Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
23:47:30 (15456): wrapper (7.7.26015): starting
23:47:30 (15456): wrapper: running run_atlas (--nthreads 12)
[2025-04-17 23:47:30] Arguments: --nthreads 12
[2025-04-17 23:47:30] Threads: 12
[2025-04-17 23:47:30] Checking for CVMFS
[2025-04-17 23:47:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-17 23:47:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-17 23:47:30] Running cvmfs_config stat atlas.cern.ch
[2025-04-17 23:47:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-17 23:47:30] 2.11.2.0 5876 85926 149276 144988 0 56 18323102 20275200 1 130560 0 22062866 99.969 7153517 52103 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-17 23:47:30] CVMFS is ok
[2025-04-17 23:47:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-17 23:47:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-17 23:47:30] Further information can be found at the LHC@home message board.
[2025-04-17 23:47:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-17 23:47:30] Checking for apptainer binary...
[2025-04-17 23:47:30] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-17 23:47:30] Running /usr/bin/apptainer --version
[2025-04-17 23:47:30] apptainer version 1.3.2-1.el7
[2025-04-17 23:47:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-17 23:47:32] c-205-31.aglt2.org
[2025-04-17 23:47:32] apptainer works
[2025-04-17 23:47:32] Set ATHENA_PROC_NUMBER=12
[2025-04-17 23:47:32] Set ATHENA_CORE_NUMBER=12
[2025-04-17 23:47:32] Starting ATLAS job with PandaID=6605946066
[2025-04-17 23:47:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-18 01:09:58]  *** The last 200 lines of the pilot log: ***
[2025-04-18 01:09:58]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-04-18 01:09:58]  is_altstaged=None
[2025-04-18 01:09:58]  is_tar=False
[2025-04-18 01:09:58]  lfn=log.44075483._061961.job.log.tgz.1
[2025-04-18 01:09:58]  mtime=0
[2025-04-18 01:09:58]  protocol_id=None
[2025-04-18 01:09:58]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-18 01:09:58]  replicas=None
[2025-04-18 01:09:58]  scope=mc23_13p6TeV
[2025-04-18 01:09:58]  status=None
[2025-04-18 01:09:58]  status_code=0
[2025-04-18 01:09:58]  storage_token=
[2025-04-18 01:09:58]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6605946066/log.44075483._061961.job.log.tgz.1
[2025-04-18 01:09:58]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/19/90/log.44075483._061961.job.log.tgz.1
[2025-04-18 01:09:58]  workdir=None
[2025-04-18 01:09:58] ]
[2025-04-18 01:09:58] 2025-04-18 05:09:36,385 | INFO     | transferring file log.44075483._061961.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6605946066/log.44075483._061961.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-04-18 01:09:58] 2025-04-18 05:09:36,385 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6605946066/log.44075483._061961.job.log.tgz.1 /tmp/boinchome/slots/0/log.44075483._061961.job
[2025-04-18 01:09:58] 2025-04-18 05:09:36,408 | INFO     | adding to output.list: log.44075483._061961.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/19/90/log.44075483._061961.job.log.tg
[2025-04-18 01:09:58] 2025-04-18 05:09:36,409 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-18 01:09:58] 2025-04-18 05:09:36,409 | INFO     | summary of transferred files:
[2025-04-18 01:09:58] 2025-04-18 05:09:36,409 | INFO     |  -- lfn=log.44075483._061961.job.log.tgz.1, status_code=0, status=transferred
[2025-04-18 01:09:58] 2025-04-18 05:09:36,410 | INFO     | stage-out finished correctly
