Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
23:49:48 (6158): wrapper (7.7.26015): starting
23:49:48 (6158): wrapper: running run_atlas (--nthreads 12)
[2025-04-18 23:49:48] Arguments: --nthreads 12
[2025-04-18 23:49:48] Threads: 12
[2025-04-18 23:49:48] Checking for CVMFS
[2025-04-18 23:49:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-18 23:49:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-18 23:49:48] Running cvmfs_config stat atlas.cern.ch
[2025-04-18 23:49:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-18 23:49:48] 2.10.0.0 17295 109 57776 145026 0 61 9271838 16777217 0 130560 0 236053 99.986 145153 31713 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://127.0.0.1:3128 1
[2025-04-18 23:49:48] CVMFS is ok
[2025-04-18 23:49:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-18 23:49:48] Checking for apptainer binary...
[2025-04-18 23:49:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-18 23:49:48] Running /usr/bin/apptainer --version
[2025-04-18 23:49:48] apptainer version 1.3.6-150600.4.9.1
[2025-04-18 23:49:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-18 23:49:48] boinc-runner
[2025-04-18 23:49:48] apptainer works
[2025-04-18 23:49:48] Set ATHENA_PROC_NUMBER=12
[2025-04-18 23:49:48] Set ATHENA_CORE_NUMBER=12
[2025-04-18 23:49:48] Starting ATLAS job with PandaID=6605895958
[2025-04-18 23:49:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/18 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-19 00:27:10]  *** The last 200 lines of the pilot log: ***
[2025-04-19 00:27:10]  filetype=log
[2025-04-19 00:27:10]  guid=4cd36aee-143e-49b1-8337-ec2c3c03b5d3
[2025-04-19 00:27:10]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-04-19 00:27:10]  is_altstaged=None
[2025-04-19 00:27:10]  is_tar=False
[2025-04-19 00:27:10]  lfn=log.44075483._060344.job.log.tgz.1
[2025-04-19 00:27:10]  mtime=0
[2025-04-19 00:27:10]  protocol_id=None
[2025-04-19 00:27:10]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-19 00:27:10]  replicas=None
[2025-04-19 00:27:10]  scope=mc23_13p6TeV
[2025-04-19 00:27:10]  status=None
[2025-04-19 00:27:10]  status_code=0
[2025-04-19 00:27:10]  storage_token=
[2025-04-19 00:27:10]  surl=/var/lib/boinc/slots/18/PanDA_Pilot-6605895958/log.44075483._060344.job.log.tgz.1
[2025-04-19 00:27:10]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/78/fe/log.44075483._060344.job.log.tgz.1
[2025-04-19 00:27:10]  workdir=None
[2025-04-19 00:27:10] ]
[2025-04-19 00:27:10] 2025-04-19 05:26:45,247 | INFO     | transferring file log.44075483._060344.job.log.tgz.1 from /var/lib/boinc/slots/18/PanDA_Pilot-6605895958/log.44075483._060344.job.log.tgz.1 to /var/lib/boinc/slots
[2025-04-19 00:27:10] 2025-04-19 05:26:45,247 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/18/PanDA_Pilot-6605895958/log.44075483._060344.job.log.tgz.1 /var/lib/boinc/slots/18/log.44075483._060344.j
[2025-04-19 00:27:10] 2025-04-19 05:26:45,258 | INFO     | adding to output.list: log.44075483._060344.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/78/fe/log.44075483._060344.job.log.tg
[2025-04-19 00:27:10] 2025-04-19 05:26:45,259 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-19 00:27:10] 2025-04-19 05:26:45,259 | INFO     | summary of transferred files:
[2025-04-19 00:27:10] 2025-04-19 05:26:45,259 | INFO     |  -- lfn=log.44075483._060344.job.log.tgz.1, status_code=0, status=transferred
