Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-04-17 19:20:22 (7972): Detected: vboxwrapper 26206
2025-04-17 19:20:22 (7972): Detected: BOINC client v8.0.2
2025-04-17 19:20:22 (7972): Detected: VirtualBox VboxManage Interface (Version: 7.1.4)
2025-04-17 19:20:22 (7972): Successfully copied 'init_data.xml' to the shared directory.
2025-04-17 19:20:23 (7972): Create VM. (boinc_23b485ca9b4d468c, slot#2)
2025-04-17 19:20:23 (7972): Setting Memory Size for VM. (4800MB)
2025-04-17 19:20:24 (7972): Setting CPU Count for VM. (8)
2025-04-17 19:20:24 (7972): Setting Chipset Options for VM.
2025-04-17 19:20:24 (7972): Setting Graphics Controller Options for VM.
2025-04-17 19:20:24 (7972): Setting Boot Options for VM.
2025-04-17 19:20:25 (7972): Setting Network Configuration for NAT.
2025-04-17 19:20:25 (7972): Enabling VM Network Access.
2025-04-17 19:20:25 (7972): Disabling USB Support for VM.
2025-04-17 19:20:25 (7972): Disabling COM Port Support for VM.
2025-04-17 19:20:26 (7972): Disabling LPT Port Support for VM.
2025-04-17 19:20:26 (7972): Disabling Audio Support for VM.
2025-04-17 19:20:26 (7972): Disabling Clipboard Support for VM.
2025-04-17 19:20:27 (7972): Disabling Drag and Drop Support for VM.
2025-04-17 19:20:27 (7972): Adding storage controller(s) to VM.
2025-04-17 19:20:27 (7972): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-04-17 19:20:28 (7972): Adding VirtualBox Guest Additions to VM.
2025-04-17 19:20:28 (7972): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-04-17 19:20:28 (7972): forwarding host port 62867 to guest port 80
2025-04-17 19:20:28 (7972): Enabling remote desktop for VM.
2025-04-17 19:20:29 (7972): Required extension pack not installed, remote desktop not enabled.
2025-04-17 19:20:29 (7972): Enabling shared directory for VM.
2025-04-17 19:20:29 (7972): Starting VM using VBoxManage interface. (boinc_23b485ca9b4d468c, slot#2)
2025-04-17 19:20:35 (7972): Successfully started VM. (PID = '16360')
2025-04-17 19:20:35 (7972): Reporting VM Process ID to BOINC.
2025-04-17 19:20:35 (7972): Guest Log: BIOS: VirtualBox 7.1.4
2025-04-17 19:20:35 (7972): Guest Log: CPUID EDX: 0x178bfbff
2025-04-17 19:20:35 (7972): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-04-17 19:20:35 (7972): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-04-17 19:20:35 (7972): VM state change detected. (old = 'poweredoff', new = 'running')
2025-04-17 19:20:35 (7972): Detected: Web Application Enabled (http://localhost:62867)
2025-04-17 19:20:35 (7972): Preference change detected
2025-04-17 19:20:35 (7972): Setting CPU throttle for VM. (100%)
2025-04-17 19:20:35 (7972): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-17 19:20:37 (7972): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-04-17 19:20:37 (7972): Guest Log: BIOS: Booting from Hard Disk...
2025-04-17 19:20:40 (7972): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-04-17 19:20:40 (7972): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-04-17 19:20:40 (7972): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-04-17 19:20:40 (7972): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-04-17 19:20:40 (7972): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-04-17 19:20:40 (7972): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-04-17 19:20:40 (7972): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-04-17 19:20:40 (7972): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-04-17 19:20:40 (7972): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-04-17 19:20:40 (7972): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-04-17 19:20:40 (7972): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-04-17 19:20:40 (7972): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-04-17 19:20:40 (7972): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-04-17 19:20:40 (7972): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-04-17 19:20:40 (7972): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-04-17 19:20:40 (7972): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-04-17 19:20:40 (7972): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-04-17 19:20:40 (7972): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-04-17 19:20:40 (7972): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-04-17 19:20:40 (7972): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-04-17 19:20:40 (7972): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-04-17 19:20:40 (7972): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-04-17 19:20:40 (7972): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-04-17 19:20:40 (7972): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-04-17 19:20:40 (7972): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-04-17 19:20:40 (7972): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-04-17 19:20:40 (7972): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-04-17 19:20:40 (7972): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-04-17 19:20:40 (7972): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-04-17 19:20:40 (7972): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-04-17 19:20:40 (7972): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-04-17 19:20:40 (7972): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-04-17 19:20:45 (7972): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-04-17 19:20:45 (7972): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-04-17 19:20:51 (7972): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-04-17 19:20:51 (7972): Guest Log: 00:00:00.000309 main     Log opened 2025-04-17T19:20:48.929496000Z
2025-04-17 19:20:51 (7972): Guest Log: 00:00:00.000528 main     OS Product: Linux
2025-04-17 19:20:51 (7972): Guest Log: 00:00:00.000637 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-04-17 19:20:51 (7972): Guest Log: 00:00:00.000692 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-04-17 19:20:51 (7972): Guest Log: 00:00:00.000746 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-04-17 19:20:51 (7972): Guest Log: 00:00:00.000748 main     Process ID: 1377
2025-04-17 19:20:51 (7972): Guest Log: 00:00:00.000749 main     Package type: LINUX_64BITS_GENERIC
2025-04-17 19:20:51 (7972): Guest Log: 00:00:00.002177 main     5.2.32 r132073 started. Verbose level = 0
2025-04-17 19:20:51 (7972): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-04-17 19:20:51 (7972): Guest Log: [INFO] Mounting shared directory
2025-04-17 19:20:51 (7972): Guest Log: [INFO] Checking for init_data.xml
2025-04-17 19:20:55 (7972): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-04-17 19:20:55 (7972): Guest Log: [INFO] Detected branch: prod
2025-04-17 19:20:55 (7972): Guest Log: This is the prod version of the ATLAS job wrapper
2025-04-17 19:20:55 (7972): Guest Log: Copying input files
2025-04-17 19:20:57 (7972): Guest Log: Copied input files into RunAtlas.
2025-04-17 19:20:57 (7972): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-04-17 19:20:57 (7972): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-04-17 19:20:57 (7972): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-04-17 19:20:57 (7972): Guest Log: Further information can be found at the LHC@home message board.
2025-04-17 19:21:01 (7972): Guest Log: 00:00:10.021460 timesync vgsvcTimeSyncWorker: Radical guest time change: 14 411 546 529 000ns (GuestNow=1 744 932 060 480 524 000 ns GuestLast=1 744 917 648 933 995 000 ns fSetTimeLastLoop=true )
2025-04-17 19:21:05 (7972): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-04-17 19:21:05 (7972): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-04-17 19:21:05 (7972): Guest Log: 2.6.3.0 1656 0 32208 144982 4 1 3117322 4096000 0 65024 0 0 n/a 0 0 http://s1ihep-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-04-17 19:21:06 (7972): Guest Log: copied the webapp to /var/www
2025-04-17 19:21:06 (7972): Guest Log: ATHENA_PROC_NUMBER=8
2025-04-17 19:21:06 (7972): Guest Log: ATHENA_CORE_NUMBER=8
2025-04-17 19:21:06 (7972): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-04-17 19:21:06 (7972): Guest Log:  *** Starting ATLAS job. (PandaID=6605828826 taskID=44075483) ***
2025-04-17 19:32:12 (7972): Guest Log:  *** Job finished ***
2025-04-17 19:32:12 (7972): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-17 19:32:12 (7972): Guest Log: 2025-04-17 23:31:59,280 | INFO     | [data] copytool_out thread has finished
2025-04-17 19:32:12 (7972): Guest Log: 2025-04-17 23:31:59,457 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
2025-04-17 19:32:12 (7972): Guest Log: 2025-04-17 23:32:03,495 | INFO     | [data] queue_monitor thread has finished
2025-04-17 19:32:12 (7972): Guest Log: 2025-04-17 23:32:04,158 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139729423570752)>', '<ExcThread(monitor, started 139728733054720)>']
2025-04-17 19:32:12 (7972): Guest Log: 2025-04-17 23:32:04,305 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-17 19:32:12 (7972): Guest Log: 2025-04-17 23:32:04,305 | INFO     | [monitor] control thread has ended
2025-04-17 19:32:12 (7972): Guest Log: 2025-04-17 23:32:09,192 | INFO     | all workflow threads have been joined
2025-04-17 19:32:12 (7972): Guest Log: 2025-04-17 23:32:09,193 | INFO     | end of generic workflow (traces error code: 0)
2025-04-17 19:32:12 (7972): Guest Log: 2025-04-17 23:32:09,193 | INFO     | traces error code: 0
2025-04-17 19:32:12 (7972): Guest Log: 2025-04-17 23:32:09,193 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-17 19:32:12 (7972): Guest Log: 2025-04-17 23:32:09,278 [wrapper] ==== pilot stdout END ====
2025-04-17 19:32:12 (7972): Guest Log: 2025-04-17 23:32:09,288 [wrapper] ==== wrapper stdout RESUME ====
2025-04-17 19:32:12 (7972): Guest Log: 2025-04-17 23:32:09,295 [wrapper] pilotpid: 6012
2025-04-17 19:32:12 (7972): Guest Log: 2025-04-17 23:32:09,303 [wrapper] Pilot exit status: 0
2025-04-17 19:32:12 (7972): Guest Log: 2025-04-17 23:32:09,385 [wrapper] pandaids: 6605828826
2025-04-17 19:32:12 (7972): Guest Log: 2025-04-17 23:32:09,421 [wrapper] cleanup supervisor_pilot  6018 6013
2025-04-17 19:32:12 (7972): Guest Log: 2025-04-17 23:32:09,427 [wrapper] Test setup, not cleaning
2025-04-17 19:32:12 (7972): Guest Log: 2025-04-17 23:32:09,432 [wrapper] apfmon messages muted
2025-04-17 19:32:12 (7972): Guest Log: 2025-04-17 23:32:09,436 [wrapper] ==== wrapper stdout END ====
2025-04-17 19:32:12 (7972): Guest Log: 2025-04-17 23:32:09,440 [wrapper] ==== wrapper stderr END ====
2025-04-17 19:32:12 (7972): Guest Log:  *** Error codes and diagnostics ***
2025-04-17 19:32:12 (7972): Guest Log:     "exeErrorCode": 65,
2025-04-17 19:32:12 (7972): Guest Log:     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
2025-04-17 19:32:12 (7972): Guest Log:     "pilotErrorCode": 1305,
2025-04-17 19:32:12 (7972): Guest Log:     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
2025-04-17 19:32:12 (7972): Guest Log:  *** Listing of results directory ***
2025-04-17 19:32:12 (7972): Guest Log: total 3964
2025-04-17 19:32:12 (7972): Guest Log: -rw-r--r--. 1 atlas atlas  495897 Apr 17 19:05 pilot3.tar.gz
2025-04-17 19:32:12 (7972): Guest Log: -rwx------. 1 atlas atlas   37140 Apr 17 19:11 runpilot2-wrapper.sh
2025-04-17 19:32:12 (7972): Guest Log: -rw-r--r--. 1 atlas atlas    5111 Apr 17 19:11 queuedata.json
2025-04-17 19:32:12 (7972): Guest Log: -rwxr-xr-x. 1 atlas atlas    9325 Apr 17 23:20 init_data.xml
2025-04-17 19:32:12 (7972): Guest Log: -rwxr-xr-x. 1 atlas atlas  508892 Apr 17 23:20 input.tar.gz
2025-04-17 19:32:12 (7972): Guest Log: -rwxr-xr-x. 1 atlas atlas   17569 Apr 17 23:20 start_atlas.sh
2025-04-17 19:32:12 (7972): Guest Log: lrwxrwxrwx. 1 atlas atlas      20 Apr 17 23:20 EVNT.44075481._002318.pool.root.1 -> /data/./ATLAS.root_0
2025-04-17 19:32:12 (7972): Guest Log: -rw-r--r--. 1 atlas atlas    2579 Apr 17 23:21 pandaJob.out
2025-04-17 19:32:12 (7972): Guest Log: -rw-------. 1 atlas atlas     424 Apr 17 23:21 setup.sh.local
2025-04-17 19:32:12 (7972): Guest Log: -rw-------. 1 atlas atlas  990266 Apr 17 23:21 agis_schedconf.cvmfs.json
2025-04-17 19:32:12 (7972): Guest Log: -rw-------. 1 atlas atlas 1618536 Apr 17 23:21 agis_ddmendpoints.agis.ALL.json
2025-04-17 19:32:12 (7972): Guest Log: drwx------. 4 atlas atlas    4096 Apr 17 23:21 pilot3
2025-04-17 19:32:12 (7972): Guest Log: -rw-------. 1 atlas atlas    1008 Apr 17 23:29 memory_monitor_summary.json
2025-04-17 19:32:12 (7972): Guest Log: -rw-------. 1 atlas atlas   23678 Apr 17 23:29 log.44075483._059638.job.log.tgz.1
2025-04-17 19:32:12 (7972): Guest Log: -rw-------. 1 atlas atlas      95 Apr 17 23:31 pilot_heartbeat.json
2025-04-17 19:32:12 (7972): Guest Log: -rw-------. 1 atlas atlas    8472 Apr 17 23:31 heartbeat.json
2025-04-17 19:32:12 (7972): Guest Log: -rw-------. 1 atlas atlas    4536 Apr 17 23:32 pilotlog.txt
2025-04-17 19:32:12 (7972): Guest Log: -rw-------. 1 atlas atlas  105723 Apr 17 23:32 log.44075483._059638.job.log.1
2025-04-17 19:32:12 (7972): Guest Log: -rw-------. 1 atlas atlas     188 Apr 17 23:32 output.list
2025-04-17 19:32:12 (7972): Guest Log: -rw-r--r--. 1 atlas atlas     620 Apr 17 23:32 runtime_log
2025-04-17 19:32:12 (7972): Guest Log: -rw-------. 1 atlas atlas  153600 Apr 17 23:32 result.tar.gz
2025-04-17 19:32:12 (7972): Guest Log: -rw-r--r--. 1 atlas atlas   10787 Apr 17 23:32 runtime_log.err
2025-04-17 19:32:12 (7972): Guest Log: -rw-------. 1 atlas atlas     644 Apr 17 23:32 JycMDmdpjP7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmPK4KDmSjXwQm.diag
2025-04-17 19:32:12 (7972): Guest Log: Looking for outputfile HITS.44075483._059638.pool.root.1
2025-04-17 19:32:12 (7972): Guest Log: No HITS file was produced
2025-04-17 19:32:12 (7972): Guest Log: Successfully finished the ATLAS job!
2025-04-17 19:32:12 (7972): Guest Log: Copying the results back to the shared directory!
2025-04-17 19:32:13 (7972): Guest Log:  *** Contents of shared directory: ***
2025-04-17 19:32:13 (7972): Guest Log: total 217084
2025-04-17 19:32:13 (7972): Guest Log: -rwxrwxrwx. 1 root root 221592930 Apr 17 23:20 ATLAS.root_0
2025-04-17 19:32:13 (7972): Guest Log: -rwxrwxrwx. 1 root root      9325 Apr 17 23:20 init_data.xml
2025-04-17 19:32:13 (7972): Guest Log: -rwxrwxrwx. 1 root root    508892 Apr 17 23:04 input.tar.gz
2025-04-17 19:32:13 (7972): Guest Log: -rwxrwxrwx. 1 root root    153600 Apr 17 23:32 result.tar.gz
2025-04-17 19:32:13 (7972): Guest Log: -rwxrwxrwx. 1 root root     17569 Apr 17 23:04 start_atlas.sh
2025-04-17 19:32:13 (7972): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-17 19:32:13 (7972): VM Completion File Detected.
2025-04-17 19:32:13 (7972): Powering off VM.
2025-04-17 19:32:14 (7972): Successfully stopped VM.
2025-04-17 19:32:14 (7972): Deregistering VM. (boinc_23b485ca9b4d468c, slot#2)
2025-04-17 19:32:14 (7972): Removing network bandwidth throttle group from VM.
2025-04-17 19:32:14 (7972): Removing VM from VirtualBox.
19:32:19 (7972): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN