Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
20:58:43 (39504): wrapper (7.7.26015): starting
20:58:43 (39504): wrapper: running run_atlas (--nthreads 10)
[2025-04-17 20:58:43] Arguments: --nthreads 10
[2025-04-17 20:58:43] Threads: 10
[2025-04-17 20:58:43] Checking for CVMFS
[2025-04-17 20:58:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-17 20:58:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-17 20:58:44] Running cvmfs_config stat atlas.cern.ch
[2025-04-17 20:58:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-17 20:58:45] 2.11.2.0 20863 26118 232264 144983 1 462 13443393 18432001 16801 130560 0 123008602 98.965 288890659 36540 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-17 20:58:45] CVMFS is ok
[2025-04-17 20:58:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-17 20:58:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-17 20:58:45] Further information can be found at the LHC@home message board.
[2025-04-17 20:58:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-17 20:58:45] Checking for apptainer binary...
[2025-04-17 20:58:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-17 20:58:45] Running /usr/bin/apptainer --version
[2025-04-17 20:58:45] apptainer version 1.3.2-1.el7
[2025-04-17 20:58:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-17 20:58:57] c-210-1.aglt2.org
[2025-04-17 20:58:57] apptainer works
[2025-04-17 20:58:57] Set ATHENA_PROC_NUMBER=10
[2025-04-17 20:58:57] Set ATHENA_CORE_NUMBER=10
[2025-04-17 20:58:57] Starting ATLAS job with PandaID=6605315211
[2025-04-17 20:58:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
05:00:05 (39504): BOINC client no longer exists - exiting
05:00:05 (39504): timer handler: client dead, exiting
05:14:03 (8389): wrapper (7.7.26015): starting
05:14:03 (8389): wrapper: running run_atlas (--nthreads 10)
[2025-04-18 05:14:03] Arguments: --nthreads 10
[2025-04-18 05:14:03] Threads: 10
[2025-04-18 05:14:03] This job has been restarted, cleaning up previous attempt
[2025-04-18 05:14:03] Checking for CVMFS
[2025-04-18 05:14:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-18 05:14:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-18 05:14:06] Running cvmfs_config stat atlas.cern.ch
[2025-04-18 05:14:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-18 05:14:07] 2.11.2.0 20863 26613 221852 144996 2 62 17677090 18432001 12090 130560 0 124505262 98.960 293620711 36525 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-18 05:14:07] CVMFS is ok
[2025-04-18 05:14:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-18 05:14:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-18 05:14:07] Further information can be found at the LHC@home message board.
[2025-04-18 05:14:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-18 05:14:07] Checking for apptainer binary...
[2025-04-18 05:14:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-18 05:14:07] Running /usr/bin/apptainer --version
[2025-04-18 05:14:07] apptainer version 1.3.2-1.el7
[2025-04-18 05:14:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-18 05:14:28] c-210-1.aglt2.org
[2025-04-18 05:14:28] apptainer works
