Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
14:41:49 (968430): wrapper (7.7.26015): starting
14:41:49 (968430): wrapper: running run_atlas (--nthreads 4)
[2025-04-18 14:41:49] Arguments: --nthreads 4
[2025-04-18 14:41:49] Threads: 4
[2025-04-18 14:41:49] Checking for CVMFS
[2025-04-18 14:41:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-18 14:41:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-18 14:41:49] Running cvmfs_config stat atlas.cern.ch
[2025-04-18 14:41:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-18 14:41:49] 2.9.2.0 2961 3042 93352 145002 0 56 25393005 36864000 0 130560 0 2449940 99.991 776551 6289 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-04-18 14:41:49] CVMFS is ok
[2025-04-18 14:41:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-18 14:41:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-18 14:41:49] Further information can be found at the LHC@home message board.
[2025-04-18 14:41:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-18 14:41:49] Checking for apptainer binary...
[2025-04-18 14:41:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-18 14:41:49] Running /usr/bin/apptainer --version
[2025-04-18 14:41:49] apptainer version 1.3.6-6.1
[2025-04-18 14:41:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-18 14:41:49] magicA250
[2025-04-18 14:41:49] apptainer works
[2025-04-18 14:41:49] Set ATHENA_PROC_NUMBER=4
[2025-04-18 14:41:49] Set ATHENA_CORE_NUMBER=4
[2025-04-18 14:41:49] Starting ATLAS job with PandaID=6605945024
[2025-04-18 14:41:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-18 16:02:06]  *** The last 200 lines of the pilot log: ***
[2025-04-18 16:02:06]  is_tar=False
[2025-04-18 16:02:06]  lfn=log.44075483._061380.job.log.tgz.1
[2025-04-18 16:02:06]  mtime=0
[2025-04-18 16:02:06]  protocol_id=None
[2025-04-18 16:02:06]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-18 16:02:06]  replicas=None
[2025-04-18 16:02:06]  scope=mc23_13p6TeV
[2025-04-18 16:02:06]  status=None
[2025-04-18 16:02:06]  status_code=0
[2025-04-18 16:02:06]  storage_token=
[2025-04-18 16:02:06]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6605945024/log.44075483._061380.job.log.tgz.1
[2025-04-18 16:02:06]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f0/1a/log.44075483._061380.job.log.tgz.1
[2025-04-18 16:02:06]  workdir=None
[2025-04-18 16:02:06] ]
[2025-04-18 16:02:06] 2025-04-18 14:01:42,053 | INFO     | transferring file log.44075483._061380.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6605945024/log.44075483._061380.job.log.tgz.1 to /local/data/boinc/
[2025-04-18 16:02:06] 2025-04-18 14:01:42,053 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6605945024/log.44075483._061380.job.log.tgz.1 /local/data/boinc/slots/0/log.44075483._0613
[2025-04-18 16:02:06] 2025-04-18 14:01:42,072 | INFO     | adding to output.list: log.44075483._061380.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f0/1a/log.44075483._061380.job.log.tg
[2025-04-18 16:02:06] 2025-04-18 14:01:42,073 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-18 16:02:06] 2025-04-18 14:01:42,073 | INFO     | summary of transferred files:
[2025-04-18 16:02:06] 2025-04-18 14:01:42,073 | INFO     |  -- lfn=log.44075483._061380.job.log.tgz.1, status_code=0, status=transferred
[2025-04-18 16:02:06] 2025-04-18 14:01:42,073 | INFO     | stage-out finished correctly
[2025-04-18 16:02:06] 2025-04-18 14:01:42,114 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-18 16:02:06] 2025-04-18 14:01:42,294 | WARNING  | process 978717 can no longer be monitored (due to stat problems) - aborting