[2025-04-19 00:27:10] 2025-04-19 05:26:45,259 | INFO     | stage-out finished correctly
[2025-04-19 00:27:10] 2025-04-19 05:26:46,260 | INFO     | PID=9976 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-04-19 00:27:10] 2025-04-19 05:26:46,934 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-19 00:27:10] 2025-04-19 05:26:46,969 | INFO     | job 6605895958 has state=finished
[2025-04-19 00:27:10] 2025-04-19 05:26:46,969 | INFO     | preparing for final server update for job 6605895958 in state='finished'
[2025-04-19 00:27:10] 2025-04-19 05:26:46,970 | INFO     | this job has now completed (state=finished)
[2025-04-19 00:27:10] 2025-04-19 05:26:46,970 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-19 00:27:10] 2025-04-19 05:26:46,970 | INFO     | log transfer has been attempted: DONE
[2025-04-19 00:27:10] 2025-04-19 05:26:46,970 | INFO     | job 6605895958 has finished - writing final server update
[2025-04-19 00:27:10] 2025-04-19 05:26:46,970 | INFO     | total number of processed events: 400 (read)
[2025-04-19 00:27:10] 2025-04-19 05:26:46,971 | INFO     | executing command: lscpu
[2025-04-19 00:27:10] 2025-04-19 05:26:46,988 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-19 00:27:10] 2025-04-19 05:26:48,086 | WARNING  | process 16860 can no longer be monitored (due to stat problems) - aborting
[2025-04-19 00:27:10] 2025-04-19 05:26:48,086 | INFO     | using path: /var/lib/boinc/slots/18/PanDA_Pilot-6605895958/memory_monitor_summary.json (trf name=prmon)
[2025-04-19 00:27:10] 2025-04-19 05:26:48,123 | INFO     | number of running child processes to parent process 16860: 1
[2025-04-19 00:27:10] 2025-04-19 05:26:48,123 | INFO     | maximum number of monitored processes: 6
[2025-04-19 00:27:10] 2025-04-19 05:26:50,387 | INFO     | CPU arch script returned: x86-64-v4
[2025-04-19 00:27:10] 2025-04-19 05:26:50,388 | INFO     | using path: /var/lib/boinc/slots/18/PanDA_Pilot-6605895958/memory_monitor_summary.json (trf name=prmon)
[2025-04-19 00:27:10] 2025-04-19 05:26:50,388 | INFO     | extracted standard info from prmon json
[2025-04-19 00:27:10] 2025-04-19 05:26:50,388 | INFO     | extracted standard memory fields from prmon json
[2025-04-19 00:27:10] 2025-04-19 05:26:50,388 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-19 00:27:10] 2025-04-19 05:26:50,388 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-19 00:27:10] 2025-04-19 05:26:50,388 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-19 00:27:10] 2025-04-19 05:26:50,389 | INFO     | fitting pss+swap vs Time
[2025-04-19 00:27:10] 2025-04-19 05:26:50,389 | INFO     | sum of square deviations: 7553630.0
[2025-04-19 00:27:10] 2025-04-19 05:26:50,389 | INFO     | sum of deviations: 1106058832.000001
[2025-04-19 00:27:10] 2025-04-19 05:26:50,389 | INFO     | mean x: 1745039370.0
[2025-04-19 00:27:10] 2025-04-19 05:26:50,389 | INFO     | mean y: 2885484.275862069
[2025-04-19 00:27:10] 2025-04-19 05:26:50,389 | INFO     | -- intersect: -255518791825.3379
[2025-04-19 00:27:10] 2025-04-19 05:26:50,389 | INFO     | intersect: -255518791825.3379
[2025-04-19 00:27:10] 2025-04-19 05:26:50,389 | INFO     | chi2: 0.6860825223876726
[2025-04-19 00:27:10] 2025-04-19 05:26:50,389 | INFO     | -- intersect: -255518791825.3379
[2025-04-19 00:27:10] 2025-04-19 05:26:50,389 | INFO     | current memory leak: 146.43 B/s (using 29 data points, chi2=0.69)
[2025-04-19 00:27:10] 2025-04-19 05:26:50,389 | INFO     | ..............................