[2025-04-18 05:14:28] Set ATHENA_PROC_NUMBER=10
[2025-04-18 05:14:28] Set ATHENA_CORE_NUMBER=10
[2025-04-18 05:14:28] Starting ATLAS job with PandaID=6605315211
[2025-04-18 05:14:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-19 06:25:44]  *** The last 200 lines of the pilot log: ***
[2025-04-19 06:25:44] 2025-04-19 10:25:10,317 | INFO     | chi2: 9.281054375038025
[2025-04-19 06:25:44] 2025-04-19 10:25:10,318 | INFO     | current chi2=9.281054375038025 (change=32.37718626047137 %)
[2025-04-19 06:25:44] 2025-04-19 10:25:10,344 | INFO     | sum of square deviations: 978985695612.1217
[2025-04-19 06:25:44] 2025-04-19 10:25:11,088 | INFO     | sum of deviations: 1631627529949.3186
[2025-04-19 06:25:44] 2025-04-19 10:25:11,089 | INFO     | mean x: 1745013384.576687
[2025-04-19 06:25:44] 2025-04-19 10:25:11,089 | INFO     | mean y: 2552833.699386503
[2025-04-19 06:25:44] 2025-04-19 10:25:11,115 | INFO     | -- intersect: -2905775542.4625444
[2025-04-19 06:25:44] 2025-04-19 10:25:11,116 | INFO     | intersect: -2905775542.4625444
[2025-04-19 06:25:44] 2025-04-19 10:25:11,158 | INFO     | chi2: 6.5383583639491745
[2025-04-19 06:25:44] 2025-04-19 10:25:11,159 | INFO     | current chi2=6.5383583639491745 (change=29.551556323875257 %)
[2025-04-19 06:25:44] 2025-04-19 10:25:11,187 | INFO     | sum of square deviations: 969009165882.1512
[2025-04-19 06:25:44] 2025-04-19 10:25:12,008 | INFO     | sum of deviations: 1281702622918.3447
[2025-04-19 06:25:44] 2025-04-19 10:25:12,009 | INFO     | mean x: 1745013537.0820794
[2025-04-19 06:25:44] 2025-04-19 10:25:12,009 | INFO     | mean y: 2558182.3221614226
[2025-04-19 06:25:44] 2025-04-19 10:25:12,009 | INFO     | -- intersect: -2305560776.975824
[2025-04-19 06:25:44] 2025-04-19 10:25:12,009 | INFO     | intersect: -2305560776.975824
[2025-04-19 06:25:44] 2025-04-19 10:25:12,051 | INFO     | chi2: 4.6729907360284
[2025-04-19 06:25:44] 2025-04-19 10:25:12,075 | INFO     | current chi2=4.6729907360284 (change=28.529602143038396 %)
[2025-04-19 06:25:44] 2025-04-19 10:25:12,103 | INFO     | sum of square deviations: 959100815917.4369
[2025-04-19 06:25:44] 2025-04-19 10:25:12,565 | INFO     | monitor loop #3761: job 0:6605315211 is in state 'finished'
[2025-04-19 06:25:44] 2025-04-19 10:25:12,566 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 06:25:44] 2025-04-19 10:25:12,815 | INFO     | sum of deviations: 960857873857.6804
[2025-04-19 06:25:44] 2025-04-19 10:25:12,819 | INFO     | mean x: 1745013689.5861359
[2025-04-19 06:25:44] 2025-04-19 10:25:12,823 | INFO     | mean y: 2563120.568291009
[2025-04-19 06:25:44] 2025-04-19 10:25:12,823 | INFO     | -- intersect: -1745647407.2524035
[2025-04-19 06:25:44] 2025-04-19 10:25:12,823 | INFO     | intersect: -1745647407.2524035
[2025-04-19 06:25:44] 2025-04-19 10:25:12,844 | INFO     | chi2: 3.1212877914799346
[2025-04-19 06:25:44] 2025-04-19 10:25:12,844 | INFO     | current chi2=3.1212877914799346 (change=33.205778316335085 %)
[2025-04-19 06:25:44] 2025-04-19 10:25:12,861 | INFO     | sum of square deviations: 949260234421.1812
