Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
21:00:51 (29534): wrapper (7.7.26015): starting
21:00:51 (29534): wrapper: running run_atlas (--nthreads 10)
[2025-04-17 21:00:51] Arguments: --nthreads 10
[2025-04-17 21:00:51] Threads: 10
[2025-04-17 21:00:51] Checking for CVMFS
[2025-04-17 21:00:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-17 21:00:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-17 21:00:52] Running cvmfs_config stat atlas.cern.ch
[2025-04-17 21:00:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-17 21:00:54] 2.11.2.0 20863 26120 231272 144983 3 462 13643278 18432001 16593 130560 0 123058643 98.964 288976592 36539 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-17 21:00:54] CVMFS is ok
[2025-04-17 21:00:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-17 21:00:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-17 21:00:54] Further information can be found at the LHC@home message board.
[2025-04-17 21:00:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-17 21:00:54] Checking for apptainer binary...
[2025-04-17 21:00:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-17 21:00:54] Running /usr/bin/apptainer --version
[2025-04-17 21:00:54] apptainer version 1.3.2-1.el7
[2025-04-17 21:00:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-17 21:00:59] c-210-1.aglt2.org
[2025-04-17 21:00:59] apptainer works
[2025-04-17 21:00:59] Set ATHENA_PROC_NUMBER=10
[2025-04-17 21:00:59] Set ATHENA_CORE_NUMBER=10
[2025-04-17 21:00:59] Starting ATLAS job with PandaID=6605896323
[2025-04-17 21:00:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
05:14:03 (8390): wrapper (7.7.26015): starting
05:14:03 (8390): wrapper: running run_atlas (--nthreads 10)
[2025-04-18 05:14:03] Arguments: --nthreads 10
[2025-04-18 05:14:03] Threads: 10
[2025-04-18 05:14:03] This job has been restarted, cleaning up previous attempt
[2025-04-18 05:14:03] Checking for CVMFS
[2025-04-18 05:14:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-18 05:14:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-18 05:14:05] Running cvmfs_config stat atlas.cern.ch
[2025-04-18 05:14:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-18 05:14:07] 2.11.2.0 20863 26613 221852 144996 2 62 17677090 18432001 12099 130560 0 124505224 98.960 293620711 36525 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-18 05:14:07] CVMFS is ok
[2025-04-18 05:14:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-18 05:14:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-18 05:14:07] Further information can be found at the LHC@home message board.
[2025-04-18 05:14:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-18 05:14:07] Checking for apptainer binary...
[2025-04-18 05:14:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-18 05:14:07] Running /usr/bin/apptainer --version
[2025-04-18 05:14:07] apptainer version 1.3.2-1.el7
[2025-04-18 05:14:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-18 05:14:28] c-210-1.aglt2.org
[2025-04-18 05:14:28] apptainer works
[2025-04-18 05:14:28] Set ATHENA_PROC_NUMBER=10
[2025-04-18 05:14:28] Set ATHENA_CORE_NUMBER=10
[2025-04-18 05:14:28] Starting ATLAS job with PandaID=6605896323
[2025-04-18 05:14:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-19 05:57:00]  *** The last 200 lines of the pilot log: ***
[2025-04-19 05:57:00] 2025-04-19 09:56:35,466 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-19 05:57:00] 2025-04-19 09:56:35,602 | INFO     | fitting pss+swap vs Time
[2025-04-19 05:57:00] 2025-04-19 09:56:35,636 | INFO     | sum of square deviations: 945337605730.8943