[2025-04-18 16:02:06] 2025-04-18 14:01:42,294 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6605945024/memory_monitor_summary.json (trf name=prmon)
[2025-04-18 16:02:06] 2025-04-18 14:01:42,335 | INFO     | number of running child processes to parent process 978717: 1
[2025-04-18 16:02:06] 2025-04-18 14:01:42,335 | INFO     | maximum number of monitored processes: 6
[2025-04-18 16:02:06] 2025-04-18 14:01:42,583 | INFO     | job 6605945024 has state=finished
[2025-04-18 16:02:06] 2025-04-18 14:01:42,583 | INFO     | preparing for final server update for job 6605945024 in state='finished'
[2025-04-18 16:02:06] 2025-04-18 14:01:42,584 | INFO     | this job has now completed (state=finished)
[2025-04-18 16:02:06] 2025-04-18 14:01:42,584 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-18 16:02:06] 2025-04-18 14:01:42,584 | INFO     | log transfer has been attempted: DONE
[2025-04-18 16:02:06] 2025-04-18 14:01:42,584 | INFO     | job 6605945024 has finished - writing final server update
[2025-04-18 16:02:06] 2025-04-18 14:01:42,584 | INFO     | total number of processed events: 400 (read)
[2025-04-18 16:02:06] 2025-04-18 14:01:42,585 | INFO     | executing command: lscpu
[2025-04-18 16:02:06] 2025-04-18 14:01:42,608 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-18 16:02:06] 2025-04-18 14:01:44,838 | INFO     | monitor loop #368: job 0:6605945024 is in state 'finished'
[2025-04-18 16:02:06] 2025-04-18 14:01:44,838 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-18 16:02:06] 2025-04-18 14:01:47,342 | INFO     | monitor loop #369: job 0:6605945024 is in state 'finished'
[2025-04-18 16:02:06] 2025-04-18 14:01:47,342 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-18 16:02:06] 2025-04-18 14:01:47,480 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-18 16:02:06] 2025-04-18 14:01:47,480 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6605945024/memory_monitor_summary.json (trf name=prmon)
[2025-04-18 16:02:06] 2025-04-18 14:01:47,481 | INFO     | extracted standard info from prmon json
[2025-04-18 16:02:06] 2025-04-18 14:01:47,481 | INFO     | extracted standard memory fields from prmon json
[2025-04-18 16:02:06] 2025-04-18 14:01:47,481 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-18 16:02:06] 2025-04-18 14:01:47,481 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-18 16:02:06] 2025-04-18 14:01:47,481 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-18 16:02:06] 2025-04-18 14:01:47,482 | INFO     | fitting pss+swap vs Time
[2025-04-18 16:02:06] 2025-04-18 14:01:47,482 | INFO     | sum of square deviations: 110960220.0
[2025-04-18 16:02:06] 2025-04-18 14:01:47,482 | INFO     | sum of deviations: 4001250103.9999986
[2025-04-18 16:02:06] 2025-04-18 14:01:47,482 | INFO     | mean x: 1744982581.0
[2025-04-18 16:02:06] 2025-04-18 14:01:47,482 | INFO     | mean y: 2401124.7887323946
[2025-04-18 16:02:06] 2025-04-18 14:01:47,482 | INFO     | -- intersect: -62922057151.379395
[2025-04-18 16:02:06] 2025-04-18 14:01:47,482 | INFO     | intersect: -62922057151.379395
[2025-04-18 16:02:06] 2025-04-18 14:01:47,482 | INFO     | chi2: 1.0244075368172123
[2025-04-18 16:02:06] 2025-04-18 14:01:47,482 | INFO     | -- intersect: -62922057151.379395
[2025-04-18 16:02:06] 2025-04-18 14:01:47,482 | INFO     | current memory leak: 36.06 B/s (using 71 data points, chi2=1.02)
[2025-04-18 16:02:06] 2025-04-18 14:01:47,482 | INFO     | ..............................