[2025-04-19 06:25:44] 2025-04-19 10:25:13,214 | INFO     | sum of deviations: 721742019626.3264
[2025-04-19 06:25:44] 2025-04-19 10:25:13,214 | INFO     | mean x: 1745013842.0902205
[2025-04-19 06:25:44] 2025-04-19 10:25:13,214 | INFO     | mean y: 2566824.3257575757
[2025-04-19 06:25:44] 2025-04-19 10:25:13,214 | INFO     | -- intersect: -1324202979.1455219
[2025-04-19 06:25:44] 2025-04-19 10:25:13,215 | INFO     | intersect: -1324202979.1455219
[2025-04-19 06:25:44] 2025-04-19 10:25:13,220 | INFO     | chi2: 2.2025573438356054
[2025-04-19 06:25:44] 2025-04-19 10:25:13,220 | INFO     | current chi2=2.2025573438356054 (change=29.434339574586943 %)
[2025-04-19 06:25:44] 2025-04-19 10:25:13,223 | INFO     | sum of square deviations: 939487100866.6903
[2025-04-19 06:25:44] 2025-04-19 10:25:13,461 | INFO     | sum of deviations: 619703575158.8247
[2025-04-19 06:25:44] 2025-04-19 10:25:13,462 | INFO     | mean x: 1745013994.595024
[2025-04-19 06:25:44] 2025-04-19 10:25:13,462 | INFO     | mean y: 2568415.8921907395
[2025-04-19 06:25:44] 2025-04-19 10:25:13,462 | INFO     | -- intersect: -1148476031.823078
[2025-04-19 06:25:44] 2025-04-19 10:25:13,472 | INFO     | intersect: -1148476031.823078
[2025-04-19 06:25:44] 2025-04-19 10:25:13,497 | INFO     | chi2: 2.05227173384936
[2025-04-19 06:25:44] 2025-04-19 10:25:13,497 | INFO     | current chi2=2.05227173384936 (change=6.823232566764097 %)
[2025-04-19 06:25:44] 2025-04-19 10:25:13,497 | INFO     | left removable region: 60
[2025-04-19 06:25:44] 2025-04-19 10:25:13,519 | INFO     | sum of square deviations: 871096219058.0365
[2025-04-19 06:25:44] 2025-04-19 10:25:14,073 | INFO     | sum of deviations: 449769644618.4817
[2025-04-19 06:25:44] 2025-04-19 10:25:14,073 | INFO     | mean x: 1745014726.6151667
[2025-04-19 06:25:44] 2025-04-19 10:25:14,073 | INFO     | mean y: 2577551.56626506
[2025-04-19 06:25:44] 2025-04-19 10:25:14,073 | INFO     | -- intersect: -898418958.6613035
[2025-04-19 06:25:44] 2025-04-19 10:25:14,073 | INFO     | intersect: -898418958.6613035
[2025-04-19 06:25:44] 2025-04-19 10:25:14,093 | INFO     | chi2: 0.03868841320509824
[2025-04-19 06:25:44] 2025-04-19 10:25:14,093 | INFO     | -- intersect: -898418958.6613035
[2025-04-19 06:25:44] 2025-04-19 10:25:14,107 | INFO     | current memory leak: 0.52 B/s (using 1411 data points, chi2=0.04)
[2025-04-19 06:25:44] 2025-04-19 10:25:14,117 | INFO     | ..............................
[2025-04-19 06:25:44] 2025-04-19 10:25:14,117 | INFO     | . Timing measurements:
[2025-04-19 06:25:44] 2025-04-19 10:25:14,117 | INFO     | . get job = 0 s
[2025-04-19 06:25:44] 2025-04-19 10:25:14,117 | INFO     | . initial setup = 9 s
[2025-04-19 06:25:44] 2025-04-19 10:25:14,117 | INFO     | . payload setup = 79 s
[2025-04-19 06:25:44] 2025-04-19 10:25:14,117 | INFO     | . stage-in = 0 s
[2025-04-19 06:25:44] 2025-04-19 10:25:14,118 | INFO     | . payload execution = 90168 s
[2025-04-19 06:25:44] 2025-04-19 10:25:14,118 | INFO     | . stage-out = 83 s
[2025-04-19 06:25:44] 2025-04-19 10:25:14,118 | INFO     | . log creation = 4 s
[2025-04-19 06:25:44] 2025-04-19 10:25:14,118 | INFO     | ..............................