[2025-04-19 05:57:00] 2025-04-19 09:56:35,784 | INFO     | sum of deviations: 1874179320166.2642
[2025-04-19 05:57:00] 2025-04-19 09:56:35,784 | INFO     | mean x: 1745012256.102069
[2025-04-19 05:57:00] 2025-04-19 09:56:35,784 | INFO     | mean y: 2538491.5117241377
[2025-04-19 05:57:00] 2025-04-19 09:56:35,784 | INFO     | -- intersect: -3457036018.162617
[2025-04-19 05:57:00] 2025-04-19 09:56:35,784 | INFO     | intersect: -3457036018.162617
[2025-04-19 05:57:00] 2025-04-19 09:56:35,790 | INFO     | chi2: 15.855658234787436
[2025-04-19 05:57:00] 2025-04-19 09:56:35,793 | INFO     | sum of square deviations: 935592745460.5156
[2025-04-19 05:57:00] 2025-04-19 09:56:36,112 | INFO     | sum of deviations: 2377161479389.4326
[2025-04-19 05:57:00] 2025-04-19 09:56:36,113 | INFO     | mean x: 1745012103.6076124
[2025-04-19 05:57:00] 2025-04-19 09:56:36,113 | INFO     | mean y: 2546362.833217993
[2025-04-19 05:57:00] 2025-04-19 09:56:36,113 | INFO     | -- intersect: -4431194251.222667
[2025-04-19 05:57:00] 2025-04-19 09:56:36,114 | INFO     | intersect: -4431194251.222667
[2025-04-19 05:57:00] 2025-04-19 09:56:36,119 | INFO     | chi2: 11.879843963981262
[2025-04-19 05:57:00] 2025-04-19 09:56:36,119 | INFO     | current chi2=11.879843963981262 (change=25.075050256085913 %)
[2025-04-19 05:57:00] 2025-04-19 09:56:36,124 | INFO     | sum of square deviations: 925914654424.6587
[2025-04-19 05:57:00] 2025-04-19 09:56:36,264 | INFO     | sum of deviations: 2366504288233.702
[2025-04-19 05:57:00] 2025-04-19 09:56:36,265 | INFO     | mean x: 1745011951.1097221
[2025-04-19 05:57:00] 2025-04-19 09:56:36,265 | INFO     | mean y: 2546194.9069444444
[2025-04-19 05:57:00] 2025-04-19 09:56:36,265 | INFO     | -- intersect: -4457452624.191819
[2025-04-19 05:57:00] 2025-04-19 09:56:36,265 | INFO     | intersect: -4457452624.191819
[2025-04-19 05:57:00] 2025-04-19 09:56:36,267 | INFO     | chi2: 11.880415224398917
[2025-04-19 05:57:00] 2025-04-19 09:56:36,267 | INFO     | current chi2=11.880415224398917 (change=-0.004808652532696935 %)
[2025-04-19 05:57:00] 2025-04-19 09:56:36,267 | INFO     | right removable region: 1439
[2025-04-19 05:57:00] 2025-04-19 09:56:36,269 | INFO     | sum of square deviations: 935591328430.5154
[2025-04-19 05:57:00] 2025-04-19 09:56:36,324 | INFO     | sum of deviations: 1356129683426.1467
[2025-04-19 05:57:00] 2025-04-19 09:56:36,324 | INFO     | mean x: 1745012408.6076124
[2025-04-19 05:57:00] 2025-04-19 09:56:36,324 | INFO     | mean y: 2546596.732179931
[2025-04-19 05:57:00] 2025-04-19 09:56:36,325 | INFO     | -- intersect: -2526830336.7090025
[2025-04-19 05:57:00] 2025-04-19 09:56:36,325 | INFO     | intersect: -2526830336.7090025
[2025-04-19 05:57:00] 2025-04-19 09:56:36,327 | INFO     | chi2: 11.425336774348656
[2025-04-19 05:57:00] 2025-04-19 09:56:36,327 | INFO     | current chi2=11.425336774348656 (change=27.94158019071463 %)
[2025-04-19 05:57:00] 2025-04-19 09:56:36,329 | INFO     | sum of square deviations: 925912261692.5479
[2025-04-19 05:57:00] 2025-04-19 09:56:36,372 | INFO     | monitor loop #3683: job 0:6605896323 is in state 'finished'
[2025-04-19 05:57:00] 2025-04-19 09:56:36,373 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 05:57:00] 2025-04-19 09:56:36,402 | INFO     | sum of deviations: 943210157295.3705
[2025-04-19 05:57:00] 2025-04-19 09:56:36,403 | INFO     | mean x: 1745012561.1131945
[2025-04-19 05:57:00] 2025-04-19 09:56:36,403 | INFO     | mean y: 2553101.54375
[2025-04-19 05:57:00] 2025-04-19 09:56:36,403 | INFO     | -- intersect: -1775059789.3810105
[2025-04-19 05:57:00] 2025-04-19 09:56:36,406 | INFO     | intersect: -1775059789.3810105
