Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
22:18:39 (36407): wrapper (7.7.26015): starting
22:18:39 (36407): wrapper: running run_atlas (--nthreads 10)
[2025-04-17 22:18:40] Arguments: --nthreads 10
[2025-04-17 22:18:40] Threads: 10
[2025-04-17 22:18:40] Checking for CVMFS
[2025-04-17 22:18:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-17 22:18:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-17 22:18:42] Running cvmfs_config stat atlas.cern.ch
[2025-04-17 22:18:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-17 22:18:43] 2.11.2.0 31676 40299 238920 144985 3 280 18382285 18432001 17688 130560 0 164490331 98.936 398355929 35683 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-17 22:18:43] CVMFS is ok
[2025-04-17 22:18:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-17 22:18:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-17 22:18:43] Further information can be found at the LHC@home message board.
[2025-04-17 22:18:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-17 22:18:43] Checking for apptainer binary...
[2025-04-17 22:18:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-17 22:18:43] Running /usr/bin/apptainer --version
[2025-04-17 22:18:44] apptainer version 1.3.2-1.el7
[2025-04-17 22:18:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-17 22:19:14] c-210-5.aglt2.org
[2025-04-17 22:19:14] apptainer works
[2025-04-17 22:19:14] Set ATHENA_PROC_NUMBER=10
[2025-04-17 22:19:14] Set ATHENA_CORE_NUMBER=10
[2025-04-17 22:19:14] Starting ATLAS job with PandaID=6605744096
[2025-04-17 22:19:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
02:00:05 (36407): BOINC client no longer exists - exiting
02:00:05 (36407): timer handler: client dead, exiting
02:10:56 (34516): wrapper (7.7.26015): starting
02:10:56 (34516): wrapper: running run_atlas (--nthreads 10)
[2025-04-18 02:10:56] Arguments: --nthreads 10
[2025-04-18 02:10:56] Threads: 10
[2025-04-18 02:10:56] This job has been restarted, cleaning up previous attempt
[2025-04-18 02:10:57] Checking for CVMFS
[2025-04-18 02:10:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-18 02:10:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-18 02:10:58] Running cvmfs_config stat atlas.cern.ch
[2025-04-18 02:10:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-18 02:10:59] 2.11.2.0 31676 40531 235760 144992 3 114 13518282 18432000 14464 130560 0 164995578 98.933 400094338 35699 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-18 02:10:59] CVMFS is ok
[2025-04-18 02:11:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-18 02:11:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-18 02:11:00] Further information can be found at the LHC@home message board.
[2025-04-18 02:11:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-18 02:11:00] Checking for apptainer binary...
[2025-04-18 02:11:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-18 02:11:00] Running /usr/bin/apptainer --version
[2025-04-18 02:11:00] apptainer version 1.3.2-1.el7
[2025-04-18 02:11:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-18 02:11:18] c-210-5.aglt2.org
[2025-04-18 02:11:18] apptainer works
[2025-04-18 02:11:19] Set ATHENA_PROC_NUMBER=10
[2025-04-18 02:11:19] Set ATHENA_CORE_NUMBER=10
[2025-04-18 02:11:19] Starting ATLAS job with PandaID=6605744096
[2025-04-18 02:11:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-19 06:20:53]  *** The last 200 lines of the pilot log: ***
[2025-04-19 06:20:53] 2025-04-19 10:20:27,447 | INFO     | mean y: 2538935.5048367595
[2025-04-19 06:20:53] 2025-04-19 10:20:27,448 | INFO     | -- intersect: -2851948359.4184766
[2025-04-19 06:20:53] 2025-04-19 10:20:27,448 | INFO     | intersect: -2851948359.4184766
[2025-04-19 06:20:53] 2025-04-19 10:20:27,456 | INFO     | chi2: 11.550955978385968
[2025-04-19 06:20:53] 2025-04-19 10:20:27,470 | INFO     | sum of square deviations: 1390413629285.9692
[2025-04-19 06:20:53] 2025-04-19 10:20:28,223 | INFO     | sum of deviations: 2644699859247.184
[2025-04-19 06:20:53] 2025-04-19 10:20:28,257 | INFO     | mean x: 1745007330.5130382
[2025-04-19 06:20:53] 2025-04-19 10:20:28,257 | INFO     | mean y: 2543131.852031534
[2025-04-19 06:20:53] 2025-04-19 10:20:28,257 | INFO     | -- intersect: -3316627900.5573144
[2025-04-19 06:20:53] 2025-04-19 10:20:28,257 | INFO     | intersect: -3316627900.5573144
[2025-04-19 06:20:53] 2025-04-19 10:20:28,287 | INFO     | chi2: 9.02430268459317
[2025-04-19 06:20:53] 2025-04-19 10:20:28,287 | INFO     | current chi2=9.02430268459317 (change=21.87397561310636 %)
[2025-04-19 06:20:53] 2025-04-19 10:20:28,287 | INFO     | right removable region: 1648
[2025-04-19 06:20:53] 2025-04-19 10:20:28,322 | INFO     | sum of square deviations: 1390412307533.914
[2025-04-19 06:20:53] 2025-04-19 10:20:29,097 | INFO     | sum of deviations: 1727586573845.2805
[2025-04-19 06:20:53] 2025-04-19 10:20:29,098 | INFO     | mean x: 1745007635.514251
[2025-04-19 06:20:53] 2025-04-19 10:20:29,098 | INFO     | mean y: 2545757.349909036
[2025-04-19 06:20:53] 2025-04-19 10:20:29,098 | INFO     | -- intersect: -2165625328.332449
[2025-04-19 06:20:53] 2025-04-19 10:20:29,098 | INFO     | intersect: -2165625328.332449
[2025-04-19 06:20:53] 2025-04-19 10:20:29,123 | INFO     | chi2: 7.501019048992656
[2025-04-19 06:20:53] 2025-04-19 10:20:29,149 | INFO     | current chi2=7.501019048992656 (change=35.06148700567739 %)
[2025-04-19 06:20:53] 2025-04-19 10:20:29,168 | INFO     | sum of square deviations: 1377802174632.4153
[2025-04-19 06:20:53] 2025-04-19 10:20:29,737 | INFO     | sum of deviations: 1326793647877.4753
[2025-04-19 06:20:53] 2025-04-19 10:20:29,737 | INFO     | mean x: 1745007788.0188565
[2025-04-19 06:20:53] 2025-04-19 10:20:29,738 | INFO     | mean y: 2550604.01703163
[2025-04-19 06:20:53] 2025-04-19 10:20:29,738 | INFO     | -- intersect: -1677854095.052219
[2025-04-19 06:20:53] 2025-04-19 10:20:29,738 | INFO     | intersect: -1677854095.052219
[2025-04-19 06:20:53] 2025-04-19 10:20:29,742 | INFO     | chi2: 5.550214949963104
[2025-04-19 06:20:53] 2025-04-19 10:20:29,742 | INFO     | current chi2=5.550214949963104 (change=26.007187640611757 %)
[2025-04-19 06:20:53] 2025-04-19 10:20:29,745 | INFO     | sum of square deviations: 1365268508280.8455
[2025-04-19 06:20:53] 2025-04-19 10:20:29,850 | INFO     | sum of deviations: 967814090945.2864
[2025-04-19 06:20:53] 2025-04-19 10:20:29,851 | INFO     | mean x: 1745007940.52349
[2025-04-19 06:20:53] 2025-04-19 10:20:29,851 | INFO     | mean y: 2554971.914582062
[2025-04-19 06:20:53] 2025-04-19 10:20:29,851 | INFO     | -- intersect: -1234449517.2438543
[2025-04-19 06:20:53] 2025-04-19 10:20:29,851 | INFO     | intersect: -1234449517.2438543
[2025-04-19 06:20:53] 2025-04-19 10:20:29,853 | INFO     | chi2: 4.003682186807562
[2025-04-19 06:20:53] 2025-04-19 10:20:29,854 | INFO     | current chi2=4.003682186807562 (change=27.864376012424945 %)
[2025-04-19 06:20:53] 2025-04-19 10:20:29,856 | INFO     | sum of square deviations: 1352811075916.7056
[2025-04-19 06:20:53] 2025-04-19 10:20:29,990 | INFO     | monitor loop #4184: job 0:6605744096 is in state 'finished'
[2025-04-19 06:20:53] 2025-04-19 10:20:29,990 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 06:20:53] 2025-04-19 10:20:30,030 | INFO     | sum of deviations: 710988058162.2285
[2025-04-19 06:20:53] 2025-04-19 10:20:30,030 | INFO     | mean x: 1745008093.0281518
[2025-04-19 06:20:53] 2025-04-19 10:20:30,030 | INFO     | mean y: 2558114.5385556915
[2025-04-19 06:20:53] 2025-04-19 10:20:30,030 | INFO     | -- intersect: -914554361.5688246
[2025-04-19 06:20:53] 2025-04-19 10:20:30,031 | INFO     | intersect: -914554361.5688246
[2025-04-19 06:20:53] 2025-04-19 10:20:30,034 | INFO     | chi2: 3.160145770848195
[2025-04-19 06:20:53] 2025-04-19 10:20:30,034 | INFO     | current chi2=3.160145770848195 (change=21.069015386358178 %)
[2025-04-19 06:20:53] 2025-04-19 10:20:30,034 | INFO     | left removable region: 40
[2025-04-19 06:20:53] 2025-04-19 10:20:30,037 | INFO     | sum of square deviations: 1289254650700.7776
[2025-04-19 06:20:53] 2025-04-19 10:20:30,139 | INFO     | sum of deviations: 701350742405.3287
[2025-04-19 06:20:53] 2025-04-19 10:20:30,139 | INFO     | mean x: 1745008520.0447762
[2025-04-19 06:20:53] 2025-04-19 10:20:30,139 | INFO     | mean y: 2566889.2176616914
[2025-04-19 06:20:53] 2025-04-19 10:20:30,139 | INFO     | -- intersect: -946712619.1958189
[2025-04-19 06:20:53] 2025-04-19 10:20:30,139 | INFO     | intersect: -946712619.1958189
[2025-04-19 06:20:53] 2025-04-19 10:20:30,142 | INFO     | chi2: 0.2115013524343864
[2025-04-19 06:20:53] 2025-04-19 10:20:30,143 | INFO     | -- intersect: -946712619.1958189
[2025-04-19 06:20:53] 2025-04-19 10:20:30,143 | INFO     | current memory leak: 0.54 B/s (using 1608 data points, chi2=0.21)
[2025-04-19 06:20:53] 2025-04-19 10:20:30,146 | INFO     | ..............................
[2025-04-19 06:20:53] 2025-04-19 10:20:30,146 | INFO     | . Timing measurements:
[2025-04-19 06:20:53] 2025-04-19 10:20:30,146 | INFO     | . get job = 0 s
[2025-04-19 06:20:53] 2025-04-19 10:20:30,146 | INFO     | . initial setup = 9 s
[2025-04-19 06:20:53] 2025-04-19 10:20:30,146 | INFO     | . payload setup = 73 s
[2025-04-19 06:20:53] 2025-04-19 10:20:30,146 | INFO     | . stage-in = 0 s
[2025-04-19 06:20:53] 2025-04-19 10:20:30,147 | INFO     | . payload execution = 100952 s
[2025-04-19 06:20:53] 2025-04-19 10:20:30,147 | INFO     | . stage-out = 14 s
[2025-04-19 06:20:53] 2025-04-19 10:20:30,147 | INFO     | . log creation = 1 s
[2025-04-19 06:20:53] 2025-04-19 10:20:30,147 | INFO     | ..............................
[2025-04-19 06:20:53] 2025-04-19 10:20:30,734 | INFO     | 
[2025-04-19 06:20:53] 2025-04-19 10:20:30,735 | INFO     | job summary report
[2025-04-19 06:20:53] 2025-04-19 10:20:30,739 | INFO     | --------------------------------------------------
[2025-04-19 06:20:53] 2025-04-19 10:20:30,739 | INFO     | PanDA job id: 6605744096
[2025-04-19 06:20:53] 2025-04-19 10:20:30,739 | INFO     | task id: 44075483
[2025-04-19 06:20:53] 2025-04-19 10:20:30,739 | INFO     | errors: (none)
[2025-04-19 06:20:53] 2025-04-19 10:20:30,739 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-19 06:20:53] 2025-04-19 10:20:30,740 | INFO     | pilot state: finished 
[2025-04-19 06:20:53] 2025-04-19 10:20:30,740 | INFO     | transexitcode: 0
[2025-04-19 06:20:53] 2025-04-19 10:20:30,740 | INFO     | exeerrorcode: 0
[2025-04-19 06:20:53] 2025-04-19 10:20:30,740 | INFO     | exeerrordiag: 
[2025-04-19 06:20:53] 2025-04-19 10:20:30,740 | INFO     | exitcode: 0
[2025-04-19 06:20:53] 2025-04-19 10:20:30,740 | INFO     | exitmsg: OK
[2025-04-19 06:20:53] 2025-04-19 10:20:30,740 | INFO     | cpuconsumptiontime: 63013 s
[2025-04-19 06:20:53] 2025-04-19 10:20:30,740 | INFO     | nevents: 400
[2025-04-19 06:20:53] 2025-04-19 10:20:30,740 | INFO     | neventsw: 0
[2025-04-19 06:20:53] 2025-04-19 10:20:30,740 | INFO     | pid: 16970
[2025-04-19 06:20:53] 2025-04-19 10:20:30,741 | INFO     | pgrp: 16970
[2025-04-19 06:20:53] 2025-04-19 10:20:30,741 | INFO     | corecount: 10
[2025-04-19 06:20:53] 2025-04-19 10:20:30,741 | INFO     | event service: False
[2025-04-19 06:20:53] 2025-04-19 10:20:30,747 | INFO     | sizes: {0: 2425990, 1: 2426675, 2: 2426874, 13: 2426874, 24: 2426930, 34: 2426958, 46: 2427114, 50: 2427348, 57: 2427376, 101034: 2490066, 101037: 2490065, 101052:
[2025-04-19 06:20:53] 2025-04-19 10:20:30,747 | INFO     | --------------------------------------------------
[2025-04-19 06:20:53] 2025-04-19 10:20:30,747 | INFO     | 
[2025-04-19 06:20:53] 2025-04-19 10:20:30,747 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-19 06:20:53] 2025-04-19 10:20:31,227 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-19 06:20:53] 2025-04-19 10:20:31,228 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-19 06:20:53] 2025-04-19 10:20:31,228 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-19 06:20:53] 2025-04-19 10:20:31,228 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-19 06:20:53] 2025-04-19 10:20:31,228 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-19 06:20:53] 2025-04-19 10:20:31,228 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-19 06:20:53] 2025-04-19 10:20:31,228 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-19 06:20:53] 2025-04-19 10:20:31,228 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-19 06:20:53] 2025-04-19 10:20:31,228 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-19 06:20:53] 2025-04-19 10:20:31,229 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-19 06:20:53] 2025-04-19 10:20:31,243 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-19 06:20:53] 2025-04-19 10:20:31,244 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-19 06:20:53] 2025-04-19 10:20:31,244 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-19 06:20:53] 2025-04-19 10:20:31,244 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-19 06:20:53] 2025-04-19 10:20:31,244 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-19 06:20:53] 2025-04-19 10:20:31,244 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-19 06:20:53] 2025-04-19 10:20:31,244 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-19 06:20:53] 2025-04-19 10:20:31,244 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-19 06:20:53] 2025-04-19 10:20:31,244 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-19 06:20:53] 2025-04-19 10:20:31,244 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-19 06:20:53] 2025-04-19 10:20:31,245 | INFO     | job 6605744096 has completed (purged errors)
[2025-04-19 06:20:53] 2025-04-19 10:20:31,245 | INFO     | overall cleanup function is called
[2025-04-19 06:20:53] 2025-04-19 10:20:32,291 | INFO     | --- collectZombieJob: --- 10, [16970]
[2025-04-19 06:20:53] 2025-04-19 10:20:32,291 | INFO     | zombie collector waiting for pid 16970
[2025-04-19 06:20:53] 2025-04-19 10:20:32,291 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-19 06:20:53] 2025-04-19 10:20:32,291 | INFO     | collected zombie processes
[2025-04-19 06:20:53] 2025-04-19 10:20:32,291 | INFO     | will attempt to kill all subprocesses of pid=16970
[2025-04-19 06:20:53] 2025-04-19 10:20:37,028 | INFO     | process IDs to be killed: [16970] (in reverse order)
[2025-04-19 06:20:53] 2025-04-19 10:20:38,022 | WARNING  | found no corresponding commands to process id(s)
[2025-04-19 06:20:53] 2025-04-19 10:20:38,031 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-19 06:20:53] 2025-04-19 10:20:38,047 | INFO     | did not find any defunct processes belonging to 16970
[2025-04-19 06:20:53] 2025-04-19 10:20:38,060 | INFO     | did not find any defunct processes belonging to 16970
[2025-04-19 06:20:53] 2025-04-19 10:20:38,060 | INFO     | ready for new job
[2025-04-19 06:20:53] 2025-04-19 10:20:38,061 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-19 06:20:53] 2025-04-19 10:20:38,066 | INFO     | **************************************
[2025-04-19 06:20:53] 2025-04-19 10:20:38,067 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-19 06:20:53] 2025-04-19 10:20:38,067 | INFO     | **************************************
[2025-04-19 06:20:53] 2025-04-19 10:20:38,067 | INFO     | 
[2025-04-19 06:20:53] 2025-04-19 10:20:38,069 | INFO     | architecture information:
[2025-04-19 06:20:53] 2025-04-19 10:20:38,094 | INFO     | executing command: cat /etc/os-release
[2025-04-19 06:20:53] 2025-04-19 10:20:38,306 | INFO     | cat /etc/os-release:
[2025-04-19 06:20:53] NAME="CentOS Linux"
[2025-04-19 06:20:53] VERSION="7 (Core)"
[2025-04-19 06:20:53] ID="centos"
[2025-04-19 06:20:53] ID_LIKE="rhel fedora"
[2025-04-19 06:20:53] VERSION_ID="7"
[2025-04-19 06:20:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-19 06:20:53] ANSI_COLOR="0;31"
[2025-04-19 06:20:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-19 06:20:53] HOME_URL="https://www.centos.org/"
[2025-04-19 06:20:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-19 06:20:53] 
[2025-04-19 06:20:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-19 06:20:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-19 06:20:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-19 06:20:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-19 06:20:53] 
[2025-04-19 06:20:53] 2025-04-19 10:20:38,307 | INFO     | **************************************
[2025-04-19 06:20:53] 2025-04-19 10:20:38,810 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-19 06:20:53] 2025-04-19 10:20:38,983 | INFO     | sufficient remaining disk space (57143197696 B)
[2025-04-19 06:20:53] 2025-04-19 10:20:38,983 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-19 06:20:53] 2025-04-19 10:20:38,983 | INFO     | current server update state: UPDATING_FINAL
[2025-04-19 06:20:53] 2025-04-19 10:20:38,984 | INFO     | update_server=False
[2025-04-19 06:20:53] 2025-04-19 10:20:38,984 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-19 06:20:53] 2025-04-19 10:20:38,986 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-19 06:20:53] 2025-04-19 10:20:38,994 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-19 06:20:53] 2025-04-19 10:20:38,999 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-19 06:20:53] 2025-04-19 10:20:38,999 | INFO     | aborting loop
[2025-04-19 06:20:53] 2025-04-19 10:20:39,008 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-19 06:20:53] 2025-04-19 10:20:39,009 | INFO     | found 0 job(s) in 20 queues
[2025-04-19 06:20:53] 2025-04-19 10:20:39,009 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-19 06:20:53] 2025-04-19 10:20:39,009 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-19 06:20:53] 2025-04-19 10:20:39,548 | INFO     | all job control threads have been joined
[2025-04-19 06:20:53] 2025-04-19 10:20:39,704 | INFO     | all data control threads have been joined
[2025-04-19 06:20:53] 2025-04-19 10:20:39,804 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-19 06:20:53] 2025-04-19 10:20:39,990 | INFO     | [job] retrieve thread has finished
[2025-04-19 06:20:53] 2025-04-19 10:20:40,016 | INFO     | [job] job monitor thread has finished
[2025-04-19 06:20:53] 2025-04-19 10:20:40,455 | INFO     | all payload control threads have been joined
[2025-04-19 06:20:53] 2025-04-19 10:20:40,578 | INFO     | [job] control thread has finished
[2025-04-19 06:20:53] 2025-04-19 10:20:40,711 | INFO     | [data] control thread has finished
[2025-04-19 06:20:53] 2025-04-19 10:20:40,802 | INFO     | [payload] execute_payloads thread has finished
[2025-04-19 06:20:53] 2025-04-19 10:20:40,811 | INFO     | [job] queue monitor thread has finished
[2025-04-19 06:20:53] 2025-04-19 10:20:41,007 | INFO     | [data] copytool_out thread has finished
[2025-04-19 06:20:53] 2025-04-19 10:20:41,039 | INFO     | [payload] validate_pre thread has finished
[2025-04-19 06:20:53] 2025-04-19 10:20:41,048 | INFO     | [job] validate thread has finished
[2025-04-19 06:20:53] 2025-04-19 10:20:41,059 | INFO     | [data] copytool_in thread has finished
[2025-04-19 06:20:53] 2025-04-19 10:20:41,162 | INFO     | [job] create_data_payload thread has finished
[2025-04-19 06:20:53] 2025-04-19 10:20:41,172 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-19 06:20:53] 2025-04-19 10:20:41,289 | INFO     | [payload] failed_post thread has finished
[2025-04-19 06:20:53] 2025-04-19 10:20:41,345 | INFO     | [payload] validate_post thread has finished
[2025-04-19 06:20:53] 2025-04-19 10:20:41,460 | INFO     | [payload] control thread has finished
[2025-04-19 06:20:53] 2025-04-19 10:20:42,996 | INFO     | [data] queue_monitor thread has finished
[2025-04-19 06:20:53] 2025-04-19 10:20:44,007 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140471129294656)>', '<ExcThread(monitor, started 140470822872832)>']
[2025-04-19 06:20:53] 2025-04-19 10:20:44,049 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-19 06:20:53] 2025-04-19 10:20:44,049 | INFO     | [monitor] control thread has ended
[2025-04-19 06:20:53] 2025-04-19 10:20:49,033 | INFO     | all workflow threads have been joined
[2025-04-19 06:20:53] 2025-04-19 10:20:49,033 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-19 06:20:53] 2025-04-19 10:20:49,034 | INFO     | traces error code: 0
[2025-04-19 06:20:53] 2025-04-19 10:20:49,034 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-19 06:20:53] 2025-04-19 10:20:50,246 [wrapper] ==== pilot stdout END ====
[2025-04-19 06:20:53] 2025-04-19 10:20:50,290 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-19 06:20:53] 2025-04-19 10:20:50,335 [wrapper] pilotpid: 23776
[2025-04-19 06:20:53] 2025-04-19 10:20:50,376 [wrapper] Pilot exit status: 0
[2025-04-19 06:20:53] 2025-04-19 10:20:50,566 [wrapper] pandaids: 6605744096 6605744096
[2025-04-19 06:20:53] 2025-04-19 10:20:51,249 [wrapper] cleanup supervisor_pilot 30804 23777
[2025-04-19 06:20:53] 2025-04-19 10:20:51,294 [wrapper] Test setup, not cleaning
[2025-04-19 06:20:53] 2025-04-19 10:20:51,339 [wrapper] apfmon messages muted
[2025-04-19 06:20:53] 2025-04-19 10:20:51,379 [wrapper] ==== wrapper stdout END ====
[2025-04-19 06:20:53] 2025-04-19 10:20:51,417 [wrapper] ==== wrapper stderr END ====
[2025-04-19 06:20:53]  *** Error codes and diagnostics ***
[2025-04-19 06:20:53]     "exeErrorCode": 0,
[2025-04-19 06:20:53]     "exeErrorDiag": "",
[2025-04-19 06:20:53]     "pilotErrorCode": 0,
[2025-04-19 06:20:53]     "pilotErrorDiag": "",
[2025-04-19 06:20:53]  *** Listing of results directory ***
[2025-04-19 06:20:53] total 649392
[2025-04-19 06:20:53] drwx------ 4 boincer umatlas      4096 Apr  3 04:00 pilot3
[2025-04-19 06:20:53] -rw-r--r-- 1 boincer umatlas    495897 Apr 17 12:56 pilot3.tar.gz
[2025-04-19 06:20:53] -rw-r--r-- 1 boincer umatlas      5111 Apr 17 13:19 queuedata.json
[2025-04-19 06:20:53] -rwx------ 1 boincer umatlas     37140 Apr 17 13:20 runpilot2-wrapper.sh
[2025-04-19 06:20:53] -rw-r--r-- 1 boincer umatlas       100 Apr 17 22:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-19 06:20:53] -rwxr-xr-x 1 boincer umatlas      7986 Apr 17 22:18 run_atlas
[2025-04-19 06:20:53] -rw-r--r-- 1 boincer umatlas       105 Apr 17 22:18 job.xml
[2025-04-19 06:20:53] -rw-r--r-- 3 boincer umatlas 225501733 Apr 17 22:18 EVNT.44075481._002275.pool.root.1
[2025-04-19 06:20:53] -rw-r--r-- 3 boincer umatlas 225501733 Apr 17 22:18 ATLAS.root_0
[2025-04-19 06:20:53] -rw-r--r-- 2 boincer umatlas     17569 Apr 17 22:18 start_atlas.sh
[2025-04-19 06:20:53] drwxrwx--x 2 boincer umatlas      4096 Apr 17 22:18 shared
[2025-04-19 06:20:53] -rw-r--r-- 2 boincer umatlas    508891 Apr 17 22:18 input.tar.gz
[2025-04-19 06:20:53] -rw-r--r-- 1 boincer umatlas         0 Apr 17 22:18 boinc_lockfile
[2025-04-19 06:20:53] -rw-r--r-- 1 boincer umatlas      2576 Apr 18 02:11 pandaJob.out
[2025-04-19 06:20:53] -rw------- 1 boincer umatlas       467 Apr 18 02:11 setup.sh.local
[2025-04-19 06:20:53] -rw------- 1 boincer umatlas    990242 Apr 18 02:13 agis_schedconf.cvmfs.json
[2025-04-19 06:20:53] -rw------- 1 boincer umatlas 195651090 Apr 19 06:15 HITS.44075483._058502.pool.root.1
[2025-04-19 06:20:53] -rw-r--r-- 1 boincer umatlas       532 Apr 19 06:15 boinc_task_state.xml
[2025-04-19 06:20:53] -rw------- 1 boincer umatlas      1059 Apr 19 06:18 memory_monitor_summary.json
[2025-04-19 06:20:53] -rw------- 1 boincer umatlas   1618536 Apr 19 06:19 agis_ddmendpoints.agis.ALL.json
[2025-04-19 06:20:53] -rw------- 1 boincer umatlas   1018812 Apr 19 06:19 log.44075483._058502.job.log.tgz.1
[2025-04-19 06:20:53] -rw-r--r-- 1 boincer umatlas      6230 Apr 19 06:20 init_data.xml
[2025-04-19 06:20:53] -rw------- 1 boincer umatlas        96 Apr 19 06:20 pilot_heartbeat.json
[2025-04-19 06:20:53] -rw------- 1 boincer umatlas      7759 Apr 19 06:20 heartbeat.json
[2025-04-19 06:20:53] -rw------- 1 boincer umatlas      4476 Apr 19 06:20 pilotlog.txt
[2025-04-19 06:20:53] -rw-r--r-- 1 boincer umatlas      8192 Apr 19 06:20 boinc_mmap_file
[2025-04-19 06:20:53] -rw-r--r-- 1 boincer umatlas        29 Apr 19 06:20 wrapper_checkpoint.txt
[2025-04-19 06:20:53] -rw------- 1 boincer umatlas   6207206 Apr 19 06:20 log.44075483._058502.job.log.1
[2025-04-19 06:20:53] -rw------- 1 boincer umatlas       357 Apr 19 06:20 output.list
[2025-04-19 06:20:53] -rw-r--r-- 1 boincer umatlas       620 Apr 19 06:20 runtime_log
[2025-04-19 06:20:53] -rw------- 1 boincer umatlas   7249920 Apr 19 06:20 result.tar.gz
[2025-04-19 06:20:53] -rw-r--r-- 1 boincer umatlas     11502 Apr 19 06:20 runtime_log.err
[2025-04-19 06:20:53] -rw------- 1 boincer umatlas       791 Apr 19 06:20 1CDODmP5hP7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmVOdLDmqPazRo.diag
[2025-04-19 06:20:53] -rw-r--r-- 1 boincer umatlas     23221 Apr 19 06:20 stderr.txt
[2025-04-19 06:20:54] HITS file was successfully produced:
[2025-04-19 06:20:54] -rw------- 1 boincer umatlas 195651090 Apr 19 06:15 shared/HITS.pool.root.1
[2025-04-19 06:20:54]  *** Contents of shared directory: ***
[2025-04-19 06:20:54] total 418892
[2025-04-19 06:20:54] -rw-r--r-- 3 boincer umatlas 225501733 Apr 17 22:18 ATLAS.root_0
[2025-04-19 06:20:54] -rw-r--r-- 2 boincer umatlas     17569 Apr 17 22:18 start_atlas.sh
[2025-04-19 06:20:54] -rw-r--r-- 2 boincer umatlas    508891 Apr 17 22:18 input.tar.gz
[2025-04-19 06:20:54] -rw------- 1 boincer umatlas 195651090 Apr 19 06:15 HITS.pool.root.1
[2025-04-19 06:20:54] -rw------- 1 boincer umatlas   7249920 Apr 19 06:20 result.tar.gz
06:20:56 (34516): run_atlas exited; CPU time 66607.741188
06:20:56 (34516): called boinc_finish(0)

</stderr_txt>
]]>

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