[2025-04-19 06:25:44] 2025-04-19 10:25:14,656 | INFO     | 90556s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-04-19 06:25:44] 2025-04-19 10:25:15,238 | INFO     | 
[2025-04-19 06:25:44] 2025-04-19 10:25:15,239 | INFO     | job summary report
[2025-04-19 06:25:44] 2025-04-19 10:25:15,243 | INFO     | --------------------------------------------------
[2025-04-19 06:25:44] 2025-04-19 10:25:15,243 | INFO     | PanDA job id: 6605315211
[2025-04-19 06:25:44] 2025-04-19 10:25:15,244 | INFO     | task id: 44075483
[2025-04-19 06:25:44] 2025-04-19 10:25:15,244 | INFO     | errors: (none)
[2025-04-19 06:25:44] 2025-04-19 10:25:15,244 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-19 06:25:44] 2025-04-19 10:25:15,244 | INFO     | pilot state: finished 
[2025-04-19 06:25:44] 2025-04-19 10:25:15,244 | INFO     | transexitcode: 0
[2025-04-19 06:25:44] 2025-04-19 10:25:15,244 | INFO     | exeerrorcode: 0
[2025-04-19 06:25:44] 2025-04-19 10:25:15,244 | INFO     | exeerrordiag: 
[2025-04-19 06:25:44] 2025-04-19 10:25:15,244 | INFO     | exitcode: 0
[2025-04-19 06:25:44] 2025-04-19 10:25:15,244 | INFO     | exitmsg: OK
[2025-04-19 06:25:44] 2025-04-19 10:25:15,244 | INFO     | cpuconsumptiontime: 61069 s
[2025-04-19 06:25:44] 2025-04-19 10:25:15,244 | INFO     | nevents: 400
[2025-04-19 06:25:44] 2025-04-19 10:25:15,245 | INFO     | neventsw: 0
[2025-04-19 06:25:44] 2025-04-19 10:25:15,245 | INFO     | pid: 22577
[2025-04-19 06:25:44] 2025-04-19 10:25:15,245 | INFO     | pgrp: 22577
[2025-04-19 06:25:44] 2025-04-19 10:25:15,245 | INFO     | corecount: 10
[2025-04-19 06:25:44] 2025-04-19 10:25:15,245 | INFO     | event service: False
[2025-04-19 06:25:44] 2025-04-19 10:25:15,269 | INFO     | sizes: {0: 2426646, 1: 2426674, 2: 2426873, 13: 2426873, 24: 2426929, 35: 2426957, 46: 2427113, 57: 2427375, 69: 2427375, 90255: 2485877, 90256: 2485876, 90342: 24
[2025-04-19 06:25:44] 2025-04-19 10:25:15,270 | INFO     | --------------------------------------------------
[2025-04-19 06:25:44] 2025-04-19 10:25:15,270 | INFO     | 
[2025-04-19 06:25:44] 2025-04-19 10:25:15,270 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-19 06:25:44] 2025-04-19 10:25:16,078 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-19 06:25:44] 2025-04-19 10:25:16,078 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-19 06:25:44] 2025-04-19 10:25:16,078 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-19 06:25:44] 2025-04-19 10:25:16,078 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-19 06:25:44] 2025-04-19 10:25:16,078 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-19 06:25:44] 2025-04-19 10:25:16,079 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-19 06:25:44] 2025-04-19 10:25:16,079 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-19 06:25:44] 2025-04-19 10:25:16,079 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-19 06:25:44] 2025-04-19 10:25:16,079 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-19 06:25:44] 2025-04-19 10:25:16,079 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-19 06:25:44] 2025-04-19 10:25:16,091 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-19 06:25:44] 2025-04-19 10:25:16,092 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-19 06:25:44] 