[2025-04-19 05:57:00] 2025-04-19 09:56:36,411 | INFO     | chi2: 8.658472268564152
[2025-04-19 05:57:00] 2025-04-19 09:56:36,411 | INFO     | current chi2=8.658472268564152 (change=24.216918594438887 %)
[2025-04-19 05:57:00] 2025-04-19 09:56:36,411 | INFO     | left removable region: 20
[2025-04-19 05:57:00] 2025-04-19 09:56:36,415 | INFO     | sum of square deviations: 885991902887.0208
[2025-04-19 05:57:00] 2025-04-19 09:56:36,545 | INFO     | sum of deviations: 780682430426.7025
[2025-04-19 05:57:00] 2025-04-19 09:56:36,545 | INFO     | mean x: 1745012530.6293163
[2025-04-19 05:57:00] 2025-04-19 09:56:36,545 | INFO     | mean y: 2571548.497533474
[2025-04-19 05:57:00] 2025-04-19 09:56:36,545 | INFO     | -- intersect: -1535027857.4311934
[2025-04-19 05:57:00] 2025-04-19 09:56:36,546 | INFO     | intersect: -1535027857.4311934
[2025-04-19 05:57:00] 2025-04-19 09:56:36,548 | INFO     | chi2: 1.1515473513618044
[2025-04-19 05:57:00] 2025-04-19 09:56:36,548 | INFO     | -- intersect: -1535027857.4311934
[2025-04-19 05:57:00] 2025-04-19 09:56:36,548 | INFO     | current memory leak: 0.88 B/s (using 1419 data points, chi2=1.15)
[2025-04-19 05:57:00] 2025-04-19 09:56:36,550 | INFO     | ..............................
[2025-04-19 05:57:00] 2025-04-19 09:56:36,550 | INFO     | . Timing measurements:
[2025-04-19 05:57:00] 2025-04-19 09:56:36,550 | INFO     | . get job = 0 s
[2025-04-19 05:57:00] 2025-04-19 09:56:36,550 | INFO     | . initial setup = 9 s
[2025-04-19 05:57:00] 2025-04-19 09:56:36,551 | INFO     | . payload setup = 86 s
[2025-04-19 05:57:00] 2025-04-19 09:56:36,551 | INFO     | . stage-in = 0 s
[2025-04-19 05:57:00] 2025-04-19 09:56:36,551 | INFO     | . payload execution = 88509 s
[2025-04-19 05:57:00] 2025-04-19 09:56:36,555 | INFO     | . stage-out = 17 s
[2025-04-19 05:57:00] 2025-04-19 09:56:36,555 | INFO     | . log creation = 1 s
[2025-04-19 05:57:00] 2025-04-19 09:56:36,555 | INFO     | ..............................
[2025-04-19 05:57:00] 2025-04-19 09:56:36,708 | INFO     | 
[2025-04-19 05:57:00] 2025-04-19 09:56:36,708 | INFO     | job summary report
[2025-04-19 05:57:00] 2025-04-19 09:56:36,708 | INFO     | --------------------------------------------------
[2025-04-19 05:57:00] 2025-04-19 09:56:36,709 | INFO     | PanDA job id: 6605896323
[2025-04-19 05:57:00] 2025-04-19 09:56:36,709 | INFO     | task id: 44075483
[2025-04-19 05:57:00] 2025-04-19 09:56:36,709 | INFO     | errors: (none)
[2025-04-19 05:57:00] 2025-04-19 09:56:36,709 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-19 05:57:00] 2025-04-19 09:56:36,709 | INFO     | pilot state: finished 
[2025-04-19 05:57:00] 2025-04-19 09:56:36,709 | INFO     | transexitcode: 0
[2025-04-19 05:57:00] 2025-04-19 09:56:36,709 | INFO     | exeerrorcode: 0
[2025-04-19 05:57:00] 2025-04-19 09:56:36,709 | INFO     | exeerrordiag: 
[2025-04-19 05:57:00] 2025-04-19 09:56:36,709 | INFO     | exitcode: 0
[2025-04-19 05:57:00] 2025-04-19 09:56:36,710 | INFO     | exitmsg: OK
[2025-04-19 05:57:00] 2025-04-19 09:56:36,710 | INFO     | cpuconsumptiontime: 59692 s
[2025-04-19 05:57:00] 2025-04-19 09:56:36,710 | INFO     | nevents: 400
[2025-04-19 05:57:00] 2025-04-19 09:56:36,710 | INFO     | neventsw: 0
[2025-04-19 05:57:00] 2025-04-19 09:56:36,710 | INFO     | pid: 22579
[2025-04-19 05:57:00] 2025-04-19 09:56:36,710 | INFO     | pgrp: 22579
[2025-04-19 05:57:00] 2025-04-19 09:56:36,710 | INFO     | corecount: 10
[2025-04-19 05:57:00] 2025-04-19 09:56:36,710 | INFO     | event service: False
[2025-04-19 05:57:00] 2025-04-19 09:56:36,710 | INFO     | sizes: {0: 2426596, 1: 2426652, 3: 2426680, 4: 2426879, 5: 2426963, 16: 2426963, 27: 2427119, 38: 2427147, 49: 2427175, 56: 2427409, 59: 2427437, 88603: 2485810, 8
