Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
17:04:12 (509783): wrapper (7.7.26015): starting
17:04:12 (509783): wrapper: running run_atlas (--nthreads 2)
[2025-04-17 17:04:12] Arguments: --nthreads 2
[2025-04-17 17:04:12] Threads: 2
[2025-04-17 17:04:12] Checking for CVMFS
[2025-04-17 17:04:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-17 17:04:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-17 17:04:12] Running cvmfs_config stat atlas.cern.ch
[2025-04-17 17:04:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-17 17:04:12] 2.12.7.0 3999111 8675 65060 144982 3 187 6076052 6144001 8307 130560 15 42451717 99.993 2249438 405 http://s1sampa-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-04-17 17:04:12] CVMFS is ok
[2025-04-17 17:04:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-17 17:04:12] Small home clusters do not require a local http proxy but it is suggested if
[2025-04-17 17:04:12] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-04-17 17:04:12] Further information can be found at the LHC@home message board.
[2025-04-17 17:04:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-17 17:04:12] Checking for apptainer binary...
[2025-04-17 17:04:12] apptainer is not installed, using version from CVMFS
[2025-04-17 17:04:12] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-17 17:04:12] desktop-b650ef
[2025-04-17 17:04:12] apptainer works
[2025-04-17 17:04:12] Set ATHENA_PROC_NUMBER=2
[2025-04-17 17:04:12] Set ATHENA_CORE_NUMBER=2
[2025-04-17 17:04:12] Starting ATLAS job with PandaID=6605003874
[2025-04-17 17:04:12] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/20 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-17 19:52:28]  *** The last 200 lines of the pilot log: ***
[2025-04-17 19:52:28] 2025-04-18 02:52:09,813 | INFO     | chi2: 4.059081452803217
[2025-04-17 19:52:28] 2025-04-18 02:52:09,813 | INFO     | current chi2=4.059081452803217 (change=0.11758085763935186 %)
[2025-04-17 19:52:28] 2025-04-18 02:52:09,813 | INFO     | right removable region: 159
[2025-04-17 19:52:28] 2025-04-18 02:52:09,813 | INFO     | sum of square deviations: 1270051720.0
[2025-04-17 19:52:28] 2025-04-18 02:52:09,814 | INFO     | sum of deviations: 40743855324.50001
[2025-04-17 19:52:28] 2025-04-18 02:52:09,814 | INFO     | mean x: 1744939840.5
[2025-04-17 19:52:28] 2025-04-18 02:52:09,814 | INFO     | mean y: 2189225.88125
[2025-04-17 19:52:28] 2025-04-18 02:52:09,814 | INFO     | -- intersect: -55976299910.99274
[2025-04-17 19:52:28] 2025-04-18 02:52:09,814 | INFO     | intersect: -55976299910.99274
[2025-04-17 19:52:28] 2025-04-18 02:52:09,814 | INFO     | chi2: 1.6997380839402827
[2025-04-17 19:52:28] 2025-04-18 02:52:09,814 | INFO     | current chi2=1.6997380839402827 (change=58.174292951152836 %)
[2025-04-17 19:52:28] 2025-04-18 02:52:09,814 | INFO     | sum of square deviations: 1154663510.0
[2025-04-17 19:52:28] 2025-04-18 02:52:09,814 | INFO     | sum of deviations: 14733721681.0
[2025-04-17 19:52:28] 2025-04-18 02:52:09,814 | INFO     | mean x: 1744939993.0
[2025-04-17 19:52:28] 2025-04-18 02:52:09,814 | INFO     | mean y: 2223612.5741935484
[2025-04-17 19:52:28] 2025-04-18 02:52:09,814 | INFO     | -- intersect: -22263536051.821964
[2025-04-17 19:52:28] 2025-04-18 02:52:09,814 | INFO     | intersect: -22263536051.821964
[2025-04-17 19:52:28] 2025-04-18 02:52:09,815 | INFO     | chi2: 0.5148540504091058