[2025-04-19 00:27:10] 2025-04-19 05:26:50,389 | INFO     | . Timing measurements:
[2025-04-19 00:27:10] 2025-04-19 05:26:50,389 | INFO     | . get job = 0 s
[2025-04-19 00:27:10] 2025-04-19 05:26:50,390 | INFO     | . initial setup = 2 s
[2025-04-19 00:27:10] 2025-04-19 05:26:50,390 | INFO     | . payload setup = 2 s
[2025-04-19 00:27:10] 2025-04-19 05:26:50,390 | INFO     | . stage-in = 0 s
[2025-04-19 00:27:10] 2025-04-19 05:26:50,390 | INFO     | . payload execution = 2191 s
[2025-04-19 00:27:10] 2025-04-19 05:26:50,390 | INFO     | . stage-out = 0 s
[2025-04-19 00:27:10] 2025-04-19 05:26:50,390 | INFO     | . log creation = 0 s
[2025-04-19 00:27:10] 2025-04-19 05:26:50,390 | INFO     | ..............................
[2025-04-19 00:27:10] 2025-04-19 05:26:50,432 | INFO     | 
[2025-04-19 00:27:10] 2025-04-19 05:26:50,432 | INFO     | job summary report
[2025-04-19 00:27:10] 2025-04-19 05:26:50,432 | INFO     | --------------------------------------------------
[2025-04-19 00:27:10] 2025-04-19 05:26:50,432 | INFO     | PanDA job id: 6605895958
[2025-04-19 00:27:10] 2025-04-19 05:26:50,432 | INFO     | task id: 44075483
[2025-04-19 00:27:10] 2025-04-19 05:26:50,432 | INFO     | errors: (none)
[2025-04-19 00:27:10] 2025-04-19 05:26:50,432 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-19 00:27:10] 2025-04-19 05:26:50,432 | INFO     | pilot state: finished 
[2025-04-19 00:27:10] 2025-04-19 05:26:50,432 | INFO     | transexitcode: 0
[2025-04-19 00:27:10] 2025-04-19 05:26:50,432 | INFO     | exeerrorcode: 0
[2025-04-19 00:27:10] 2025-04-19 05:26:50,432 | INFO     | exeerrordiag: 
[2025-04-19 00:27:10] 2025-04-19 05:26:50,432 | INFO     | exitcode: 0
[2025-04-19 00:27:10] 2025-04-19 05:26:50,432 | INFO     | exitmsg: OK
[2025-04-19 00:27:10] 2025-04-19 05:26:50,432 | INFO     | cpuconsumptiontime: 20142 s
[2025-04-19 00:27:10] 2025-04-19 05:26:50,432 | INFO     | nevents: 400
[2025-04-19 00:27:10] 2025-04-19 05:26:50,432 | INFO     | neventsw: 0
[2025-04-19 00:27:10] 2025-04-19 05:26:50,432 | INFO     | pid: 16860
[2025-04-19 00:27:10] 2025-04-19 05:26:50,432 | INFO     | pgrp: 16860
[2025-04-19 00:27:10] 2025-04-19 05:26:50,432 | INFO     | corecount: 12
[2025-04-19 00:27:10] 2025-04-19 05:26:50,432 | INFO     | event service: False
[2025-04-19 00:27:10] 2025-04-19 05:26:50,433 | INFO     | sizes: {0: 2426824, 2: 2427030, 11: 2427058, 2196: 2452065, 2198: 2461008, 2200: 2461064, 2203: 2461362}
[2025-04-19 00:27:10] 2025-04-19 05:26:50,433 | INFO     | --------------------------------------------------
[2025-04-19 00:27:10] 2025-04-19 05:26:50,433 | INFO     | 
[2025-04-19 00:27:10] 2025-04-19 05:26:50,433 | INFO     | executing command: ls -lF /var/lib/boinc/slots/18
[2025-04-19 00:27:10] 2025-04-19 05:26:50,444 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-19 00:27:10] 2025-04-19 05:26:50,444 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-19 00:27:10] 2025-04-19 05:26:50,444 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-19 00:27:10] 2025-04-19 05:26:50,444 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-19 00:27:10] 2025-04-19 05:26:50,444 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-19 00:27:10] 2025-04-19 05:26:50,444 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-19 