[2025-04-18 01:09:58] 2025-04-18 05:09:37,385 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-18 01:09:58] 2025-04-18 05:09:37,568 | WARNING  | process 25479 can no longer be monitored (due to stat problems) - aborting
[2025-04-18 01:09:58] 2025-04-18 05:09:37,568 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6605946066/memory_monitor_summary.json (trf name=prmon)
[2025-04-18 01:09:58] 2025-04-18 05:09:37,657 | INFO     | number of running child processes to parent process 25479: 1
[2025-04-18 01:09:58] 2025-04-18 05:09:37,657 | INFO     | maximum number of monitored processes: 6
[2025-04-18 01:09:58] 2025-04-18 05:09:39,517 | INFO     | job 6605946066 has state=finished
[2025-04-18 01:09:58] 2025-04-18 05:09:39,517 | INFO     | preparing for final server update for job 6605946066 in state='finished'
[2025-04-18 01:09:58] 2025-04-18 05:09:39,517 | INFO     | this job has now completed (state=finished)
[2025-04-18 01:09:58] 2025-04-18 05:09:39,518 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-18 01:09:58] 2025-04-18 05:09:39,518 | INFO     | log transfer has been attempted: DONE
[2025-04-18 01:09:58] 2025-04-18 05:09:39,518 | INFO     | job 6605946066 has finished - writing final server update
[2025-04-18 01:09:58] 2025-04-18 05:09:39,518 | INFO     | total number of processed events: 400 (read)
[2025-04-18 01:09:58] 2025-04-18 05:09:39,520 | INFO     | executing command: lscpu
[2025-04-18 01:09:58] 2025-04-18 05:09:39,550 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-18 01:09:58] 2025-04-18 05:09:40,160 | INFO     | monitor loop #367: job 0:6605946066 is in state 'finished'
[2025-04-18 01:09:58] 2025-04-18 05:09:40,161 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-18 01:09:58] 2025-04-18 05:09:42,663 | INFO     | monitor loop #368: job 0:6605946066 is in state 'finished'
[2025-04-18 01:09:58] 2025-04-18 05:09:42,663 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-18 01:09:58] 2025-04-18 05:09:44,249 | INFO     | CPU arch script returned: x86-64-v2
[2025-04-18 01:09:58] 2025-04-18 05:09:44,249 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6605946066/memory_monitor_summary.json (trf name=prmon)
[2025-04-18 01:09:58] 2025-04-18 05:09:44,250 | INFO     | extracted standard info from prmon json
[2025-04-18 01:09:58] 2025-04-18 05:09:44,250 | INFO     | extracted standard memory fields from prmon json
[2025-04-18 01:09:58] 2025-04-18 05:09:44,250 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-18 01:09:58] 2025-04-18 05:09:44,250 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-18 01:09:58] 2025-04-18 05:09:44,251 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-18 01:09:58] 2025-04-18 05:09:44,252 | INFO     | fitting pss+swap vs Time
[2025-04-18 01:09:58] 2025-04-18 05:09:44,253 | INFO     | sum of square deviations: 120605052.0
[2025-04-18 01:09:58] 2025-04-18 05:09:44,253 | INFO     | sum of deviations: 20963334053.999992
[2025-04-18 01:09:58] 2025-04-18 05:09:44,253 | INFO     | mean x: 1744950595.0
[2025-04-18 01:09:58] 2025-04-18 05:09:44,253 | INFO     | mean y: 2533863.328767123
[2025-04-18 01:09:58] 2025-04-18 05:09:44,253 | INFO     | -- intersect: -303301362815.15405
[2025-04-18 01:09:58] 2025-04-18 05:09:44,253 | INFO     | intersect: -303301362815.15405
[2025-04-18 01:09:58] 2025-04-18 05:09:44,253 | INFO     | chi2: 1.8668858958320853
[2025-04-18 01:09:58] 2025-04-18 05:09:44,254 | INFO     | -- intersect: -303301362815.15405
[2025-04-18 01:09:58] 2025-04-18 05:09:44,254 | INFO     | current memory leak: 173.82 B/s (using 73 data points, chi2=1.87)
[2025-04-18 01:09:58] 2025-04-18 05:09:44,254 | INFO     | ..............................