[2025-04-19 05:57:00] 2025-04-19 09:56:36,710 | INFO     | --------------------------------------------------
[2025-04-19 05:57:00] 2025-04-19 09:56:36,711 | INFO     | 
[2025-04-19 05:57:00] 2025-04-19 09:56:36,711 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-04-19 05:57:00] 2025-04-19 09:56:37,312 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-19 05:57:00] 2025-04-19 09:56:37,329 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-19 05:57:00] 2025-04-19 09:56:37,330 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-19 05:57:00] 2025-04-19 09:56:37,330 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-19 05:57:00] 2025-04-19 09:56:37,330 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-19 05:57:00] 2025-04-19 09:56:37,330 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-19 05:57:00] 2025-04-19 09:56:37,332 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-19 05:57:00] 2025-04-19 09:56:37,332 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-19 05:57:00] 2025-04-19 09:56:37,333 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-19 05:57:00] 2025-04-19 09:56:37,333 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-19 05:57:00] 2025-04-19 09:56:37,333 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-19 05:57:00] 2025-04-19 09:56:37,333 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-19 05:57:00] 2025-04-19 09:56:37,333 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-19 05:57:00] 2025-04-19 09:56:37,333 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-19 05:57:00] 2025-04-19 09:56:37,333 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-19 05:57:00] 2025-04-19 09:56:37,333 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-19 05:57:00] 2025-04-19 09:56:37,334 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-19 05:57:00] 2025-04-19 09:56:37,334 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-19 05:57:00] 2025-04-19 09:56:37,334 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-19 05:57:00] 2025-04-19 09:56:37,334 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-19 05:57:00] 2025-04-19 09:56:37,334 | INFO     | job 6605896323 has completed (purged errors)
[2025-04-19 05:57:00] 2025-04-19 09:56:37,334 | INFO     | overall cleanup function is called
[2025-04-19 05:57:00] 2025-04-19 09:56:38,370 | INFO     | --- collectZombieJob: --- 10, [22579]
[2025-04-19 05:57:00] 2025-04-19 09:56:38,370 | INFO     | zombie collector waiting for pid 22579
[2025-04-19 05:57:00] 2025-04-19 09:56:38,371 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-19 05:57:00] 2025-04-19 09:56:38,371 | INFO     | collected zombie processes
[2025-04-19 05:57:00] 2025-04-19 09:56:38,371 | INFO     | will attempt to kill all subprocesses of pid=22579
[2025-04-19 05:57:00] 2025-04-19 09:56:41,315 | INFO     | process IDs to be killed: [22579] (in reverse order)
[2025-04-19 05:57:00] 2025-04-19 09:56:42,715 | WARNING  | found no corresponding commands to process id(s)
[2025-04-19 05:57:00] 2025-04-19 09:56:42,715 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-19 05:57:00] 2025-04-19 09:56:42,752 | INFO     | did not find any defunct processes belonging to 22579
[2025-04-19 05:57:00] 2025-04-19 09:56:42,787 | INFO     | did not find any defunct processes belonging to 22579
[2025-04-19 05:57:00] 2025-04-19 09:56:42,787 | INFO     | ready for new job
[2025-04-19 05:57:00] 2025-04-19 09:56:42,787 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-19 05:57:00] 2025-04-19 09:56:42,792 | INFO     | **************************************
[2025-04-19 05:57:00] 2025-04-19 09:56:42,792 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-19 05:57:00] 2025-04-19 09:56:42,792 | INFO     | **************************************
[2025-04-19 05:57:00] 2025-04-19 09:56:42,792 | INFO     | 
[2025-04-19 05:57:00] 2025-04-19 09:56:42,794 | INFO     | architecture information:
[2025-04-19 05:57:00] 2025-04-19 09:56:42,807 | INFO     | executing command: cat /etc/os-release
[2025-04-19 05:57:00] 2025-04-19 09:56:43,234 | INFO     | cat /etc/os-release:
[2025-04-19 05:57:00] NAME="CentOS Linux"
[2025-04-19 05:57:00] VERSION="7 (Core)"
[2025-04-19 05:57:00] ID="centos"
[2025-04-19 05:57:00] ID_LIKE="rhel fedora"
[2025-04-19 05:57:00] VERSION_ID="7"
[2025-04-19 05:57:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-19 05:57:00] ANSI_COLOR="0;31"
[2025-04-19 05:57:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-19 05:57:00] HOME_URL="https://www.centos.org/"
[2025-04-19 05:57:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-19 05:57:00] 
[2025-04-19 05:57:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-19 05:57:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-19 05:57:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-19 05:57:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-19 05:57:00] 
[2025-04-19 05:57:00] 2025-04-19 09:56:43,235 | INFO     | **************************************
[2025-04-19 05:57:00] 2025-04-19 09:56:43,740 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-04-19 05:57:00] 2025-04-19 09:56:43,871 | INFO     | sufficient remaining disk space (56940822528 B)
[2025-04-19 05:57:00] 2025-04-19 09:56:43,871 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-19 05:57:00] 2025-04-19 09:56:43,873 | INFO     | current server update state: UPDATING_FINAL
[2025-04-19 05:57:00] 2025-04-19 09:56:43,874 | INFO     | update_server=False
[2025-04-19 05:57:00] 2025-04-19 09:56:43,874 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-19 05:57:00] 2025-04-19 09:56:43,874 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-19 05:57:00] 2025-04-19 09:56:43,998 | INFO     | PID=23657 has CPU usage=6.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-04-19 05:57:00] 2025-04-19 09:56:43,999 | INFO     | .. there are 40 such processes running
[2025-04-19 05:57:00] 2025-04-19 09:56:43,999 | INFO     | found 0 job(s) in 20 queues
[2025-04-19 05:57:00] 2025-04-19 09:56:43,999 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-19 05:57:00] 2025-04-19 09:56:44,003 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-19 05:57:00] 2025-04-19 09:56:44,020 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-04-19 05:57:00] 2025-04-19 09:56:44,021 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-04-19 05:57:00] 2025-04-19 09:56:44,021 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-19 05:57:00] 2025-04-19 09:56:44,021 | INFO     | will abort loop
[2025-04-19 05:57:00] 2025-04-19 09:56:44,266 | INFO     | all payload control threads have been joined
[2025-04-19 05:57:00] 2025-04-19 09:56:44,454 | INFO     | all job control threads have been joined
[2025-04-19 05:57:00] 2025-04-19 09:56:44,784 | INFO     | all data control threads have been joined
[2025-04-19 05:57:00] 2025-04-19 09:56:44,887 | INFO     | [job] retrieve thread has finished
[2025-04-19 05:57:00] 2025-04-19 09:56:45,028 | INFO     | [job] job monitor thread has finished
[2025-04-19 05:57:00] 2025-04-19 09:56:45,210 | INFO     | [payload] validate_post thread has finished
[2025-04-19 05:57:00] 2025-04-19 09:56:45,271 | INFO     | [payload] control thread has finished