00:27:10] 2025-04-19 05:26:50,444 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-19 00:27:10] 2025-04-19 05:26:50,444 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-19 00:27:10] 2025-04-19 05:26:50,444 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-19 00:27:10] 2025-04-19 05:26:50,444 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-19 00:27:10] 2025-04-19 05:26:50,444 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-19 00:27:10] 2025-04-19 05:26:50,444 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-19 00:27:10] 2025-04-19 05:26:50,444 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-19 00:27:10] 2025-04-19 05:26:50,444 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-19 00:27:10] 2025-04-19 05:26:50,445 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-19 00:27:10] 2025-04-19 05:26:50,445 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-19 00:27:10] 2025-04-19 05:26:50,445 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-19 00:27:10] 2025-04-19 05:26:50,445 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-19 00:27:10] 2025-04-19 05:26:50,445 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-19 00:27:10] 2025-04-19 05:26:50,445 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-19 00:27:10] 2025-04-19 05:26:50,445 | INFO     | job 6605895958 has completed (purged errors)
[2025-04-19 00:27:10] 2025-04-19 05:26:50,445 | INFO     | overall cleanup function is called
[2025-04-19 00:27:10] 2025-04-19 05:26:51,452 | INFO     | --- collectZombieJob: --- 10, [16860]
[2025-04-19 00:27:10] 2025-04-19 05:26:51,452 | INFO     | zombie collector waiting for pid 16860
[2025-04-19 00:27:10] 2025-04-19 05:26:51,452 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-19 00:27:10] 2025-04-19 05:26:51,452 | INFO     | collected zombie processes
[2025-04-19 00:27:10] 2025-04-19 05:26:51,452 | INFO     | will attempt to kill all subprocesses of pid=16860
[2025-04-19 00:27:10] 2025-04-19 05:26:51,500 | INFO     | process IDs to be killed: [16860] (in reverse order)
[2025-04-19 00:27:10] 2025-04-19 05:26:51,526 | WARNING  | found no corresponding commands to process id(s)
[2025-04-19 00:27:10] 2025-04-19 05:26:51,527 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-19 00:27:10] 2025-04-19 05:26:51,529 | INFO     | did not find any defunct processes belonging to 16860
[2025-04-19 00:27:10] 2025-04-19 05:26:51,530 | INFO     | did not find any defunct processes belonging to 16860
[2025-04-19 00:27:10] 2025-04-19 05:26:51,530 | INFO     | ready for new job
[2025-04-19 00:27:10] 2025-04-19 05:26:51,530 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-19 00:27:10] 2025-04-19 05:26:51,531 | INFO     | **************************************
[2025-04-19 00:27:10] 2025-04-19 05:26:51,531 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-19 00:27:10] 2025-04-19 05:26:51,531 | INFO     | **************************************
[2025-04-19 00:27:10] 2025-04-19 05:26:51,531 | INFO     | 
[2025-04-19 00:27:10] 2025-04-19 05:26:51,532 | INFO     | architecture information:
[2025-04-19 00:27:10] 2025-04-19 05:26:51,532 | INFO     | executing command: cat /etc/os-release
[2025-04-19 00:27:10] 2025-04-19 05:26:51,540 | INFO     | cat /etc/os-release:
