setup.sh.local
[2025-04-19 02:53:08] -rw------- 1 boinc boinc    991300 19. Apr 01:01 agis_schedconf.cvmfs.json
[2025-04-19 02:53:08] -rw------- 1 boinc boinc   1618536 19. Apr 01:01 agis_ddmendpoints.agis.ALL.json
[2025-04-19 02:53:08] drwx------ 4 boinc boinc      4096 19. Apr 01:01 pilot3
[2025-04-19 02:53:08] -rw------- 1 boinc boinc        95 19. Apr 02:52 pilot_heartbeat.json
[2025-04-19 02:53:08] -rw------- 1 boinc boinc 192244706 19. Apr 02:52 HITS.44075483._062264.pool.root.1
[2025-04-19 02:53:08] -rw-r--r-- 1 boinc boinc       529 19. Apr 02:52 boinc_task_state.xml
[2025-04-19 02:53:08] -rw------- 1 boinc boinc      1015 19. Apr 02:52 memory_monitor_summary.json
[2025-04-19 02:53:08] -rw------- 1 boinc boinc    251519 19. Apr 02:52 log.44075483._062264.job.log.tgz.1
[2025-04-19 02:53:08] -rw-r--r-- 1 boinc boinc      8192 19. Apr 02:52 boinc_mmap_file
[2025-04-19 02:53:08] -rw-r--r-- 1 boinc boinc        27 19. Apr 02:52 wrapper_checkpoint.txt
[2025-04-19 02:53:08] -rw------- 1 boinc boinc      7630 19. Apr 02:52 heartbeat.json
[2025-04-19 02:53:08] -rw------- 1 boinc boinc      4477 19. Apr 02:53 pilotlog.txt
[2025-04-19 02:53:08] -rw------- 1 boinc boinc    646980 19. Apr 02:53 log.44075483._062264.job.log.1
[2025-04-19 02:53:08] -rw------- 1 boinc boinc       357 19. Apr 02:53 output.list
[2025-04-19 02:53:08] -rw-r--r-- 1 boinc boinc       620 19. Apr 02:53 runtime_log
[2025-04-19 02:53:08] -rw------- 1 boinc boinc    921600 19. Apr 02:53 result.tar.gz
[2025-04-19 02:53:08] -rw-r--r-- 1 boinc boinc     11355 19. Apr 02:53 runtime_log.err
[2025-04-19 02:53:08] -rw------- 1 boinc boinc       641 19. Apr 02:53 grMLDmSroP7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDm91dLDmXoh7Vn.diag
[2025-04-19 02:53:08] -rw-r--r-- 1 boinc boinc     20791 19. Apr 02:53 stderr.txt
[2025-04-19 02:53:08] HITS file was successfully produced:
[2025-04-19 02:53:08] -rw------- 1 boinc boinc 192244706 19. Apr 02:52 shared/HITS.pool.root.1
[2025-04-19 02:53:08]  *** Contents of shared directory: ***
[2025-04-19 02:53:08] insgesamt 406732
[2025-04-19 02:53:08] -rw-r--r-- 2 boinc boinc 222785494 19. Apr 01:01 ATLAS.root_0
[2025-04-19 02:53:08] -rw-r--r-- 2 boinc boinc    508887 19. Apr 01:01 input.tar.gz
[2025-04-19 02:53:08] -rw-r--r-- 2 boinc boinc     17569 19. Apr 01:01 start_atlas.sh
[2025-04-19 02:53:08] -rw------- 1 boinc boinc 192244706 19. Apr 02:52 HITS.pool.root.1
[2025-04-19 02:53:08] -rw------- 1 boinc boinc    921600 19. Apr 02:53 result.tar.gz
02:53:10 (788506): run_atlas exited; CPU time 24803.917611
02:53:10 (788506): called boinc_finish(0)

</stderr_txt>
]]>

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