2025-04-19 10:25:16,092 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-19 06:25:44] 2025-04-19 10:25:16,092 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-19 06:25:44] 2025-04-19 10:25:16,092 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-19 06:25:44] 2025-04-19 10:25:16,148 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-19 06:25:44] 2025-04-19 10:25:16,148 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-19 06:25:44] 2025-04-19 10:25:16,149 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-19 06:25:44] 2025-04-19 10:25:16,149 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-19 06:25:44] 2025-04-19 10:25:16,149 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-19 06:25:44] 2025-04-19 10:25:16,149 | INFO     | job 6605315211 has completed (purged errors)
[2025-04-19 06:25:44] 2025-04-19 10:25:16,149 | INFO     | overall cleanup function is called
[2025-04-19 06:25:44] 2025-04-19 10:25:17,236 | INFO     | --- collectZombieJob: --- 10, [22577]
[2025-04-19 06:25:44] 2025-04-19 10:25:17,237 | INFO     | zombie collector waiting for pid 22577
[2025-04-19 06:25:44] 2025-04-19 10:25:17,237 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-19 06:25:44] 2025-04-19 10:25:17,237 | INFO     | collected zombie processes
[2025-04-19 06:25:44] 2025-04-19 10:25:17,237 | INFO     | will attempt to kill all subprocesses of pid=22577
[2025-04-19 06:25:44] 2025-04-19 10:25:27,987 | INFO     | PID=23591 has CPU usage=5.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-04-19 06:25:44] 2025-04-19 10:25:27,988 | INFO     | .. there are 40 such processes running
[2025-04-19 06:25:44] 2025-04-19 10:25:28,009 | INFO     | process IDs to be killed: [22577] (in reverse order)
[2025-04-19 06:25:44] 2025-04-19 10:25:29,502 | WARNING  | found no corresponding commands to process id(s)
[2025-04-19 06:25:44] 2025-04-19 10:25:29,506 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-19 06:25:44] 2025-04-19 10:25:29,598 | INFO     | did not find any defunct processes belonging to 22577
[2025-04-19 06:25:44] 2025-04-19 10:25:29,675 | INFO     | did not find any defunct processes belonging to 22577
[2025-04-19 06:25:44] 2025-04-19 10:25:29,702 | INFO     | ready for new job
[2025-04-19 06:25:44] 2025-04-19 10:25:29,702 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-19 06:25:44] 2025-04-19 10:25:29,734 | INFO     | **************************************
[2025-04-19 06:25:44] 2025-04-19 10:25:29,734 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-19 06:25:44] 2025-04-19 10:25:29,734 | INFO     | **************************************
[2025-04-19 06:25:44] 2025-04-19 10:25:29,734 | INFO     | 
[2025-04-19 06:25:44] 2025-04-19 10:25:29,759 | INFO     | architecture information:
[2025-04-19 06:25:44] 2025-04-19 10:25:29,781 | INFO     | executing command: cat /etc/os-release
[2025-04-19 06:25:44] 2025-04-19 10:25:29,951 | INFO     | cat /etc/os-release:
[2025-04-19 06:25:44] NAME="CentOS Linux"
[2025-04-19 06:25:44] VERSION="7 (Core)"
[2025-04-19 06:25:44] ID="centos"
[2025-04-19 06:25:44] ID_LIKE="rhel fedora"
[2025-04-19 06:25:44] VERSION_ID="7"
[2025-04-19 06:25:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-19 06:25:44] ANSI_COLOR="0;31"
[2025-04-19 06:25:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-19 06:25:44] HOME_URL="https://www.centos.org/"
[2025-04-19 06:25:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-19 06:25:44] 
[2025-04-19 06:25:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-19 06:25:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-19 06:25:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-19 06:25:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-19 06:25:44] 
[2025-04-19 06:25:44] 2025-04-19 10:25:29,951 | INFO     | **************************************
[2025-04-19 06:25:44] 2025-04-19 10:25:30,454 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-19 06:25:44] 2025-04-19 10:25:30,694 | INFO     | sufficient remaining disk space (57139003392 B)
[2025-04-19 06:25:44] 2025-04-19 10:25:30,694 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-19 06:25:44] 2025-04-19 10:25:30,694 | INFO     | current server update state: UPDATING_FINAL
[2025-04-19 06:25:44] 2025-04-19 10:25:30,695 | INFO     | update_server=False
[2025-04-19 06:25:44] 2025-04-19 10:25:30,695 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-19 06:25:44] 2025-04-19 10:25:30,707 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-19 06:25:44] 2025-04-19 10:25:30,708 | INFO     | found 0 job(s) in 20 queues
[2025-04-19 06:25:44] 2025-04-19 10:25:30,708 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-19 06:25:44] 2025-04-19 10:25:30,708 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-19 06:25:44] 2025-04-19 10:25:30,716 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-19 06:25:44] 2025-04-19 10:25:30,749 | INFO     | all payload control threads have been joined
[2025-04-19 06:25:44] 2025-04-19 10:25:31,328 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-19 06:25:44] 2025-04-19 10:25:31,333 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-19 06:25:44] 2025-04-19 10:25:31,334 | INFO     | aborting loop
[2025-04-19 06:25:44] 2025-04-19 10:25:31,537 | INFO     | all data control threads have been joined
[2025-04-19 06:25:44] 2025-04-19 10:25:31,700 | INFO     | [job] retrieve thread has finished
[2025-04-19 06:25:44] 2025-04-19 10:25:31,734 | INFO     | all job control threads have been joined
[2025-04-19 06:25:44] 2025-04-19 10:25:31,754 | INFO     | [payload] control thread has finished
[2025-04-19 06:25:44] 2025-04-19 10:25:32,207 | INFO     | [payload] validate_post thread has finished
[2025-04-19 06:25:44] 2025-04-19 10:25:32,339 | INFO     | [job] job monitor thread has finished
[2025-04-19 06:25:44] 2025-04-19 10:25:32,350 | INFO     | [payload] failed_post thread has finished
[2025-04-19 06:25:44] 2025-04-19 10:25:32,543 | INFO     | [data] control thread has finished
[2025-04-19 06:25:44] 2025-04-19 10:25:32,728 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-19 06:25:44] 2025-04-19 10:25:32,740 | INFO     | [job] control thread has finished
[2025-04-19 06:25:44] 2025-04-19 10:25:32,968 | INFO     | [job] validate thread has finished
[2025-04-19 06:25:44] 2025-04-19 10:25:33,032 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-19 06:25:44] 2025-04-19 10:25:33,107 | INFO     | [data] copytool_in thread has finished
[2025-04-19 06:25:44] 2025-04-19 10:25:33,166 | INFO     | [job] create_data_payload thread has finished
[2025-04-19 06:25:44] 2025-04-19 10:25:33,167 | INFO     | [payload] execute_payloads thread has finished
[2025-04-19 06:25:44] 2025-04-19 10:25:33,177 | INFO     | [payload] validate_pre thread has finished
[2025-04-19 06:25:44] 2025-04-19 10:25:33,334 | INFO     | [data] copytool_out thread has finished
[2025-04-19 06:25:44] 2025-04-19 10:25:33,734 | INFO     | [job] queue monitor thread has finished
[2025-04-19 06:25:44] 2025-04-19 10:25:34,724 | INFO     | [data] queue_monitor thread has finished
[2025-04-19 06:25:44] 2025-04-19 10:25:34,983 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140691000194880)>', '<ExcThread(monitor, started 140690042386176)>']
[2025-04-19 06:25:44] 2025-04-19 10:25:35,737 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-19 06:25:44] 2025-04-19 10:25:35,737 | INFO     | [monitor] control thread has ended
[2025-04-19 06:25:44] 2025-04-19 10:25:40,009 | INFO     | all workflow threads have been joined
[2025-04-19 06:25:44] 2025-04-19 10:25:40,009 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-19 06:25:44] 2025-04-19 10:25:40,018 | INFO     | traces error code: 0
[2025-04-19 06:25:44] 2025-04-19 10:25:40,019 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-19 06:25:44] 2025-04-19 10:25:40,822 [wrapper] ==== pilot stdout END ====
[2025-04-19 06:25:44] 2025-04-19 10:25:40,857 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-19 06:25:44] 2025-04-19 10:25:40,899 [wrapper] pilotpid: 23591
[2025-04-19 06:25:44] 2025-04-19 10:25:41,020 [wrapper] Pilot exit status: 0
[2025-04-19 06:25:44] 2025-04-19 10:25:41,372 [wrapper] pandaids: 6605315211 6605315211
[2025-04-19 06:25:44] 2025-04-19 10:25:42,928 [wrapper] cleanup supervisor_pilot 36537 23592
[2025-04-19 06:25:44] 2025-04-19 10:25:42,982 [wrapper] Test setup, not cleaning
[2025-04-19 06:25:44] 2025-04-19 10:25:43,022 [wrapper] apfmon messages muted
[2025-04-19 06:25:44] 2025-04-19 10:25:43,060 [wrapper] ==== wrapper stdout END ====
[2025-04-19 06:25:44] 2025-04-19 10:25:43,096 [wrapper] ==== wrapper stderr END ====
[2025-04-19 06:25:44]  *** Error codes and diagnostics ***
[2025-04-19 06:25:44]     "exeErrorCode": 0,
[2025-04-19 06:25:44]     "exeErrorDiag": "",
[2025-04-19 06:25:44]     "pilotErrorCode": 0,
[2025-04-19 06:25:44]     "pilotErrorDiag": "",
[2025-04-19 06:25:44]  *** Listing of results directory ***
[2025-04-19 06:25:44] total 645884
[2025-04-19 06:25:44] drwx------ 4 boincer umatlas      4096 Apr  3 04:00 pilot3
[2025-04-19 06:25:44] -rw-r--r-- 1 boincer umatlas    495897 Apr 17 07:57 pilot3.tar.gz
[2025-04-19 06:25:44] -rwx------ 1 boincer umatlas     37140 Apr 17 08:06 runpilot2-wrapper.sh
[2025-04-19 06:25:44] -rw-r--r-- 1 boincer umatlas      5111 Apr 17 08:06 queuedata.json
[2025-04-19 06:25:44] -rw-r--r-- 1 boincer umatlas       100 Apr 17 20:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-19 06:25:44] -rwxr-xr-x 1 boincer umatlas      7986 Apr 17 20:58 run_atlas
[2025-04-19 06:25:44] -rw-r--r-- 1 boincer umatlas       105 Apr 17 20:58 job.xml
[2025-04-19 06:25:44] -rw-r--r-- 3 boincer umatlas 223403038 Apr 17 20:58 EVNT.44075481._002161.pool.root.1
[2025-04-19 06:25:44] -rw-r--r-- 3 boincer umatlas 223403038 Apr 17 20:58 ATLAS.root_0
[2025-04-19 06:25:44] -rw-r--r-- 2 boincer umatlas     17569 Apr 17 20:58 start_atlas.sh
[2025-04-19 06:25:44] drwxrwx--x 2 boincer umatlas      4096 Apr 17 20:58 shared
[2025-04-19 06:25:44] -rw-r--r-- 2 boincer umatlas    508893 Apr 17 20:58 input.tar.gz
[2025-04-19 06:25:44] -rw-r--r-- 1 boincer umatlas         0 Apr 17 20:58 boinc_lockfile
[2025-04-19 06:25:44] -rw-r--r-- 1 boincer umatlas      2575 Apr 18 05:14 pandaJob.out
[2025-04-19 06:25:44] -rw------- 1 boincer umatlas       467 Apr 18 05:14 setup.sh.local
[2025-04-19 06:25:44] -rw------- 1 boincer umatlas    990242 Apr 18 05:15 agis_schedconf.cvmfs.json
[2025-04-19 06:25:44] -rw------- 1 boincer umatlas 197627411 Apr 19 06:19 HITS.44075483._055530.pool.root.1
[2025-04-19 06:25:44] -rw-r--r-- 1 boincer umatlas       533 Apr 19 06:20 boinc_task_state.xml
[2025-04-19 06:25:44] -rw-r--r-- 1 boincer umatlas      6229 Apr 19 06:20 init_data.xml
[2025-04-19 06:25:44] -rw------- 1 boincer umatlas      1073 Apr 19 06:22 memory_monitor_summary.json
[2025-04-19 06:25:44] -rw------- 1 boincer umatlas   1618536 Apr 19 06:22 agis_ddmendpoints.agis.ALL.json
[2025-04-19 06:25:44] -rw------- 1 boincer umatlas    953506 Apr 19 06:22 log.44075483._055530.job.log.tgz.1
[2025-04-19 06:25:44] -rw------- 1 boincer umatlas        97 Apr 19 06:25 pilot_heartbeat.json
[2025-04-19 06:25:44] -rw------- 1 boincer umatlas      7754 Apr 19 06:25 heartbeat.json
[2025-04-19 06:25:44] -rw------- 1 boincer umatlas      4476 Apr 19 06:25 pilotlog.txt
[2025-04-19 06:25:44] -rw-r--r-- 1 boincer umatlas      8192 Apr 19 06:25 boinc_mmap_file
[2025-04-19 06:25:44] -rw------- 1 boincer umatlas   5591193 Apr 19 06:25 log.44075483._055530.job.log.1
[2025-04-19 06:25:44] -rw-r--r-- 1 boincer umatlas        30 Apr 19 06:25 wrapper_checkpoint.txt
[2025-04-19 06:25:44] -rw------- 1 boincer umatlas       357 Apr 19 06:25 output.list
[2025-04-19 06:25:44] -rw-r--r-- 1 boincer umatlas       620 Apr 19 06:25 runtime_log
[2025-04-19 06:25:44] -rw------- 1 boincer umatlas   6563840 Apr 19 06:25 result.tar.gz
[2025-04-19 06:25:44] -rw------- 1 boincer umatlas       789 Apr 19 06:25 uEHNDmZBdP7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmxw3KDmOEtFUm.diag
[2025-04-19 06:25:44] -rw-r--r-- 1 boincer umatlas     11501 Apr 19 06:25 runtime_log.err
[2025-04-19 06:25:44] -rw-r--r-- 1 boincer umatlas     23440 Apr 19 06:25 stderr.txt
[2025-04-19 06:25:44] HITS file was successfully produced:
[2025-04-19 06:25:44] -rw------- 1 boincer umatlas 197627411 Apr 19 06:19 shared/HITS.pool.root.1
[2025-04-19 06:25:44]  *** Contents of shared directory: ***
[2025-04-19 06:25:44] total 418100
[2025-04-19 06:25:44] -rw-r--r-- 3 boincer umatlas 223403038 Apr 17 20:58 ATLAS.root_0
[2025-04-19 06:25:44] -rw-r--r-- 2 boincer umatlas     17569 Apr 17 20:58 start_atlas.sh
[2025-04-19 06:25:44] -rw-r--r-- 2 boincer umatlas    508893 Apr 17 20:58 input.tar.gz
[2025-04-19 06:25:44] -rw------- 1 boincer umatlas 197627411 Apr 19 06:19 HITS.pool.root.1
[2025-04-19 06:25:44] -rw------- 1 boincer umatlas   6563840 Apr 19 06:25 result.tar.gz
06:25:46 (8389): run_atlas exited; CPU time 64297.598633
06:25:46 (8389): called boinc_finish(0)

</stderr_txt>
]]>

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