[2025-04-19 00:27:10] NAME="CentOS Linux"
[2025-04-19 00:27:10] VERSION="7 (Core)"
[2025-04-19 00:27:10] ID="centos"
[2025-04-19 00:27:10] ID_LIKE="rhel fedora"
[2025-04-19 00:27:10] VERSION_ID="7"
[2025-04-19 00:27:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-19 00:27:10] ANSI_COLOR="0;31"
[2025-04-19 00:27:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-19 00:27:10] HOME_URL="https://www.centos.org/"
[2025-04-19 00:27:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-19 00:27:10] 
[2025-04-19 00:27:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-19 00:27:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-19 00:27:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-19 00:27:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-19 00:27:10] 
[2025-04-19 00:27:10] 2025-04-19 05:26:51,540 | INFO     | **************************************
[2025-04-19 00:27:10] 2025-04-19 05:26:52,043 | INFO     | executing command: df -mP /var/lib/boinc/slots/18
[2025-04-19 00:27:10] 2025-04-19 05:26:52,053 | INFO     | sufficient remaining disk space (3889487151104 B)
[2025-04-19 00:27:10] 2025-04-19 05:26:52,054 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-19 00:27:10] 2025-04-19 05:26:52,054 | INFO     | current server update state: UPDATING_FINAL
[2025-04-19 00:27:10] 2025-04-19 05:26:52,054 | INFO     | update_server=False
[2025-04-19 00:27:10] 2025-04-19 05:26:52,054 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-19 00:27:10] 2025-04-19 05:26:52,054 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-19 00:27:10] 2025-04-19 05:26:52,054 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-19 00:27:10] 2025-04-19 05:26:52,054 | INFO     | aborting loop
[2025-04-19 00:27:10] 2025-04-19 05:26:52,269 | INFO     | found 0 job(s) in 20 queues
[2025-04-19 00:27:10] 2025-04-19 05:26:52,270 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-19 00:27:10] 2025-04-19 05:26:52,270 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-19 00:27:10] 2025-04-19 05:26:52,973 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-19 00:27:10] 2025-04-19 05:26:52,989 | INFO     | all payload control threads have been joined
[2025-04-19 00:27:10] 2025-04-19 05:26:53,028 | INFO     | all job control threads have been joined
[2025-04-19 00:27:10] 2025-04-19 05:26:53,057 | INFO     | [job] job monitor thread has finished
[2025-04-19 00:27:10] 2025-04-19 05:26:53,058 | INFO     | [job] queue monitor thread has finished
[2025-04-19 00:27:10] 2025-04-19 05:26:53,058 | INFO     | [job] retrieve thread has finished
[2025-04-19 00:27:10] 2025-04-19 05:26:53,061 | INFO     | all data control threads have been joined
[2025-04-19 00:27:10] 2025-04-19 05:26:53,061 | INFO     | [data] copytool_in thread has finished
[2025-04-19 00:27:10] 2025-04-19 05:26:53,308 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-19 00:27:10] 2025-04-19 05:26:53,444 | INFO     | [payload] execute_payloads thread has finished
[2025-04-19 00:27:10] 2025-04-19 05:26:53,985 | INFO     | [job] validate thread has finished
[2025-04-19 00:27:10] 2025-04-19 05:26:53,993 | INFO     | [payload] control thread has finished
[2025-04-19 00:27:10] 2025-04-19 05:26:54,029 | INFO     | [job] control thread has finished