[2025-04-19 05:57:00] 2025-04-19 09:56:45,371 | INFO     | [payload] execute_payloads thread has finished
[2025-04-19 05:57:00] 2025-04-19 09:56:45,379 | INFO     | [payload] validate_pre thread has finished
[2025-04-19 05:57:00] 2025-04-19 09:56:45,385 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-19 05:57:00] 2025-04-19 09:56:45,389 | INFO     | [job] create_data_payload thread has finished
[2025-04-19 05:57:00] 2025-04-19 09:56:45,394 | INFO     | [data] copytool_in thread has finished
[2025-04-19 05:57:00] 2025-04-19 09:56:45,395 | INFO     | [job] validate thread has finished
[2025-04-19 05:57:00] 2025-04-19 09:56:45,451 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-19 05:57:00] 2025-04-19 09:56:45,461 | INFO     | [job] control thread has finished
[2025-04-19 05:57:00] 2025-04-19 09:56:45,768 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-19 05:57:00] 2025-04-19 09:56:45,772 | INFO     | [payload] failed_post thread has finished
[2025-04-19 05:57:00] 2025-04-19 09:56:45,802 | INFO     | [data] control thread has finished
[2025-04-19 05:57:00] 2025-04-19 09:56:45,893 | INFO     | [data] copytool_out thread has finished
[2025-04-19 05:57:00] 2025-04-19 09:56:46,775 | INFO     | [job] queue monitor thread has finished
[2025-04-19 05:57:00] 2025-04-19 09:56:49,465 | INFO     | [data] queue_monitor thread has finished
[2025-04-19 05:57:00] 2025-04-19 09:56:50,697 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139679685052224)>', '<ExcThread(monitor, started 139679114458880)>']
[2025-04-19 05:57:00] 2025-04-19 09:56:51,054 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-19 05:57:00] 2025-04-19 09:56:51,054 | INFO     | [monitor] control thread has ended
[2025-04-19 05:57:00] 2025-04-19 09:56:55,723 | INFO     | all workflow threads have been joined
[2025-04-19 05:57:00] 2025-04-19 09:56:55,727 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-19 05:57:00] 2025-04-19 09:56:55,727 | INFO     | traces error code: 0
[2025-04-19 05:57:00] 2025-04-19 09:56:55,727 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-19 05:57:00] 2025-04-19 09:56:56,902 [wrapper] ==== pilot stdout END ====
[2025-04-19 05:57:00] 2025-04-19 09:56:56,944 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-19 05:57:00] 2025-04-19 09:56:57,033 [wrapper] pilotpid: 23657
[2025-04-19 05:57:00] 2025-04-19 09:56:57,093 [wrapper] Pilot exit status: 0
[2025-04-19 05:57:00] 2025-04-19 09:56:57,278 [wrapper] pandaids: 6605896323 6605896323
[2025-04-19 05:57:00] 2025-04-19 09:56:58,088 [wrapper] cleanup supervisor_pilot 11589 23658
[2025-04-19 05:57:00] 2025-04-19 09:56:58,123 [wrapper] Test setup, not cleaning
[2025-04-19 05:57:00] 2025-04-19 09:56:58,156 [wrapper] apfmon messages muted
[2025-04-19 05:57:00] 2025-04-19 09:56:58,231 [wrapper] ==== wrapper stdout END ====
[2025-04-19 05:57:00] 2025-04-19 09:56:58,681 [wrapper] ==== wrapper stderr END ====
[2025-04-19 05:57:00]  *** Error codes and diagnostics ***
[2025-04-19 05:57:00]     "exeErrorCode": 0,
[2025-04-19 05:57:00]     "exeErrorDiag": "",
[2025-04-19 05:57:00]     "pilotErrorCode": 0,
[2025-04-19 05:57:00]     "pilotErrorDiag": "",
[2025-04-19 05:57:00]  *** Listing of results directory ***
[2025-04-19 05:57:00] total 643024
[2025-04-19 05:57:00] drwx------ 4 boincer umatlas      4096 Apr  3 04:00 pilot3
[2025-04-19 05:57:00] -rw-r--r-- 1 boincer umatlas    495897 Apr 17 16:53 pilot3.tar.gz
[2025-04-19 05:57:00] -rw-r--r-- 1 boincer umatlas      5111 Apr 17 17:04 queuedata.json
[2025-04-19 05:57:00] -rwx------ 1 boincer umatlas     37140 Apr 17 17:05 runpilot2-wrapper.sh
[2025-04-19 05:57:00] -rw-r--r-- 1 boincer umatlas       100 Apr 17 21:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-19 05:57:00] -rwxr-xr-x 1 boincer umatlas      7986 Apr 17 21:00 run_atlas
[2025-04-19 05:57:00] -rw-r--r-- 1 boincer umatlas       105 Apr 17 21:00 job.xml
[2025-04-19 05:57:00] -rw-r--r-- 3 boincer umatlas 224211285 Apr 17 21:00 EVNT.44075481._002356.pool.root.1
[2025-04-19 05:57:00] -rw-r--r-- 3 boincer umatlas 224211285 Apr 17 21:00 ATLAS.root_0
[2025-04-19 05:57:00] -rw-r--r-- 2 boincer umatlas     17569 Apr 17 21:00 start_atlas.sh
[2025-04-19 05:57:00] drwxrwx--x 2 boincer umatlas      4096 Apr 17 21:00 shared
[2025-04-19 05:57:00] -rw-r--r-- 2 boincer umatlas    508897 Apr 17 21:00 input.tar.gz
[2025-04-19 05:57:00] -rw-r--r-- 1 boincer umatlas         0 Apr 17 21:00 boinc_lockfile
[2025-04-19 05:57:00] -rw-r--r-- 1 boincer umatlas      2578 Apr 18 05:14 pandaJob.out
[2025-04-19 05:57:00] -rw------- 1 boincer umatlas       467 Apr 18 05:14 setup.sh.local
[2025-04-19 05:57:00] -rw------- 1 boincer umatlas    990242 Apr 18 05:15 agis_schedconf.cvmfs.json
[2025-04-19 05:57:00] -rw-r--r-- 1 boincer umatlas      6229 Apr 19 05:48 init_data.xml
[2025-04-19 05:57:00] -rw------- 1 boincer umatlas 193199524 Apr 19 05:49 HITS.44075483._060614.pool.root.1
[2025-04-19 05:57:00] -rw-r--r-- 1 boincer umatlas       533 Apr 19 05:49 boinc_task_state.xml
[2025-04-19 05:57:00] -rw------- 1 boincer umatlas      1059 Apr 19 05:54 memory_monitor_summary.json
[2025-04-19 05:57:00] -rw------- 1 boincer umatlas   1618536 Apr 19 05:54 agis_ddmendpoints.agis.ALL.json
[2025-04-19 05:57:00] -rw------- 1 boincer umatlas    975632 Apr 19 05:55 log.44075483._060614.job.log.tgz.1
[2025-04-19 05:57:00] -rw------- 1 boincer umatlas        96 Apr 19 05:55 pilot_heartbeat.json
[2025-04-19 05:57:00] -rw------- 1 boincer umatlas      7761 Apr 19 05:56 heartbeat.json
[2025-04-19 05:57:00] -rw-r--r-- 1 boincer umatlas      8192 Apr 19 05:56 boinc_mmap_file
[2025-04-19 05:57:00] -rw-r--r-- 1 boincer umatlas        30 Apr 19 05:56 wrapper_checkpoint.txt
[2025-04-19 05:57:00] -rw------- 1 boincer umatlas      4932 Apr 19 05:56 pilotlog.txt
[2025-04-19 05:57:00] -rw------- 1 boincer umatlas   5507350 Apr 19 05:56 log.44075483._060614.job.log.1
[2025-04-19 05:57:00] -rw------- 1 boincer umatlas       357 Apr 19 05:56 output.list
[2025-04-19 05:57:00] -rw-r--r-- 1 boincer umatlas       620 Apr 19 05:56 runtime_log
[2025-04-19 05:57:00] -rw------- 1 boincer umatlas   6502400 Apr 19 05:56 result.tar.gz
[2025-04-19 05:57:00] -rw-r--r-- 1 boincer umatlas     11501 Apr 19 05:57 runtime_log.err
[2025-04-19 05:57:00] -rw------- 1 boincer umatlas       789 Apr 19 05:57 JCONDmZblP7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDm6jdLDmXIBO3n.diag
[2025-04-19 05:57:00] -rw-r--r-- 1 boincer umatlas     23234 Apr 19 05:57 stderr.txt
[2025-04-19 05:57:00] HITS file was successfully produced:
[2025-04-19 05:57:00] -rw------- 1 boincer umatlas 193199524 Apr 19 05:49 shared/HITS.pool.root.1
[2025-04-19 05:57:00]  *** Contents of shared directory: ***
[2025-04-19 05:57:00] total 414508
[2025-04-19 05:57:00] -rw-r--r-- 3 boincer umatlas 224211285 Apr 17 21:00 ATLAS.root_0
[2025-04-19 05:57:00] -rw-r--r-- 2 boincer umatlas     17569 Apr 17 21:00 start_atlas.sh
[2025-04-19 05:57:00] -rw-r--r-- 2 boincer umatlas    508897 Apr 17 21:00 input.tar.gz
[2025-04-19 05:57:00] -rw------- 1 boincer umatlas 193199524 Apr 19 05:49 HITS.pool.root.1
[2025-04-19 05:57:00] -rw------- 1 boincer umatlas   6502400 Apr 19 05:56 result.tar.gz
05:57:02 (8390): run_atlas exited; CPU time 62799.811463
05:57:02 (8390): called boinc_finish(0)

</stderr_txt>
]]>

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