Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-04-18 16:52:29 (10664): Detected: vboxwrapper 26206
2025-04-18 16:52:29 (10664): Detected: BOINC client v8.0.2
2025-04-18 16:52:30 (10664): Detected: VirtualBox VboxManage Interface (Version: 7.1.4)
2025-04-18 16:52:30 (10664): Successfully copied 'init_data.xml' to the shared directory.
2025-04-18 16:52:31 (10664): Create VM. (boinc_02100c1a2aeedcb8, slot#0)
2025-04-18 16:52:31 (10664): Setting Memory Size for VM. (4800MB)
2025-04-18 16:52:31 (10664): Setting CPU Count for VM. (8)
2025-04-18 16:52:32 (10664): Setting Chipset Options for VM.
2025-04-18 16:52:32 (10664): Setting Graphics Controller Options for VM.
2025-04-18 16:52:32 (10664): Setting Boot Options for VM.
2025-04-18 16:52:32 (10664): Setting Network Configuration for NAT.
2025-04-18 16:52:33 (10664): Enabling VM Network Access.
2025-04-18 16:52:33 (10664): Disabling USB Support for VM.
2025-04-18 16:52:33 (10664): Disabling COM Port Support for VM.
2025-04-18 16:52:34 (10664): Disabling LPT Port Support for VM.
2025-04-18 16:52:34 (10664): Disabling Audio Support for VM.
2025-04-18 16:52:34 (10664): Disabling Clipboard Support for VM.
2025-04-18 16:52:34 (10664): Disabling Drag and Drop Support for VM.
2025-04-18 16:52:35 (10664): Adding storage controller(s) to VM.
2025-04-18 16:52:35 (10664): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-04-18 16:52:38 (10664): Adding VirtualBox Guest Additions to VM.
2025-04-18 16:52:38 (10664): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-04-18 16:52:38 (10664): forwarding host port 50837 to guest port 80
2025-04-18 16:52:39 (10664): Enabling remote desktop for VM.
2025-04-18 16:52:39 (10664): Required extension pack not installed, remote desktop not enabled.
2025-04-18 16:52:39 (10664): Enabling shared directory for VM.
2025-04-18 16:52:39 (10664): Starting VM using VBoxManage interface. (boinc_02100c1a2aeedcb8, slot#0)
2025-04-18 16:52:45 (10664): Successfully started VM. (PID = '9708')
2025-04-18 16:52:45 (10664): Reporting VM Process ID to BOINC.
2025-04-18 16:52:45 (10664): Guest Log: BIOS: VirtualBox 7.1.4
2025-04-18 16:52:45 (10664): Guest Log: CPUID EDX: 0x178bfbff
2025-04-18 16:52:45 (10664): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-04-18 16:52:45 (10664): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-04-18 16:52:45 (10664): VM state change detected. (old = 'poweredoff', new = 'running')
2025-04-18 16:52:45 (10664): Detected: Web Application Enabled (http://localhost:50837)
2025-04-18 16:52:45 (10664): Preference change detected
2025-04-18 16:52:45 (10664): Setting CPU throttle for VM. (100%)
2025-04-18 16:52:46 (10664): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-18 16:52:47 (10664): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-04-18 16:52:47 (10664): Guest Log: BIOS: Booting from Hard Disk...
2025-04-18 16:52:50 (10664): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-04-18 16:52:50 (10664): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-04-18 16:52:50 (10664): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-04-18 16:52:50 (10664): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-04-18 16:52:50 (10664): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-04-18 16:52:50 (10664): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-04-18 16:52:50 (10664): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-04-18 16:52:50 (10664): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-04-18 16:52:50 (10664): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-04-18 16:52:50 (10664): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-04-18 16:52:50 (10664): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-04-18 16:52:50 (10664): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-04-18 16:52:50 (10664): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-04-18 16:52:50 (10664): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-04-18 16:52:50 (10664): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-04-18 16:52:50 (10664): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-04-18 16:52:50 (10664): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-04-18 16:52:50 (10664): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-04-18 16:52:50 (10664): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-04-18 16:52:50 (10664): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-04-18 16:52:50 (10664): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-04-18 16:52:50 (10664): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-04-18 16:52:50 (10664): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-04-18 16:52:50 (10664): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-04-18 16:52:50 (10664): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-04-18 16:52:50 (10664): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-04-18 16:52:50 (10664): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-04-18 16:52:50 (10664): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-04-18 16:52:50 (10664): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-04-18 16:52:50 (10664): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-04-18 16:52:50 (10664): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-04-18 16:52:50 (10664): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-04-18 16:53:03 (10664): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-04-18 16:53:03 (10664): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-04-18 16:53:20 (10664): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-04-18 16:53:20 (10664): Guest Log: 00:00:00.000251 main     Log opened 2025-04-18T16:53:19.025788000Z
2025-04-18 16:53:20 (10664): Guest Log: 00:00:00.000519 main     OS Product: Linux
2025-04-18 16:53:20 (10664): Guest Log: 00:00:00.000629 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-04-18 16:53:20 (10664): Guest Log: 00:00:00.000729 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-04-18 16:53:20 (10664): Guest Log: 00:00:00.000899 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-04-18 16:53:20 (10664): Guest Log: 00:00:00.000902 main     Process ID: 1379
2025-04-18 16:53:20 (10664): Guest Log: 00:00:00.000903 main     Package type: LINUX_64BITS_GENERIC
2025-04-18 16:53:20 (10664): Guest Log: 00:00:00.004817 main     5.2.32 r132073 started. Verbose level = 0
2025-04-18 16:53:21 (10664): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-04-18 16:53:21 (10664): Guest Log: [INFO] Mounting shared directory
2025-04-18 16:53:21 (10664): Guest Log: [INFO] Checking for init_data.xml
2025-04-18 16:53:30 (10664): Guest Log: 00:00:10.009154 timesync vgsvcTimeSyncWorker: Radical guest time change: -28 788 500 582 000ns (GuestNow=1 744 966 410 532 544 000 ns GuestLast=1 744 995 199 033 126 000 ns fSetTimeLastLoop=true )
2025-04-18 16:53:35 (10664): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-04-18 16:53:35 (10664): Guest Log: [INFO] Detected branch: prod
2025-04-18 16:53:35 (10664): Guest Log: This is the prod version of the ATLAS job wrapper
2025-04-18 16:53:35 (10664): Guest Log: Copying input files
2025-04-18 16:53:36 (10664): Guest Log: Copied input files into RunAtlas.
2025-04-18 16:53:36 (10664): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-04-18 16:53:36 (10664): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-04-18 16:53:36 (10664): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-04-18 16:53:36 (10664): Guest Log: Further information can be found at the LHC@home message board.
2025-04-18 16:53:51 (10664): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-04-18 16:53:52 (10664): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-04-18 16:53:52 (10664): Guest Log: 2.6.3.0 1658 0 32188 144995 4 1 3117322 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-04-18 16:53:55 (10664): Guest Log: copied the webapp to /var/www
2025-04-18 16:53:55 (10664): Guest Log: ATHENA_PROC_NUMBER=8
2025-04-18 16:53:55 (10664): Guest Log: ATHENA_CORE_NUMBER=8
2025-04-18 16:54:01 (10664): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-04-18 16:54:01 (10664): Guest Log:  *** Starting ATLAS job. (PandaID=6605829915 taskID=44075483) ***
2025-04-18 17:34:03 (10664): Guest Log:  *** Job finished ***
2025-04-18 17:34:03 (10664): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-18 17:34:03 (10664): Guest Log: 2025-04-18 09:33:53,107 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
2025-04-18 17:34:03 (10664): Guest Log: 2025-04-18 09:33:54,108 | INFO     | [job] queue monitor thread has finished
2025-04-18 17:34:03 (10664): Guest Log: 2025-04-18 09:33:54,814 | INFO     | [data] queue_monitor thread has finished
2025-04-18 17:34:03 (10664): Guest Log: 2025-04-18 09:33:56,266 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140583609390912)>', '<ExcThread(monitor, started 140583154718464)>']
2025-04-18 17:34:03 (10664): Guest Log: 2025-04-18 09:33:57,188 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-18 17:34:03 (10664): Guest Log: 2025-04-18 09:33:57,188 | INFO     | [monitor] control thread has ended
2025-04-18 17:34:03 (10664): Guest Log: 2025-04-18 09:34:01,272 | INFO     | all workflow threads have been joined
2025-04-18 17:34:03 (10664): Guest Log: 2025-04-18 09:34:01,272 | INFO     | end of generic workflow (traces error code: 0)
2025-04-18 17:34:03 (10664): Guest Log: 2025-04-18 09:34:01,272 | INFO     | traces error code: 0
2025-04-18 17:34:03 (10664): Guest Log: 2025-04-18 09:34:01,272 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-18 17:34:03 (10664): Guest Log: 2025-04-18 09:34:01,333 [wrapper] ==== pilot stdout END ====
2025-04-18 17:34:03 (10664): Guest Log: 2025-04-18 09:34:01,337 [wrapper] ==== wrapper stdout RESUME ====
2025-04-18 17:34:03 (10664): Guest Log: 2025-04-18 09:34:01,341 [wrapper] pilotpid: 6035
2025-04-18 17:34:03 (10664): Guest Log: 2025-04-18 09:34:01,345 [wrapper] Pilot exit status: 0
2025-04-18 17:34:03 (10664): Guest Log: 2025-04-18 09:34:02,317 [wrapper] pandaids: 6605829915
2025-04-18 17:34:03 (10664): Guest Log: 2025-04-18 09:34:02,350 [wrapper] cleanup supervisor_pilot 19272 6036
2025-04-18 17:34:03 (10664): Guest Log: 2025-04-18 09:34:02,357 [wrapper] Test setup, not cleaning
2025-04-18 17:34:03 (10664): Guest Log: 2025-04-18 09:34:02,360 [wrapper] apfmon messages muted
2025-04-18 17:34:03 (10664): Guest Log: 2025-04-18 09:34:02,363 [wrapper] ==== wrapper stdout END ====
2025-04-18 17:34:03 (10664): Guest Log: 2025-04-18 09:34:02,366 [wrapper] ==== wrapper stderr END ====
2025-04-18 17:34:03 (10664): Guest Log:  *** Error codes and diagnostics ***
2025-04-18 17:34:03 (10664): Guest Log:     "exeErrorCode": 65,
2025-04-18 17:34:03 (10664): Guest Log:     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1); Logfile error in log.EVNTtoHITS: \"GeoModelSvc                                                      FATAL in sysInitialize(): standard std::exception is caught\"",
2025-04-18 17:34:03 (10664): Guest Log:     "pilotErrorCode": 1305,
2025-04-18 17:34:03 (10664): Guest Log:     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1); Logfile error in log.EVNTtoHITS: \"GeoModelSvc                                                      FATAL in sysInitia",
2025-04-18 17:34:03 (10664): Guest Log:  *** Listing of results directory ***
2025-04-18 17:34:03 (10664): Guest Log: total 4312
2025-04-18 17:34:03 (10664): Guest Log: -rw-r--r--. 1 atlas atlas  495897 Apr 17 19:05 pilot3.tar.gz
2025-04-18 17:34:03 (10664): Guest Log: -rwx------. 1 atlas atlas   37140 Apr 17 19:26 runpilot2-wrapper.sh
2025-04-18 17:34:03 (10664): Guest Log: -rw-r--r--. 1 atlas atlas    5111 Apr 17 19:26 queuedata.json
2025-04-18 17:34:03 (10664): Guest Log: -rwxr-xr-x. 1 atlas atlas   12292 Apr 18 08:53 init_data.xml
2025-04-18 17:34:03 (10664): Guest Log: -rwxr-xr-x. 1 atlas atlas  508893 Apr 18 08:53 input.tar.gz
2025-04-18 17:34:03 (10664): Guest Log: -rwxr-xr-x. 1 atlas atlas   17569 Apr 18 08:53 start_atlas.sh
2025-04-18 17:34:03 (10664): Guest Log: lrwxrwxrwx. 1 atlas atlas      20 Apr 18 08:53 EVNT.44075481._002324.pool.root.1 -> /data/./ATLAS.root_0
2025-04-18 17:34:03 (10664): Guest Log: -rw-r--r--. 1 atlas atlas    2578 Apr 18 08:54 pandaJob.out
2025-04-18 17:34:03 (10664): Guest Log: -rw-------. 1 atlas atlas     424 Apr 18 08:54 setup.sh.local
2025-04-18 17:34:03 (10664): Guest Log: -rw-------. 1 atlas atlas  990242 Apr 18 08:55 agis_schedconf.cvmfs.json
2025-04-18 17:34:03 (10664): Guest Log: -rw-------. 1 atlas atlas 1618536 Apr 18 08:55 agis_ddmendpoints.agis.ALL.json
2025-04-18 17:34:03 (10664): Guest Log: drwx------. 4 atlas atlas    4096 Apr 18 08:56 pilot3
2025-04-18 17:34:03 (10664): Guest Log: -rw-------. 1 atlas atlas    1023 Apr 18 09:31 memory_monitor_summary.json
2025-04-18 17:34:03 (10664): Guest Log: -rw-------. 1 atlas atlas   61692 Apr 18 09:31 log.44075483._059776.job.log.tgz.1
2025-04-18 17:34:03 (10664): Guest Log: -rw-------. 1 atlas atlas      95 Apr 18 09:33 pilot_heartbeat.json
2025-04-18 17:34:03 (10664): Guest Log: -rw-------. 1 atlas atlas   10595 Apr 18 09:33 heartbeat.json
2025-04-18 17:34:03 (10664): Guest Log: -rw-------. 1 atlas atlas    4536 Apr 18 09:34 pilotlog.txt
2025-04-18 17:34:03 (10664): Guest Log: -rw-------. 1 atlas atlas  243382 Apr 18 09:34 log.44075483._059776.job.log.1
2025-04-18 17:34:03 (10664): Guest Log: -rw-------. 1 atlas atlas     188 Apr 18 09:34 output.list
2025-04-18 17:34:03 (10664): Guest Log: -rw-r--r--. 1 atlas atlas     620 Apr 18 09:34 runtime_log
2025-04-18 17:34:03 (10664): Guest Log: -rw-------. 1 atlas atlas  327680 Apr 18 09:34 result.tar.gz
2025-04-18 17:34:03 (10664): Guest Log: -rw-r--r--. 1 atlas atlas   10785 Apr 18 09:34 runtime_log.err
2025-04-18 17:34:03 (10664): Guest Log: -rw-------. 1 atlas atlas     645 Apr 18 09:34 IziMDmo3jP7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmGcdLDmnPWr2m.diag
2025-04-18 17:34:03 (10664): Guest Log: Looking for outputfile HITS.44075483._059776.pool.root.1
2025-04-18 17:34:03 (10664): Guest Log: No HITS file was produced
2025-04-18 17:34:03 (10664): Guest Log: Successfully finished the ATLAS job!
2025-04-18 17:34:03 (10664): Guest Log: Copying the results back to the shared directory!
2025-04-18 17:34:03 (10664): Guest Log:  *** Contents of shared directory: ***
2025-04-18 17:34:03 (10664): Guest Log: total 219528
2025-04-18 17:34:03 (10664): Guest Log: -rwxrwxrwx. 1 root root 223918014 Apr 18 08:52 ATLAS.root_0
2025-04-18 17:34:03 (10664): Guest Log: -rwxrwxrwx. 1 root root     12292 Apr 18 08:52 init_data.xml
2025-04-18 17:34:03 (10664): Guest Log: -rwxrwxrwx. 1 root root    508893 Apr 17 23:18 input.tar.gz
2025-04-18 17:34:03 (10664): Guest Log: -rwxrwxrwx. 1 root root    327680 Apr 18 09:34 result.tar.gz
2025-04-18 17:34:03 (10664): Guest Log: -rwxrwxrwx. 1 root root     17569 Apr 17 23:18 start_atlas.sh
2025-04-18 17:34:03 (10664): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-18 17:34:03 (10664): VM Completion File Detected.
2025-04-18 17:34:03 (10664): Powering off VM.
2025-04-18 17:34:04 (10664): Successfully stopped VM.
2025-04-18 17:34:04 (10664): Deregistering VM. (boinc_02100c1a2aeedcb8, slot#0)
2025-04-18 17:34:04 (10664): Removing network bandwidth throttle group from VM.
2025-04-18 17:34:04 (10664): Removing VM from VirtualBox.
17:34:10 (10664): called boinc_finish(0)

</stderr_txt>
]]>

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