Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-04-18 01:15:54 (7436): Detected: vboxwrapper 26206
2025-04-18 01:15:54 (7436): Detected: BOINC client v8.0.2
2025-04-18 01:15:55 (7436): Detected: VirtualBox VboxManage Interface (Version: 7.1.6)
2025-04-18 01:15:55 (7436): Successfully copied 'init_data.xml' to the shared directory.
2025-04-18 01:15:55 (7436): Create VM. (boinc_438c8a4fde2b9599, slot#1)
2025-04-18 01:15:56 (7436): Setting Memory Size for VM. (4800MB)
2025-04-18 01:15:56 (7436): Setting CPU Count for VM. (8)
2025-04-18 01:15:56 (7436): Setting Chipset Options for VM.
2025-04-18 01:15:57 (7436): Setting Graphics Controller Options for VM.
2025-04-18 01:15:57 (7436): Setting Boot Options for VM.
2025-04-18 01:15:57 (7436): Setting Network Configuration for NAT.
2025-04-18 01:15:57 (7436): Enabling VM Network Access.
2025-04-18 01:15:58 (7436): Disabling USB Support for VM.
2025-04-18 01:15:58 (7436): Disabling COM Port Support for VM.
2025-04-18 01:15:58 (7436): Disabling LPT Port Support for VM.
2025-04-18 01:15:59 (7436): Disabling Audio Support for VM.
2025-04-18 01:15:59 (7436): Disabling Clipboard Support for VM.
2025-04-18 01:15:59 (7436): Disabling Drag and Drop Support for VM.
2025-04-18 01:15:59 (7436): Adding storage controller(s) to VM.
2025-04-18 01:16:00 (7436): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-04-18 01:16:01 (7436): Adding VirtualBox Guest Additions to VM.
2025-04-18 01:16:01 (7436): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-04-18 01:16:01 (7436): forwarding host port 50894 to guest port 80
2025-04-18 01:16:01 (7436): Enabling remote desktop for VM.
2025-04-18 01:16:02 (7436): Required extension pack not installed, remote desktop not enabled.
2025-04-18 01:16:02 (7436): Enabling shared directory for VM.
2025-04-18 01:16:02 (7436): Starting VM using VBoxManage interface. (boinc_438c8a4fde2b9599, slot#1)
2025-04-18 01:16:10 (7436): Successfully started VM. (PID = '18692')
2025-04-18 01:16:10 (7436): Reporting VM Process ID to BOINC.
2025-04-18 01:16:10 (7436): Guest Log: BIOS: VirtualBox 7.1.6
2025-04-18 01:16:10 (7436): Guest Log: CPUID EDX: 0x178bfbff
2025-04-18 01:16:10 (7436): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-04-18 01:16:10 (7436): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-04-18 01:16:10 (7436): VM state change detected. (old = 'poweredoff', new = 'running')
2025-04-18 01:16:10 (7436): Detected: Web Application Enabled (http://localhost:50894)
2025-04-18 01:16:11 (7436): VM state change detected. (old = 'running', new = 'paused')
2025-04-18 01:17:04 (7436): Preference change detected
2025-04-18 01:17:04 (7436): Setting CPU throttle for VM. (100%)
2025-04-18 01:17:04 (7436): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-18 01:17:05 (7436): VM state change detected. (old = 'paused', new = 'running')
2025-04-18 01:17:06 (7436): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-04-18 01:17:06 (7436): Guest Log: BIOS: Booting from Hard Disk...
2025-04-18 01:17:08 (7436): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-04-18 01:17:08 (7436): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-04-18 01:17:08 (7436): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-04-18 01:17:08 (7436): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-04-18 01:17:08 (7436): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-04-18 01:17:08 (7436): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-04-18 01:17:08 (7436): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-04-18 01:17:08 (7436): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-04-18 01:17:08 (7436): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-04-18 01:17:08 (7436): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-04-18 01:17:08 (7436): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-04-18 01:17:08 (7436): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-04-18 01:17:08 (7436): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-04-18 01:17:08 (7436): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-04-18 01:17:08 (7436): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-04-18 01:17:08 (7436): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-04-18 01:17:08 (7436): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-04-18 01:17:08 (7436): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-04-18 01:17:08 (7436): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-04-18 01:17:08 (7436): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-04-18 01:17:08 (7436): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-04-18 01:17:08 (7436): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-04-18 01:17:08 (7436): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-04-18 01:17:08 (7436): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-04-18 01:17:08 (7436): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-04-18 01:17:08 (7436): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-04-18 01:17:08 (7436): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-04-18 01:17:08 (7436): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-04-18 01:17:08 (7436): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-04-18 01:17:08 (7436): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-04-18 01:17:08 (7436): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-04-18 01:17:08 (7436): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-04-18 01:17:15 (7436): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-04-18 01:17:15 (7436): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-04-18 01:17:18 (7436): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-04-18 01:17:18 (7436): Guest Log: 00:00:00.000103 main     Log opened 2025-04-18T01:16:22.145469000Z
2025-04-18 01:17:18 (7436): Guest Log: 00:00:00.000270 main     OS Product: Linux
2025-04-18 01:17:18 (7436): Guest Log: 00:00:00.000298 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-04-18 01:17:18 (7436): Guest Log: 00:00:00.000315 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-04-18 01:17:18 (7436): Guest Log: 00:00:00.000331 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-04-18 01:17:18 (7436): Guest Log: 00:00:00.000331 main     Process ID: 1042
2025-04-18 01:17:18 (7436): Guest Log: 00:00:00.000331 main     Package type: LINUX_64BITS_GENERIC
2025-04-18 01:17:18 (7436): Guest Log: 00:00:00.000926 main     5.2.32 r132073 started. Verbose level = 0
2025-04-18 01:17:18 (7436): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-04-18 01:17:18 (7436): Guest Log: [INFO] Mounting shared directory
2025-04-18 01:17:18 (7436): Guest Log: [INFO] Checking for init_data.xml
2025-04-18 01:17:27 (7436): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-04-18 01:17:27 (7436): Guest Log: [INFO] Detected branch: prod
2025-04-18 01:17:27 (7436): Guest Log: This is the prod version of the ATLAS job wrapper
2025-04-18 01:17:27 (7436): Guest Log: Copying input files
2025-04-18 01:17:28 (7436): Guest Log: 00:00:10.004094 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 134 871 882 000ns (GuestNow=1 744 931 847 275 261 000 ns GuestLast=1 744 938 982 147 143 000 ns fSetTimeLastLoop=true )
2025-04-18 01:17:28 (7436): Guest Log: Copied input files into RunAtlas.
2025-04-18 01:17:28 (7436): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-04-18 01:17:28 (7436): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-04-18 01:17:28 (7436): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-04-18 01:17:28 (7436): Guest Log: Further information can be found at the LHC@home message board.
2025-04-18 01:17:37 (7436): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-04-18 01:17:38 (7436): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-04-18 01:17:38 (7436): Guest Log: 2.6.3.0 1652 0 32368 144982 4 1 3119946 4096000 0 65024 0 0 n/a 1171 2132 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-04-18 01:17:38 (7436): Guest Log: copied the webapp to /var/www
2025-04-18 01:17:38 (7436): Guest Log: ATHENA_PROC_NUMBER=8
2025-04-18 01:17:38 (7436): Guest Log: ATHENA_CORE_NUMBER=8
2025-04-18 01:17:38 (7436): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-04-18 01:17:38 (7436): Guest Log:  *** Starting ATLAS job. (PandaID=6596320980 taskID=44075164) ***
2025-04-18 01:28:02 (7436): VM state change detected. (old = 'running', new = 'paused')
2025-04-18 05:24:11 (7436): Preference change detected
2025-04-18 05:24:11 (7436): Setting CPU throttle for VM. (100%)
2025-04-18 05:24:11 (7436): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-18 05:24:12 (7436): VM state change detected. (old = 'paused', new = 'running')
2025-04-18 05:24:17 (7436): Guest Log: 00:10:50.268188 timesync vgsvcTimeSyncWorker: Radical host time change: 14 179 821 000 000ns (HostNow=1 744 946 657 357 000 000 ns HostLast=1 744 932 477 536 000 000 ns)
2025-04-18 05:24:27 (7436): Guest Log: 00:11:00.268793 timesync vgsvcTimeSyncWorker: Radical guest time change: 14 179 819 534 000ns (GuestNow=1 744 946 667 358 114 000 ns GuestLast=1 744 932 487 538 580 000 ns fSetTimeLastLoop=true )
2025-04-18 06:31:06 (7436): Guest Log:  *** Job finished ***
2025-04-18 06:31:06 (7436): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-18 06:31:06 (7436): Guest Log: 2025-04-18 04:30:51,162 | INFO     | [data] queue_monitor thread has finished
2025-04-18 06:31:06 (7436): Guest Log: 2025-04-18 04:30:56,818 | INFO     | job.realtimelogging is not enabled
2025-04-18 06:31:06 (7436): Guest Log: 2025-04-18 04:30:57,982 | INFO     | [payload] run_realtimelog thread has finished
2025-04-18 06:31:06 (7436): Guest Log: 2025-04-18 04:30:58,482 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140199088547648)>', '<ExcThread(monitor, started 140198637713152)>']
2025-04-18 06:31:06 (7436): Guest Log: 2025-04-18 04:30:59,420 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-18 06:31:06 (7436): Guest Log: 2025-04-18 04:30:59,420 | INFO     | [monitor] control thread has ended
2025-04-18 06:31:06 (7436): Guest Log: 2025-04-18 04:31:03,493 | INFO     | all workflow threads have been joined
2025-04-18 06:31:06 (7436): Guest Log: 2025-04-18 04:31:03,494 | INFO     | end of generic workflow (traces error code: 0)
2025-04-18 06:31:06 (7436): Guest Log: 2025-04-18 04:31:03,494 | INFO     | traces error code: 0
2025-04-18 06:31:06 (7436): Guest Log: 2025-04-18 04:31:03,494 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-18 06:31:06 (7436): Guest Log: 2025-04-18 04:31:03,579 [wrapper] ==== pilot stdout END ====
2025-04-18 06:31:06 (7436): Guest Log: 2025-04-18 04:31:03,582 [wrapper] ==== wrapper stdout RESUME ====
2025-04-18 06:31:06 (7436): Guest Log: 2025-04-18 04:31:03,585 [wrapper] pilotpid: 6030
2025-04-18 06:31:06 (7436): Guest Log: 2025-04-18 04:31:03,588 [wrapper] Pilot exit status: 0
2025-04-18 06:31:06 (7436): Guest Log: 2025-04-18 04:31:04,051 [wrapper] pandaids: 6596320980
2025-04-18 06:31:06 (7436): Guest Log: 2025-04-18 04:31:04,075 [wrapper] cleanup supervisor_pilot 25821 6031
2025-04-18 06:31:06 (7436): Guest Log: 2025-04-18 04:31:04,078 [wrapper] Test setup, not cleaning
2025-04-18 06:31:06 (7436): Guest Log: 2025-04-18 04:31:04,082 [wrapper] apfmon messages muted
2025-04-18 06:31:06 (7436): Guest Log: 2025-04-18 04:31:04,085 [wrapper] ==== wrapper stdout END ====
2025-04-18 06:31:06 (7436): Guest Log: 2025-04-18 04:31:04,088 [wrapper] ==== wrapper stderr END ====
2025-04-18 06:31:06 (7436): Guest Log:  *** Error codes and diagnostics ***
2025-04-18 06:31:06 (7436): Guest Log:     "exeErrorCode": 0,
2025-04-18 06:31:06 (7436): Guest Log:     "exeErrorDiag": "",
2025-04-18 06:31:06 (7436): Guest Log:     "pilotErrorCode": 0,
2025-04-18 06:31:06 (7436): Guest Log:     "pilotErrorDiag": "",
2025-04-18 06:31:06 (7436): Guest Log:  *** Listing of results directory ***
2025-04-18 06:31:06 (7436): Guest Log: total 193928
2025-04-18 06:31:06 (7436): Guest Log: -rw-r--r--. 1 atlas atlas    495897 Apr 10 15:55 pilot3.tar.gz
2025-04-18 06:31:06 (7436): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Apr 10 16:11 queuedata.json
2025-04-18 06:31:06 (7436): Guest Log: -rwx------. 1 atlas atlas     37140 Apr 10 16:11 runpilot2-wrapper.sh
2025-04-18 06:31:06 (7436): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 Apr 17 23:17 start_atlas.sh
2025-04-18 06:31:06 (7436): Guest Log: -rwxr-xr-x. 1 atlas atlas    508884 Apr 17 23:17 input.tar.gz
2025-04-18 06:31:06 (7436): Guest Log: -rwxr-xr-x. 1 atlas atlas      8963 Apr 17 23:17 init_data.xml
2025-04-18 06:31:06 (7436): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr 17 23:17 EVNT.44075162._001128.pool.root.1 -> /data/./ATLAS.root_0
2025-04-18 06:31:06 (7436): Guest Log: -rw-r--r--. 1 atlas atlas      2550 Apr 17 23:17 pandaJob.out
2025-04-18 06:31:06 (7436): Guest Log: -rw-------. 1 atlas atlas       424 Apr 17 23:17 setup.sh.local
2025-04-18 06:31:06 (7436): Guest Log: -rw-------. 1 atlas atlas    990266 Apr 17 23:18 agis_schedconf.cvmfs.json
2025-04-18 06:31:06 (7436): Guest Log: drwx------. 4 atlas atlas      4096 Apr 17 23:18 pilot3
2025-04-18 06:31:06 (7436): Guest Log: -rw-------. 1 atlas atlas        98 Apr 18 04:29 pilot_heartbeat.json
2025-04-18 06:31:06 (7436): Guest Log: -rw-------. 1 atlas atlas 193347369 Apr 18 04:30 HITS.44075164._028451.pool.root.1
2025-04-18 06:31:06 (7436): Guest Log: -rw-------. 1 atlas atlas      1026 Apr 18 04:30 memory_monitor_summary.json
2025-04-18 06:31:06 (7436): Guest Log: -rw-------. 1 atlas atlas   1618536 Apr 18 04:30 agis_ddmendpoints.agis.ALL.json
2025-04-18 06:31:06 (7436): Guest Log: -rw-------. 1 atlas atlas    299272 Apr 18 04:30 log.44075164._028451.job.log.tgz.1
2025-04-18 06:31:06 (7436): Guest Log: -rw-------. 1 atlas atlas      7679 Apr 18 04:30 heartbeat.json
2025-04-18 06:31:06 (7436): Guest Log: -rw-------. 1 atlas atlas      4487 Apr 18 04:31 pilotlog.txt
2025-04-18 06:31:06 (7436): Guest Log: -rw-------. 1 atlas atlas    424353 Apr 18 04:31 log.44075164._028451.job.log.1
2025-04-18 06:31:06 (7436): Guest Log: -rw-------. 1 atlas atlas       357 Apr 18 04:31 output.list
2025-04-18 06:31:06 (7436): Guest Log: -rw-r--r--. 1 atlas atlas       620 Apr 18 04:31 runtime_log
2025-04-18 06:31:06 (7436): Guest Log: -rw-------. 1 atlas atlas    737280 Apr 18 04:31 result.tar.gz
2025-04-18 06:31:06 (7436): Guest Log: -rw-r--r--. 1 atlas atlas     10914 Apr 18 04:31 runtime_log.err
2025-04-18 06:31:06 (7436): Guest Log: -rw-------. 1 atlas atlas       649 Apr 18 04:31 29YMDmGg9M7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmqywKDmM0tdDn.diag
2025-04-18 06:31:06 (7436): Guest Log: Looking for outputfile HITS.44075164._028451.pool.root.1
2025-04-18 06:31:06 (7436): Guest Log: HITS file was successfully produced
2025-04-18 06:31:06 (7436): Guest Log: -rw-------. 1 atlas atlas 193347369 Apr 18 04:30 /home/atlas/RunAtlas/HITS.44075164._028451.pool.root.1
2025-04-18 06:31:08 (7436): Guest Log: Successfully finished the ATLAS job!
2025-04-18 06:31:08 (7436): Guest Log: Copying the results back to the shared directory!
2025-04-18 06:31:08 (7436): Guest Log:  *** Contents of shared directory: ***
2025-04-18 06:31:08 (7436): Guest Log: total 405016
2025-04-18 06:31:08 (7436): Guest Log: -rwxrwxrwx. 1 root root 220102800 Apr 17 23:15 ATLAS.root_0
2025-04-18 06:31:08 (7436): Guest Log: -rwxrwxrwx. 1 root root 193347369 Apr 18  2025 HITS.pool.root.1
2025-04-18 06:31:08 (7436): Guest Log: -rwxrwxrwx. 1 root root      8963 Apr 17 23:15 init_data.xml
2025-04-18 06:31:08 (7436): Guest Log: -rwxrwxrwx. 1 root root    508884 Apr 17 23:15 input.tar.gz
2025-04-18 06:31:08 (7436): Guest Log: -rwxrwxrwx. 1 root root    737280 Apr 18  2025 result.tar.gz
2025-04-18 06:31:08 (7436): Guest Log: -rwxrwxrwx. 1 root root     17569 Apr 17 23:15 start_atlas.sh
2025-04-18 06:31:08 (7436): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-18 06:31:08 (7436): VM Completion File Detected.
2025-04-18 06:31:08 (7436): Powering off VM.
2025-04-18 06:31:09 (7436): Successfully stopped VM.
2025-04-18 06:31:09 (7436): Deregistering VM. (boinc_438c8a4fde2b9599, slot#1)
2025-04-18 06:31:09 (7436): Removing network bandwidth throttle group from VM.
2025-04-18 06:31:09 (7436): Removing VM from VirtualBox.
06:31:15 (7436): called boinc_finish(0)

</stderr_txt>
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