[2025-04-18 01:09:58] 2025-04-18 05:09:44,254 | INFO     | . Timing measurements:
[2025-04-18 01:09:58] 2025-04-18 05:09:44,254 | INFO     | . get job = 0 s
[2025-04-18 01:09:58] 2025-04-18 05:09:44,254 | INFO     | . initial setup = 2 s
[2025-04-18 01:09:58] 2025-04-18 05:09:44,255 | INFO     | . payload setup = 7 s
[2025-04-18 01:09:58] 2025-04-18 05:09:44,255 | INFO     | . stage-in = 0 s
[2025-04-18 01:09:58] 2025-04-18 05:09:44,255 | INFO     | . payload execution = 4881 s
[2025-04-18 01:09:58] 2025-04-18 05:09:44,255 | INFO     | . stage-out = 0 s
[2025-04-18 01:09:58] 2025-04-18 05:09:44,255 | INFO     | . log creation = 0 s
[2025-04-18 01:09:58] 2025-04-18 05:09:44,255 | INFO     | ..............................
[2025-04-18 01:09:58] 2025-04-18 05:09:44,341 | INFO     | 
[2025-04-18 01:09:58] 2025-04-18 05:09:44,341 | INFO     | job summary report
[2025-04-18 01:09:58] 2025-04-18 05:09:44,341 | INFO     | --------------------------------------------------
[2025-04-18 01:09:58] 2025-04-18 05:09:44,341 | INFO     | PanDA job id: 6605946066
[2025-04-18 01:09:58] 2025-04-18 05:09:44,342 | INFO     | task id: 44075483
[2025-04-18 01:09:58] 2025-04-18 05:09:44,342 | INFO     | errors: (none)
[2025-04-18 01:09:58] 2025-04-18 05:09:44,342 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-18 01:09:58] 2025-04-18 05:09:44,342 | INFO     | pilot state: finished 
[2025-04-18 01:09:58] 2025-04-18 05:09:44,342 | INFO     | transexitcode: 0
[2025-04-18 01:09:58] 2025-04-18 05:09:44,342 | INFO     | exeerrorcode: 0
[2025-04-18 01:09:58] 2025-04-18 05:09:44,343 | INFO     | exeerrordiag: 
[2025-04-18 01:09:58] 2025-04-18 05:09:44,343 | INFO     | exitcode: 0
[2025-04-18 01:09:58] 2025-04-18 05:09:44,343 | INFO     | exitmsg: OK
[2025-04-18 01:09:58] 2025-04-18 05:09:44,343 | INFO     | cpuconsumptiontime: 46167 s
[2025-04-18 01:09:58] 2025-04-18 05:09:44,343 | INFO     | nevents: 400
[2025-04-18 01:09:58] 2025-04-18 05:09:44,343 | INFO     | neventsw: 0
[2025-04-18 01:09:58] 2025-04-18 05:09:44,344 | INFO     | pid: 25479
[2025-04-18 01:09:58] 2025-04-18 05:09:44,344 | INFO     | pgrp: 25479
[2025-04-18 01:09:58] 2025-04-18 05:09:44,344 | INFO     | corecount: 12
[2025-04-18 01:09:58] 2025-04-18 05:09:44,344 | INFO     | event service: False
[2025-04-18 01:09:58] 2025-04-18 05:09:44,344 | INFO     | sizes: {0: 2426602, 1: 2426801, 6: 2427007, 11: 2427035, 4893: 2453128, 4896: 2462069, 4897: 2462253, 4903: 2462423}
[2025-04-18 01:09:58] 2025-04-18 05:09:44,344 | INFO     | --------------------------------------------------
[2025-04-18 01:09:58] 2025-04-18 05:09:44,345 | INFO     | 
[2025-04-18 01:09:58] 2025-04-18 05:09:44,345 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-18 01:09:58] 2025-04-18 05:09:44,370 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-18 01:09:58] 2025-04-18 05:09:44,370 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-18 01:09:58] 2025-04-18 05:09:44,370 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-18 01:09:58] 2025-04-18 05:09:44,370 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-18 01:09:58] 2025-04-18 05:09:44,371 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-18 01:09:58] 2025-04-18 05:09:44,371 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-18 