[2025-04-19 00:27:10] 2025-04-19 05:26:54,065 | INFO     | [data] control thread has finished
[2025-04-19 00:27:10] 2025-04-19 05:26:54,097 | INFO     | [payload] failed_post thread has finished
[2025-04-19 00:27:10] 2025-04-19 05:26:54,097 | INFO     | [payload] validate_post thread has finished
[2025-04-19 00:27:10] 2025-04-19 05:26:54,253 | INFO     | [job] create_data_payload thread has finished
[2025-04-19 00:27:10] 2025-04-19 05:26:54,502 | INFO     | [payload] validate_pre thread has finished
[2025-04-19 00:27:10] 2025-04-19 05:26:55,309 | INFO     | [data] copytool_out thread has finished
[2025-04-19 00:27:10] 2025-04-19 05:26:56,977 | INFO     | [data] queue_monitor thread has finished
[2025-04-19 00:27:10] 2025-04-19 05:27:03,057 | INFO     | job.realtimelogging is not enabled
[2025-04-19 00:27:10] 2025-04-19 05:27:04,061 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-19 00:27:10] 2025-04-19 05:27:05,737 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140008322053952)>', '<ExcThread(monitor, started 140007964645120)>']
[2025-04-19 00:27:10] 2025-04-19 05:27:06,326 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-19 00:27:10] 2025-04-19 05:27:06,326 | INFO     | [monitor] control thread has ended
[2025-04-19 00:27:10] 2025-04-19 05:27:10,763 | INFO     | all workflow threads have been joined
[2025-04-19 00:27:10] 2025-04-19 05:27:10,763 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-19 00:27:10] 2025-04-19 05:27:10,763 | INFO     | traces error code: 0
[2025-04-19 00:27:10] 2025-04-19 05:27:10,763 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-19 00:27:10] 2025-04-19 05:27:10,820 [wrapper] ==== pilot stdout END ====
[2025-04-19 00:27:10] 2025-04-19 05:27:10,822 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-19 00:27:10] 2025-04-19 05:27:10,823 [wrapper] pilotpid: 9976
[2025-04-19 00:27:10] 2025-04-19 05:27:10,825 [wrapper] Pilot exit status: 0
[2025-04-19 00:27:10] 2025-04-19 05:27:10,830 [wrapper] pandaids: 6605895958
[2025-04-19 00:27:10] 2025-04-19 05:27:10,846 [wrapper] cleanup supervisor_pilot  9675 9977
[2025-04-19 00:27:10] 2025-04-19 05:27:10,848 [wrapper] Test setup, not cleaning
[2025-04-19 00:27:10] 2025-04-19 05:27:10,849 [wrapper] apfmon messages muted
[2025-04-19 00:27:10] 2025-04-19 05:27:10,851 [wrapper] ==== wrapper stdout END ====
[2025-04-19 00:27:10] 2025-04-19 05:27:10,858 [wrapper] ==== wrapper stderr END ====
[2025-04-19 00:27:10]  *** Error codes and diagnostics ***
[2025-04-19 00:27:10]     "exeErrorCode": 0,
[2025-04-19 00:27:10]     "exeErrorDiag": "",
[2025-04-19 00:27:10]     "pilotErrorCode": 0,
[2025-04-19 00:27:10]     "pilotErrorDiag": "",
[2025-04-19 00:27:10]  *** Listing of results directory ***
[2025-04-19 00:27:10] total 412776
[2025-04-19 00:27:10] -rw-r--r-- 1 boinc boinc      5111 Apr 17 15:32 queuedata.json
[2025-04-19 00:27:10] -rw-r--r-- 1 boinc boinc    495897 Apr 17 15:32 pilot3.tar.gz
[2025-04-19 00:27:10] -rwx------ 1 boinc boinc     37140 Apr 17 15:33 runpilot2-wrapper.sh
[2025-04-19 00:27:10] -rw-r--r-- 1 boinc boinc       100 Apr 18 23:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-19 00:27:10] -rwxr-xr-x 1 boinc boinc      7986 Apr 18 23:49 run_atlas
[2025-04-19 00:27:10] -rw-r--r-- 1 boinc boinc       105 Apr 18 23:49 job.xml