[2025-04-18 16:02:06] 2025-04-18 14:01:47,482 | INFO     | . Timing measurements:
[2025-04-18 16:02:06] 2025-04-18 14:01:47,482 | INFO     | . get job = 0 s
[2025-04-18 16:02:06] 2025-04-18 14:01:47,482 | INFO     | . initial setup = 1 s
[2025-04-18 16:02:06] 2025-04-18 14:01:47,483 | INFO     | . payload setup = 4 s
[2025-04-18 16:02:06] 2025-04-18 14:01:47,483 | INFO     | . stage-in = 0 s
[2025-04-18 16:02:06] 2025-04-18 14:01:47,483 | INFO     | . payload execution = 4761 s
[2025-04-18 16:02:06] 2025-04-18 14:01:47,483 | INFO     | . stage-out = 0 s
[2025-04-18 16:02:06] 2025-04-18 14:01:47,483 | INFO     | . log creation = 0 s
[2025-04-18 16:02:06] 2025-04-18 14:01:47,483 | INFO     | ..............................
[2025-04-18 16:02:06] 2025-04-18 14:01:47,525 | INFO     | 
[2025-04-18 16:02:06] 2025-04-18 14:01:47,525 | INFO     | job summary report
[2025-04-18 16:02:06] 2025-04-18 14:01:47,525 | INFO     | --------------------------------------------------
[2025-04-18 16:02:06] 2025-04-18 14:01:47,525 | INFO     | PanDA job id: 6605945024
[2025-04-18 16:02:06] 2025-04-18 14:01:47,525 | INFO     | task id: 44075483
[2025-04-18 16:02:06] 2025-04-18 14:01:47,525 | INFO     | errors: (none)
[2025-04-18 16:02:06] 2025-04-18 14:01:47,525 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-18 16:02:06] 2025-04-18 14:01:47,525 | INFO     | pilot state: finished 
[2025-04-18 16:02:06] 2025-04-18 14:01:47,525 | INFO     | transexitcode: 0
[2025-04-18 16:02:06] 2025-04-18 14:01:47,525 | INFO     | exeerrorcode: 0
[2025-04-18 16:02:06] 2025-04-18 14:01:47,525 | INFO     | exeerrordiag: 
[2025-04-18 16:02:06] 2025-04-18 14:01:47,525 | INFO     | exitcode: 0
[2025-04-18 16:02:06] 2025-04-18 14:01:47,525 | INFO     | exitmsg: OK
[2025-04-18 16:02:06] 2025-04-18 14:01:47,525 | INFO     | cpuconsumptiontime: 16379 s
[2025-04-18 16:02:06] 2025-04-18 14:01:47,525 | INFO     | nevents: 400
[2025-04-18 16:02:06] 2025-04-18 14:01:47,525 | INFO     | neventsw: 0
[2025-04-18 16:02:06] 2025-04-18 14:01:47,526 | INFO     | pid: 978717
[2025-04-18 16:02:06] 2025-04-18 14:01:47,526 | INFO     | pgrp: 978717
[2025-04-18 16:02:06] 2025-04-18 14:01:47,526 | INFO     | corecount: 4
[2025-04-18 16:02:06] 2025-04-18 14:01:47,526 | INFO     | event service: False
[2025-04-18 16:02:06] 2025-04-18 14:01:47,526 | INFO     | sizes: {0: 2426653, 1: 2426852, 4: 2427058, 11: 2427086, 4769: 2453320, 4770: 2462451, 4775: 2462565}
[2025-04-18 16:02:06] 2025-04-18 14:01:47,526 | INFO     | --------------------------------------------------
[2025-04-18 16:02:06] 2025-04-18 14:01:47,526 | INFO     | 
[2025-04-18 16:02:06] 2025-04-18 14:01:47,526 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-04-18 16:02:06] 2025-04-18 14:01:47,545 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-18 16:02:06] 2025-04-18 14:01:47,546 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-18 16:02:06] 2025-04-18 14:01:47,546 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-18 16:02:06] 2025-04-18 14:01:47,546 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-18 16:02:06] 2025-04-18 14:01:47,546 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-18 16:02:06] 2025-04-18 14:01:47,546 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-18 16:02:06] 2025-04-18 14:01:47,546 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-18 16:02:06] 2025-04-18 14:01:47,546 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-18 16:02:06] 2025-04-18 14:01:47,546 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-18 16:02:06] 2025-04-18 14:01:47,546 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-18 16:02:06] 2025-04-18 14:01:47,546 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-18 16:02:06] 2025-04-18 14:01:47,546 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-18 16:02:06] 2025-04-18 14:01:47,546 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-18 16:02:06] 2025-04-18 14:01:47,546 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-18 16:02:06] 2025-04-18 14:01:47,546 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-18 16:02:06] 2025-04-18 14:01:47,546 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-18 16:02:06] 2025-04-18 14:01:47,546 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-18 16:02:06] 2025-04-18 14:01:47,546 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-18 16:02:06] 2025-04-18 14:01:47,546 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-18 16:02:06] 2025-04-18 14:01:47,546 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-18 16:02:06] 2025-04-18 14:01:47,546 | INFO     | job 6605945024 has completed (purged errors)
[2025-04-18 16:02:06] 2025-04-18 14:01:47,546 | INFO     | overall cleanup function is called
[2025-04-18 16:02:06] 2025-04-18 14:01:48,553 | INFO     | --- collectZombieJob: --- 10, [978717]
[2025-04-18 16:02:06] 2025-04-18 14:01:48,553 | INFO     | zombie collector waiting for pid 978717
[2025-04-18 16:02:06] 2025-04-18 14:01:48,553 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-18 16:02:06] 2025-04-18 14:01:48,553 | INFO     | collected zombie processes
[2025-04-18 16:02:06] 2025-04-18 14:01:48,553 | INFO     | will attempt to kill all subprocesses of pid=978717
[2025-04-18 16:02:06] 2025-04-18 14:01:48,599 | INFO     | process IDs to be killed: [978717] (in reverse order)
[2025-04-18 16:02:06] 2025-04-18 14:01:48,634 | WARNING  | found no corresponding commands to process id(s)
[2025-04-18 16:02:06] 2025-04-18 14:01:48,634 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-18 16:02:06] 2025-04-18 14:01:48,636 | INFO     | did not find any defunct processes belonging to 978717
[2025-04-18 16:02:06] 2025-04-18 14:01:48,637 | INFO     | did not find any defunct processes belonging to 978717
[2025-04-18 16:02:06] 2025-04-18 14:01:48,637 | INFO     | ready for new job
[2025-04-18 16:02:06] 2025-04-18 14:01:48,637 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-18 16:02:06] 2025-04-18 14:01:48,638 | INFO     | **************************************
[2025-04-18 16:02:06] 2025-04-18 14:01:48,638 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-18 16:02:06] 2025-04-18 14:01:48,638 | INFO     | **************************************
[2025-04-18 16:02:06] 2025-04-18 14:01:48,638 | INFO     | 
[2025-04-18 16:02:06] 2025-04-18 14:01:48,639 | INFO     | architecture information:
[2025-04-18 16:02:06] 2025-04-18 14:01:48,639 | INFO     | executing command: cat /etc/os-release
[2025-04-18 16:02:06] 2025-04-18 14:01:48,654 | INFO     | cat /etc/os-release:
[2025-04-18 16:02:06] NAME="CentOS Linux"
[2025-04-18 16:02:06] VERSION="7 (Core)"
[2025-04-18 16:02:06] ID="centos"
[2025-04-18 16:02:06] ID_LIKE="rhel fedora"
[2025-04-18 16:02:06] VERSION_ID="7"
[2025-04-18 16:02:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-18 16:02:06] ANSI_COLOR="0;31"
[2025-04-18 16:02:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-18 16:02:06] HOME_URL="https://www.centos.org/"
[2025-04-18 16:02:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-18 16:02:06] 
[2025-04-18 16:02:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-18 16:02:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-18 16:02:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-18 16:02:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-18 16:02:06] 
[2025-04-18 16:02:06] 2025-04-18 14:01:48,654 | INFO     | **************************************
[2025-04-18 16:02:06] 2025-04-18 14:01:49,157 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-04-18 16:02:06] 2025-04-18 14:01:49,174 | INFO     | sufficient remaining disk space (330118987776 B)
[2025-04-18 16:02:06] 2025-04-18 14:01:49,174 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-18 16:02:06] 2025-04-18 14:01:49,174 | INFO     | current server update state: UPDATING_FINAL
[2025-04-18 16:02:06] 2025-04-18 14:01:49,174 | INFO     | update_server=False
[2025-04-18 16:02:06] 2025-04-18 14:01:49,174 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-18 16:02:06] 2025-04-18 14:01:49,175 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-18 16:02:06] 2025-04-18 14:01:49,175 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-18 16:02:06] 2025-04-18 14:01:49,175 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-18 16:02:06] 2025-04-18 14:01:49,175 | INFO     | aborting loop
[2025-04-18 16:02:06] 2025-04-18 14:01:49,175 | INFO     | found 0 job(s) in 20 queues
[2025-04-18 16:02:06] 2025-04-18 14:01:49,175 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-18 16:02:06] 2025-04-18 14:01:49,175 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-18 16:02:06] 2025-04-18 14:01:49,246 | INFO     | all data control threads have been joined
[2025-04-18 16:02:06] 2025-04-18 14:01:49,381 | INFO     | all payload control threads have been joined
[2025-04-18 16:02:06] 2025-04-18 14:01:50,125 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-18 16:02:06] 2025-04-18 14:01:50,177 | INFO     | [job] queue monitor thread has finished
[2025-04-18 16:02:06] 2025-04-18 14:01:50,177 | INFO     | [job] retrieve thread has finished
[2025-04-18 16:02:06] 2025-04-18 14:01:50,177 | INFO     | [job] job monitor thread has finished
[2025-04-18 16:02:06] 2025-04-18 14:01:50,252 | INFO     | [data] control thread has finished
[2025-04-18 16:02:06] 2025-04-18 14:01:50,305 | INFO     | [payload] validate_post thread has finished
[2025-04-18 16:02:06] 2025-04-18 14:01:50,387 | INFO     | [payload] control thread has finished
[2025-04-18 16:02:06] 2025-04-18 14:01:50,410 | INFO     | [data] copytool_in thread has finished
[2025-04-18 16:02:06] 2025-04-18 14:01:50,458 | INFO     | [payload] failed_post thread has finished
[2025-04-18 16:02:06] 2025-04-18 14:01:50,738 | INFO     | all job control threads have been joined
[2025-04-18 16:02:06] 2025-04-18 14:01:51,039 | INFO     | [job] validate thread has finished