01:09:58] 2025-04-18 05:09:44,371 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-18 01:09:58] 2025-04-18 05:09:44,371 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-18 01:09:58] 2025-04-18 05:09:44,371 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-18 01:09:58] 2025-04-18 05:09:44,371 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-18 01:09:58] 2025-04-18 05:09:44,372 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-18 01:09:58] 2025-04-18 05:09:44,372 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-18 01:09:58] 2025-04-18 05:09:44,372 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-18 01:09:58] 2025-04-18 05:09:44,372 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-18 01:09:58] 2025-04-18 05:09:44,372 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-18 01:09:58] 2025-04-18 05:09:44,372 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-18 01:09:58] 2025-04-18 05:09:44,372 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-18 01:09:58] 2025-04-18 05:09:44,373 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-18 01:09:58] 2025-04-18 05:09:44,373 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-18 01:09:58] 2025-04-18 05:09:44,373 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-18 01:09:58] 2025-04-18 05:09:44,373 | INFO     | job 6605946066 has completed (purged errors)
[2025-04-18 01:09:58] 2025-04-18 05:09:44,373 | INFO     | overall cleanup function is called
[2025-04-18 01:09:58] 2025-04-18 05:09:45,381 | INFO     | --- collectZombieJob: --- 10, [25479]
[2025-04-18 01:09:58] 2025-04-18 05:09:45,382 | INFO     | zombie collector waiting for pid 25479
[2025-04-18 01:09:58] 2025-04-18 05:09:45,382 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-18 01:09:58] 2025-04-18 05:09:45,382 | INFO     | collected zombie processes
[2025-04-18 01:09:58] 2025-04-18 05:09:45,382 | INFO     | will attempt to kill all subprocesses of pid=25479
[2025-04-18 01:09:58] 2025-04-18 05:09:45,476 | INFO     | process IDs to be killed: [25479] (in reverse order)
[2025-04-18 01:09:58] 2025-04-18 05:09:45,530 | WARNING  | found no corresponding commands to process id(s)
[2025-04-18 01:09:58] 2025-04-18 05:09:45,530 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-18 01:09:58] 2025-04-18 05:09:45,534 | INFO     | did not find any defunct processes belonging to 25479
[2025-04-18 01:09:58] 2025-04-18 05:09:45,537 | INFO     | did not find any defunct processes belonging to 25479
[2025-04-18 01:09:58] 2025-04-18 05:09:45,538 | INFO     | ready for new job
[2025-04-18 01:09:58] 2025-04-18 05:09:45,538 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-18 01:09:58] 2025-04-18 05:09:45,539 | INFO     | **************************************
[2025-04-18 01:09:58] 2025-04-18 05:09:45,540 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-18 01:09:58] 2025-04-18 05:09:45,540 | INFO     | **************************************
[2025-04-18 01:09:58] 2025-04-18 05:09:45,540 | INFO     | 
[2025-04-18 01:09:58] 2025-04-18 05:09:45,540 | INFO     | architecture information:
[2025-04-18 01:09:58] 2025-04-18 05:09:45,541 | INFO     | executing command: cat /etc/os-release
[2025-04-18 01:09:58] 2025-04-18 05:09:45,556 | INFO     | cat /etc/os-release:
[2025-04-18 01:09:58] NAME="CentOS Linux"
[2025-04-18 01:09:58] VERSION="7 (Core)"
[2025-04-18 01:09:58] ID="centos"
[2025-04-18 01:09:58] ID_LIKE="rhel fedora"
[2025-04-18 01:09:58] VERSION_ID="7"
[2025-04-18 01:09:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-18 01:09:58] ANSI_COLOR="0;31"
[2025-04-18 01:09:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-18 01:09:58] HOME_URL="https://www.centos.org/"
[2025-04-18 01:09:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-18 01:09:58] 
[2025-04-18 01:09:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-18 01:09:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-18 01:09:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-18 01:09:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-18 01:09:58] 
[2025-04-18 01:09:58] 2025-04-18 05:09:45,557 | INFO     | **************************************
[2025-04-18 01:09:58] 2025-04-18 05:09:46,060 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-18 01:09:58] 2025-04-18 05:09:46,077 | INFO     | sufficient remaining disk space (29404168192 B)
[2025-04-18 01:09:58] 2025-04-18 05:09:46,077 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-18 01:09:58] 2025-04-18 05:09:46,077 | INFO     | current server update state: UPDATING_FINAL
[2025-04-18 01:09:58] 2025-04-18 05:09:46,078 | INFO     | update_server=False
[2025-04-18 01:09:58] 2025-04-18 05:09:46,078 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-18 01:09:58] 2025-04-18 05:09:46,078 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-18 01:09:58] 2025-04-18 05:09:46,171 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-18 01:09:58] 2025-04-18 05:09:46,172 | INFO     | aborting loop
[2025-04-18 01:09:58] 2025-04-18 05:09:46,575 | INFO     | all data control threads have been joined
[2025-04-18 01:09:58] 2025-04-18 05:09:46,618 | INFO     | found 0 job(s) in 20 queues
[2025-04-18 01:09:58] 2025-04-18 05:09:46,618 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-18 01:09:58] 2025-04-18 05:09:46,618 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-18 01:09:58] 2025-04-18 05:09:46,627 | INFO     | all payload control threads have been joined
[2025-04-18 01:09:58] 2025-04-18 05:09:47,009 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-18 01:09:58] 2025-04-18 05:09:47,083 | INFO     | [job] retrieve thread has finished
[2025-04-18 01:09:58] 2025-04-18 05:09:47,084 | INFO     | [job] queue monitor thread has finished
[2025-04-18 01:09:58] 2025-04-18 05:09:47,177 | INFO     | [job] job monitor thread has finished
[2025-04-18 01:09:58] 2025-04-18 05:09:47,314 | INFO     | [job] validate thread has finished
[2025-04-18 01:09:58] 2025-04-18 05:09:47,338 | INFO     | [payload] validate_pre thread has finished
[2025-04-18 01:09:58] 2025-04-18 05:09:47,489 | INFO     | [payload] failed_post thread has finished
[2025-04-18 01:09:58] 2025-04-18 05:09:47,499 | INFO     | all job control threads have been joined
[2025-04-18 01:09:58] 2025-04-18 05:09:47,581 | INFO     | [data] control thread has finished
[2025-04-18 01:09:58] 2025-04-18 05:09:47,589 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-18 01:09:58] 2025-04-18 05:09:47,613 | INFO     | [job] create_data_payload thread has finished
[2025-04-18 01:09:58] 2025-04-18 05:09:47,632 | INFO     | [payload] control thread has finished
