Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:03:31 (205685): wrapper (7.7.26015): starting
07:03:31 (205685): wrapper: running run_atlas (--nthreads 12)
[2025-04-18 07:03:31] Arguments: --nthreads 12
[2025-04-18 07:03:31] Threads: 12
[2025-04-18 07:03:31] Checking for CVMFS
[2025-04-18 07:03:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-18 07:03:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-18 07:03:32] Running cvmfs_config stat atlas.cern.ch
[2025-04-18 07:03:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-18 07:03:32] 2.11.5.0 2965 21422 221688 145003 0 156 41178668 45568001 10987 130560 0 158718369 99.697 163042996 26037 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-04-18 07:03:32] CVMFS is ok
[2025-04-18 07:03:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-18 07:03:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-18 07:03:32] Further information can be found at the LHC@home message board.
[2025-04-18 07:03:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-18 07:03:32] Checking for apptainer binary...
[2025-04-18 07:03:32] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-18 07:03:32] Running /usr/bin/apptainer --version
[2025-04-18 07:03:32] apptainer version 1.3.5-1.el9
[2025-04-18 07:03:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-18 07:03:32] WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0088.triumf.lcg
[2025-04-18 07:03:32] apptainer works
[2025-04-18 07:03:32] Set ATHENA_PROC_NUMBER=12
[2025-04-18 07:03:32] Set ATHENA_CORE_NUMBER=12
[2025-04-18 07:03:32] Starting ATLAS job with PandaID=6605895851
[2025-04-18 07:03:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-18 09:23:55]  *** The last 200 lines of the pilot log: ***
[2025-04-18 09:23:55] 2025-04-18 16:23:36,515 | INFO     | sum of square deviations: 729496445.5187969
[2025-04-18 09:23:55] 2025-04-18 16:23:36,515 | INFO     | sum of deviations: 70647282452.14288
[2025-04-18 09:23:55] 2025-04-18 16:23:36,515 | INFO     | mean x: 1744989067.0601504
[2025-04-18 09:23:55] 2025-04-18 16:23:36,515 | INFO     | mean y: 2592170.8571428573
[2025-04-18 09:23:55] 2025-04-18 16:23:36,515 | INFO     | -- intersect: -168988958444.34488
[2025-04-18 09:23:55] 2025-04-18 16:23:36,515 | INFO     | intersect: -168988958444.34488
[2025-04-18 09:23:55] 2025-04-18 16:23:36,515 | INFO     | chi2: 3.6896979341300655
[2025-04-18 09:23:55] 2025-04-18 16:23:36,516 | INFO     | current chi2=3.6896979341300655 (change=16.32562715501367 %)
[2025-04-18 09:23:55] 2025-04-18 16:23:36,516 | INFO     | right removable region: 132
[2025-04-18 09:23:55] 2025-04-18 16:23:36,516 | INFO     | sum of square deviations: 729491565.5187969
[2025-04-18 09:23:55] 2025-04-18 16:23:36,516 | INFO     | sum of deviations: 30671672331.902275
[2025-04-18 09:23:55] 2025-04-18 16:23:36,516 | INFO     | mean x: 1744989372.0601504
[2025-04-18 09:23:55] 2025-04-18 16:23:36,516 | INFO     | mean y: 2640290.887218045
[2025-04-18 09:23:55] 2025-04-18 16:23:36,516 | INFO     | -- intersect: -73365914977.35286
[2025-04-18 09:23:55] 2025-04-18 16:23:36,516 | INFO     | intersect: -73365914977.35286
[2025-04-18 09:23:55] 2025-04-18 16:23:36,516 | INFO     | chi2: 2.2832573395910947
[2025-04-18 09:23:55] 2025-04-18 16:23:36,516 | INFO     | current chi2=2.2832573395910947 (change=48.22065942939 %)
[2025-04-18 09:23:55] 2025-04-18 16:23:36,517 | INFO     | sum of square deviations: 650269035.5
[2025-04-18 09:23:55] 2025-04-18 16:23:36,517 | INFO     | sum of deviations: 6362419327.5625
[2025-04-18 09:23:55] 2025-04-18 16:23:36,517 | INFO     | mean x: 1744989524.5625
[2025-04-18 09:23:55] 2025-04-18 16:23:36,517 | INFO     | mean y: 2687099.4921875
[2025-04-18 09:23:55] 2025-04-18 16:23:36,517 | INFO     | -- intersect: -17070792447.221596
[2025-04-18 09:23:55] 2025-04-18 16:23:36,517 | INFO     | intersect: -17070792447.221596
[2025-04-18 09:23:55] 2025-04-18 16:23:36,517 | INFO     | chi2: 1.2638935093728767
[2025-04-18 09:23:55] 2025-04-18 16:23:36,517 | INFO     | current chi2=1.2638935093728767 (change=44.64515727345803 %)
[2025-04-18 09:23:55] 2025-04-18 16:23:36,517 | INFO     | sum of square deviations: 577000105.4796736
[2025-04-18 09:23:55] 2025-04-18 16:23:36,518 | INFO     | sum of deviations: -7906854039.796748
[2025-04-18 09:23:55] 2025-04-18 16:23:36,518 | INFO     | mean x: 1744989677.0650406
[2025-04-18 09:23:55] 2025-04-18 16:23:36,518 | INFO     | mean y: 2716377.349593496
[2025-04-18 09:23:55] 2025-04-18 16:23:36,518 | INFO     | -- intersect: 23914980077.951965
[2025-04-18 09:23:55] 2025-04-18 16:23:36,518 | INFO     | intersect: 23914980077.951965
[2025-04-18 09:23:55] 2025-04-18 16:23:36,518 | INFO     | chi2: 0.7245948481065678
[2025-04-18 09:23:55] 2025-04-18 16:23:36,518 | INFO     | current chi2=0.7245948481065678 (change=42.669628197861385 %)
[2025-04-18 09:23:55] 2025-04-18 16:23:36,518 | INFO     | sum of square deviations: 509452212.95762706
[2025-04-18 09:23:55] 2025-04-18 16:23:36,519 | INFO     | sum of deviations: -8021881049.330509
[2025-04-18 09:23:55] 2025-04-18 16:23:36,519 | INFO     | mean x: 1744989829.5677967
[2025-04-18 09:23:55] 2025-04-18 16:23:36,519 | INFO     | mean y: 2716653.2288135593
[2025-04-18 09:23:55] 2025-04-18 16:23:36,519 | INFO     | -- intersect: 27479485796.73365
[2025-04-18 09:23:55] 2025-04-18 16:23:36,519 | INFO     | intersect: 27479485796.73365
[2025-04-18 09:23:55] 2025-04-18 16:23:36,519 | INFO     | chi2: 0.7235502194809467
[2025-04-18 09:23:55] 2025-04-18 16:23:36,519 | INFO     | current chi2=0.7235502194809467 (change=0.14416727200736623 %)
[2025-04-18 09:23:55] 2025-04-18 16:23:36,519 | INFO     | left removable region: 40
[2025-04-18 09:23:55] 2025-04-18 16:23:36,519 | INFO     | sum of square deviations: 241441910.4673913
[2025-04-18 09:23:55] 2025-04-18 16:23:36,519 | INFO     | sum of deviations: -695290078.6521738
[2025-04-18 09:23:55] 2025-04-18 16:23:36,519 | INFO     | mean x: 1744990256.576087
[2025-04-18 09:23:55] 2025-04-18 16:23:36,519 | INFO     | mean y: 2738022.5217391304
[2025-04-18 09:23:55] 2025-04-18 16:23:36,519 | INFO     | -- intersect: 5027857358.238422
[2025-04-18 09:23:55] 2025-04-18 16:23:36,519 | INFO     | intersect: 5027857358.238422
[2025-04-18 09:23:55] 2025-04-18 16:23:36,520 | INFO     | chi2: 0.0006024808856326223
[2025-04-18 09:23:55] 2025-04-18 16:23:36,520 | INFO     | -- intersect: 5027857358.238422
[2025-04-18 09:23:55] 2025-04-18 16:23:36,520 | INFO     | current memory leak: -2.88 B/s (using 92 data points, chi2=0.00)
[2025-04-18 09:23:55] 2025-04-18 16:23:36,520 | INFO     | ..............................
[2025-04-18 09:23:55] 2025-04-18 16:23:36,520 | INFO     | . Timing measurements:
[2025-04-18 09:23:55] 2025-04-18 16:23:36,520 | INFO     | . get job = 0 s
[2025-04-18 09:23:55] 2025-04-18 16:23:36,520 | INFO     | . initial setup = 2 s
[2025-04-18 09:23:55] 2025-04-18 16:23:36,520 | INFO     | . payload setup = 3 s
[2025-04-18 09:23:55] 2025-04-18 16:23:36,520 | INFO     | . stage-in = 0 s
[2025-04-18 09:23:55] 2025-04-18 16:23:36,520 | INFO     | . payload execution = 8372 s
[2025-04-18 09:23:55] 2025-04-18 16:23:36,520 | INFO     | . stage-out = 0 s
[2025-04-18 09:23:55] 2025-04-18 16:23:36,520 | INFO     | . log creation = 0 s
[2025-04-18 09:23:55] 2025-04-18 16:23:36,520 | INFO     | ..............................
[2025-04-18 09:23:55] 2025-04-18 16:23:36,575 | INFO     | 
[2025-04-18 09:23:55] 2025-04-18 16:23:36,575 | INFO     | job summary report
[2025-04-18 09:23:55] 2025-04-18 16:23:36,575 | INFO     | --------------------------------------------------
[2025-04-18 09:23:55] 2025-04-18 16:23:36,575 | INFO     | PanDA job id: 6605895851
[2025-04-18 09:23:55] 2025-04-18 16:23:36,575 | INFO     | task id: 44075483
[2025-04-18 09:23:55] 2025-04-18 16:23:36,575 | INFO     | errors: (none)
[2025-04-18 09:23:55] 2025-04-18 16:23:36,575 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-18 09:23:55] 2025-04-18 16:23:36,575 | INFO     | pilot state: finished 
[2025-04-18 09:23:55] 2025-04-18 16:23:36,575 | INFO     | transexitcode: 0
[2025-04-18 09:23:55] 2025-04-18 16:23:36,575 | INFO     | exeerrorcode: 0
[2025-04-18 09:23:55] 2025-04-18 16:23:36,576 | INFO     | exeerrordiag: 
[2025-04-18 09:23:55] 2025-04-18 16:23:36,576 | INFO     | exitcode: 0
[2025-04-18 09:23:55] 2025-04-18 16:23:36,576 | INFO     | exitmsg: OK
[2025-04-18 09:23:55] 2025-04-18 16:23:36,576 | INFO     | cpuconsumptiontime: 26072 s
[2025-04-18 09:23:55] 2025-04-18 16:23:36,576 | INFO     | nevents: 400
[2025-04-18 09:23:55] 2025-04-18 16:23:36,576 | INFO     | neventsw: 0
[2025-04-18 09:23:55] 2025-04-18 16:23:36,576 | INFO     | pid: 215595
[2025-04-18 09:23:55] 2025-04-18 16:23:36,576 | INFO     | pgrp: 215595
[2025-04-18 09:23:55] 2025-04-18 16:23:36,576 | INFO     | corecount: 12
[2025-04-18 09:23:55] 2025-04-18 16:23:36,576 | INFO     | event service: False
[2025-04-18 09:23:55] 2025-04-18 16:23:36,576 | INFO     | sizes: {0: 2426599, 1: 2426798, 3: 2427004, 11: 2427032, 8379: 2454801, 8380: 2463920, 8383: 2464034}
[2025-04-18 09:23:55] 2025-04-18 16:23:36,576 | INFO     | --------------------------------------------------
[2025-04-18 09:23:55] 2025-04-18 16:23:36,576 | INFO     | 
[2025-04-18 09:23:55] 2025-04-18 16:23:36,576 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-04-18 09:23:55] 2025-04-18 16:23:36,588 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-18 09:23:55] 2025-04-18 16:23:36,589 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-18 09:23:55] 2025-04-18 16:23:36,589 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-18 09:23:55] 2025-04-18 16:23:36,589 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-18 09:23:55] 2025-04-18 16:23:36,589 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-18 09:23:55] 2025-04-18 16:23:36,589 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-18 09:23:55] 2025-04-18 16:23:36,589 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-18 09:23:55] 2025-04-18 16:23:36,589 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-18 09:23:55] 2025-04-18 16:23:36,589 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-18 09:23:55] 2025-04-18 16:23:36,589 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-18 09:23:55] 2025-04-18 16:23:36,589 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-18 09:23:55] 2025-04-18 16:23:36,589 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-18 09:23:55] 2025-04-18 16:23:36,589 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-18 09:23:55] 2025-04-18 16:23:36,589 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-18 09:23:55] 2025-04-18 16:23:36,589 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-18 09:23:55] 2025-04-18 16:23:36,589 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-18 09:23:55] 2025-04-18 16:23:36,589 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-18 09:23:55] 2025-04-18 16:23:36,589 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-18 09:23:55] 2025-04-18 16:23:36,589 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-18 09:23:55] 2025-04-18 16:23:36,589 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-18 09:23:55] 2025-04-18 16:23:36,590 | INFO     | job 6605895851 has completed (purged errors)
[2025-04-18 09:23:55] 2025-04-18 16:23:36,590 | INFO     | overall cleanup function is called
[2025-04-18 09:23:55] 2025-04-18 16:23:37,597 | INFO     | --- collectZombieJob: --- 10, [215595]
[2025-04-18 09:23:55] 2025-04-18 16:23:37,597 | INFO     | zombie collector waiting for pid 215595
[2025-04-18 09:23:55] 2025-04-18 16:23:37,598 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-18 09:23:55] 2025-04-18 16:23:37,598 | INFO     | collected zombie processes
[2025-04-18 09:23:55] 2025-04-18 16:23:37,598 | INFO     | will attempt to kill all subprocesses of pid=215595
[2025-04-18 09:23:55] 2025-04-18 16:23:37,729 | WARNING  | process 215595 can no longer be monitored (due to stat problems) - aborting
[2025-04-18 09:23:55] 2025-04-18 16:23:38,022 | INFO     | process IDs to be killed: [215595] (in reverse order)
[2025-04-18 09:23:55] 2025-04-18 16:23:38,055 | INFO     | using path: /home/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2025-04-18 09:23:55] 2025-04-18 16:23:38,077 | WARNING  | found no corresponding commands to process id(s)
[2025-04-18 09:23:55] 2025-04-18 16:23:38,077 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-18 09:23:55] 2025-04-18 16:23:38,098 | INFO     | did not find any defunct processes belonging to 215595
[2025-04-18 09:23:55] 2025-04-18 16:23:38,114 | INFO     | did not find any defunct processes belonging to 215595
[2025-04-18 09:23:55] 2025-04-18 16:23:38,114 | INFO     | ready for new job
[2025-04-18 09:23:55] 2025-04-18 16:23:38,115 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-18 09:23:55] 2025-04-18 16:23:38,116 | INFO     | **************************************
[2025-04-18 09:23:55] 2025-04-18 16:23:38,116 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-18 09:23:55] 2025-04-18 16:23:38,116 | INFO     | **************************************
[2025-04-18 09:23:55] 2025-04-18 16:23:38,116 | INFO     | 
[2025-04-18 09:23:55] 2025-04-18 16:23:38,119 | INFO     | architecture information:
[2025-04-18 09:23:55] 2025-04-18 16:23:38,119 | INFO     | executing command: cat /etc/os-release
[2025-04-18 09:23:55] 2025-04-18 16:23:38,129 | INFO     | cat /etc/os-release:
[2025-04-18 09:23:55] NAME="CentOS Linux"
[2025-04-18 09:23:55] VERSION="7 (Core)"
[2025-04-18 09:23:55] ID="centos"
[2025-04-18 09:23:55] ID_LIKE="rhel fedora"
[2025-04-18 09:23:55] VERSION_ID="7"
[2025-04-18 09:23:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-18 09:23:55] ANSI_COLOR="0;31"
[2025-04-18 09:23:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-18 09:23:55] HOME_URL="https://www.centos.org/"
[2025-04-18 09:23:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-18 09:23:55] 
[2025-04-18 09:23:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-18 09:23:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-18 09:23:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-18 09:23:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-18 09:23:55] 
[2025-04-18 09:23:55] 2025-04-18 16:23:38,130 | INFO     | **************************************
[2025-04-18 09:23:55] 2025-04-18 16:23:38,230 | INFO     | number of running child processes to parent process 215595: 1
[2025-04-18 09:23:55] 2025-04-18 16:23:38,230 | INFO     | maximum number of monitored processes: 6
[2025-04-18 09:23:55] 2025-04-18 16:23:38,230 | INFO     | aborting job monitoring since job object (job id=6605895851) has expired
[2025-04-18 09:23:55] 2025-04-18 16:23:38,632 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-04-18 09:23:55] 2025-04-18 16:23:38,644 | INFO     | sufficient remaining disk space (2193651400704 B)
[2025-04-18 09:23:55] 2025-04-18 16:23:38,645 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-18 09:23:55] 2025-04-18 16:23:38,645 | INFO     | current server update state: UPDATING_FINAL
[2025-04-18 09:23:55] 2025-04-18 16:23:38,645 | INFO     | update_server=False
[2025-04-18 09:23:55] 2025-04-18 16:23:38,645 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-18 09:23:55] 2025-04-18 16:23:38,645 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-18 09:23:55] 2025-04-18 16:23:38,645 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-18 09:23:55] 2025-04-18 16:23:38,646 | INFO     | found 0 job(s) in 20 queues
[2025-04-18 09:23:55] 2025-04-18 16:23:38,646 | INFO     | will abort loop
[2025-04-18 09:23:55] 2025-04-18 16:23:38,646 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-18 09:23:55] 2025-04-18 16:23:38,646 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-18 09:23:55] 2025-04-18 16:23:39,014 | INFO     | all job control threads have been joined
[2025-04-18 09:23:55] 2025-04-18 16:23:39,374 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-18 09:23:55] 2025-04-18 16:23:39,383 | INFO     | all data control threads have been joined
[2025-04-18 09:23:55] 2025-04-18 16:23:39,648 | INFO     | [job] job monitor thread has finished
[2025-04-18 09:23:55] 2025-04-18 16:23:39,650 | INFO     | [job] retrieve thread has finished
[2025-04-18 09:23:55] 2025-04-18 16:23:39,685 | INFO     | all payload control threads have been joined
[2025-04-18 09:23:55] 2025-04-18 16:23:39,763 | INFO     | [job] validate thread has finished
[2025-04-18 09:23:55] 2025-04-18 16:23:39,785 | INFO     | [payload] validate_pre thread has finished
[2025-04-18 09:23:55] 2025-04-18 16:23:39,825 | INFO     | [payload] failed_post thread has finished
[2025-04-18 09:23:55] 2025-04-18 16:23:39,922 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-18 09:23:55] 2025-04-18 16:23:40,018 | INFO     | [job] control thread has finished
[2025-04-18 09:23:55] 2025-04-18 16:23:40,267 | INFO     | [payload] execute_payloads thread has finished
[2025-04-18 09:23:55] 2025-04-18 16:23:40,385 | INFO     | [data] control thread has finished
[2025-04-18 09:23:55] 2025-04-18 16:23:40,686 | INFO     | [payload] control thread has finished
[2025-04-18 09:23:55] 2025-04-18 16:23:40,705 | INFO     | [payload] validate_post thread has finished
[2025-04-18 09:23:55] 2025-04-18 16:23:40,802 | INFO     | [data] copytool_in thread has finished
[2025-04-18 09:23:55] 2025-04-18 16:23:41,116 | INFO     | [job] create_data_payload thread has finished
[2025-04-18 09:23:55] 2025-04-18 16:23:41,379 | INFO     | [data] copytool_out thread has finished
[2025-04-18 09:23:55] 2025-04-18 16:23:41,584 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-18 09:23:55] 2025-04-18 16:23:42,593 | INFO     | [job] queue monitor thread has finished
[2025-04-18 09:23:55] 2025-04-18 16:23:43,927 | INFO     | [data] queue_monitor thread has finished
[2025-04-18 09:23:55] 2025-04-18 16:23:48,941 | INFO     | job.realtimelogging is not enabled
[2025-04-18 09:23:55] 2025-04-18 16:23:49,946 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-18 09:23:55] 2025-04-18 16:23:50,024 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139697806600000)>', '<ExcThread(monitor, started 139697275782912)>']
[2025-04-18 09:23:55] 2025-04-18 16:23:50,704 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-18 09:23:55] 2025-04-18 16:23:50,704 | INFO     | [monitor] control thread has ended
[2025-04-18 09:23:55] 2025-04-18 16:23:55,050 | INFO     | all workflow threads have been joined
[2025-04-18 09:23:55] 2025-04-18 16:23:55,050 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-18 09:23:55] 2025-04-18 16:23:55,050 | INFO     | traces error code: 0
[2025-04-18 09:23:55] 2025-04-18 16:23:55,050 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-18 09:23:55] 2025-04-18 16:23:55,149 [wrapper] ==== pilot stdout END ====
[2025-04-18 09:23:55] 2025-04-18 16:23:55,151 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-18 09:23:55] 2025-04-18 16:23:55,153 [wrapper] pilotpid: 209258
[2025-04-18 09:23:55] 2025-04-18 16:23:55,155 [wrapper] Pilot exit status: 0
[2025-04-18 09:23:55] 2025-04-18 16:23:55,162 [wrapper] pandaids: 6605895851
[2025-04-18 09:23:55] 2025-04-18 16:23:55,199 [wrapper] cleanup supervisor_pilot  514853 209259
[2025-04-18 09:23:55] 2025-04-18 16:23:55,201 [wrapper] Test setup, not cleaning
[2025-04-18 09:23:55] 2025-04-18 16:23:55,203 [wrapper] apfmon messages muted
[2025-04-18 09:23:55] 2025-04-18 16:23:55,205 [wrapper] ==== wrapper stdout END ====
[2025-04-18 09:23:55] 2025-04-18 16:23:55,207 [wrapper] ==== wrapper stderr END ====
[2025-04-18 09:23:55]  *** Error codes and diagnostics ***
[2025-04-18 09:23:55]     "exeErrorCode": 0,
[2025-04-18 09:23:55]     "exeErrorDiag": "",
[2025-04-18 09:23:55]     "pilotErrorCode": 0,
[2025-04-18 09:23:55]     "pilotErrorDiag": "",
[2025-04-18 09:23:55]  *** Listing of results directory ***
[2025-04-18 09:23:55] total 415216
[2025-04-18 09:23:55] -rw-r--r--. 1 boinc boinc    495897 Apr 17 13:13 pilot3.tar.gz
[2025-04-18 09:23:55] -rwx------. 1 boinc boinc     37140 Apr 17 13:19 runpilot2-wrapper.sh
[2025-04-18 09:23:55] -rw-r--r--. 1 boinc boinc      5111 Apr 17 13:19 queuedata.json
[2025-04-18 09:23:55] -rw-r--r--. 1 boinc boinc       100 Apr 18 07:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-18 09:23:55] -rwxr-xr-x. 1 boinc boinc      7986 Apr 18 07:03 run_atlas
[2025-04-18 09:23:55] -rw-r--r--. 1 boinc boinc       105 Apr 18 07:03 job.xml
[2025-04-18 09:23:55] -rw-r--r--. 1 boinc boinc      6602 Apr 18 07:03 init_data.xml
[2025-04-18 09:23:55] -rw-r--r--. 2 boinc boinc 224430687 Apr 18 07:03 EVNT.44075481._002341.pool.root.1
[2025-04-18 09:23:55] -rw-r--r--. 2 boinc boinc     17569 Apr 18 07:03 start_atlas.sh
[2025-04-18 09:23:55] drwxrwx--x. 2 boinc boinc      4096 Apr 18 07:03 shared
[2025-04-18 09:23:55] -rw-r--r--. 2 boinc boinc    508884 Apr 18 07:03 input.tar.gz
[2025-04-18 09:23:55] -rw-r--r--. 1 boinc boinc         0 Apr 18 07:03 boinc_lockfile
[2025-04-18 09:23:55] -rw-r--r--. 1 boinc boinc      2578 Apr 18 07:03 pandaJob.out
[2025-04-18 09:23:55] -rw-------. 1 boinc boinc       424 Apr 18 07:03 setup.sh.local
[2025-04-18 09:23:55] -rw-------. 1 boinc boinc    990604 Apr 18 07:03 agis_schedconf.cvmfs.json
[2025-04-18 09:23:55] -rw-------. 1 boinc boinc   1618536 Apr 18 07:03 agis_ddmendpoints.agis.ALL.json
[2025-04-18 09:23:55] drwx------. 4 boinc boinc      4096 Apr 18 07:03 pilot3
[2025-04-18 09:23:55] -rw-------. 1 boinc boinc 194524818 Apr 18 09:23 HITS.44075483._060237.pool.root.1
[2025-04-18 09:23:55] -rw-r--r--. 1 boinc boinc       529 Apr 18 09:23 boinc_task_state.xml
[2025-04-18 09:23:55] -rw-------. 1 boinc boinc        95 Apr 18 09:23 pilot_heartbeat.json
[2025-04-18 09:23:55] -rw-------. 1 boinc boinc      1039 Apr 18 09:23 memory_monitor_summary.json
[2025-04-18 09:23:55] -rw-------. 1 boinc boinc    409941 Apr 18 09:23 log.44075483._060237.job.log.tgz.1
[2025-04-18 09:23:55] -rw-------. 1 boinc boinc      7721 Apr 18 09:23 heartbeat.json
[2025-04-18 09:23:55] -rw-r--r--. 1 boinc boinc      8192 Apr 18 09:23 boinc_mmap_file
[2025-04-18 09:23:55] -rw-r--r--. 1 boinc boinc        27 Apr 18 09:23 wrapper_checkpoint.txt
[2025-04-18 09:23:55] -rw-------. 1 boinc boinc      4836 Apr 18 09:23 pilotlog.txt
[2025-04-18 09:23:55] -rw-------. 1 boinc boinc    767655 Apr 18 09:23 log.44075483._060237.job.log.1
[2025-04-18 09:23:55] -rw-------. 1 boinc boinc       357 Apr 18 09:23 output.list
[2025-04-18 09:23:55] -rw-r--r--. 1 boinc boinc       620 Apr 18 09:23 runtime_log
[2025-04-18 09:23:55] -rw-------. 1 boinc boinc   1198080 Apr 18 09:23 result.tar.gz
[2025-04-18 09:23:55] -rw-r--r--. 1 boinc boinc     11144 Apr 18 09:23 runtime_log.err
[2025-04-18 09:23:55] -rw-------. 1 boinc boinc       659 Apr 18 09:23 JQYMDmdskP7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmbO4KDm5d8dzm.diag
[2025-04-18 09:23:55] -rw-r--r--. 1 boinc boinc     21150 Apr 18 09:23 stderr.txt
[2025-04-18 09:23:55] HITS file was successfully produced:
[2025-04-18 09:23:55] -rw-------. 1 boinc boinc 194524818 Apr 18 09:23 shared/HITS.pool.root.1
[2025-04-18 09:23:55]  *** Contents of shared directory: ***
[2025-04-18 09:23:55] total 410840
[2025-04-18 09:23:55] -rw-r--r--. 2 boinc boinc 224430687 Apr 18 07:03 ATLAS.root_0
[2025-04-18 09:23:55] -rw-r--r--. 2 boinc boinc     17569 Apr 18 07:03 start_atlas.sh
[2025-04-18 09:23:55] -rw-r--r--. 2 boinc boinc    508884 Apr 18 07:03 input.tar.gz
[2025-04-18 09:23:55] -rw-------. 1 boinc boinc 194524818 Apr 18 09:23 HITS.pool.root.1
[2025-04-18 09:23:55] -rw-------. 1 boinc boinc   1198080 Apr 18 09:23 result.tar.gz
09:23:56 (205685): run_atlas exited; CPU time 26172.429468
09:23:56 (205685): called boinc_finish(0)

</stderr_txt>
]]>

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