Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
11:11:04 (1511339): wrapper (7.7.26015): starting
11:11:04 (1511339): wrapper: running run_atlas (--nthreads 3)
[2025-04-18 11:11:04] Arguments: --nthreads 3
[2025-04-18 11:11:04] Threads: 3
[2025-04-18 11:11:04] Checking for CVMFS
[2025-04-18 11:11:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-18 11:11:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-18 11:11:04] Running cvmfs_config stat atlas.cern.ch
[2025-04-18 11:11:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-18 11:11:05] 2.9.2.0 1070177 1471 79904 144995 0 56 18826033 36864001 0 130560 0 1148869 99.992 324147 6835 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-04-18 11:11:05] CVMFS is ok
[2025-04-18 11:11:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-18 11:11:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-18 11:11:05] Further information can be found at the LHC@home message board.
[2025-04-18 11:11:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-18 11:11:05] Checking for apptainer binary...
[2025-04-18 11:11:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-18 11:11:05] Running /usr/bin/apptainer --version
[2025-04-18 11:11:05] apptainer version 1.3.6-6.1
[2025-04-18 11:11:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-18 11:11:05] atlasA091
[2025-04-18 11:11:05] apptainer works
[2025-04-18 11:11:05] Set ATHENA_PROC_NUMBER=3
[2025-04-18 11:11:05] Set ATHENA_CORE_NUMBER=3
[2025-04-18 11:11:05] Starting ATLAS job with PandaID=6605589619
[2025-04-18 11:11:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-18 12:41:13]  *** The last 200 lines of the pilot log: ***
[2025-04-18 12:41:13]  status_code=0
[2025-04-18 12:41:13]  storage_token=
[2025-04-18 12:41:13]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6605589619/log.44075483._057979.job.log.tgz.1
[2025-04-18 12:41:13]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/12/fd/log.44075483._057979.job.log.tgz.1
[2025-04-18 12:41:13]  workdir=None
[2025-04-18 12:41:13] ]
[2025-04-18 12:41:13] 2025-04-18 10:40:52,928 | INFO     | transferring file log.44075483._057979.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6605589619/log.44075483._057979.job.log.tgz.1 to /local/data/boinc/
[2025-04-18 12:41:13] 2025-04-18 10:40:52,928 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6605589619/log.44075483._057979.job.log.tgz.1 /local/data/boinc/slots/0/log.44075483._0579
[2025-04-18 12:41:13] 2025-04-18 10:40:52,942 | INFO     | adding to output.list: log.44075483._057979.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/12/fd/log.44075483._057979.job.log.tg
[2025-04-18 12:41:13] 2025-04-18 10:40:52,943 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-18 12:41:13] 2025-04-18 10:40:52,943 | INFO     | summary of transferred files:
[2025-04-18 12:41:13] 2025-04-18 10:40:52,943 | INFO     |  -- lfn=log.44075483._057979.job.log.tgz.1, status_code=0, status=transferred
[2025-04-18 12:41:13] 2025-04-18 10:40:52,943 | INFO     | stage-out finished correctly
[2025-04-18 12:41:13] 2025-04-18 10:40:53,936 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-18 12:41:13] 2025-04-18 10:40:55,707 | INFO     | job 6605589619 has state=finished
[2025-04-18 12:41:13] 2025-04-18 10:40:55,708 | INFO     | preparing for final server update for job 6605589619 in state='finished'
[2025-04-18 12:41:13] 2025-04-18 10:40:56,157 | WARNING  | process 1521421 can no longer be monitored (due to stat problems) - aborting
[2025-04-18 12:41:13] 2025-04-18 10:40:56,157 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6605589619/memory_monitor_summary.json (trf name=prmon)
[2025-04-18 12:41:13] 2025-04-18 10:40:56,158 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 2573386 B
[2025-04-18 12:41:13] 2025-04-18 10:40:56,158 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15544 B
