Stderr output

<core_client_version>7.16.20</core_client_version>
<![CDATA[
<stderr_txt>
2025-04-18 09:53:28 (7336): Detected: vboxwrapper 26206
2025-04-18 09:53:28 (7336): Detected: BOINC client v7.16.20
2025-04-18 09:53:28 (7336): Detected: VirtualBox VboxManage Interface (Version: 6.1.50)
2025-04-18 09:53:29 (7336): Successfully copied 'init_data.xml' to the shared directory.
2025-04-18 09:53:29 (7336): Create VM. (boinc_79a0c6a5d4bb84ef, slot#5)
2025-04-18 09:53:30 (7336): Setting Memory Size for VM. (4800MB)
2025-04-18 09:53:30 (7336): Setting CPU Count for VM. (8)
2025-04-18 09:53:30 (7336): Setting Chipset Options for VM.
2025-04-18 09:53:30 (7336): Setting Graphics Controller Options for VM.
2025-04-18 09:53:31 (7336): Setting Boot Options for VM.
2025-04-18 09:53:31 (7336): Setting Network Configuration for NAT.
2025-04-18 09:53:31 (7336): Enabling VM Network Access.
2025-04-18 09:53:31 (7336): Disabling USB Support for VM.
2025-04-18 09:53:32 (7336): Disabling COM Port Support for VM.
2025-04-18 09:53:32 (7336): Disabling LPT Port Support for VM.
2025-04-18 09:53:32 (7336): Disabling Audio Support for VM.
2025-04-18 09:53:32 (7336): Disabling Clipboard Support for VM.
2025-04-18 09:53:33 (7336): Disabling Drag and Drop Support for VM.
2025-04-18 09:53:33 (7336): Adding storage controller(s) to VM.
2025-04-18 09:53:33 (7336): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-04-18 09:53:34 (7336): Adding VirtualBox Guest Additions to VM.
2025-04-18 09:53:34 (7336): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-04-18 09:53:34 (7336): forwarding host port 56944 to guest port 80
2025-04-18 09:53:34 (7336): Enabling remote desktop for VM.
2025-04-18 09:53:35 (7336): Required extension pack not installed, remote desktop not enabled.
2025-04-18 09:53:35 (7336): Enabling shared directory for VM.
2025-04-18 09:53:35 (7336): Starting VM using VBoxManage interface. (boinc_79a0c6a5d4bb84ef, slot#5)
2025-04-18 09:53:39 (7336): Successfully started VM. (PID = '5700')
2025-04-18 09:53:39 (7336): Reporting VM Process ID to BOINC.
2025-04-18 09:53:39 (7336): Guest Log: BIOS: VirtualBox 6.1.50
2025-04-18 09:53:39 (7336): Guest Log: CPUID EDX: 0x178bfbff
2025-04-18 09:53:39 (7336): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-04-18 09:53:39 (7336): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-04-18 09:53:39 (7336): VM state change detected. (old = 'poweredoff', new = 'running')
2025-04-18 09:53:39 (7336): Detected: Web Application Enabled (http://localhost:56944)
2025-04-18 09:53:39 (7336): Preference change detected
2025-04-18 09:53:39 (7336): Setting CPU throttle for VM. (100%)
2025-04-18 09:53:39 (7336): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-18 09:53:41 (7336): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-04-18 09:53:41 (7336): Guest Log: BIOS: Booting from Hard Disk...
2025-04-18 09:53:44 (7336): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-04-18 09:53:44 (7336): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-04-18 09:53:44 (7336): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-04-18 09:53:44 (7336): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-04-18 09:53:44 (7336): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-04-18 09:53:44 (7336): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-04-18 09:53:44 (7336): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-04-18 09:53:44 (7336): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-04-18 09:53:44 (7336): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-04-18 09:53:44 (7336): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-04-18 09:53:44 (7336): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-04-18 09:53:44 (7336): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-04-18 09:53:44 (7336): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-04-18 09:53:44 (7336): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-04-18 09:53:44 (7336): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-04-18 09:53:44 (7336): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-04-18 09:53:44 (7336): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-04-18 09:53:44 (7336): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-04-18 09:53:44 (7336): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-04-18 09:53:44 (7336): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-04-18 09:53:44 (7336): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-04-18 09:53:44 (7336): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-04-18 09:53:44 (7336): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-04-18 09:53:44 (7336): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-04-18 09:53:44 (7336): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-04-18 09:53:44 (7336): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-04-18 09:53:44 (7336): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-04-18 09:53:44 (7336): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-04-18 09:53:44 (7336): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-04-18 09:53:44 (7336): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-04-18 09:53:44 (7336): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-04-18 09:53:44 (7336): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-04-18 09:53:50 (7336): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-04-18 09:53:50 (7336): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-04-18 09:53:54 (7336): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-04-18 09:53:54 (7336): Guest Log: 00:00:00.000095 main     Log opened 2025-04-18T09:53:53.095798000Z
2025-04-18 09:53:54 (7336): Guest Log: 00:00:00.000165 main     OS Product: Linux
2025-04-18 09:53:54 (7336): Guest Log: 00:00:00.000183 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-04-18 09:53:54 (7336): Guest Log: 00:00:00.000198 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-04-18 09:53:54 (7336): Guest Log: 00:00:00.000213 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-04-18 09:53:54 (7336): Guest Log: 00:00:00.000213 main     Process ID: 1368
2025-04-18 09:53:54 (7336): Guest Log: 00:00:00.000214 main     Package type: LINUX_64BITS_GENERIC
2025-04-18 09:53:54 (7336): Guest Log: 00:00:00.000662 main     5.2.32 r132073 started. Verbose level = 0
2025-04-18 09:53:55 (7336): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-04-18 09:53:55 (7336): Guest Log: [INFO] Mounting shared directory
2025-04-18 09:53:55 (7336): Guest Log: [INFO] Checking for init_data.xml
2025-04-18 09:53:57 (7336): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-04-18 09:53:57 (7336): Guest Log: [INFO] Detected branch: prod
2025-04-18 09:53:57 (7336): Guest Log: This is the prod version of the ATLAS job wrapper
2025-04-18 09:53:57 (7336): Guest Log: Copying input files
2025-04-18 09:53:58 (7336): Guest Log: Copied input files into RunAtlas.
2025-04-18 09:53:58 (7336): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-04-18 09:53:58 (7336): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-04-18 09:53:58 (7336): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-04-18 09:53:58 (7336): Guest Log: Further information can be found at the LHC@home message board.
2025-04-18 09:54:04 (7336): Guest Log: 00:00:10.007848 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 945 135 000ns (GuestNow=1 744 962 844 152 183 000 ns GuestLast=1 744 970 033 097 318 000 ns fSetTimeLastLoop=true )
2025-04-18 09:54:06 (7336): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-04-18 09:54:06 (7336): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-04-18 09:54:06 (7336): Guest Log: 2.6.3.0 1643 0 32212 144994 4 1 3117322 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-04-18 09:54:09 (7336): Guest Log: copied the webapp to /var/www
2025-04-18 09:54:09 (7336): Guest Log: ATHENA_PROC_NUMBER=8
2025-04-18 09:54:09 (7336): Guest Log: ATHENA_CORE_NUMBER=8
2025-04-18 09:54:09 (7336): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-04-18 09:54:09 (7336): Guest Log:  *** Starting ATLAS job. (PandaID=6595825977 taskID=44075164) ***
2025-04-18 11:00:42 (7336): Guest Log:  *** Job finished ***
2025-04-18 11:00:42 (7336): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-18 11:00:42 (7336): Guest Log: 2025-04-18 09:00:31,808 | INFO     | [job] control thread has finished
2025-04-18 11:00:42 (7336): Guest Log: 2025-04-18 09:00:31,999 | INFO     | [payload] failed_post thread has finished
2025-04-18 11:00:42 (7336): Guest Log: 2025-04-18 09:00:34,039 | INFO     | [data] queue_monitor thread has finished
2025-04-18 11:00:42 (7336): Guest Log: 2025-04-18 09:00:34,411 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139866793903936)>', '<ExcThread(monitor, started 139865475774208)>']
2025-04-18 11:00:42 (7336): Guest Log: 2025-04-18 09:00:34,893 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-18 11:00:42 (7336): Guest Log: 2025-04-18 09:00:34,893 | INFO     | [monitor] control thread has ended
2025-04-18 11:00:42 (7336): Guest Log: 2025-04-18 09:00:39,464 | INFO     | all workflow threads have been joined
2025-04-18 11:00:42 (7336): Guest Log: 2025-04-18 09:00:39,464 | INFO     | end of generic workflow (traces error code: 0)
2025-04-18 11:00:42 (7336): Guest Log: 2025-04-18 09:00:39,464 | INFO     | traces error code: 0
2025-04-18 11:00:42 (7336): Guest Log: 2025-04-18 09:00:39,464 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-18 11:00:42 (7336): Guest Log: 2025-04-18 09:00:39,514 [wrapper] ==== pilot stdout END ====
2025-04-18 11:00:42 (7336): Guest Log: 2025-04-18 09:00:39,518 [wrapper] ==== wrapper stdout RESUME ====
2025-04-18 11:00:42 (7336): Guest Log: 2025-04-18 09:00:39,521 [wrapper] pilotpid: 6013
2025-04-18 11:00:42 (7336): Guest Log: 2025-04-18 09:00:39,525 [wrapper] Pilot exit status: 0
2025-04-18 11:00:42 (7336): Guest Log: 2025-04-18 09:00:39,648 [wrapper] pandaids: 6595825977
2025-04-18 11:00:42 (7336): Guest Log: 2025-04-18 09:00:39,667 [wrapper] cleanup supervisor_pilot 31066 6014
2025-04-18 11:00:42 (7336): Guest Log: 2025-04-18 09:00:39,674 [wrapper] Test setup, not cleaning
2025-04-18 11:00:42 (7336): Guest Log: 2025-04-18 09:00:39,677 [wrapper] apfmon messages muted
2025-04-18 11:00:42 (7336): Guest Log: 2025-04-18 09:00:39,680 [wrapper] ==== wrapper stdout END ====
2025-04-18 11:00:42 (7336): Guest Log: 2025-04-18 09:00:39,684 [wrapper] ==== wrapper stderr END ====
2025-04-18 11:00:42 (7336): Guest Log:  *** Error codes and diagnostics ***
2025-04-18 11:00:42 (7336): Guest Log:     "exeErrorCode": 0,
2025-04-18 11:00:42 (7336): Guest Log:     "exeErrorDiag": "",
2025-04-18 11:00:42 (7336): Guest Log:     "pilotErrorCode": 0,
2025-04-18 11:00:42 (7336): Guest Log:     "pilotErrorDiag": "",
2025-04-18 11:00:42 (7336): Guest Log:  *** Listing of results directory ***
2025-04-18 11:00:42 (7336): Guest Log: total 197088
2025-04-18 11:00:42 (7336): Guest Log: -rw-r--r--. 1 atlas atlas    495897 Apr 10 11:14 pilot3.tar.gz
2025-04-18 11:00:42 (7336): Guest Log: -rwx------. 1 atlas atlas     37140 Apr 10 11:27 runpilot2-wrapper.sh
2025-04-18 11:00:42 (7336): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Apr 10 11:27 queuedata.json
2025-04-18 11:00:42 (7336): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 Apr 18 07:53 start_atlas.sh
2025-04-18 11:00:42 (7336): Guest Log: -rwxr-xr-x. 1 atlas atlas    508881 Apr 18 07:53 input.tar.gz
2025-04-18 11:00:42 (7336): Guest Log: -rwxr-xr-x. 1 atlas atlas      8773 Apr 18 07:53 init_data.xml
2025-04-18 11:00:42 (7336): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr 18 07:53 EVNT.44075162._001017.pool.root.1 -> /data/./ATLAS.root_0
2025-04-18 11:00:42 (7336): Guest Log: -rw-r--r--. 1 atlas atlas      2550 Apr 18 07:54 pandaJob.out
2025-04-18 11:00:42 (7336): Guest Log: -rw-------. 1 atlas atlas       424 Apr 18 07:54 setup.sh.local
2025-04-18 11:00:42 (7336): Guest Log: -rw-------. 1 atlas atlas    990242 Apr 18 07:54 agis_schedconf.cvmfs.json
2025-04-18 11:00:42 (7336): Guest Log: -rw-------. 1 atlas atlas   1618536 Apr 18 07:54 agis_ddmendpoints.agis.ALL.json
2025-04-18 11:00:42 (7336): Guest Log: drwx------. 4 atlas atlas      4096 Apr 18 07:54 pilot3
2025-04-18 11:00:42 (7336): Guest Log: -rw-------. 1 atlas atlas        95 Apr 18 08:59 pilot_heartbeat.json
2025-04-18 11:00:42 (7336): Guest Log: -rw-------. 1 atlas atlas 196687180 Apr 18 09:00 HITS.44075164._025593.pool.root.1
2025-04-18 11:00:42 (7336): Guest Log: -rw-------. 1 atlas atlas      1027 Apr 18 09:00 memory_monitor_summary.json
2025-04-18 11:00:42 (7336): Guest Log: -rw-------. 1 atlas atlas    296788 Apr 18 09:00 log.44075164._025593.job.log.tgz.1
2025-04-18 11:00:42 (7336): Guest Log: -rw-------. 1 atlas atlas      7713 Apr 18 09:00 heartbeat.json
2025-04-18 11:00:42 (7336): Guest Log: -rw-------. 1 atlas atlas      4729 Apr 18 09:00 pilotlog.txt
2025-04-18 11:00:42 (7336): Guest Log: -rw-------. 1 atlas atlas    370869 Apr 18 09:00 log.44075164._025593.job.log.1
2025-04-18 11:00:42 (7336): Guest Log: -rw-------. 1 atlas atlas       357 Apr 18 09:00 output.list
2025-04-18 11:00:42 (7336): Guest Log: -rw-r--r--. 1 atlas atlas       620 Apr 18 09:00 runtime_log
2025-04-18 11:00:42 (7336): Guest Log: -rw-------. 1 atlas atlas    686080 Apr 18 09:00 result.tar.gz
2025-04-18 11:00:42 (7336): Guest Log: -rw-r--r--. 1 atlas atlas     10935 Apr 18 09:00 runtime_log.err
2025-04-18 11:00:42 (7336): Guest Log: -rw-------. 1 atlas atlas       650 Apr 18 09:00 0ATMDm7E5M7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmkjwKDmBOnf8n.diag
2025-04-18 11:00:42 (7336): Guest Log: Looking for outputfile HITS.44075164._025593.pool.root.1
2025-04-18 11:00:42 (7336): Guest Log: HITS file was successfully produced
2025-04-18 11:00:42 (7336): Guest Log: -rw-------. 1 atlas atlas 196687180 Apr 18 09:00 /home/atlas/RunAtlas/HITS.44075164._025593.pool.root.1
2025-04-18 11:00:43 (7336): Guest Log: Successfully finished the ATLAS job!
2025-04-18 11:00:43 (7336): Guest Log: Copying the results back to the shared directory!
2025-04-18 11:00:43 (7336): Guest Log:  *** Contents of shared directory: ***
2025-04-18 11:00:43 (7336): Guest Log: total 408312
2025-04-18 11:00:43 (7336): Guest Log: -rwxrwxrwx. 1 root root 220186110 Apr 18 07:53 ATLAS.root_0
2025-04-18 11:00:43 (7336): Guest Log: -rwxrwxrwx. 1 root root 196687180 Apr 18  2025 HITS.pool.root.1
2025-04-18 11:00:43 (7336): Guest Log: -rwxrwxrwx. 1 root root      8773 Apr 18 07:53 init_data.xml
2025-04-18 11:00:43 (7336): Guest Log: -rwxrwxrwx. 1 root root    508881 Apr 17 21:29 input.tar.gz
2025-04-18 11:00:43 (7336): Guest Log: -rwxrwxrwx. 1 root root    686080 Apr 18  2025 result.tar.gz
2025-04-18 11:00:43 (7336): Guest Log: -rwxrwxrwx. 1 root root     17569 Apr 17 21:29 start_atlas.sh
2025-04-18 11:00:43 (7336): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-18 11:00:43 (7336): VM Completion File Detected.
2025-04-18 11:00:43 (7336): Powering off VM.
2025-04-18 11:00:43 (7336): Successfully stopped VM.
2025-04-18 11:00:43 (7336): Deregistering VM. (boinc_79a0c6a5d4bb84ef, slot#5)
2025-04-18 11:00:43 (7336): Removing network bandwidth throttle group from VM.
2025-04-18 11:00:44 (7336): Removing VM from VirtualBox.
11:00:49 (7336): called boinc_finish(0)

</stderr_txt>
]]>

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