[2025-04-17 19:52:28] 2025-04-18 02:52:09,815 | INFO     | current chi2=0.5148540504091058 (change=69.70980086440221 %)
[2025-04-17 19:52:28] 2025-04-18 02:52:09,815 | INFO     | sum of square deviations: 1046484737.5
[2025-04-17 19:52:28] 2025-04-18 02:52:09,815 | INFO     | sum of deviations: 3036741985.5
[2025-04-17 19:52:28] 2025-04-18 02:52:09,815 | INFO     | mean x: 1744940145.5
[2025-04-17 19:52:28] 2025-04-18 02:52:09,815 | INFO     | mean y: 2239807.3666666667
[2025-04-17 19:52:28] 2025-04-18 02:52:09,815 | INFO     | -- intersect: -5061315170.686063
[2025-04-17 19:52:28] 2025-04-18 02:52:09,815 | INFO     | intersect: -5061315170.686063
[2025-04-17 19:52:28] 2025-04-18 02:52:09,815 | INFO     | chi2: 0.0005927512647251375
[2025-04-17 19:52:28] 2025-04-18 02:52:09,815 | INFO     | current chi2=0.0005927512647251375 (change=99.88487003952787 %)
[2025-04-17 19:52:28] 2025-04-18 02:52:09,815 | INFO     | sum of square deviations: 945282840.0
[2025-04-17 19:52:28] 2025-04-18 02:52:09,816 | INFO     | sum of deviations: 2405955228.999999
[2025-04-17 19:52:28] 2025-04-18 02:52:09,816 | INFO     | mean x: 1744940298.0
[2025-04-17 19:52:28] 2025-04-18 02:52:09,816 | INFO     | mean y: 2240752.0896551725
[2025-04-17 19:52:28] 2025-04-18 02:52:09,816 | INFO     | -- intersect: -4439020695.400407
[2025-04-17 19:52:28] 2025-04-18 02:52:09,816 | INFO     | intersect: -4439020695.400407
[2025-04-17 19:52:28] 2025-04-18 02:52:09,816 | INFO     | chi2: 0.00025478236493948944
[2025-04-17 19:52:28] 2025-04-18 02:52:09,816 | INFO     | current chi2=0.00025478236493948944 (change=57.016985015184474 %)
[2025-04-17 19:52:28] 2025-04-18 02:52:09,816 | INFO     | sum of square deviations: 850825255.0
[2025-04-17 19:52:28] 2025-04-18 02:52:09,816 | INFO     | sum of deviations: 2138494842.5000002
[2025-04-17 19:52:28] 2025-04-18 02:52:09,816 | INFO     | mean x: 1744940450.5
[2025-04-17 19:52:28] 2025-04-18 02:52:09,816 | INFO     | mean y: 2241184.092857143
[2025-04-17 19:52:28] 2025-04-18 02:52:09,816 | INFO     | -- intersect: -4383554996.65624
[2025-04-17 19:52:28] 2025-04-18 02:52:09,816 | INFO     | intersect: -4383554996.65624
[2025-04-17 19:52:28] 2025-04-18 02:52:09,817 | INFO     | chi2: 0.00025258226587636433
[2025-04-17 19:52:28] 2025-04-18 02:52:09,817 | INFO     | current chi2=0.00025258226587636433 (change=0.8635209362498962 %)
[2025-04-17 19:52:28] 2025-04-18 02:52:09,817 | INFO     | left removable region: 50
[2025-04-17 19:52:28] 2025-04-18 02:52:09,817 | INFO     | sum of square deviations: 401533110.0
[2025-04-17 19:52:28] 2025-04-18 02:52:09,817 | INFO     | sum of deviations: 918938891.9999999
[2025-04-17 19:52:28] 2025-04-18 02:52:09,817 | INFO     | mean x: 1744941030.0
[2025-04-17 19:52:28] 2025-04-18 02:52:09,817 | INFO     | mean y: 2242184.119266055
[2025-04-17 19:52:28] 2025-04-18 02:52:09,817 | INFO     | -- intersect: -3991187340.817142
[2025-04-17 19:52:28] 2025-04-18 02:52:09,817 | INFO     | intersect: -3991187340.817142
[2025-04-17 19:52:28] 2025-04-18 02:52:09,817 | INFO     | chi2: 0.0001772415948622047
[2025-04-17 19:52:28] 2025-04-18 02:52:09,817 | INFO     | -- intersect: -3991187340.817142
[2025-04-17 19:52:28] 2025-04-18 02:52:09,817 | INFO     | current memory leak: 2.29 B/s (using 109 data points, chi2=0.00)
[2025-04-17 19:52:28] 2025-04-18 02:52:09,817 | INFO     | ..............................
[2025-04-17 19:52:28] 2025-04-18 02:52:09,818 | INFO     | . Timing measurements:
[2025-04-17 19:52:28] 2025-04-18 02:52:09,818 | INFO     | . get job = 0 s
[2025-04-17 19:52:28] 2025-04-18 02:52:09,818 | INFO     | . initial setup = 3 s
[2025-04-17 19:52:28] 2025-04-18 02:52:09,818 | INFO     | . payload setup = 5 s
[2025-04-17 19:52:28] 2025-04-18 02:52:09,818 | INFO     | . stage-in = 0 s
[2025-04-17 19:52:28] 2025-04-18 02:52:09,818 | INFO     | . payload execution = 10038 s
[2025-04-17 19:52:28] 2025-04-18 02:52:09,818 | INFO     | . stage-out = 0 s
[2025-04-17 19:52:28] 2025-04-18 02:52:09,818 | INFO     | . log creation = 0 s
[2025-04-17 19:52:28] 2025-04-18 02:52:09,818 | INFO     | ..............................
[2025-04-17 19:52:28] 2025-04-18 02:52:09,867 | INFO     | 
[2025-04-17 19:52:28] 2025-04-18 02:52:09,867 | INFO     | job summary report
[2025-04-17 19:52:28] 2025-04-18 02:52:09,867 | INFO     | --------------------------------------------------
[2025-04-17 19:52:28] 2025-04-18 02:52:09,867 | INFO     | PanDA job id: 6605003874
[2025-04-17 19:52:28] 2025-04-18 02:52:09,867 | INFO     | task id: 44075483
[2025-04-17 19:52:28] 2025-04-18 02:52:09,867 | INFO     | errors: (none)
[2025-04-17 19:52:28] 2025-04-18 02:52:09,867 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-17 19:52:28] 2025-04-18 02:52:09,867 | INFO     | pilot state: finished 
[2025-04-17 19:52:28] 2025-04-18 02:52:09,867 | INFO     | transexitcode: 0
[2025-04-17 19:52:28] 2025-04-18 02:52:09,867 | INFO     | exeerrorcode: 0
[2025-04-17 19:52:28] 2025-04-18 02:52:09,867 | INFO     | exeerrordiag: 
[2025-04-17 19:52:28] 2025-04-18 02:52:09,867 | INFO     | exitcode: 0
[2025-04-17 19:52:28] 2025-04-18 02:52:09,867 | INFO     | exitmsg: OK
[2025-04-17 19:52:28] 2025-04-18 02:52:09,867 | INFO     | cpuconsumptiontime: 18563 s
[2025-04-17 19:52:28] 2025-04-18 02:52:09,867 | INFO     | nevents: 400
[2025-04-17 19:52:28] 2025-04-18 02:52:09,867 | INFO     | neventsw: 0
[2025-04-17 19:52:28] 2025-04-18 02:52:09,867 | INFO     | pid: 520308
[2025-04-17 19:52:28] 2025-04-18 02:52:09,867 | INFO     | pgrp: 520308
[2025-04-17 19:52:28] 2025-04-18 02:52:09,867 | INFO     | corecount: 2
[2025-04-17 19:52:28] 2025-04-18 02:52:09,867 | INFO     | event service: False
[2025-04-17 19:52:28] 2025-04-18 02:52:09,867 | INFO     | sizes: {0: 2426660, 1: 2426859, 4: 2427065, 11: 2427093, 10047: 2455717, 10048: 2464858, 10054: 2464972}
[2025-04-17 19:52:28] 2025-04-18 02:52:09,867 | INFO     | --------------------------------------------------
[2025-04-17 19:52:28] 2025-04-18 02:52:09,867 | INFO     | 
[2025-04-17 19:52:28] 2025-04-18 02:52:09,867 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/20
[2025-04-17 19:52:28] 2025-04-18 02:52:09,917 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-17 19:52:28] 2025-04-18 02:52:09,917 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-17 19:52:28] 2025-04-18 02:52:09,917 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-17 19:52:28] 2025-04-18 02:52:09,917 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-17 19:52:28] 2025-04-18 02:52:09,917 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-17 19:52:28] 2025-04-18 02:52:09,917 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-17 19:52:28] 2025-04-18 02:52:09,917 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-17 19:52:28] 2025-04-18 02:52:09,917 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-17 19:52:28] 2025-04-18 02:52:09,917 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-17 19:52:28] 2025-04-18 02:52:09,917 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-17 19:52:28] 2025-04-18 02:52:09,918 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-17 19:52:28] 2025-04-18 02:52:09,918 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-17 19:52:28] 2025-04-18 02:52:09,918 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-17 19:52:28] 2025-04-18 02:52:09,918 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-17 19:52:28] 2025-04-18 02:52:09,918 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-17 19:52:28] 2025-04-18 02:52:09,918 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-17 19:52:28] 2025-04-18 02:52:09,918 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-17 19:52:28] 2025-04-18 02:52:09,918 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-17 19:52:28] 2025-04-18 02:52:09,918 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-17 19:52:28] 2025-04-18 02:52:09,918 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-17 19:52:28] 2025-04-18 02:52:09,918 | INFO     | job 6605003874 has completed (purged errors)
[2025-04-17 19:52:28] 2025-04-18 02:52:09,918 | INFO     | overall cleanup function is called
[2025-04-17 19:52:28] 2025-04-18 02:52:10,925 | INFO     | --- collectZombieJob: --- 10, [520308]
[2025-04-17 19:52:28] 2025-04-18 02:52:10,925 | INFO     | zombie collector waiting for pid 520308
[2025-04-17 19:52:28] 2025-04-18 02:52:10,925 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-17 19:52:28] 2025-04-18 02:52:10,925 | INFO     | collected zombie processes
[2025-04-17 19:52:28] 2025-04-18 02:52:10,925 | INFO     | will attempt to kill all subprocesses of pid=520308
[2025-04-17 19:52:28] 2025-04-18 02:52:11,036 | INFO     | process IDs to be killed: [520308] (in reverse order)
[2025-04-17 19:52:28] 2025-04-18 02:52:11,115 | WARNING  | found no corresponding commands to process id(s)
[2025-04-17 19:52:28] 2025-04-18 02:52:11,115 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-17 19:52:28] 2025-04-18 02:52:11,119 | INFO     | did not find any defunct processes belonging to 520308
[2025-04-17 19:52:28] 2025-04-18 02:52:11,123 | INFO     | did not find any defunct processes belonging to 520308
[2025-04-17 19:52:28] 2025-04-18 02:52:11,123 | INFO     | ready for new job
[2025-04-17 19:52:28] 2025-04-18 02:52:11,123 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-17 19:52:28] 2025-04-18 02:52:11,124 | INFO     | **************************************
[2025-04-17 19:52:28] 2025-04-18 02:52:11,124 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-17 19:52:28] 2025-04-18 02:52:11,124 | INFO     | **************************************
[2025-04-17 19:52:28] 2025-04-18 02:52:11,124 | INFO     | 
[2025-04-17 19:52:28] 2025-04-18 02:52:11,125 | INFO     | architecture information:
[2025-04-17 19:52:28] 2025-04-18 02:52:11,125 | INFO     | executing command: cat /etc/os-release
[2025-04-17 19:52:28] 2025-04-18 02:52:11,147 | INFO     | cat /etc/os-release:
[2025-04-17 19:52:28] NAME="CentOS Linux"
[2025-04-17 19:52:28] VERSION="7 (Core)"
[2025-04-17 19:52:28] ID="centos"
[2025-04-17 19:52:28] ID_LIKE="rhel fedora"
[2025-04-17 19:52:28] VERSION_ID="7"
[2025-04-17 19:52:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-17 19:52:28] ANSI_COLOR="0;31"
[2025-04-17 19:52:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-17 19:52:28] HOME_URL="https://www.centos.org/"
[2025-04-17 19:52:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-17 19:52:28] 
[2025-04-17 19:52:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-17 19:52:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-17 19:52:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-17 19:52:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-17 19:52:28] 
[2025-04-17 19:52:28] 2025-04-18 02:52:11,148 | INFO     | **************************************
[2025-04-17 19:52:28] 2025-04-18 02:52:11,650 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/20
[2025-04-17 19:52:28] 2025-04-18 02:52:11,670 | INFO     | sufficient remaining disk space (399666839552 B)
[2025-04-17 19:52:28] 2025-04-18 02:52:11,670 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-17 19:52:28] 2025-04-18 02:52:11,670 | INFO     | current server update state: UPDATING_FINAL
[2025-04-17 19:52:28] 2025-04-18 02:52:11,670 | INFO     | update_server=False
[2025-04-17 19:52:28] 2025-04-18 02:52:11,670 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-17 19:52:28] 2025-04-18 02:52:11,671 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-17 19:52:28] 2025-04-18 02:52:11,681 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-04-17 19:52:28] 2025-04-18 02:52:11,681 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-04-17 19:52:28] 2025-04-18 02:52:11,681 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-17 19:52:28] 2025-04-18 02:52:11,681 | INFO     | will abort loop
[2025-04-17 19:52:28] 2025-04-18 02:52:11,780 | INFO     | all data control threads have been joined
[2025-04-17 19:52:28] 2025-04-18 02:52:11,790 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-17 19:52:28] 2025-04-18 02:52:12,116 | INFO     | PID=513576 has CPU usage=5.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-04-17 19:52:28] 2025-04-18 02:52:12,116 | INFO     | .. there are 10 such processes running
[2025-04-17 19:52:28] 2025-04-18 02:52:12,116 | INFO     | found 0 job(s) in 20 queues
[2025-04-17 19:52:28] 2025-04-18 02:52:12,116 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-17 19:52:28] 2025-04-18 02:52:12,116 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-17 19:52:28] 2025-04-18 02:52:12,675 | INFO     | [job] retrieve thread has finished
[2025-04-17 19:52:28] 2025-04-18 02:52:12,676 | INFO     | [job] queue monitor thread has finished
[2025-04-17 19:52:28] 2025-04-18 02:52:12,686 | INFO     | [job] job monitor thread has finished
[2025-04-17 19:52:28] 2025-04-18 02:52:12,785 | INFO     | [data] control thread has finished
[2025-04-17 19:52:28] 2025-04-18 02:52:12,919 | INFO     | [payload] execute_payloads thread has finished
[2025-04-17 19:52:28] 2025-04-18 02:52:12,975 | INFO     | all job control threads have been joined
[2025-04-17 19:52:28] 2025-04-18 02:52:13,012 | INFO     | [payload] failed_post thread has finished
[2025-04-17 19:52:28] 2025-04-18 02:52:13,039 | INFO     | all payload control threads have been joined
[2025-04-17 19:52:28] 2025-04-18 02:52:13,572 | INFO     | [payload] validate_post thread has finished
[2025-04-17 19:52:28] 2025-04-18 02:52:13,623 | INFO     | [job] create_data_payload thread has finished
[2025-04-17 19:52:28] 2025-04-18 02:52:13,698 | INFO     | [job] validate thread has finished
[2025-04-17 19:52:28] 2025-04-18 02:52:13,795 | INFO     | [data] copytool_out thread has finished
[2025-04-17 19:52:28] 2025-04-18 02:52:13,855 | INFO     | [payload] validate_pre thread has finished
[2025-04-17 19:52:28] 2025-04-18 02:52:13,981 | INFO     | [job] control thread has finished
[2025-04-17 19:52:28] 2025-04-18 02:52:14,044 | INFO     | [payload] control thread has finished
[2025-04-17 19:52:28] 2025-04-18 02:52:14,174 | INFO     | [data] copytool_in thread has finished
[2025-04-17 19:52:28] 2025-04-18 02:52:14,339 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-17 19:52:28] 2025-04-18 02:52:18,344 | INFO     | [data] queue_monitor thread has finished
[2025-04-17 19:52:28] 2025-04-18 02:52:21,974 | INFO     | job.realtimelogging is not enabled
[2025-04-17 19:52:28] 2025-04-18 02:52:22,979 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-17 19:52:28] 2025-04-18 02:52:23,302 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 125706459039552)>', '<ExcThread(monitor, started 125705681618688)>']
[2025-04-17 19:52:28] 2025-04-18 02:52:24,176 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-17 19:52:28] 2025-04-18 02:52:24,176 | INFO     | [monitor] control thread has ended
[2025-04-17 19:52:28] 2025-04-18 02:52:28,327 | INFO     | all workflow threads have been joined
[2025-04-17 19:52:28] 2025-04-18 02:52:28,327 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-17 19:52:28] 2025-04-18 02:52:28,327 | INFO     | traces error code: 0
[2025-04-17 19:52:28] 2025-04-18 02:52:28,327 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-17 19:52:28] 2025-04-18 02:52:28,401 [wrapper] ==== pilot stdout END ====
[2025-04-17 19:52:28] 2025-04-18 02:52:28,403 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-17 19:52:28] 2025-04-18 02:52:28,405 [wrapper] pilotpid: 513576
[2025-04-17 19:52:28] 2025-04-18 02:52:28,406 [wrapper] Pilot exit status: 0
[2025-04-17 19:52:28] 2025-04-18 02:52:28,423 [wrapper] pandaids: 6605003874
[2025-04-17 19:52:28] 2025-04-18 02:52:28,456 [wrapper] cleanup supervisor_pilot  853470 513577
[2025-04-17 19:52:28] 2025-04-18 02:52:28,458 [wrapper] Test setup, not cleaning
[2025-04-17 19:52:28] 2025-04-18 02:52:28,464 [wrapper] apfmon messages muted
[2025-04-17 19:52:28] 2025-04-18 02:52:28,465 [wrapper] ==== wrapper stdout END ====
[2025-04-17 19:52:28] 2025-04-18 02:52:28,467 [wrapper] ==== wrapper stderr END ====
[2025-04-17 19:52:28]  *** Error codes and diagnostics ***
[2025-04-17 19:52:28]     "exeErrorCode": 0,
[2025-04-17 19:52:28]     "exeErrorDiag": "",
[2025-04-17 19:52:28]     "pilotErrorCode": 0,
[2025-04-17 19:52:28]     "pilotErrorDiag": "",
[2025-04-17 19:52:28]  *** Listing of results directory ***
[2025-04-17 19:52:28] total 417152
[2025-04-17 19:52:28] -rw-r--r-- 1 boinc boinc    495897 Apr 16 23:03 pilot3.tar.gz
[2025-04-17 19:52:28] -rw-r--r-- 1 boinc boinc      5111 Apr 16 23:12 queuedata.json
[2025-04-17 19:52:28] -rwx------ 1 boinc boinc     37140 Apr 16 23:16 runpilot2-wrapper.sh
[2025-04-17 19:52:28] -rw-r--r-- 1 boinc boinc       100 Apr 17 17:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-17 19:52:28] -rwxr-xr-x 1 boinc boinc      7986 Apr 17 17:04 run_atlas
[2025-04-17 19:52:28] -rw-r--r-- 1 boinc boinc       105 Apr 17 17:04 job.xml
[2025-04-17 19:52:28] -rw-r--r-- 1 boinc boinc     10304 Apr 17 17:04 init_data.xml
[2025-04-17 19:52:28] -rw-r--r-- 2 boinc boinc 226473227 Apr 17 17:04 EVNT.44075481._002011.pool.root.1
[2025-04-17 19:52:28] -rw-r--r-- 2 boinc boinc     17569 Apr 17 17:04 start_atlas.sh
[2025-04-17 19:52:28] drwxrwx--x 2 boinc boinc      4096 Apr 17 17:04 shared
[2025-04-17 19:52:28] -rw-r--r-- 2 boinc boinc    508895 Apr 17 17:04 input.tar.gz
[2025-04-17 19:52:28] -rw-r--r-- 1 boinc boinc         0 Apr 17 17:04 boinc_lockfile
[2025-04-17 19:52:28] -rw-r--r-- 1 boinc boinc      2578 Apr 17 17:04 pandaJob.out
[2025-04-17 19:52:28] -rw------- 1 boinc boinc       424 Apr 17 17:04 setup.sh.local
[2025-04-17 19:52:28] -rw------- 1 boinc boinc    990266 Apr 17 17:04 agis_schedconf.cvmfs.json
[2025-04-17 19:52:28] -rw------- 1 boinc boinc   1618536 Apr 17 17:04 agis_ddmendpoints.agis.ALL.json
[2025-04-17 19:52:28] drwx------ 4 boinc boinc      4096 Apr 17 17:04 pilot3
[2025-04-17 19:52:28] -rw------- 1 boinc boinc        95 Apr 17 19:51 pilot_heartbeat.json
[2025-04-17 19:52:28] -rw------- 1 boinc boinc 194338238 Apr 17 19:51 HITS.44075483._051535.pool.root.1
[2025-04-17 19:52:28] -rw-r--r-- 1 boinc boinc       531 Apr 17 19:51 boinc_task_state.xml
[2025-04-17 19:52:28] -rw------- 1 boinc boinc      1020 Apr 17 19:51 memory_monitor_summary.json
[2025-04-17 19:52:28] -rw------- 1 boinc boinc    264917 Apr 17 19:52 log.44075483._051535.job.log.tgz.1
[2025-04-17 19:52:28] -rw------- 1 boinc boinc      7665 Apr 17 19:52 heartbeat.json
[2025-04-17 19:52:28] -rw-r--r-- 1 boinc boinc      8192 Apr 17 19:52 boinc_mmap_file
[2025-04-17 19:52:28] -rw-r--r-- 1 boinc boinc        28 Apr 17 19:52 wrapper_checkpoint.txt
[2025-04-17 19:52:28] -rw------- 1 boinc boinc      5014 Apr 17 19:52 pilotlog.txt
[2025-04-17 19:52:28] -rw------- 1 boinc boinc    977052 Apr 17 19:52 log.44075483._051535.job.log.1
[2025-04-17 19:52:28] -rw------- 1 boinc boinc       357 Apr 17 19:52 output.list
[2025-04-17 19:52:28] -rw-r--r-- 1 boinc boinc       620 Apr 17 19:52 runtime_log
[2025-04-17 19:52:28] -rw------- 1 boinc boinc   1259520 Apr 17 19:52 result.tar.gz
[2025-04-17 19:52:28] -rw-r--r-- 1 boinc boinc     11177 Apr 17 19:52 runtime_log.err
[2025-04-17 19:52:28] -rw------- 1 boinc boinc       659 Apr 17 19:52 lX3MDmLjXP7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmCEcLDmVUg6vm.diag
[2025-04-17 19:52:28] -rw-r--r-- 1 boinc boinc     21039 Apr 17 19:52 stderr.txt
[2025-04-17 19:52:28] HITS file was successfully produced:
[2025-04-17 19:52:28] -rw------- 1 boinc boinc 194338238 Apr 17 19:51 shared/HITS.pool.root.1
[2025-04-17 19:52:28]  *** Contents of shared directory: ***
[2025-04-17 19:52:28] total 412712
[2025-04-17 19:52:28] -rw-r--r-- 2 boinc boinc 226473227 Apr 17 17:04 ATLAS.root_0
[2025-04-17 19:52:28] -rw-r--r-- 2 boinc boinc     17569 Apr 17 17:04 start_atlas.sh
[2025-04-17 19:52:28] -rw-r--r-- 2 boinc boinc    508895 Apr 17 17:04 input.tar.gz
[2025-04-17 19:52:28] -rw------- 1 boinc boinc 194338238 Apr 17 19:51 HITS.pool.root.1
[2025-04-17 19:52:28] -rw------- 1 boinc boinc   1259520 Apr 17 19:52 result.tar.gz
19:52:30 (509783): run_atlas exited; CPU time 18654.835209
19:52:30 (509783): called boinc_finish(0)

</stderr_txt>
]]>

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