[2025-04-18 01:09:58] 2025-04-18 05:09:47,814 | INFO     | [data] copytool_in thread has finished
[2025-04-18 01:09:58] 2025-04-18 05:09:47,975 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-18 01:09:58] 2025-04-18 05:09:48,072 | INFO     | [payload] validate_post thread has finished
[2025-04-18 01:09:58] 2025-04-18 05:09:48,453 | INFO     | [payload] execute_payloads thread has finished
[2025-04-18 01:09:58] 2025-04-18 05:09:48,504 | INFO     | [job] control thread has finished
[2025-04-18 01:09:58] 2025-04-18 05:09:49,015 | INFO     | [data] copytool_out thread has finished
[2025-04-18 01:09:58] 2025-04-18 05:09:51,981 | INFO     | [data] queue_monitor thread has finished
[2025-04-18 01:09:58] 2025-04-18 05:09:52,921 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140587667457856)>', '<ExcThread(monitor, started 140587047032576)>']
[2025-04-18 01:09:58] 2025-04-18 05:09:53,654 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-18 01:09:58] 2025-04-18 05:09:53,654 | INFO     | [monitor] control thread has ended
[2025-04-18 01:09:58] 2025-04-18 05:09:57,947 | INFO     | all workflow threads have been joined
[2025-04-18 01:09:58] 2025-04-18 05:09:57,947 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-18 01:09:58] 2025-04-18 05:09:57,947 | INFO     | traces error code: 0
[2025-04-18 01:09:58] 2025-04-18 05:09:57,948 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-18 01:09:58] 2025-04-18 05:09:58,027 [wrapper] ==== pilot stdout END ====
[2025-04-18 01:09:58] 2025-04-18 05:09:58,031 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-18 01:09:58] 2025-04-18 05:09:58,035 [wrapper] pilotpid: 19054
[2025-04-18 01:09:58] 2025-04-18 05:09:58,038 [wrapper] Pilot exit status: 0
[2025-04-18 01:09:58] 2025-04-18 05:09:58,054 [wrapper] pandaids: 6605946066
[2025-04-18 01:09:58] 2025-04-18 05:09:58,094 [wrapper] cleanup supervisor_pilot 15720 19055
[2025-04-18 01:09:58] 2025-04-18 05:09:58,098 [wrapper] Test setup, not cleaning
[2025-04-18 01:09:58] 2025-04-18 05:09:58,102 [wrapper] apfmon messages muted
[2025-04-18 01:09:58] 2025-04-18 05:09:58,106 [wrapper] ==== wrapper stdout END ====
[2025-04-18 01:09:58] 2025-04-18 05:09:58,110 [wrapper] ==== wrapper stderr END ====
[2025-04-18 01:09:58]  *** Error codes and diagnostics ***
[2025-04-18 01:09:58]     "exeErrorCode": 0,
[2025-04-18 01:09:58]     "exeErrorDiag": "",
[2025-04-18 01:09:58]     "pilotErrorCode": 0,
[2025-04-18 01:09:58]     "pilotErrorDiag": "",
[2025-04-18 01:09:58]  *** Listing of results directory ***
[2025-04-18 01:09:58] total 409208
[2025-04-18 01:09:58] -rw-r--r-- 1 boincer umatlas    495897 Apr 17 19:44 pilot3.tar.gz
[2025-04-18 01:09:58] -rw-r--r-- 1 boincer umatlas      5111 Apr 17 19:55 queuedata.json
[2025-04-18 01:09:58] -rwx------ 1 boincer umatlas     37140 Apr 17 19:56 runpilot2-wrapper.sh
[2025-04-18 01:09:58] -rw-r--r-- 1 boincer umatlas       100 Apr 17 23:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-18 01:09:58] -rwxr-xr-x 1 boincer umatlas      7986 Apr 17 23:47 run_atlas
[2025-04-18 01:09:58] -rw-r--r-- 1 boincer umatlas       105 Apr 17 23:47 job.xml
[2025-04-18 01:09:58] -rw-r--r-- 2 boincer umatlas 224136083 Apr 17 23:47 EVNT.44075481._002409.pool.root.1
[2025-04-18 01:09:58] -rw-r--r-- 2 boincer umatlas     17569 Apr 17 23:47 start_atlas.sh
[2025-04-18 01:09:58] drwxrwx--x 2 boincer umatlas      4096 Apr 17 23:47 shared
[2025-04-18 01:09:58] -rw-r--r-- 2 boincer umatlas    508895 Apr 17 23:47 input.tar.gz
[2025-04-18 01:09:58] -rw-r--r-- 1 boincer umatlas         0 Apr 17 23:47 boinc_lockfile
[2025-04-18 01:09:58] -rw-r--r-- 1 boincer umatlas      2578 Apr 17 23:47 pandaJob.out
[2025-04-18 01:09:58] -rw------- 1 boincer umatlas       424 Apr 17 23:47 setup.sh.local
[2025-04-18 01:09:58] -rw------- 1 boincer umatlas    990250 Apr 17 23:47 agis_schedconf.cvmfs.json
[2025-04-18 01:09:58] -rw------- 1 boincer umatlas   1618536 Apr 17 23:47 agis_ddmendpoints.agis.ALL.json
[2025-04-18 01:09:58] drwx------ 4 boincer umatlas      4096 Apr 17 23:47 pilot3
[2025-04-18 01:09:58] -rw------- 1 boincer umatlas 189396789 Apr 18 01:09 HITS.44075483._061961.pool.root.1
[2025-04-18 01:09:58] -rw-r--r-- 1 boincer umatlas       529 Apr 18 01:09 boinc_task_state.xml
[2025-04-18 01:09:58] -rw-r--r-- 1 boincer umatlas      5868 Apr 18 01:09 init_data.xml
[2025-04-18 01:09:58] -rw------- 1 boincer umatlas      1048 Apr 18 01:09 memory_monitor_summary.json
[2025-04-18 01:09:58] -rw------- 1 boincer umatlas    354230 Apr 18 01:09 log.44075483._061961.job.log.tgz.1
[2025-04-18 01:09:58] -rw------- 1 boincer umatlas      7753 Apr 18 01:09 heartbeat.json
[2025-04-18 01:09:58] -rw------- 1 boincer umatlas        95 Apr 18 01:09 pilot_heartbeat.json
[2025-04-18 01:09:58] -rw-r--r-- 1 boincer umatlas      8192 Apr 18 01:09 boinc_mmap_file
[2025-04-18 01:09:58] -rw-r--r-- 1 boincer umatlas        27 Apr 18 01:09 wrapper_checkpoint.txt
[2025-04-18 01:09:58] -rw------- 1 boincer umatlas      4353 Apr 18 01:09 pilotlog.txt
[2025-04-18 01:09:58] -rw------- 1 boincer umatlas    466784 Apr 18 01:09 log.44075483._061961.job.log.1
[2025-04-18 01:09:58] -rw------- 1 boincer umatlas       357 Apr 18 01:09 output.list
[2025-04-18 01:09:58] -rw-r--r-- 1 boincer umatlas       620 Apr 18 01:09 runtime_log
[2025-04-18 01:09:58] -rw------- 1 boincer umatlas    839680 Apr 18 01:09 result.tar.gz
[2025-04-18 01:09:58] -rw------- 1 boincer umatlas       658 Apr 18 01:09 ThRLDmOHoP7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmHzdLDmG8KMem.diag
[2025-04-18 01:09:58] -rw-r--r-- 1 boincer umatlas     11015 Apr 18 01:09 runtime_log.err
[2025-04-18 01:09:58] -rw-r--r-- 1 boincer umatlas     21371 Apr 18 01:09 stderr.txt
[2025-04-18 01:09:58] HITS file was successfully produced:
[2025-04-18 01:09:58] -rw------- 1 boincer umatlas 189396789 Apr 18 01:09 shared/HITS.pool.root.1
[2025-04-18 01:09:58]  *** Contents of shared directory: ***
[2025-04-18 01:09:58] total 405184
[2025-04-18 01:09:58] -rw-r--r-- 2 boincer umatlas 224136083 Apr 17 23:47 ATLAS.root_0
[2025-04-18 01:09:58] -rw-r--r-- 2 boincer umatlas     17569 Apr 17 23:47 start_atlas.sh
[2025-04-18 01:09:58] -rw-r--r-- 2 boincer umatlas    508895 Apr 17 23:47 input.tar.gz
[2025-04-18 01:09:58] -rw------- 1 boincer umatlas 189396789 Apr 18 01:09 HITS.pool.root.1
[2025-04-18 01:09:58] -rw------- 1 boincer umatlas    839680 Apr 18 01:09 result.tar.gz
01:10:00 (15456): run_atlas exited; CPU time 46146.223497
01:10:00 (15456): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN