Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-04-19 21:24:59 (65545): Detected: vboxwrapper 26206
2025-04-19 21:24:59 (65545): Detected: BOINC client v8.0.2
2025-04-19 21:25:00 (65545): Detected: VirtualBox VboxManage Interface (Version: 7.1.6)
2025-04-19 21:25:00 (65545): Detected: Sandbox Configuration Enabled
2025-04-19 21:25:00 (65545): Successfully copied 'init_data.xml' to the shared directory.
2025-04-19 21:25:01 (65545): Create VM. (boinc_fc7cd5acf0b04a45, slot#0)
2025-04-19 21:25:02 (65545): Setting Memory Size for VM. (4400MB)
2025-04-19 21:25:03 (65545): Setting CPU Count for VM. (4)
2025-04-19 21:25:03 (65545): Setting Chipset Options for VM.
2025-04-19 21:25:04 (65545): Setting Graphics Controller Options for VM.
2025-04-19 21:25:05 (65545): Setting Boot Options for VM.
2025-04-19 21:25:05 (65545): Setting Network Configuration for NAT.
2025-04-19 21:25:06 (65545): Enabling VM Network Access.
2025-04-19 21:25:07 (65545): Disabling USB Support for VM.
2025-04-19 21:25:07 (65545): Disabling COM Port Support for VM.
2025-04-19 21:25:08 (65545): Disabling Audio Support for VM.
2025-04-19 21:25:08 (65545): Disabling Clipboard Support for VM.
2025-04-19 21:25:09 (65545): Disabling Drag and Drop Support for VM.
2025-04-19 21:25:09 (65545): Adding storage controller(s) to VM.
2025-04-19 21:25:10 (65545): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-04-19 21:25:15 (65545): Adding VirtualBox Guest Additions to VM.
2025-04-19 21:25:15 (65545): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-04-19 21:25:16 (65545): forwarding host port 53145 to guest port 80
2025-04-19 21:25:16 (65545): Enabling remote desktop for VM.
2025-04-19 21:25:17 (65545): Required extension pack not installed, remote desktop not enabled.
2025-04-19 21:25:17 (65545): Enabling shared directory for VM.
2025-04-19 21:25:18 (65545): Starting VM using VBoxManage interface. (boinc_fc7cd5acf0b04a45, slot#0)
2025-04-19 21:25:24 (65545): Successfully started VM. (PID = '65627')
2025-04-19 21:25:24 (65545): Reporting VM Process ID to BOINC.
2025-04-19 21:25:24 (65545): Guest Log: BIOS: VirtualBox 7.1.6
2025-04-19 21:25:24 (65545): Guest Log: CPUID EDX: 0x178bfbff
2025-04-19 21:25:24 (65545): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-04-19 21:25:24 (65545): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-04-19 21:25:24 (65545): VM state change detected. (old = 'poweredoff', new = 'running')
2025-04-19 21:25:24 (65545): Detected: Web Application Enabled (http://localhost:53145)
2025-04-19 21:25:24 (65545): Preference change detected
2025-04-19 21:25:24 (65545): Setting CPU throttle for VM. (100%)
2025-04-19 21:25:24 (65545): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-19 21:25:26 (65545): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-04-19 21:25:26 (65545): Guest Log: BIOS: Booting from Hard Disk...
2025-04-19 21:25:29 (65545): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-04-19 21:25:29 (65545): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-04-19 21:25:29 (65545): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-04-19 21:25:29 (65545): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-04-19 21:25:29 (65545): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-04-19 21:25:29 (65545): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-04-19 21:25:29 (65545): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-04-19 21:25:29 (65545): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-04-19 21:25:29 (65545): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-04-19 21:25:29 (65545): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-04-19 21:25:29 (65545): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-04-19 21:25:29 (65545): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-04-19 21:25:29 (65545): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-04-19 21:25:29 (65545): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-04-19 21:25:29 (65545): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-04-19 21:25:29 (65545): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-04-19 21:25:29 (65545): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-04-19 21:25:29 (65545): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-04-19 21:25:29 (65545): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-04-19 21:25:29 (65545): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-04-19 21:25:29 (65545): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-04-19 21:25:29 (65545): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-04-19 21:25:29 (65545): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-04-19 21:25:29 (65545): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-04-19 21:25:29 (65545): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-04-19 21:25:29 (65545): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-04-19 21:25:29 (65545): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-04-19 21:25:29 (65545): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-04-19 21:25:29 (65545): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-04-19 21:25:29 (65545): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-04-19 21:25:29 (65545): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-04-19 21:25:29 (65545): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-04-19 21:25:39 (65545): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-04-19 21:25:39 (65545): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-04-19 21:25:54 (65545): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-04-19 21:25:54 (65545): Guest Log: 00:00:00.000264 main     Log opened 2025-04-19T11:25:52.694502000Z
2025-04-19 21:25:54 (65545): Guest Log: 00:00:00.000494 main     OS Product: Linux
2025-04-19 21:25:54 (65545): Guest Log: 00:00:00.000582 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-04-19 21:25:54 (65545): Guest Log: 00:00:00.000667 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-04-19 21:25:54 (65545): Guest Log: 00:00:00.000747 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-04-19 21:25:54 (65545): Guest Log: 00:00:00.000749 main     Process ID: 1308
2025-04-19 21:25:54 (65545): Guest Log: 00:00:00.000750 main     Package type: LINUX_64BITS_GENERIC
2025-04-19 21:25:54 (65545): Guest Log: 00:00:00.006244 main     5.2.32 r132073 started. Verbose level = 0
2025-04-19 21:25:54 (65545): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-04-19 21:25:54 (65545): Guest Log: [INFO] Mounting shared directory
2025-04-19 21:25:55 (65545): Guest Log: [INFO] Checking for init_data.xml
2025-04-19 21:26:11 (65545): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-04-19 21:26:11 (65545): Guest Log: [INFO] Detected branch: prod
2025-04-19 21:26:12 (65545): Guest Log: This is the prod version of the ATLAS job wrapper
2025-04-19 21:26:12 (65545): Guest Log: Copying input files
2025-04-19 21:26:18 (65545): Guest Log: Copied input files into RunAtlas.
2025-04-19 21:26:18 (65545): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-04-19 21:26:18 (65545): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-04-19 21:26:18 (65545): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-04-19 21:26:18 (65545): Guest Log: Further information can be found at the LHC@home message board.
2025-04-19 21:26:32 (65545): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-04-19 21:26:33 (65545): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-04-19 21:26:33 (65545): Guest Log: 2.6.3.0 1604 0 30160 145037 4 1 3117322 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-04-19 21:26:34 (65545): Guest Log: copied the webapp to /var/www
2025-04-19 21:26:34 (65545): Guest Log: ATHENA_PROC_NUMBER=4
2025-04-19 21:26:34 (65545): Guest Log: ATHENA_CORE_NUMBER=4
2025-04-19 21:26:35 (65545): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-04-19 21:26:35 (65545): Guest Log:  *** Starting ATLAS job. (PandaID=6605829810 taskID=44075483) ***
2025-04-19 22:48:57 (65545): VM state change detected. (old = 'running', new = 'paused')
2025-04-19 22:51:57 (65545): VM state change detected. (old = 'paused', new = 'running')
2025-04-19 23:08:34 (65545): Status Report: Elapsed Time: '6000.451160'
2025-04-19 23:08:34 (65545): Status Report: CPU Time: '15654.860000'
2025-04-20 00:48:51 (65545): Status Report: Elapsed Time: '12000.868719'
2025-04-20 00:48:51 (65545): Status Report: CPU Time: '37290.000000'
2025-04-20 02:29:11 (65545): Status Report: Elapsed Time: '18001.756999'
2025-04-20 02:29:11 (65545): Status Report: CPU Time: '60009.960000'
2025-04-20 04:09:32 (65545): Status Report: Elapsed Time: '24002.580103'
2025-04-20 04:09:32 (65545): Status Report: CPU Time: '82731.500000'
2025-04-20 05:32:51 (65545): Guest Log:  *** Job finished ***
2025-04-20 05:32:51 (65545): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-20 05:32:51 (65545): Guest Log: 2025-04-19 19:30:01,413 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
2025-04-20 05:32:51 (65545): Guest Log: 2025-04-19 19:30:01,866 | INFO     | [data] copytool_out thread has finished
2025-04-20 05:32:51 (65545): Guest Log: 2025-04-19 19:30:05,509 | INFO     | [data] queue_monitor thread has finished
2025-04-20 05:32:51 (65545): Guest Log: 2025-04-19 19:30:06,674 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139833930295104)>', '<ExcThread(monitor, started 139833095730944)>']
2025-04-20 05:32:51 (65545): Guest Log: 2025-04-19 19:30:07,506 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-20 05:32:51 (65545): Guest Log: 2025-04-19 19:30:07,506 | INFO     | [monitor] control thread has ended
2025-04-20 05:32:51 (65545): Guest Log: 2025-04-19 19:30:11,679 | INFO     | all workflow threads have been joined
2025-04-20 05:32:51 (65545): Guest Log: 2025-04-19 19:30:11,679 | INFO     | end of generic workflow (traces error code: 0)
2025-04-20 05:32:51 (65545): Guest Log: 2025-04-19 19:30:11,680 | INFO     | traces error code: 0
2025-04-20 05:32:51 (65545): Guest Log: 2025-04-19 19:30:11,680 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-20 05:32:51 (65545): Guest Log: 2025-04-19 19:30:11,855 [wrapper] ==== pilot stdout END ====
2025-04-20 05:32:51 (65545): Guest Log: 2025-04-19 19:30:11,878 [wrapper] ==== wrapper stdout RESUME ====
2025-04-20 05:32:51 (65545): Guest Log: 2025-04-19 19:30:11,898 [wrapper] pilotpid: 5949
2025-04-20 05:32:51 (65545): Guest Log: 2025-04-19 19:30:11,912 [wrapper] Pilot exit status: 0
2025-04-20 05:32:51 (65545): Guest Log: 2025-04-19 19:30:12,694 [wrapper] pandaids: 6605829810
2025-04-20 05:32:51 (65545): Guest Log: 2025-04-19 19:30:12,849 [wrapper] cleanup supervisor_pilot 26088 5950
2025-04-20 05:32:51 (65545): Guest Log: 2025-04-19 19:30:12,875 [wrapper] Test setup, not cleaning
2025-04-20 05:32:51 (65545): Guest Log: 2025-04-19 19:30:12,897 [wrapper] apfmon messages muted
2025-04-20 05:32:51 (65545): Guest Log: 2025-04-19 19:30:12,921 [wrapper] ==== wrapper stdout END ====
2025-04-20 05:32:51 (65545): Guest Log: 2025-04-19 19:30:12,945 [wrapper] ==== wrapper stderr END ====
2025-04-20 05:32:51 (65545): Guest Log:  *** Error codes and diagnostics ***
2025-04-20 05:32:51 (65545): Guest Log:     "exeErrorCode": 0,
2025-04-20 05:32:51 (65545): Guest Log:     "exeErrorDiag": "",
2025-04-20 05:32:51 (65545): Guest Log:     "pilotErrorCode": 0,
2025-04-20 05:32:51 (65545): Guest Log:     "pilotErrorDiag": "",
2025-04-20 05:32:51 (65545): Guest Log:  *** Listing of results directory ***
2025-04-20 05:32:51 (65545): Guest Log: total 196564
2025-04-20 05:32:51 (65545): Guest Log: -rw-r--r--. 1 atlas atlas    495897 Apr 17 19:05 pilot3.tar.gz
2025-04-20 05:32:51 (65545): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Apr 17 19:13 queuedata.json
2025-04-20 05:32:51 (65545): Guest Log: -rwx------. 1 atlas atlas     37140 Apr 17 19:15 runpilot2-wrapper.sh
2025-04-20 05:32:51 (65545): Guest Log: -rw-r-----. 1 atlas atlas     17569 Apr 19 11:26 start_atlas.sh
2025-04-20 05:32:51 (65545): Guest Log: -rw-r-----. 1 atlas atlas    508893 Apr 19 11:26 input.tar.gz
2025-04-20 05:32:51 (65545): Guest Log: -rw-r--r--. 1 atlas atlas      6161 Apr 19 11:26 init_data.xml
2025-04-20 05:32:51 (65545): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr 19 11:26 EVNT.44075481._002320.pool.root.1 -> /data/./ATLAS.root_0
2025-04-20 05:32:51 (65545): Guest Log: -rw-r--r--. 1 atlas atlas      2579 Apr 19 11:26 pandaJob.out
2025-04-20 05:32:51 (65545): Guest Log: -rw-------. 1 atlas atlas       424 Apr 19 11:26 setup.sh.local
2025-04-20 05:32:51 (65545): Guest Log: -rw-------. 1 atlas atlas    991292 Apr 19 11:29 agis_schedconf.cvmfs.json
2025-04-20 05:32:51 (65545): Guest Log: drwx------. 4 atlas atlas      4096 Apr 19 11:30 pilot3
2025-04-20 05:32:51 (65545): Guest Log: -rw-------. 1 atlas atlas 193200649 Apr 19 19:28 HITS.44075483._059671.pool.root.1
2025-04-20 05:32:51 (65545): Guest Log: -rw-------. 1 atlas atlas        95 Apr 19 19:29 pilot_heartbeat.json
2025-04-20 05:32:51 (65545): Guest Log: -rw-------. 1 atlas atlas      1030 Apr 19 19:29 memory_monitor_summary.json
2025-04-20 05:32:51 (65545): Guest Log: -rw-------. 1 atlas atlas   1618536 Apr 19 19:29 agis_ddmendpoints.agis.ALL.json
2025-04-20 05:32:51 (65545): Guest Log: -rw-------. 1 atlas atlas    397890 Apr 19 19:29 log.44075483._059671.job.log.tgz.1
2025-04-20 05:32:51 (65545): Guest Log: -rw-------. 1 atlas atlas      7691 Apr 19 19:29 heartbeat.json
2025-04-20 05:32:51 (65545): Guest Log: -rw-------. 1 atlas atlas      4536 Apr 19 19:30 pilotlog.txt
2025-04-20 05:32:51 (65545): Guest Log: -rw-------. 1 atlas atlas   1740325 Apr 19 19:30 log.44075483._059671.job.log.1
2025-04-20 05:32:51 (65545): Guest Log: -rw-------. 1 atlas atlas       357 Apr 19 19:30 output.list
2025-04-20 05:32:51 (65545): Guest Log: -rw-r--r--. 1 atlas atlas       620 Apr 19 19:30 runtime_log
2025-04-20 05:32:51 (65545): Guest Log: -rw-------. 1 atlas atlas   2160640 Apr 19 19:30 result.tar.gz
2025-04-20 05:32:51 (65545): Guest Log: -rw-r--r--. 1 atlas atlas     10962 Apr 19 19:30 runtime_log.err
2025-04-20 05:32:51 (65545): Guest Log: -rw-------. 1 atlas atlas       669 Apr 19 19:30 euGLDmKtjP7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDm5adLDmJ6PORn.diag
2025-04-20 05:32:51 (65545): Guest Log: Looking for outputfile HITS.44075483._059671.pool.root.1
2025-04-20 05:32:51 (65545): Guest Log: HITS file was successfully produced
2025-04-20 05:32:51 (65545): Guest Log: -rw-------. 1 atlas atlas 193200649 Apr 19 19:28 /home/atlas/RunAtlas/HITS.44075483._059671.pool.root.1
2025-04-20 05:32:52 (65545): Guest Log: Successfully finished the ATLAS job!
2025-04-20 05:32:52 (65545): Guest Log: Copying the results back to the shared directory!
2025-04-20 05:32:52 (65545): Guest Log:  *** Contents of shared directory: ***
2025-04-20 05:32:52 (65545): Guest Log: total 232080
2025-04-20 05:32:52 (65545): Guest Log: -rw-rw----. 1 root root 224847437 Apr 19 11:24 ATLAS.root_0
2025-04-20 05:32:52 (65545): Guest Log: -rw-rw-r--. 1 root root      6161 Apr 19 11:25 init_data.xml
2025-04-20 05:32:52 (65545): Guest Log: -rw-rw----. 1 root root    508893 Apr 19 11:24 input.tar.gz
2025-04-20 05:32:52 (65545): Guest Log: -rw-r--r--. 1 root root   2160640 Apr 19  2025 result.tar.gz
2025-04-20 05:32:52 (65545): Guest Log: -rw-rw----. 1 root root     17569 Apr 19 11:24 start_atlas.sh
2025-04-20 05:32:52 (65545): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-20 05:32:52 (65545): VM Completion File Detected.
2025-04-20 05:32:52 (65545): Powering off VM.
2025-04-20 05:32:53 (65545): Successfully stopped VM.
2025-04-20 05:32:53 (65545): Deregistering VM. (boinc_fc7cd5acf0b04a45, slot#0)
2025-04-20 05:32:54 (65545): Removing network bandwidth throttle group from VM.
2025-04-20 05:32:55 (65545): Removing VM from VirtualBox.
05:33:00 (65545): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN