Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:09:38 (1942502): wrapper (7.7.26015): starting
10:09:38 (1942502): wrapper: running run_atlas (--nthreads 12)
[2025-04-18 10:09:38] Arguments: --nthreads 12
[2025-04-18 10:09:38] Threads: 12
[2025-04-18 10:09:38] Checking for CVMFS
[2025-04-18 10:09:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-18 10:09:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-18 10:09:38] Running cvmfs_config stat atlas.cern.ch
[2025-04-18 10:09:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-18 10:09:39] 2.11.5.0 2157 21619 301792 145009 3 101 39833616 45568000 8867 130560 0 201736362 99.722 212014255 24621 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-04-18 10:09:39] CVMFS is ok
[2025-04-18 10:09:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-18 10:09:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-18 10:09:39] Further information can be found at the LHC@home message board.
[2025-04-18 10:09:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-18 10:09:39] Checking for apptainer binary...
[2025-04-18 10:09:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-18 10:09:39] Running /usr/bin/apptainer --version
[2025-04-18 10:09:39] apptainer version 1.3.5-1.el9
[2025-04-18 10:09:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-18 10:09:39] WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0084.triumf.lcg
[2025-04-18 10:09:39] apptainer works
[2025-04-18 10:09:39] Set ATHENA_PROC_NUMBER=12
[2025-04-18 10:09:39] Set ATHENA_CORE_NUMBER=12
[2025-04-18 10:09:39] Starting ATLAS job with PandaID=6605944731
[2025-04-18 10:09:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-18 11:41:07]  *** The last 200 lines of the pilot log: ***
[2025-04-18 11:41:07]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-04-18 11:41:07]  is_altstaged=None
[2025-04-18 11:41:07]  is_tar=False
[2025-04-18 11:41:07]  lfn=log.44075483._061324.job.log.tgz.1
[2025-04-18 11:41:07]  mtime=0
[2025-04-18 11:41:07]  protocol_id=None
[2025-04-18 11:41:07]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-18 11:41:07]  replicas=None
[2025-04-18 11:41:07]  scope=mc23_13p6TeV
[2025-04-18 11:41:07]  status=None
[2025-04-18 11:41:07]  status_code=0
[2025-04-18 11:41:07]  storage_token=
[2025-04-18 11:41:07]  surl=/home/boinc/slots/0/PanDA_Pilot-6605944731/log.44075483._061324.job.log.tgz.1
[2025-04-18 11:41:07]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a5/2c/log.44075483._061324.job.log.tgz.1
[2025-04-18 11:41:07]  workdir=None
[2025-04-18 11:41:07] ]
[2025-04-18 11:41:07] 2025-04-18 18:40:47,908 | INFO     | transferring file log.44075483._061324.job.log.tgz.1 from /home/boinc/slots/0/PanDA_Pilot-6605944731/log.44075483._061324.job.log.tgz.1 to /home/boinc/slots/0/log.
[2025-04-18 11:41:07] 2025-04-18 18:40:47,909 | INFO     | executing command: /usr/bin/env mv /home/boinc/slots/0/PanDA_Pilot-6605944731/log.44075483._061324.job.log.tgz.1 /home/boinc/slots/0/log.44075483._061324.job.log.t
[2025-04-18 11:41:07] 2025-04-18 18:40:47,921 | INFO     | adding to output.list: log.44075483._061324.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a5/2c/log.44075483._061324.job.log.tg
[2025-04-18 11:41:07] 2025-04-18 18:40:47,921 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-18 11:41:07] 2025-04-18 18:40:47,922 | INFO     | summary of transferred files:
[2025-04-18 11:41:07] 2025-04-18 18:40:47,922 | INFO     |  -- lfn=log.44075483._061324.job.log.tgz.1, status_code=0, status=transferred
[2025-04-18 11:41:07] 2025-04-18 18:40:47,922 | INFO     | stage-out finished correctly
[2025-04-18 11:41:07] 2025-04-18 18:40:48,534 | INFO     | monitor loop #394: job 0:6605944731 is in state 'finished'
[2025-04-18 11:41:07] 2025-04-18 18:40:48,534 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-18 11:41:07] 2025-04-18 18:40:50,802 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-18 11:41:07] 2025-04-18 18:40:51,037 | INFO     | monitor loop #395: job 0:6605944731 is in state 'finished'
[2025-04-18 11:41:07] 2025-04-18 18:40:51,037 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-18 11:41:07] 2025-04-18 18:40:52,460 | INFO     | job 6605944731 has state=finished
[2025-04-18 11:41:07] 2025-04-18 18:40:52,460 | INFO     | preparing for final server update for job 6605944731 in state='finished'
[2025-04-18 11:41:07] 2025-04-18 18:40:52,461 | INFO     | this job has now completed (state=finished)
[2025-04-18 11:41:07] 2025-04-18 18:40:52,461 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-18 11:41:07] 2025-04-18 18:40:52,461 | INFO     | log transfer has been attempted: DONE
[2025-04-18 11:41:07] 2025-04-18 18:40:52,461 | INFO     | job 6605944731 has finished - writing final server update
[2025-04-18 11:41:07] 2025-04-18 18:40:52,461 | INFO     | total number of processed events: 400 (read)
[2025-04-18 11:41:07] 2025-04-18 18:40:52,463 | INFO     | executing command: lscpu
[2025-04-18 11:41:07] 2025-04-18 18:40:52,498 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-18 11:41:07] 2025-04-18 18:40:53,540 | INFO     | monitor loop #396: job 0:6605944731 is in state 'finished'
[2025-04-18 11:41:07] 2025-04-18 18:40:53,540 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-18 11:41:07] 2025-04-18 18:40:55,311 | INFO     | CPU arch script returned: x86-64-v4
[2025-04-18 11:41:07] 2025-04-18 18:40:55,311 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6605944731/memory_monitor_summary.json (trf name=prmon)
[2025-04-18 11:41:07] 2025-04-18 18:40:55,311 | INFO     | extracted standard info from prmon json
[2025-04-18 11:41:07] 2025-04-18 18:40:55,311 | INFO     | extracted standard memory fields from prmon json
[2025-04-18 11:41:07] 2025-04-18 18:40:55,311 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-18 11:41:07] 2025-04-18 18:40:55,312 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-18 11:41:07] 2025-04-18 18:40:55,312 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-18 11:41:07] 2025-04-18 18:40:55,313 | INFO     | fitting pss+swap vs Time
[2025-04-18 11:41:07] 2025-04-18 18:40:55,313 | INFO     | sum of square deviations: 177273082.4096387
[2025-04-18 11:41:07] 2025-04-18 18:40:55,314 | INFO     | sum of deviations: 29109073506.71083
[2025-04-18 11:41:07] 2025-04-18 18:40:55,314 | INFO     | mean x: 1744999016.0843372
[2025-04-18 11:41:07] 2025-04-18 18:40:55,314 | INFO     | mean y: 2718301.4698795183
[2025-04-18 11:41:07] 2025-04-18 18:40:55,314 | INFO     | -- intersect: -286534323520.5953
[2025-04-18 11:41:07] 2025-04-18 18:40:55,314 | INFO     | intersect: -286534323520.5953
[2025-04-18 11:41:07] 2025-04-18 18:40:55,314 | INFO     | chi2: 2.64709101440478
[2025-04-18 11:41:07] 2025-04-18 18:40:55,315 | INFO     | -- intersect: -286534323520.5953
[2025-04-18 11:41:07] 2025-04-18 18:40:55,315 | INFO     | current memory leak: 164.20 B/s (using 83 data points, chi2=2.65)
[2025-04-18 11:41:07] 2025-04-18 18:40:55,315 | INFO     | ..............................
[2025-04-18 11:41:07] 2025-04-18 18:40:55,315 | INFO     | . Timing measurements:
[2025-04-18 11:41:07] 2025-04-18 18:40:55,315 | INFO     | . get job = 0 s
[2025-04-18 11:41:07] 2025-04-18 18:40:55,315 | INFO     | . initial setup = 3 s
[2025-04-18 11:41:07] 2025-04-18 18:40:55,315 | INFO     | . payload setup = 3 s
[2025-04-18 11:41:07] 2025-04-18 18:40:55,315 | INFO     | . stage-in = 0 s
[2025-04-18 11:41:07] 2025-04-18 18:40:55,315 | INFO     | . payload execution = 5436 s
[2025-04-18 11:41:07] 2025-04-18 18:40:55,315 | INFO     | . stage-out = 0 s
[2025-04-18 11:41:07] 2025-04-18 18:40:55,315 | INFO     | . log creation = 0 s
[2025-04-18 11:41:07] 2025-04-18 18:40:55,315 | INFO     | ..............................
[2025-04-18 11:41:07] 2025-04-18 18:40:55,642 | INFO     | 
[2025-04-18 11:41:07] 2025-04-18 18:40:55,642 | INFO     | job summary report
[2025-04-18 11:41:07] 2025-04-18 18:40:55,643 | INFO     | --------------------------------------------------
[2025-04-18 11:41:07] 2025-04-18 18:40:55,643 | INFO     | PanDA job id: 6605944731
[2025-04-18 11:41:07] 2025-04-18 18:40:55,643 | INFO     | task id: 44075483
[2025-04-18 11:41:07] 2025-04-18 18:40:55,643 | INFO     | errors: (none)
[2025-04-18 11:41:07] 2025-04-18 18:40:55,643 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-18 11:41:07] 2025-04-18 18:40:55,643 | INFO     | pilot state: finished 
[2025-04-18 11:41:07] 2025-04-18 18:40:55,643 | INFO     | transexitcode: 0
[2025-04-18 11:41:07] 2025-04-18 18:40:55,643 | INFO     | exeerrorcode: 0
[2025-04-18 11:41:07] 2025-04-18 18:40:55,643 | INFO     | exeerrordiag: 
[2025-04-18 11:41:07] 2025-04-18 18:40:55,643 | INFO     | exitcode: 0
[2025-04-18 11:41:07] 2025-04-18 18:40:55,643 | INFO     | exitmsg: OK
[2025-04-18 11:41:07] 2025-04-18 18:40:55,643 | INFO     | cpuconsumptiontime: 26973 s
[2025-04-18 11:41:07] 2025-04-18 18:40:55,643 | INFO     | nevents: 400
[2025-04-18 11:41:07] 2025-04-18 18:40:55,643 | INFO     | neventsw: 0
[2025-04-18 11:41:07] 2025-04-18 18:40:55,643 | INFO     | pid: 1952554
[2025-04-18 11:41:07] 2025-04-18 18:40:55,643 | INFO     | pgrp: 1952554
[2025-04-18 11:41:07] 2025-04-18 18:40:55,643 | INFO     | corecount: 12
[2025-04-18 11:41:07] 2025-04-18 18:40:55,643 | INFO     | event service: False
[2025-04-18 11:41:07] 2025-04-18 18:40:55,643 | INFO     | sizes: {0: 2426820, 3: 2427026, 11: 2427054, 5444: 2453694, 5446: 2462629, 5448: 2462685, 5453: 2462813}
[2025-04-18 11:41:07] 2025-04-18 18:40:55,643 | INFO     | --------------------------------------------------
[2025-04-18 11:41:07] 2025-04-18 18:40:55,643 | INFO     | 
[2025-04-18 11:41:07] 2025-04-18 18:40:55,644 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-04-18 11:41:07] 2025-04-18 18:40:55,657 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-18 11:41:07] 2025-04-18 18:40:55,657 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-18 11:41:07] 2025-04-18 18:40:55,657 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-18 11:41:07] 2025-04-18 18:40:55,657 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-18 11:41:07] 2025-04-18 18:40:55,657 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-18 11:41:07] 2025-04-18 18:40:55,657 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-18 11:41:07] 2025-04-18 18:40:55,657 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-18 11:41:07] 2025-04-18 18:40:55,657 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-18 11:41:07] 2025-04-18 18:40:55,657 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-18 11:41:07] 2025-04-18 18:40:55,657 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-18 11:41:07] 2025-04-18 18:40:55,657 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-18 11:41:07] 2025-04-18 18:40:55,657 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-18 11:41:07] 2025-04-18 18:40:55,657 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-18 11:41:07] 2025-04-18 18:40:55,657 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-18 11:41:07] 2025-04-18 18:40:55,658 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-18 11:41:07] 2025-04-18 18:40:55,658 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-18 11:41:07] 2025-04-18 18:40:55,658 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-18 11:41:07] 2025-04-18 18:40:55,658 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-18 11:41:07] 2025-04-18 18:40:55,658 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-18 11:41:07] 2025-04-18 18:40:55,658 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-18 11:41:07] 2025-04-18 18:40:55,658 | INFO     | job 6605944731 has completed (purged errors)
[2025-04-18 11:41:07] 2025-04-18 18:40:55,658 | INFO     | overall cleanup function is called
[2025-04-18 11:41:07] 2025-04-18 18:40:56,665 | INFO     | --- collectZombieJob: --- 10, [1952554]
[2025-04-18 11:41:07] 2025-04-18 18:40:56,665 | INFO     | zombie collector waiting for pid 1952554
[2025-04-18 11:41:07] 2025-04-18 18:40:56,665 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-18 11:41:07] 2025-04-18 18:40:56,665 | INFO     | collected zombie processes
[2025-04-18 11:41:07] 2025-04-18 18:40:56,665 | INFO     | will attempt to kill all subprocesses of pid=1952554
[2025-04-18 11:41:07] 2025-04-18 18:40:56,821 | INFO     | process IDs to be killed: [1952554] (in reverse order)
[2025-04-18 11:41:07] 2025-04-18 18:40:56,880 | WARNING  | found no corresponding commands to process id(s)
[2025-04-18 11:41:07] 2025-04-18 18:40:56,881 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-18 11:41:07] 2025-04-18 18:40:56,888 | INFO     | did not find any defunct processes belonging to 1952554
[2025-04-18 11:41:07] 2025-04-18 18:40:56,894 | INFO     | did not find any defunct processes belonging to 1952554
[2025-04-18 11:41:07] 2025-04-18 18:40:56,894 | INFO     | ready for new job
[2025-04-18 11:41:07] 2025-04-18 18:40:56,894 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-18 11:41:07] 2025-04-18 18:40:56,895 | INFO     | **************************************
[2025-04-18 11:41:07] 2025-04-18 18:40:56,895 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-18 11:41:07] 2025-04-18 18:40:56,895 | INFO     | **************************************
[2025-04-18 11:41:07] 2025-04-18 18:40:56,896 | INFO     | 
[2025-04-18 11:41:07] 2025-04-18 18:40:56,897 | INFO     | architecture information:
[2025-04-18 11:41:07] 2025-04-18 18:40:56,897 | INFO     | executing command: cat /etc/os-release
[2025-04-18 11:41:07] 2025-04-18 18:40:56,908 | INFO     | cat /etc/os-release:
[2025-04-18 11:41:07] NAME="CentOS Linux"
[2025-04-18 11:41:07] VERSION="7 (Core)"
[2025-04-18 11:41:07] ID="centos"
[2025-04-18 11:41:07] ID_LIKE="rhel fedora"
[2025-04-18 11:41:07] VERSION_ID="7"
[2025-04-18 11:41:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-18 11:41:07] ANSI_COLOR="0;31"
[2025-04-18 11:41:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-18 11:41:07] HOME_URL="https://www.centos.org/"
[2025-04-18 11:41:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-18 11:41:07] 
[2025-04-18 11:41:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-18 11:41:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-18 11:41:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-18 11:41:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-18 11:41:07] 
[2025-04-18 11:41:07] 2025-04-18 18:40:56,909 | INFO     | **************************************
[2025-04-18 11:41:07] 2025-04-18 18:40:57,412 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-04-18 11:41:07] 2025-04-18 18:40:57,422 | INFO     | sufficient remaining disk space (2211225534464 B)
[2025-04-18 11:41:07] 2025-04-18 18:40:57,422 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-18 11:41:07] 2025-04-18 18:40:57,422 | INFO     | current server update state: UPDATING_FINAL
[2025-04-18 11:41:07] 2025-04-18 18:40:57,422 | INFO     | update_server=False
[2025-04-18 11:41:07] 2025-04-18 18:40:57,422 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-18 11:41:07] 2025-04-18 18:40:57,422 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-18 11:41:07] 2025-04-18 18:40:57,423 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-18 11:41:07] 2025-04-18 18:40:57,423 | INFO     | aborting loop
[2025-04-18 11:41:07] 2025-04-18 18:40:57,517 | INFO     | all payload control threads have been joined
[2025-04-18 11:41:07] 2025-04-18 18:40:57,676 | INFO     | all data control threads have been joined
[2025-04-18 11:41:07] 2025-04-18 18:40:58,133 | INFO     | PID=1946089 has CPU usage=6.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-04-18 11:41:07] 2025-04-18 18:40:58,133 | INFO     | .. there are 21 such processes running
[2025-04-18 11:41:07] 2025-04-18 18:40:58,133 | INFO     | found 0 job(s) in 20 queues
[2025-04-18 11:41:07] 2025-04-18 18:40:58,133 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-18 11:41:07] 2025-04-18 18:40:58,133 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-18 11:41:07] 2025-04-18 18:40:58,427 | INFO     | [job] retrieve thread has finished
[2025-04-18 11:41:07] 2025-04-18 18:40:58,428 | INFO     | [job] job monitor thread has finished
[2025-04-18 11:41:07] 2025-04-18 18:40:58,497 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-18 11:41:07] 2025-04-18 18:40:58,523 | INFO     | [payload] control thread has finished
[2025-04-18 11:41:07] 2025-04-18 18:40:58,636 | INFO     | [payload] validate_post thread has finished
[2025-04-18 11:41:07] 2025-04-18 18:40:58,655 | INFO     | [job] create_data_payload thread has finished
[2025-04-18 11:41:07] 2025-04-18 18:40:58,681 | INFO     | [data] control thread has finished
[2025-04-18 11:41:07] 2025-04-18 18:40:58,700 | INFO     | all job control threads have been joined
[2025-04-18 11:41:07] 2025-04-18 18:40:58,795 | INFO     | [payload] failed_post thread has finished
[2025-04-18 11:41:07] 2025-04-18 18:40:58,919 | INFO     | [data] copytool_in thread has finished
[2025-04-18 11:41:07] 2025-04-18 18:40:59,118 | INFO     | [payload] execute_payloads thread has finished
[2025-04-18 11:41:07] 2025-04-18 18:40:59,158 | INFO     | [payload] validate_pre thread has finished
[2025-04-18 11:41:07] 2025-04-18 18:40:59,702 | INFO     | [job] validate thread has finished
[2025-04-18 11:41:07] 2025-04-18 18:40:59,703 | INFO     | [job] control thread has finished
[2025-04-18 11:41:07] 2025-04-18 18:40:59,854 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-18 11:41:07] 2025-04-18 18:41:00,380 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-18 11:41:07] 2025-04-18 18:41:00,502 | INFO     | [data] copytool_out thread has finished
[2025-04-18 11:41:07] 2025-04-18 18:41:01,385 | INFO     | [job] queue monitor thread has finished
[2025-04-18 11:41:07] 2025-04-18 18:41:01,433 | INFO     | [data] queue_monitor thread has finished
[2025-04-18 11:41:07] 2025-04-18 18:41:02,002 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140313413875520)>', '<ExcThread(monitor, started 140312739567360)>']
[2025-04-18 11:41:07] 2025-04-18 18:41:02,154 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-18 11:41:07] 2025-04-18 18:41:02,154 | INFO     | [monitor] control thread has ended
[2025-04-18 11:41:07] 2025-04-18 18:41:07,027 | INFO     | all workflow threads have been joined
[2025-04-18 11:41:07] 2025-04-18 18:41:07,028 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-18 11:41:07] 2025-04-18 18:41:07,028 | INFO     | traces error code: 0
[2025-04-18 11:41:07] 2025-04-18 18:41:07,028 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-18 11:41:07] 2025-04-18 18:41:07,127 [wrapper] ==== pilot stdout END ====
[2025-04-18 11:41:07] 2025-04-18 18:41:07,129 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-18 11:41:07] 2025-04-18 18:41:07,131 [wrapper] pilotpid: 1946089
[2025-04-18 11:41:07] 2025-04-18 18:41:07,133 [wrapper] Pilot exit status: 0
[2025-04-18 11:41:07] 2025-04-18 18:41:07,139 [wrapper] pandaids: 6605944731
[2025-04-18 11:41:07] 2025-04-18 18:41:07,178 [wrapper] cleanup supervisor_pilot 2083511 1946090
[2025-04-18 11:41:07] 2025-04-18 18:41:07,180 [wrapper] Test setup, not cleaning
[2025-04-18 11:41:07] 2025-04-18 18:41:07,182 [wrapper] apfmon messages muted
[2025-04-18 11:41:07] 2025-04-18 18:41:07,184 [wrapper] ==== wrapper stdout END ====
[2025-04-18 11:41:07] 2025-04-18 18:41:07,185 [wrapper] ==== wrapper stderr END ====
[2025-04-18 11:41:07]  *** Error codes and diagnostics ***
[2025-04-18 11:41:07]     "exeErrorCode": 0,
[2025-04-18 11:41:07]     "exeErrorDiag": "",
[2025-04-18 11:41:07]     "pilotErrorCode": 0,
[2025-04-18 11:41:07]     "pilotErrorDiag": "",
[2025-04-18 11:41:07]  *** Listing of results directory ***
[2025-04-18 11:41:07] total 413840
[2025-04-18 11:41:07] -rw-r--r--. 1 boinc boinc    495897 Apr 17 15:31 pilot3.tar.gz
[2025-04-18 11:41:07] -rw-r--r--. 1 boinc boinc      5111 Apr 17 15:42 queuedata.json
[2025-04-18 11:41:07] -rwx------. 1 boinc boinc     37140 Apr 17 15:42 runpilot2-wrapper.sh
[2025-04-18 11:41:07] -rw-r--r--. 1 boinc boinc       100 Apr 18 10:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-18 11:41:07] -rwxr-xr-x. 1 boinc boinc      7986 Apr 18 10:09 run_atlas
[2025-04-18 11:41:07] -rw-r--r--. 1 boinc boinc       105 Apr 18 10:09 job.xml
[2025-04-18 11:41:07] -rw-r--r--. 1 boinc boinc      6602 Apr 18 10:09 init_data.xml
[2025-04-18 11:41:07] -rw-r--r--. 2 boinc boinc 223897615 Apr 18 10:09 EVNT.44075481._002383.pool.root.1
[2025-04-18 11:41:07] -rw-r--r--. 2 boinc boinc     17569 Apr 18 10:09 start_atlas.sh
[2025-04-18 11:41:07] drwxrwx--x. 2 boinc boinc      4096 Apr 18 10:09 shared
[2025-04-18 11:41:07] -rw-r--r--. 2 boinc boinc    508888 Apr 18 10:09 input.tar.gz
[2025-04-18 11:41:07] -rw-r--r--. 1 boinc boinc         0 Apr 18 10:09 boinc_lockfile
[2025-04-18 11:41:07] -rw-r--r--. 1 boinc boinc      2578 Apr 18 10:09 pandaJob.out
[2025-04-18 11:41:07] -rw-------. 1 boinc boinc       424 Apr 18 10:09 setup.sh.local
[2025-04-18 11:41:07] -rw-------. 1 boinc boinc    990596 Apr 18 10:09 agis_schedconf.cvmfs.json
[2025-04-18 11:41:07] -rw-------. 1 boinc boinc   1618536 Apr 18 10:09 agis_ddmendpoints.agis.ALL.json
[2025-04-18 11:41:07] drwx------. 4 boinc boinc      4096 Apr 18 10:09 pilot3
[2025-04-18 11:41:07] -rw-------. 1 boinc boinc 194203508 Apr 18 11:40 HITS.44075483._061324.pool.root.1
[2025-04-18 11:41:07] -rw-------. 1 boinc boinc        95 Apr 18 11:40 pilot_heartbeat.json
[2025-04-18 11:41:07] -rw-------. 1 boinc boinc      1027 Apr 18 11:40 memory_monitor_summary.json
[2025-04-18 11:41:07] -rw-r--r--. 1 boinc boinc      8192 Apr 18 11:40 boinc_mmap_file
[2025-04-18 11:41:07] -rw-r--r--. 1 boinc boinc        27 Apr 18 11:40 wrapper_checkpoint.txt
[2025-04-18 11:41:07] -rw-r--r--. 1 boinc boinc       529 Apr 18 11:40 boinc_task_state.xml
[2025-04-18 11:41:07] -rw-------. 1 boinc boinc    381481 Apr 18 11:40 log.44075483._061324.job.log.tgz.1
[2025-04-18 11:41:07] -rw-------. 1 boinc boinc      7712 Apr 18 11:40 heartbeat.json
[2025-04-18 11:41:07] -rw-------. 1 boinc boinc      4747 Apr 18 11:41 pilotlog.txt
[2025-04-18 11:41:07] -rw-------. 1 boinc boinc    522511 Apr 18 11:41 log.44075483._061324.job.log.1
[2025-04-18 11:41:07] -rw-------. 1 boinc boinc       357 Apr 18 11:41 output.list
[2025-04-18 11:41:07] -rw-r--r--. 1 boinc boinc       620 Apr 18 11:41 runtime_log
[2025-04-18 11:41:07] -rw-------. 1 boinc boinc    921600 Apr 18 11:41 result.tar.gz
[2025-04-18 11:41:07] -rw-r--r--. 1 boinc boinc     11144 Apr 18 11:41 runtime_log.err
[2025-04-18 11:41:07] -rw-------. 1 boinc boinc       659 Apr 18 11:41 F4oLDmN7mP7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmWtdLDmHUbLdn.diag
[2025-04-18 11:41:07] -rw-r--r--. 1 boinc boinc     21610 Apr 18 11:41 stderr.txt
[2025-04-18 11:41:07] HITS file was successfully produced:
[2025-04-18 11:41:07] -rw-------. 1 boinc boinc 194203508 Apr 18 11:40 shared/HITS.pool.root.1
[2025-04-18 11:41:07]  *** Contents of shared directory: ***
[2025-04-18 11:41:07] total 409732
[2025-04-18 11:41:07] -rw-r--r--. 2 boinc boinc 223897615 Apr 18 10:09 ATLAS.root_0
[2025-04-18 11:41:07] -rw-r--r--. 2 boinc boinc     17569 Apr 18 10:09 start_atlas.sh
[2025-04-18 11:41:07] -rw-r--r--. 2 boinc boinc    508888 Apr 18 10:09 input.tar.gz
[2025-04-18 11:41:07] -rw-------. 1 boinc boinc 194203508 Apr 18 11:40 HITS.pool.root.1
[2025-04-18 11:41:07] -rw-------. 1 boinc boinc    921600 Apr 18 11:41 result.tar.gz
11:41:08 (1942502): run_atlas exited; CPU time 27054.662150
11:41:08 (1942502): called boinc_finish(0)

</stderr_txt>
]]>

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