[2025-04-18 12:41:13] 2025-04-18 10:40:56,158 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-04-18 12:41:13] 2025-04-18 10:40:56,169 | INFO     | sufficient remaining disk space (381638672384 B)
[2025-04-18 12:41:13] 2025-04-18 10:40:56,169 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-04-18 12:41:13] 2025-04-18 10:40:56,169 | INFO     | size of work directory /local/data/boinc/slots/0/PanDA_Pilot-6605589619: 2898569 B (within 2537553920 B limit)
[2025-04-18 12:41:13] 2025-04-18 10:40:56,169 | INFO     | pfn file=/local/data/boinc/slots/0/PanDA_Pilot-6605589619/HITS.44075483._057979.pool.root.1 does not exist (skip from workdir size calculation)
[2025-04-18 12:41:13] 2025-04-18 10:40:56,169 | INFO     | total size of present files: 0 B (workdir size: 2898569 B)
[2025-04-18 12:41:13] 2025-04-18 10:40:56,169 | INFO     | output file size check: skipping output file /local/data/boinc/slots/0/PanDA_Pilot-6605589619/HITS.44075483._057979.pool.root.1 since it does not exist
[2025-04-18 12:41:13] 2025-04-18 10:40:56,206 | INFO     | number of running child processes to parent process 1521421: 1
[2025-04-18 12:41:13] 2025-04-18 10:40:56,206 | INFO     | maximum number of monitored processes: 6
[2025-04-18 12:41:13] 2025-04-18 10:40:56,305 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-04-18 12:41:13] 2025-04-18 10:40:56,305 | INFO     | this job has now completed (state=finished)
[2025-04-18 12:41:13] 2025-04-18 10:40:56,305 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-18 12:41:13] 2025-04-18 10:40:56,305 | INFO     | log transfer has been attempted: DONE
[2025-04-18 12:41:13] 2025-04-18 10:40:56,305 | INFO     | job 6605589619 has finished - writing final server update
[2025-04-18 12:41:13] 2025-04-18 10:40:56,305 | INFO     | total number of processed events: 400 (read)
[2025-04-18 12:41:13] 2025-04-18 10:40:56,306 | INFO     | executing command: lscpu
[2025-04-18 12:41:13] 2025-04-18 10:40:56,323 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-18 12:41:13] 2025-04-18 10:40:58,708 | INFO     | monitor loop #413: job 0:6605589619 is in state 'finished'
[2025-04-18 12:41:13] 2025-04-18 10:40:58,709 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-18 12:41:13] 2025-04-18 10:41:00,198 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-18 12:41:13] 2025-04-18 10:41:00,198 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6605589619/memory_monitor_summary.json (trf name=prmon)
[2025-04-18 12:41:13] 2025-04-18 10:41:00,199 | INFO     | extracted standard info from prmon json
[2025-04-18 12:41:13] 2025-04-18 10:41:00,199 | INFO     | extracted standard memory fields from prmon json
[2025-04-18 12:41:13] 2025-04-18 10:41:00,199 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-18 12:41:13] 2025-04-18 10:41:00,199 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-18 12:41:13] 2025-04-18 10:41:00,199 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-18 12:41:13] 2025-04-18 10:41:00,200 | INFO     | fitting pss+swap vs Time
[2025-04-18 12:41:13] 2025-04-18 10:41:00,200 | INFO     | sum of square deviations: 164735184.3950618
[2025-04-18 12:41:13] 2025-04-18 10:41:00,200 | INFO     | sum of deviations: 10327302170.049383
[2025-04-18 12:41:13] 2025-04-18 10:41:00,200 | INFO     | mean x: 1744970236.0864198
[2025-04-18 12:41:13] 2025-04-18 10:41:00,200 | INFO     | mean y: 2402523.135802469
[2025-04-18 12:41:13] 2025-04-18 10:41:00,200 | INFO     | -- intersect: -109390347859.7452
[2025-04-18 12:41:13] 2025-04-18 10:41:00,200 | INFO     | intersect: -109390347859.7452
[2025-04-18 12:41:13] 2025-04-18 10:41:00,200 | INFO     | chi2: 1.0830169303231676
[2025-04-18 12:41:13] 2025-04-18 10:41:00,200 | INFO     | -- intersect: -109390347859.7452
[2025-04-18 12:41:13] 2025-04-18 10:41:00,200 | INFO     | current memory leak: 62.69 B/s (using 81 data points, chi2=1.08)
[2025-04-18 12:41:13] 2025-04-18 10:41:00,201 | INFO     | ..............................
[2025-04-18 12:41:13] 2025-04-18 10:41:00,201 | INFO     | . Timing measurements:
[2025-04-18 12:41:13] 2025-04-18 10:41:00,201 | INFO     | . get job = 0 s
[2025-04-18 12:41:13] 2025-04-18 10:41:00,201 | INFO     | . initial setup = 1 s
[2025-04-18 12:41:13] 2025-04-18 10:41:00,201 | INFO     | . payload setup = 3 s
[2025-04-18 12:41:13] 2025-04-18 10:41:00,201 | INFO     | . stage-in = 0 s
[2025-04-18 12:41:13] 2025-04-18 10:41:00,201 | INFO     | . payload execution = 5361 s
[2025-04-18 12:41:13] 2025-04-18 10:41:00,201 | INFO     | . stage-out = 0 s
[2025-04-18 12:41:13] 2025-04-18 10:41:00,201 | INFO     | . log creation = 0 s
[2025-04-18 12:41:13] 2025-04-18 10:41:00,201 | INFO     | ..............................
[2025-04-18 12:41:13] 2025-04-18 10:41:00,700 | INFO     | 
[2025-04-18 12:41:13] 2025-04-18 10:41:00,700 | INFO     | job summary report
[2025-04-18 12:41:13] 2025-04-18 10:41:00,700 | INFO     | --------------------------------------------------
[2025-04-18 12:41:13] 2025-04-18 10:41:00,700 | INFO     | PanDA job id: 6605589619
[2025-04-18 12:41:13] 2025-04-18 10:41:00,700 | INFO     | task id: 44075483
[2025-04-18 12:41:13] 2025-04-18 10:41:00,700 | INFO     | errors: (none)
[2025-04-18 12:41:13] 2025-04-18 10:41:00,700 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-18 12:41:13] 2025-04-18 10:41:00,700 | INFO     | pilot state: finished 
[2025-04-18 12:41:13] 2025-04-18 10:41:00,700 | INFO     | transexitcode: 0
[2025-04-18 12:41:13] 2025-04-18 10:41:00,700 | INFO     | exeerrorcode: 0
[2025-04-18 12:41:13] 2025-04-18 10:41:00,700 | INFO     | exeerrordiag: 
[2025-04-18 12:41:13] 2025-04-18 10:41:00,701 | INFO     | exitcode: 0
[2025-04-18 12:41:13] 2025-04-18 10:41:00,701 | INFO     | exitmsg: OK
[2025-04-18 12:41:13] 2025-04-18 10:41:00,701 | INFO     | cpuconsumptiontime: 14098 s
[2025-04-18 12:41:13] 2025-04-18 10:41:00,701 | INFO     | nevents: 400
[2025-04-18 12:41:13] 2025-04-18 10:41:00,701 | INFO     | neventsw: 0
[2025-04-18 12:41:13] 2025-04-18 10:41:00,701 | INFO     | pid: 1521421
[2025-04-18 12:41:13] 2025-04-18 10:41:00,701 | INFO     | pgrp: 1521421
[2025-04-18 12:41:13] 2025-04-18 10:41:00,701 | INFO     | corecount: 3
[2025-04-18 12:41:13] 2025-04-18 10:41:00,701 | INFO     | event service: False
[2025-04-18 12:41:13] 2025-04-18 10:41:00,701 | INFO     | sizes: {0: 2426776, 3: 2426982, 11: 2427010, 5368: 2453558, 5369: 2462505, 5370: 2462561, 5376: 2462887}
[2025-04-18 12:41:13] 2025-04-18 10:41:00,701 | INFO     | --------------------------------------------------
[2025-04-18 12:41:13] 2025-04-18 10:41:00,701 | INFO     | 
[2025-04-18 12:41:13] 2025-04-18 10:41:00,701 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-04-18 12:41:13] 2025-04-18 10:41:00,716 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-18 12:41:13] 2025-04-18 10:41:00,716 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-18 12:41:13] 2025-04-18 10:41:00,716 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-18 12:41:13] 2025-04-18 10:41:00,716 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-18 12:41:13] 2025-04-18 10:41:00,716 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-18 12:41:13] 2025-04-18 10:41:00,716 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-18 12:41:13] 2025-04-18 10:41:00,716 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-18 12:41:13] 2025-04-18 10:41:00,717 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-18 12:41:13] 2025-04-18 10:41:00,717 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-18 12:41:13] 2025-04-18 10:41:00,717 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-18 12:41:13] 2025-04-18 10:41:00,717 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-18 12:41:13] 2025-04-18 10:41:00,717 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-18 12:41:13] 2025-04-18 10:41:00,717 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-18 12:41:13] 2025-04-18 10:41:00,717 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-18 12:41:13] 2025-04-18 10:41:00,717 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-18 12:41:13] 2025-04-18 10:41:00,717 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-18 12:41:13] 2025-04-18 10:41:00,717 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-18 12:41:13] 2025-04-18 10:41:00,717 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-18 12:41:13] 2025-04-18 10:41:00,717 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-18 12:41:13] 2025-04-18 10:41:00,717 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-18 12:41:13] 2025-04-18 10:41:00,717 | INFO     | job 6605589619 has completed (purged errors)
[2025-04-18 12:41:13] 2025-04-18 10:41:00,717 | INFO     | overall cleanup function is called
[2025-04-18 12:41:13] 2025-04-18 10:41:01,724 | INFO     | --- collectZombieJob: --- 10, [1521421]
[2025-04-18 12:41:13] 2025-04-18 10:41:01,724 | INFO     | zombie collector waiting for pid 1521421
[2025-04-18 12:41:13] 2025-04-18 10:41:01,724 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-18 12:41:13] 2025-04-18 10:41:01,724 | INFO     | collected zombie processes
[2025-04-18 12:41:13] 2025-04-18 10:41:01,724 | INFO     | will attempt to kill all subprocesses of pid=1521421
[2025-04-18 12:41:13] 2025-04-18 10:41:01,766 | INFO     | process IDs to be killed: [1521421] (in reverse order)
[2025-04-18 12:41:13] 2025-04-18 10:41:01,791 | WARNING  | found no corresponding commands to process id(s)
[2025-04-18 12:41:13] 2025-04-18 10:41:01,792 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-18 12:41:13] 2025-04-18 10:41:01,793 | INFO     | did not find any defunct processes belonging to 1521421
[2025-04-18 12:41:13] 2025-04-18 10:41:01,794 | INFO     | did not find any defunct processes belonging to 1521421
[2025-04-18 12:41:13] 2025-04-18 10:41:01,794 | INFO     | ready for new job
[2025-04-18 12:41:13] 2025-04-18 10:41:01,794 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-18 12:41:13] 2025-04-18 10:41:01,795 | INFO     | **************************************
[2025-04-18 12:41:13] 2025-04-18 10:41:01,795 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-18 12:41:13] 2025-04-18 10:41:01,795 | INFO     | **************************************
[2025-04-18 12:41:13] 2025-04-18 10:41:01,795 | INFO     | 
[2025-04-18 12:41:13] 2025-04-18 10:41:01,795 | INFO     | architecture information:
[2025-04-18 12:41:13] 2025-04-18 10:41:01,795 | INFO     | executing command: cat /etc/os-release
[2025-04-18 12:41:13] 2025-04-18 10:41:01,805 | INFO     | cat /etc/os-release:
[2025-04-18 12:41:13] NAME="CentOS Linux"
[2025-04-18 12:41:13] VERSION="7 (Core)"
[2025-04-18 12:41:13] ID="centos"
[2025-04-18 12:41:13] ID_LIKE="rhel fedora"
[2025-04-18 12:41:13] VERSION_ID="7"
[2025-04-18 12:41:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-18 12:41:13] ANSI_COLOR="0;31"
[2025-04-18 12:41:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-18 12:41:13] HOME_URL="https://www.centos.org/"
[2025-04-18 12:41:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-18 12:41:13] 
[2025-04-18 12:41:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-18 12:41:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-18 12:41:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-18 12:41:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-18 12:41:13] 
[2025-04-18 12:41:13] 2025-04-18 10:41:01,805 | INFO     | **************************************
[2025-04-18 12:41:13] 2025-04-18 10:41:02,308 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-04-18 12:41:13] 2025-04-18 10:41:02,321 | INFO     | sufficient remaining disk space (381635526656 B)
[2025-04-18 12:41:13] 2025-04-18 10:41:02,321 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-18 12:41:13] 2025-04-18 10:41:02,321 | INFO     | current server update state: UPDATING_FINAL
[2025-04-18 12:41:13] 2025-04-18 10:41:02,321 | INFO     | update_server=False
[2025-04-18 12:41:13] 2025-04-18 10:41:02,321 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-18 12:41:13] 2025-04-18 10:41:02,321 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-18 12:41:13] 2025-04-18 10:41:02,322 | INFO     | aborting loop
[2025-04-18 12:41:13] 2025-04-18 10:41:02,322 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-18 12:41:13] 2025-04-18 10:41:02,322 | INFO     | found 0 job(s) in 20 queues
[2025-04-18 12:41:13] 2025-04-18 10:41:02,322 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-18 12:41:13] 2025-04-18 10:41:02,322 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-18 12:41:13] 2025-04-18 10:41:02,673 | INFO     | all data control threads have been joined
[2025-04-18 12:41:13] 2025-04-18 10:41:02,950 | INFO     | all job control threads have been joined
[2025-04-18 12:41:13] 2025-04-18 10:41:03,083 | INFO     | all payload control threads have been joined
[2025-04-18 12:41:13] 2025-04-18 10:41:03,327 | INFO     | [job] retrieve thread has finished
[2025-04-18 12:41:13] 2025-04-18 10:41:03,327 | INFO     | [job] job monitor thread has finished
[2025-04-18 12:41:13] 2025-04-18 10:41:03,489 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-18 12:41:13] 2025-04-18 10:41:03,494 | INFO     | [payload] execute_payloads thread has finished
[2025-04-18 12:41:13] 2025-04-18 10:41:03,679 | INFO     | [data] control thread has finished
[2025-04-18 12:41:13] 2025-04-18 10:41:03,956 | INFO     | [job] control thread has finished
[2025-04-18 12:41:13] 2025-04-18 10:41:03,980 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-18 12:41:13] 2025-04-18 10:41:04,048 | INFO     | [payload] failed_post thread has finished
[2025-04-18 12:41:13] 2025-04-18 10:41:04,088 | INFO     | [payload] control thread has finished
[2025-04-18 12:41:13] 2025-04-18 10:41:04,379 | INFO     | [data] copytool_in thread has finished
[2025-04-18 12:41:13] 2025-04-18 10:41:04,479 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-18 12:41:13] 2025-04-18 10:41:04,624 | INFO     | [payload] validate_post thread has finished
[2025-04-18 12:41:13] 2025-04-18 10:41:04,635 | INFO     | [job] validate thread has finished
[2025-04-18 12:41:13] 2025-04-18 10:41:04,767 | INFO     | [job] create_data_payload thread has finished
[2025-04-18 12:41:13] 2025-04-18 10:41:04,795 | INFO     | [payload] validate_pre thread has finished
[2025-04-18 12:41:13] 2025-04-18 10:41:05,245 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-18 12:41:13] 2025-04-18 10:41:05,495 | INFO     | [data] copytool_out thread has finished
[2025-04-18 12:41:13] 2025-04-18 10:41:06,251 | INFO     | [job] queue monitor thread has finished
[2025-04-18 12:41:13] 2025-04-18 10:41:08,487 | INFO     | [data] queue_monitor thread has finished
[2025-04-18 12:41:13] 2025-04-18 10:41:08,591 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139959409080128)>', '<ExcThread(monitor, started 139958471874304)>']
[2025-04-18 12:41:13] 2025-04-18 10:41:09,359 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-18 12:41:13] 2025-04-18 10:41:09,360 | INFO     | [monitor] control thread has ended
[2025-04-18 12:41:13] 2025-04-18 10:41:09,521 [wrapper] supervise_pilot (15 min periods counter: 7)
[2025-04-18 12:41:13] 2025-04-18 10:41:13,617 | INFO     | all workflow threads have been joined
[2025-04-18 12:41:13] 2025-04-18 10:41:13,618 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-18 12:41:13] 2025-04-18 10:41:13,618 | INFO     | traces error code: 0
[2025-04-18 12:41:13] 2025-04-18 10:41:13,618 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-18 12:41:13] 2025-04-18 10:41:13,668 [wrapper] ==== pilot stdout END ====
[2025-04-18 12:41:13] 2025-04-18 10:41:13,670 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-18 12:41:13] 2025-04-18 10:41:13,673 [wrapper] pilotpid: 1514987
[2025-04-18 12:41:13] 2025-04-18 10:41:13,675 [wrapper] Pilot exit status: 0
[2025-04-18 12:41:13] 2025-04-18 10:41:13,683 [wrapper] pandaids: 6605589619
[2025-04-18 12:41:13] 2025-04-18 10:41:13,700 [wrapper] cleanup supervisor_pilot 1536374 1514988
[2025-04-18 12:41:13] 2025-04-18 10:41:13,702 [wrapper] Test setup, not cleaning
[2025-04-18 12:41:13] 2025-04-18 10:41:13,704 [wrapper] apfmon messages muted
[2025-04-18 12:41:13] 2025-04-18 10:41:13,707 [wrapper] ==== wrapper stdout END ====
[2025-04-18 12:41:13] 2025-04-18 10:41:13,709 [wrapper] ==== wrapper stderr END ====
[2025-04-18 12:41:13]  *** Error codes and diagnostics ***
[2025-04-18 12:41:13]     "exeErrorCode": 0,
[2025-04-18 12:41:13]     "exeErrorDiag": "",
[2025-04-18 12:41:13]     "pilotErrorCode": 0,
[2025-04-18 12:41:13]     "pilotErrorDiag": "",
[2025-04-18 12:41:13]  *** Listing of results directory ***
[2025-04-18 12:41:13] total 417344
[2025-04-18 12:41:13] -rw-r--r-- 1 boinc boinc    495897 Apr 17 18:07 pilot3.tar.gz
[2025-04-18 12:41:13] -rwx------ 1 boinc boinc     37140 Apr 17 18:26 runpilot2-wrapper.sh
[2025-04-18 12:41:13] -rw-r--r-- 1 boinc boinc      5111 Apr 17 18:26 queuedata.json
[2025-04-18 12:41:13] -rw-r--r-- 1 boinc boinc       100 Apr 18 11:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-18 12:41:13] -rwxr-xr-x 1 boinc boinc      7986 Apr 18 11:11 run_atlas
[2025-04-18 12:41:13] -rw-r--r-- 1 boinc boinc       105 Apr 18 11:11 job.xml
[2025-04-18 12:41:13] -rw-r--r-- 2 boinc boinc 226894650 Apr 18 11:11 EVNT.44075481._002255.pool.root.1
[2025-04-18 12:41:13] -rw-r--r-- 1 boinc boinc      6927 Apr 18 11:11 init_data.xml
[2025-04-18 12:41:13] drwxrwx--x 2 boinc boinc      4096 Apr 18 11:11 shared
[2025-04-18 12:41:13] -rw-r--r-- 2 boinc boinc    508887 Apr 18 11:11 input.tar.gz
[2025-04-18 12:41:13] -rw-r--r-- 2 boinc boinc     17569 Apr 18 11:11 start_atlas.sh
[2025-04-18 12:41:13] -rw-r--r-- 1 boinc boinc         0 Apr 18 11:11 boinc_lockfile
[2025-04-18 12:41:13] -rw-r--r-- 1 boinc boinc      2578 Apr 18 11:11 pandaJob.out
[2025-04-18 12:41:13] -rw------- 1 boinc boinc       424 Apr 18 11:11 setup.sh.local
[2025-04-18 12:41:13] -rw------- 1 boinc boinc    990242 Apr 18 11:11 agis_schedconf.cvmfs.json
[2025-04-18 12:41:13] -rw------- 1 boinc boinc   1618536 Apr 18 11:11 agis_ddmendpoints.agis.ALL.json
[2025-04-18 12:41:13] drwx------ 4 boinc boinc      4096 Apr 18 11:11 pilot3
[2025-04-18 12:41:13] -rw------- 1 boinc boinc 195076816 Apr 18 12:40 HITS.44075483._057979.pool.root.1
[2025-04-18 12:41:13] -rw------- 1 boinc boinc        95 Apr 18 12:40 pilot_heartbeat.json
[2025-04-18 12:41:13] -rw-r--r-- 1 boinc boinc       529 Apr 18 12:40 boinc_task_state.xml
[2025-04-18 12:41:13] -rw------- 1 boinc boinc      1016 Apr 18 12:40 memory_monitor_summary.json
[2025-04-18 12:41:13] -rw------- 1 boinc boinc    244700 Apr 18 12:40 log.44075483._057979.job.log.tgz.1
[2025-04-18 12:41:13] -rw------- 1 boinc boinc      7652 Apr 18 12:41 heartbeat.json
[2025-04-18 12:41:13] -rw-r--r-- 1 boinc boinc      8192 Apr 18 12:41 boinc_mmap_file
[2025-04-18 12:41:13] -rw-r--r-- 1 boinc boinc        27 Apr 18 12:41 wrapper_checkpoint.txt
[2025-04-18 12:41:13] -rw------- 1 boinc boinc      4480 Apr 18 12:41 pilotlog.txt
[2025-04-18 12:41:13] -rw------- 1 boinc boinc    518637 Apr 18 12:41 log.44075483._057979.job.log.1
[2025-04-18 12:41:13] -rw------- 1 boinc boinc       357 Apr 18 12:41 output.list
[2025-04-18 12:41:13] -rw-r--r-- 1 boinc boinc       620 Apr 18 12:41 runtime_log
[2025-04-18 12:41:13] -rw------- 1 boinc boinc    778240 Apr 18 12:41 result.tar.gz
[2025-04-18 12:41:13] -rw-r--r-- 1 boinc boinc     11114 Apr 18 12:41 runtime_log.err
[2025-04-18 12:41:13] -rw------- 1 boinc boinc       661 Apr 18 12:41 kdSKDmZFhP7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmHB4KDmoQMtVo.diag
[2025-04-18 12:41:13] -rw-r--r-- 1 boinc boinc     22291 Apr 18 12:41 stderr.txt
[2025-04-18 12:41:13] HITS file was successfully produced:
[2025-04-18 12:41:13] -rw------- 1 boinc boinc 195076816 Apr 18 12:40 shared/HITS.pool.root.1
[2025-04-18 12:41:13]  *** Contents of shared directory: ***
[2025-04-18 12:41:13] total 413376
[2025-04-18 12:41:13] -rw-r--r-- 2 boinc boinc 226894650 Apr 18 11:11 ATLAS.root_0
[2025-04-18 12:41:13] -rw-r--r-- 2 boinc boinc    508887 Apr 18 11:11 input.tar.gz
[2025-04-18 12:41:13] -rw-r--r-- 2 boinc boinc     17569 Apr 18 11:11 start_atlas.sh
[2025-04-18 12:41:13] -rw------- 1 boinc boinc 195076816 Apr 18 12:40 HITS.pool.root.1
[2025-04-18 12:41:13] -rw------- 1 boinc boinc    778240 Apr 18 12:41 result.tar.gz
12:41:14 (1511339): run_atlas exited; CPU time 14116.811015
12:41:14 (1511339): called boinc_finish(0)

</stderr_txt>
]]>

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