[2025-04-19 00:27:10] -rw-r--r-- 2 boinc boinc     17569 Apr 18 23:49 start_atlas.sh
[2025-04-19 00:27:10] drwxrwx--x 1 boinc boinc        76 Apr 18 23:49 shared
[2025-04-19 00:27:10] -rw-r--r-- 2 boinc boinc    508892 Apr 18 23:49 input.tar.gz
[2025-04-19 00:27:10] -rw-r--r-- 1 boinc boinc     10045 Apr 18 23:49 init_data.xml
[2025-04-19 00:27:10] -rw-r--r-- 2 boinc boinc 225094228 Apr 18 23:49 EVNT.44075481._002346.pool.root.1
[2025-04-19 00:27:10] -rw-r--r-- 1 boinc boinc         0 Apr 18 23:49 boinc_lockfile
[2025-04-19 00:27:10] -rw-r--r-- 1 boinc boinc      2578 Apr 18 23:49 pandaJob.out
[2025-04-19 00:27:10] -rw------- 1 boinc boinc       473 Apr 18 23:49 setup.sh.local
[2025-04-19 00:27:10] -rw------- 1 boinc boinc    991292 Apr 18 23:49 agis_schedconf.cvmfs.json
[2025-04-19 00:27:10] -rw------- 1 boinc boinc   1618536 Apr 18 23:49 agis_ddmendpoints.agis.ALL.json
[2025-04-19 00:27:10] drwx------ 1 boinc boinc       368 Apr 18 23:49 pilot3
[2025-04-19 00:27:10] -rw------- 1 boinc boinc        95 Apr 19 00:26 pilot_heartbeat.json
[2025-04-19 00:27:10] -rw-r--r-- 1 boinc boinc       529 Apr 19 00:26 boinc_task_state.xml
[2025-04-19 00:27:10] -rw------- 1 boinc boinc 192590622 Apr 19 00:26 HITS.44075483._060344.pool.root.1
[2025-04-19 00:27:10] -rw------- 1 boinc boinc      1025 Apr 19 00:26 memory_monitor_summary.json
[2025-04-19 00:27:10] -rw------- 1 boinc boinc    327141 Apr 19 00:26 log.44075483._060344.job.log.tgz.1
[2025-04-19 00:27:10] -rw------- 1 boinc boinc      7685 Apr 19 00:26 heartbeat.json
[2025-04-19 00:27:10] -rw-r--r-- 1 boinc boinc      8192 Apr 19 00:27 boinc_mmap_file
[2025-04-19 00:27:10] -rw-r--r-- 1 boinc boinc        27 Apr 19 00:27 wrapper_checkpoint.txt
[2025-04-19 00:27:10] -rw------- 1 boinc boinc      4428 Apr 19 00:27 pilotlog.txt
[2025-04-19 00:27:10] -rw------- 1 boinc boinc    243513 Apr 19 00:27 log.44075483._060344.job.log.1
[2025-04-19 00:27:10] -rw------- 1 boinc boinc       357 Apr 19 00:27 output.list
[2025-04-19 00:27:10] -rw-r--r-- 1 boinc boinc       620 Apr 19 00:27 runtime_log
[2025-04-19 00:27:10] -rw------- 1 boinc boinc    593920 Apr 19 00:27 result.tar.gz
[2025-04-19 00:27:10] -rw------- 1 boinc boinc       652 Apr 19 00:27 TpMODma6kP7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmtgdLDmIyx0Hm.diag
[2025-04-19 00:27:10] -rw-r--r-- 1 boinc boinc     11496 Apr 19 00:27 runtime_log.err
[2025-04-19 00:27:10] -rw-r--r-- 1 boinc boinc     20954 Apr 19 00:27 stderr.txt
[2025-04-19 00:27:10] HITS file was successfully produced:
[2025-04-19 00:27:10] -rw------- 1 boinc boinc 192590622 Apr 19 00:26 shared/HITS.pool.root.1
[2025-04-19 00:27:10]  *** Contents of shared directory: ***
[2025-04-19 00:27:10] total 409000
[2025-04-19 00:27:10] -rw-r--r-- 2 boinc boinc     17569 Apr 18 23:49 start_atlas.sh
[2025-04-19 00:27:10] -rw-r--r-- 2 boinc boinc    508892 Apr 18 23:49 input.tar.gz
[2025-04-19 00:27:10] -rw-r--r-- 2 boinc boinc 225094228 Apr 18 23:49 ATLAS.root_0
[2025-04-19 00:27:10] -rw------- 1 boinc boinc 192590622 Apr 19 00:26 HITS.pool.root.1
[2025-04-19 00:27:10] -rw------- 1 boinc boinc    593920 Apr 19 00:27 result.tar.gz
00:27:12 (6158): run_atlas exited; CPU time 20150.665847
00:27:12 (6158): called boinc_finish(0)

</stderr_txt>
]]>

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