[2025-04-18 16:02:06] 2025-04-18 14:01:51,187 | INFO     | [job] create_data_payload thread has finished
[2025-04-18 16:02:06] 2025-04-18 14:01:51,258 | INFO     | [payload] validate_pre thread has finished
[2025-04-18 16:02:06] 2025-04-18 14:01:51,265 | INFO     | [payload] execute_payloads thread has finished
[2025-04-18 16:02:06] 2025-04-18 14:01:51,744 | INFO     | [job] control thread has finished
[2025-04-18 16:02:06] 2025-04-18 14:01:52,131 | INFO     | [data] copytool_out thread has finished
[2025-04-18 16:02:06] 2025-04-18 14:01:52,666 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-18 16:02:06] 2025-04-18 14:01:56,673 | INFO     | [data] queue_monitor thread has finished
[2025-04-18 16:02:06] 2025-04-18 14:02:00,107 | INFO     | job.realtimelogging is not enabled
[2025-04-18 16:02:06] 2025-04-18 14:02:01,112 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-18 16:02:06] 2025-04-18 14:02:01,295 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140267364153152)>', '<ExcThread(monitor, started 140265905972992)>']
[2025-04-18 16:02:06] 2025-04-18 14:02:02,244 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-18 16:02:06] 2025-04-18 14:02:02,244 | INFO     | [monitor] control thread has ended
[2025-04-18 16:02:06] 2025-04-18 14:02:06,321 | INFO     | all workflow threads have been joined
[2025-04-18 16:02:06] 2025-04-18 14:02:06,321 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-18 16:02:06] 2025-04-18 14:02:06,321 | INFO     | traces error code: 0
[2025-04-18 16:02:06] 2025-04-18 14:02:06,321 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-18 16:02:06] 2025-04-18 14:02:06,402 [wrapper] ==== pilot stdout END ====
[2025-04-18 16:02:06] 2025-04-18 14:02:06,406 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-18 16:02:06] 2025-04-18 14:02:06,410 [wrapper] pilotpid: 972163
[2025-04-18 16:02:06] 2025-04-18 14:02:06,414 [wrapper] Pilot exit status: 0
[2025-04-18 16:02:06] 2025-04-18 14:02:06,426 [wrapper] pandaids: 6605945024
[2025-04-18 16:02:06] 2025-04-18 14:02:06,449 [wrapper] cleanup supervisor_pilot  990935 972164
[2025-04-18 16:02:06] 2025-04-18 14:02:06,453 [wrapper] Test setup, not cleaning
[2025-04-18 16:02:06] 2025-04-18 14:02:06,458 [wrapper] apfmon messages muted
[2025-04-18 16:02:06] 2025-04-18 14:02:06,461 [wrapper] ==== wrapper stdout END ====
[2025-04-18 16:02:06] 2025-04-18 14:02:06,465 [wrapper] ==== wrapper stderr END ====
[2025-04-18 16:02:06]  *** Error codes and diagnostics ***
[2025-04-18 16:02:06]     "exeErrorCode": 0,
[2025-04-18 16:02:06]     "exeErrorDiag": "",
[2025-04-18 16:02:06]     "pilotErrorCode": 0,
[2025-04-18 16:02:06]     "pilotErrorDiag": "",
[2025-04-18 16:02:06]  *** Listing of results directory ***
[2025-04-18 16:02:06] total 415968
[2025-04-18 16:02:06] -rw-r--r-- 1 boinc boinc    495897 Apr 18 00:47 pilot3.tar.gz
[2025-04-18 16:02:06] -rw-r--r-- 1 boinc boinc      5111 Apr 18 00:49 queuedata.json
[2025-04-18 16:02:06] -rwx------ 1 boinc boinc     37140 Apr 18 00:50 runpilot2-wrapper.sh
[2025-04-18 16:02:06] -rw-r--r-- 1 boinc boinc       100 Apr 18 14:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-18 16:02:06] -rwxr-xr-x 1 boinc boinc      7986 Apr 18 14:41 run_atlas
[2025-04-18 16:02:06] -rw-r--r-- 1 boinc boinc       105 Apr 18 14:41 job.xml
[2025-04-18 16:02:06] -rw-r--r-- 2 boinc boinc 223046932 Apr 18 14:41 EVNT.44075481._002386.pool.root.1
[2025-04-18 16:02:06] -rw-r--r-- 1 boinc boinc      6862 Apr 18 14:41 init_data.xml
[2025-04-18 16:02:06] drwxrwx--x 2 boinc boinc      4096 Apr 18 14:41 shared
[2025-04-18 16:02:06] -rw-r--r-- 2 boinc boinc    508886 Apr 18 14:41 input.tar.gz
[2025-04-18 16:02:06] -rw-r--r-- 2 boinc boinc     17569 Apr 18 14:41 start_atlas.sh
[2025-04-18 16:02:06] -rw-r--r-- 1 boinc boinc         0 Apr 18 14:41 boinc_lockfile
[2025-04-18 16:02:06] -rw-r--r-- 1 boinc boinc      2577 Apr 18 14:41 pandaJob.out
[2025-04-18 16:02:06] -rw------- 1 boinc boinc       424 Apr 18 14:41 setup.sh.local
[2025-04-18 16:02:06] -rw------- 1 boinc boinc    990604 Apr 18 14:41 agis_schedconf.cvmfs.json
[2025-04-18 16:02:06] -rw------- 1 boinc boinc   1618536 Apr 18 14:41 agis_ddmendpoints.agis.ALL.json
[2025-04-18 16:02:06] drwx------ 4 boinc boinc      4096 Apr 18 14:41 pilot3
[2025-04-18 16:02:06] -rw------- 1 boinc boinc 197652057 Apr 18 16:01 HITS.44075483._061380.pool.root.1
[2025-04-18 16:02:06] -rw------- 1 boinc boinc        95 Apr 18 16:01 pilot_heartbeat.json
[2025-04-18 16:02:06] -rw-r--r-- 1 boinc boinc       529 Apr 18 16:01 boinc_task_state.xml
[2025-04-18 16:02:06] -rw------- 1 boinc boinc      1025 Apr 18 16:01 memory_monitor_summary.json
[2025-04-18 16:02:06] -rw------- 1 boinc boinc    228969 Apr 18 16:01 log.44075483._061380.job.log.tgz.1
[2025-04-18 16:02:06] -rw------- 1 boinc boinc      7672 Apr 18 16:01 heartbeat.json
[2025-04-18 16:02:06] -rw-r--r-- 1 boinc boinc      8192 Apr 18 16:02 boinc_mmap_file
[2025-04-18 16:02:06] -rw-r--r-- 1 boinc boinc        27 Apr 18 16:02 wrapper_checkpoint.txt
[2025-04-18 16:02:06] -rw------- 1 boinc boinc      4552 Apr 18 16:02 pilotlog.txt
[2025-04-18 16:02:06] -rw------- 1 boinc boinc    466834 Apr 18 16:02 log.44075483._061380.job.log.1
[2025-04-18 16:02:06] -rw------- 1 boinc boinc       357 Apr 18 16:02 output.list
[2025-04-18 16:02:06] -rw-r--r-- 1 boinc boinc       620 Apr 18 16:02 runtime_log
[2025-04-18 16:02:06] -rw------- 1 boinc boinc    716800 Apr 18 16:02 result.tar.gz
[2025-04-18 16:02:06] -rw-r--r-- 1 boinc boinc     11114 Apr 18 16:02 runtime_log.err
[2025-04-18 16:02:06] -rw------- 1 boinc boinc       661 Apr 18 16:02 OfPLDmDFnP7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmgudLDmqo4gwm.diag
[2025-04-18 16:02:06] -rw-r--r-- 1 boinc boinc     21482 Apr 18 16:02 stderr.txt
[2025-04-18 16:02:06] HITS file was successfully produced:
[2025-04-18 16:02:06] -rw------- 1 boinc boinc 197652057 Apr 18 16:01 shared/HITS.pool.root.1
[2025-04-18 16:02:06]  *** Contents of shared directory: ***
[2025-04-18 16:02:06] total 412068
[2025-04-18 16:02:06] -rw-r--r-- 2 boinc boinc 223046932 Apr 18 14:41 ATLAS.root_0
[2025-04-18 16:02:06] -rw-r--r-- 2 boinc boinc    508886 Apr 18 14:41 input.tar.gz
[2025-04-18 16:02:06] -rw-r--r-- 2 boinc boinc     17569 Apr 18 14:41 start_atlas.sh
[2025-04-18 16:02:06] -rw------- 1 boinc boinc 197652057 Apr 18 16:01 HITS.pool.root.1
[2025-04-18 16:02:06] -rw------- 1 boinc boinc    716800 Apr 18 16:02 result.tar.gz
16:02:08 (968430): run_atlas exited; CPU time 16388.349092
16:02:08 (968430): called boinc_finish(0)

</stderr_txt>
]]>

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