Stderr output

<core_client_version>7.18.1</core_client_version>
<![CDATA[
<stderr_txt>
00:47:28 (322785): wrapper (7.7.26015): starting
00:47:28 (322785): wrapper: running run_atlas (--nthreads 6)
[2025-04-18 00:47:28] Arguments: --nthreads 6
[2025-04-18 00:47:28] Threads: 6
[2025-04-18 00:47:28] Checking for CVMFS
[2025-04-18 00:47:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-18 00:47:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-18 00:47:28] Running cvmfs_config stat atlas.cern.ch
[2025-04-18 00:47:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-18 00:47:28] 2.11.5.0 148930 167 50068 144981 1 56 2367085 4194304 0 130560 0 398892 99.991 146588 710 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.3.250:3128 1
[2025-04-18 00:47:28] CVMFS is ok
[2025-04-18 00:47:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-18 00:47:28] Checking for apptainer binary...
[2025-04-18 00:47:28] apptainer is not installed, using version from CVMFS
[2025-04-18 00:47:28] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-18 00:47:29] boinc-b450f
[2025-04-18 00:47:29] apptainer works
[2025-04-18 00:47:29] Set ATHENA_PROC_NUMBER=6
[2025-04-18 00:47:29] Set ATHENA_CORE_NUMBER=6
[2025-04-18 00:47:29] Starting ATLAS job with PandaID=6605312497
[2025-04-18 00:47:29] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-18 02:02:09]  *** The last 200 lines of the pilot log: ***
[2025-04-18 02:02:09]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-04-18 02:02:09]  is_altstaged=None
[2025-04-18 02:02:09]  is_tar=False
[2025-04-18 02:02:09]  lfn=log.44075483._054718.job.log.tgz.1
[2025-04-18 02:02:09]  mtime=0
[2025-04-18 02:02:09]  protocol_id=None
[2025-04-18 02:02:09]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-18 02:02:09]  replicas=None
[2025-04-18 02:02:09]  scope=mc23_13p6TeV
[2025-04-18 02:02:09]  status=None
[2025-04-18 02:02:09]  status_code=0
[2025-04-18 02:02:09]  storage_token=
[2025-04-18 02:02:09]  surl=/var/lib/boinc-client/slots/5/PanDA_Pilot-6605312497/log.44075483._054718.job.log.tgz.1
[2025-04-18 02:02:09]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d6/65/log.44075483._054718.job.log.tgz.1
[2025-04-18 02:02:09]  workdir=None
[2025-04-18 02:02:09] ]
[2025-04-18 02:02:09] 2025-04-18 00:01:43,161 | INFO     | transferring file log.44075483._054718.job.log.tgz.1 from /var/lib/boinc-client/slots/5/PanDA_Pilot-6605312497/log.44075483._054718.job.log.tgz.1 to /var/lib/boinc
[2025-04-18 02:02:09] 2025-04-18 00:01:43,161 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/5/PanDA_Pilot-6605312497/log.44075483._054718.job.log.tgz.1 /var/lib/boinc-client/slots/5/log.440754
[2025-04-18 02:02:09] 2025-04-18 00:01:43,168 | INFO     | adding to output.list: log.44075483._054718.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d6/65/log.44075483._054718.job.log.tg
[2025-04-18 02:02:09] 2025-04-18 00:01:43,168 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-18 02:02:09] 2025-04-18 00:01:43,168 | INFO     | summary of transferred files:
[2025-04-18 02:02:09] 2025-04-18 00:01:43,168 | INFO     |  -- lfn=log.44075483._054718.job.log.tgz.1, status_code=0, status=transferred
[2025-04-18 02:02:09] 2025-04-18 00:01:43,168 | INFO     | stage-out finished correctly
[2025-04-18 02:02:09] 2025-04-18 00:01:43,561 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-18 02:02:09] 2025-04-18 00:01:44,579 | WARNING  | process 333429 can no longer be monitored (due to stat problems) - aborting
[2025-04-18 02:02:09] 2025-04-18 00:01:44,579 | INFO     | using path: /var/lib/boinc-client/slots/5/PanDA_Pilot-6605312497/memory_monitor_summary.json (trf name=prmon)
[2025-04-18 02:02:09] 2025-04-18 00:01:44,651 | INFO     | number of running child processes to parent process 333429: 1
[2025-04-18 02:02:09] 2025-04-18 00:01:44,651 | INFO     | maximum number of monitored processes: 6
[2025-04-18 02:02:09] 2025-04-18 00:01:45,216 | INFO     | job 6605312497 has state=finished
[2025-04-18 02:02:09] 2025-04-18 00:01:45,216 | INFO     | preparing for final server update for job 6605312497 in state='finished'
[2025-04-18 02:02:09] 2025-04-18 00:01:45,217 | INFO     | this job has now completed (state=finished)
[2025-04-18 02:02:09] 2025-04-18 00:01:45,217 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-18 02:02:09] 2025-04-18 00:01:45,217 | INFO     | log transfer has been attempted: DONE
[2025-04-18 02:02:09] 2025-04-18 00:01:45,217 | INFO     | job 6605312497 has finished - writing final server update
[2025-04-18 02:02:09] 2025-04-18 00:01:45,217 | INFO     | total number of processed events: 400 (read)
[2025-04-18 02:02:09] 2025-04-18 00:01:45,219 | INFO     | executing command: lscpu
[2025-04-18 02:02:09] 2025-04-18 00:01:45,231 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-18 02:02:09] 2025-04-18 00:01:47,154 | INFO     | monitor loop #340: job 0:6605312497 is in state 'finished'
[2025-04-18 02:02:09] 2025-04-18 00:01:47,154 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-18 02:02:09] 2025-04-18 00:01:47,643 | INFO     | PID=326541 has CPU usage=4.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-04-18 02:02:09] 2025-04-18 00:01:49,374 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-18 02:02:09] 2025-04-18 00:01:49,374 | INFO     | using path: /var/lib/boinc-client/slots/5/PanDA_Pilot-6605312497/memory_monitor_summary.json (trf name=prmon)
[2025-04-18 02:02:09] 2025-04-18 00:01:49,374 | INFO     | extracted standard info from prmon json
[2025-04-18 02:02:09] 2025-04-18 00:01:49,374 | INFO     | extracted standard memory fields from prmon json
[2025-04-18 02:02:09] 2025-04-18 00:01:49,374 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-18 02:02:09] 2025-04-18 00:01:49,375 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-18 02:02:09] 2025-04-18 00:01:49,375 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-18 02:02:09] 2025-04-18 00:01:49,375 | INFO     | fitting pss+swap vs Time
[2025-04-18 02:02:09] 2025-04-18 00:01:49,375 | INFO     | sum of square deviations: 89127252.5
[2025-04-18 02:02:09] 2025-04-18 00:01:49,375 | INFO     | sum of deviations: -11275592336.000004
[2025-04-18 02:02:09] 2025-04-18 00:01:49,375 | INFO     | mean x: 1744932362.5
[2025-04-18 02:02:09] 2025-04-18 00:01:49,376 | INFO     | mean y: 2630895.303030303
[2025-04-18 02:02:09] 2025-04-18 00:01:49,376 | INFO     | -- intersect: 220756052789.95172
[2025-04-18 02:02:09] 2025-04-18 00:01:49,376 | INFO     | intersect: 220756052789.95172
[2025-04-18 02:02:09] 2025-04-18 00:01:49,376 | INFO     | chi2: 0.181253652641412
[2025-04-18 02:02:09] 2025-04-18 00:01:49,376 | INFO     | -- intersect: 220756052789.95172
[2025-04-18 02:02:09] 2025-04-18 00:01:49,376 | INFO     | current memory leak: -126.51 B/s (using 66 data points, chi2=0.18)
[2025-04-18 02:02:09] 2025-04-18 00:01:49,376 | INFO     | ..............................
[2025-04-18 02:02:09] 2025-04-18 00:01:49,376 | INFO     | . Timing measurements:
[2025-04-18 02:02:09] 2025-04-18 00:01:49,376 | INFO     | . get job = 0 s
[2025-04-18 02:02:09] 2025-04-18 00:01:49,376 | INFO     | . initial setup = 2 s
[2025-04-18 02:02:09] 2025-04-18 00:01:49,376 | INFO     | . payload setup = 2 s
[2025-04-18 02:02:09] 2025-04-18 00:01:49,376 | INFO     | . stage-in = 0 s
[2025-04-18 02:02:09] 2025-04-18 00:01:49,376 | INFO     | . payload execution = 4427 s
[2025-04-18 02:02:09] 2025-04-18 00:01:49,376 | INFO     | . stage-out = 0 s
[2025-04-18 02:02:09] 2025-04-18 00:01:49,376 | INFO     | . log creation = 0 s
[2025-04-18 02:02:09] 2025-04-18 00:01:49,376 | INFO     | ..............................
[2025-04-18 02:02:09] 2025-04-18 00:01:49,516 | INFO     | 
[2025-04-18 02:02:09] 2025-04-18 00:01:49,516 | INFO     | job summary report
[2025-04-18 02:02:09] 2025-04-18 00:01:49,516 | INFO     | --------------------------------------------------
[2025-04-18 02:02:09] 2025-04-18 00:01:49,516 | INFO     | PanDA job id: 6605312497
[2025-04-18 02:02:09] 2025-04-18 00:01:49,516 | INFO     | task id: 44075483
[2025-04-18 02:02:09] 2025-04-18 00:01:49,516 | INFO     | errors: (none)
[2025-04-18 02:02:09] 2025-04-18 00:01:49,516 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-18 02:02:09] 2025-04-18 00:01:49,516 | INFO     | pilot state: finished 
[2025-04-18 02:02:09] 2025-04-18 00:01:49,516 | INFO     | transexitcode: 0
[2025-04-18 02:02:09] 2025-04-18 00:01:49,516 | INFO     | exeerrorcode: 0
[2025-04-18 02:02:09] 2025-04-18 00:01:49,517 | INFO     | exeerrordiag: 
[2025-04-18 02:02:09] 2025-04-18 00:01:49,517 | INFO     | exitcode: 0
[2025-04-18 02:02:09] 2025-04-18 00:01:49,517 | INFO     | exitmsg: OK
[2025-04-18 02:02:09] 2025-04-18 00:01:49,517 | INFO     | cpuconsumptiontime: 24132 s
[2025-04-18 02:02:09] 2025-04-18 00:01:49,517 | INFO     | nevents: 400
[2025-04-18 02:02:09] 2025-04-18 00:01:49,517 | INFO     | neventsw: 0
[2025-04-18 02:02:09] 2025-04-18 00:01:49,517 | INFO     | pid: 333429
[2025-04-18 02:02:09] 2025-04-18 00:01:49,517 | INFO     | pgrp: 333429
[2025-04-18 02:02:09] 2025-04-18 00:01:49,517 | INFO     | corecount: 6
[2025-04-18 02:02:09] 2025-04-18 00:01:49,517 | INFO     | event service: False
[2025-04-18 02:02:09] 2025-04-18 00:01:49,517 | INFO     | sizes: {0: 2426831, 1: 2427037, 11: 2427065, 4433: 2453231, 4434: 2462242, 4440: 2462356}
[2025-04-18 02:02:09] 2025-04-18 00:01:49,517 | INFO     | --------------------------------------------------
[2025-04-18 02:02:09] 2025-04-18 00:01:49,517 | INFO     | 
[2025-04-18 02:02:09] 2025-04-18 00:01:49,517 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/5
[2025-04-18 02:02:09] 2025-04-18 00:01:49,526 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-18 02:02:09] 2025-04-18 00:01:49,526 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-18 02:02:09] 2025-04-18 00:01:49,526 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-18 02:02:09] 2025-04-18 00:01:49,526 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-18 02:02:09] 2025-04-18 00:01:49,526 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-18 02:02:09] 2025-04-18 00:01:49,526 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-18 02:02:09] 2025-04-18 00:01:49,526 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-18 02:02:09] 2025-04-18 00:01:49,526 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-18 02:02:09] 2025-04-18 00:01:49,526 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-18 02:02:09] 2025-04-18 00:01:49,526 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-18 02:02:09] 2025-04-18 00:01:49,526 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-18 02:02:09] 2025-04-18 00:01:49,527 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-18 02:02:09] 2025-04-18 00:01:49,527 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-18 02:02:09] 2025-04-18 00:01:49,527 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-18 02:02:09] 2025-04-18 00:01:49,527 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-18 02:02:09] 2025-04-18 00:01:49,527 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-18 02:02:09] 2025-04-18 00:01:49,527 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-18 02:02:09] 2025-04-18 00:01:49,527 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-18 02:02:09] 2025-04-18 00:01:49,527 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-18 02:02:09] 2025-04-18 00:01:49,527 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-18 02:02:09] 2025-04-18 00:01:49,527 | INFO     | job 6605312497 has completed (purged errors)
[2025-04-18 02:02:09] 2025-04-18 00:01:49,527 | INFO     | overall cleanup function is called
[2025-04-18 02:02:09] 2025-04-18 00:01:50,533 | INFO     | --- collectZombieJob: --- 10, [333429]
[2025-04-18 02:02:09] 2025-04-18 00:01:50,533 | INFO     | zombie collector waiting for pid 333429
[2025-04-18 02:02:09] 2025-04-18 00:01:50,533 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-18 02:02:09] 2025-04-18 00:01:50,533 | INFO     | collected zombie processes
[2025-04-18 02:02:09] 2025-04-18 00:01:50,533 | INFO     | will attempt to kill all subprocesses of pid=333429
[2025-04-18 02:02:09] 2025-04-18 00:01:50,596 | INFO     | process IDs to be killed: [333429] (in reverse order)
[2025-04-18 02:02:09] 2025-04-18 00:01:50,615 | WARNING  | found no corresponding commands to process id(s)
[2025-04-18 02:02:09] 2025-04-18 00:01:50,615 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-18 02:02:09] 2025-04-18 00:01:50,617 | INFO     | did not find any defunct processes belonging to 333429
[2025-04-18 02:02:09] 2025-04-18 00:01:50,618 | INFO     | did not find any defunct processes belonging to 333429
[2025-04-18 02:02:09] 2025-04-18 00:01:50,618 | INFO     | ready for new job
[2025-04-18 02:02:09] 2025-04-18 00:01:50,619 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-18 02:02:09] 2025-04-18 00:01:50,619 | INFO     | **************************************
[2025-04-18 02:02:09] 2025-04-18 00:01:50,619 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-18 02:02:09] 2025-04-18 00:01:50,619 | INFO     | **************************************
[2025-04-18 02:02:09] 2025-04-18 00:01:50,619 | INFO     | 
[2025-04-18 02:02:09] 2025-04-18 00:01:50,620 | INFO     | architecture information:
[2025-04-18 02:02:09] 2025-04-18 00:01:50,620 | INFO     | executing command: cat /etc/os-release
[2025-04-18 02:02:09] 2025-04-18 00:01:50,626 | INFO     | cat /etc/os-release:
[2025-04-18 02:02:09] NAME="CentOS Linux"
[2025-04-18 02:02:09] VERSION="7 (Core)"
[2025-04-18 02:02:09] ID="centos"
[2025-04-18 02:02:09] ID_LIKE="rhel fedora"
[2025-04-18 02:02:09] VERSION_ID="7"
[2025-04-18 02:02:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-18 02:02:09] ANSI_COLOR="0;31"
[2025-04-18 02:02:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-18 02:02:09] HOME_URL="https://www.centos.org/"
[2025-04-18 02:02:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-18 02:02:09] 
[2025-04-18 02:02:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-18 02:02:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-18 02:02:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-18 02:02:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-18 02:02:09] 
[2025-04-18 02:02:09] 2025-04-18 00:01:50,626 | INFO     | **************************************
[2025-04-18 02:02:09] 2025-04-18 00:01:51,127 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/5
[2025-04-18 02:02:09] 2025-04-18 00:01:51,133 | INFO     | sufficient remaining disk space (21450719232 B)
[2025-04-18 02:02:09] 2025-04-18 00:01:51,133 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-18 02:02:09] 2025-04-18 00:01:51,134 | INFO     | current server update state: UPDATING_FINAL
[2025-04-18 02:02:09] 2025-04-18 00:01:51,134 | INFO     | update_server=False
[2025-04-18 02:02:09] 2025-04-18 00:01:51,134 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-18 02:02:09] 2025-04-18 00:01:51,134 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-18 02:02:09] 2025-04-18 00:01:51,134 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-18 02:02:09] 2025-04-18 00:01:51,134 | INFO     | aborting loop
[2025-04-18 02:02:09] 2025-04-18 00:01:51,234 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-18 02:02:09] 2025-04-18 00:01:51,436 | INFO     | all payload control threads have been joined
[2025-04-18 02:02:09] 2025-04-18 00:01:51,653 | INFO     | found 0 job(s) in 20 queues
[2025-04-18 02:02:09] 2025-04-18 00:01:51,653 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-18 02:02:09] 2025-04-18 00:01:51,653 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-18 02:02:09] 2025-04-18 00:01:52,011 | INFO     | all data control threads have been joined
[2025-04-18 02:02:09] 2025-04-18 00:01:52,108 | INFO     | all job control threads have been joined
[2025-04-18 02:02:09] 2025-04-18 00:01:52,136 | INFO     | [job] retrieve thread has finished
[2025-04-18 02:02:09] 2025-04-18 00:01:52,136 | INFO     | [job] job monitor thread has finished
[2025-04-18 02:02:09] 2025-04-18 00:01:52,136 | INFO     | [job] queue monitor thread has finished
[2025-04-18 02:02:09] 2025-04-18 00:01:52,306 | INFO     | [payload] failed_post thread has finished
[2025-04-18 02:02:09] 2025-04-18 00:01:52,441 | INFO     | [payload] control thread has finished
[2025-04-18 02:02:09] 2025-04-18 00:01:52,561 | INFO     | [payload] execute_payloads thread has finished
[2025-04-18 02:02:09] 2025-04-18 00:01:53,016 | INFO     | [data] control thread has finished
[2025-04-18 02:02:09] 2025-04-18 00:01:53,114 | INFO     | [job] control thread has finished
[2025-04-18 02:02:09] 2025-04-18 00:01:53,226 | INFO     | [payload] validate_post thread has finished
[2025-04-18 02:02:09] 2025-04-18 00:01:53,236 | INFO     | [data] copytool_out thread has finished
[2025-04-18 02:02:09] 2025-04-18 00:01:53,416 | INFO     | [job] validate thread has finished
[2025-04-18 02:02:09] 2025-04-18 00:01:53,581 | INFO     | [job] create_data_payload thread has finished
[2025-04-18 02:02:09] 2025-04-18 00:01:53,627 | INFO     | [payload] validate_pre thread has finished
[2025-04-18 02:02:09] 2025-04-18 00:01:53,636 | INFO     | [data] copytool_in thread has finished
[2025-04-18 02:02:09] 2025-04-18 00:01:54,132 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-18 02:02:09] 2025-04-18 00:01:58,136 | INFO     | [data] queue_monitor thread has finished
[2025-04-18 02:02:09] 2025-04-18 00:02:01,486 | INFO     | job.realtimelogging is not enabled
[2025-04-18 02:02:09] 2025-04-18 00:02:02,491 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-18 02:02:09] 2025-04-18 00:02:04,111 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140375953942336)>', '<ExcThread(monitor, started 140375410853632)>']
[2025-04-18 02:02:09] 2025-04-18 00:02:04,711 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-18 02:02:09] 2025-04-18 00:02:04,711 | INFO     | [monitor] control thread has ended
[2025-04-18 02:02:09] 2025-04-18 00:02:09,137 | INFO     | all workflow threads have been joined
[2025-04-18 02:02:09] 2025-04-18 00:02:09,137 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-18 02:02:09] 2025-04-18 00:02:09,137 | INFO     | traces error code: 0
[2025-04-18 02:02:09] 2025-04-18 00:02:09,137 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-18 02:02:09] 2025-04-18 00:02:09,197 [wrapper] ==== pilot stdout END ====
[2025-04-18 02:02:09] 2025-04-18 00:02:09,198 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-18 02:02:09] 2025-04-18 00:02:09,200 [wrapper] pilotpid: 326541
[2025-04-18 02:02:09] 2025-04-18 00:02:09,201 [wrapper] Pilot exit status: 0
[2025-04-18 02:02:09] 2025-04-18 00:02:09,207 [wrapper] pandaids: 6605312497
[2025-04-18 02:02:09] 2025-04-18 00:02:09,216 [wrapper] cleanup supervisor_pilot  351264 326542
[2025-04-18 02:02:09] 2025-04-18 00:02:09,217 [wrapper] Test setup, not cleaning
[2025-04-18 02:02:09] 2025-04-18 00:02:09,217 [wrapper] apfmon messages muted
[2025-04-18 02:02:09] 2025-04-18 00:02:09,218 [wrapper] ==== wrapper stdout END ====
[2025-04-18 02:02:09] 2025-04-18 00:02:09,219 [wrapper] ==== wrapper stderr END ====
[2025-04-18 02:02:09]  *** Error codes and diagnostics ***
[2025-04-18 02:02:09]     "exeErrorCode": 0,
[2025-04-18 02:02:09]     "exeErrorDiag": "",
[2025-04-18 02:02:09]     "pilotErrorCode": 0,
[2025-04-18 02:02:09]     "pilotErrorDiag": "",
[2025-04-18 02:02:09]  *** Listing of results directory ***
[2025-04-18 02:02:09] total 421004
[2025-04-18 02:02:09] -rw-r--r-- 1 boinc boinc    495897 Apr 17 12:44 pilot3.tar.gz
[2025-04-18 02:02:09] -rwx------ 1 boinc boinc     37140 Apr 17 12:58 runpilot2-wrapper.sh
[2025-04-18 02:02:09] -rw-r--r-- 1 boinc boinc      5111 Apr 17 12:58 queuedata.json
[2025-04-18 02:02:09] -rw-r--r-- 1 boinc boinc       100 Apr 18 00:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-18 02:02:09] -rwxr-xr-x 1 boinc boinc      7986 Apr 18 00:47 run_atlas
[2025-04-18 02:02:09] -rw-r--r-- 1 boinc boinc       105 Apr 18 00:47 job.xml
[2025-04-18 02:02:09] -rw-r--r-- 2 boinc boinc     17569 Apr 18 00:47 start_atlas.sh
[2025-04-18 02:02:09] drwxrwx--x 2 boinc boinc         5 Apr 18 00:47 shared
[2025-04-18 02:02:09] -rw-r--r-- 2 boinc boinc    508892 Apr 18 00:47 input.tar.gz
[2025-04-18 02:02:09] -rw-r--r-- 1 boinc boinc      7839 Apr 18 00:47 init_data.xml
[2025-04-18 02:02:09] -rw-r--r-- 2 boinc boinc 227516729 Apr 18 00:47 EVNT.44075481._002128.pool.root.1
[2025-04-18 02:02:09] -rw-r--r-- 1 boinc boinc         0 Apr 18 00:47 boinc_lockfile
[2025-04-18 02:02:09] -rw-r--r-- 1 boinc boinc      2579 Apr 18 00:47 pandaJob.out
[2025-04-18 02:02:09] -rw------- 1 boinc boinc       466 Apr 18 00:47 setup.sh.local
[2025-04-18 02:02:09] -rw------- 1 boinc boinc    990266 Apr 18 00:47 agis_schedconf.cvmfs.json
[2025-04-18 02:02:09] -rw------- 1 boinc boinc   1618536 Apr 18 00:47 agis_ddmendpoints.agis.ALL.json
[2025-04-18 02:02:09] drwx------ 4 boinc boinc        20 Apr 18 00:47 pilot3
[2025-04-18 02:02:09] -rw------- 1 boinc boinc        95 Apr 18 02:01 pilot_heartbeat.json
[2025-04-18 02:02:09] -rw------- 1 boinc boinc 201780987 Apr 18 02:01 HITS.44075483._054718.pool.root.1
[2025-04-18 02:02:09] -rw------- 1 boinc boinc      1032 Apr 18 02:01 memory_monitor_summary.json
[2025-04-18 02:02:09] -rw-r--r-- 1 boinc boinc        27 Apr 18 02:01 wrapper_checkpoint.txt
[2025-04-18 02:02:09] -rw-r--r-- 1 boinc boinc      8192 Apr 18 02:01 boinc_mmap_file
[2025-04-18 02:02:09] -rw------- 1 boinc boinc    272584 Apr 18 02:01 log.44075483._054718.job.log.tgz.1
[2025-04-18 02:02:09] -rw-r--r-- 1 boinc boinc       529 Apr 18 02:01 boinc_task_state.xml
[2025-04-18 02:02:09] -rw------- 1 boinc boinc      7680 Apr 18 02:01 heartbeat.json
[2025-04-18 02:02:09] -rw------- 1 boinc boinc      4432 Apr 18 02:02 pilotlog.txt
[2025-04-18 02:02:09] -rw------- 1 boinc boinc    440744 Apr 18 02:02 log.44075483._054718.job.log.1
[2025-04-18 02:02:09] -rw-r--r-- 1 boinc boinc     11539 Apr 18 02:02 runtime_log.err
[2025-04-18 02:02:09] -rw-r--r-- 1 boinc boinc       620 Apr 18 02:02 runtime_log
[2025-04-18 02:02:09] -rw------- 1 boinc boinc    727040 Apr 18 02:02 result.tar.gz
[2025-04-18 02:02:09] -rw------- 1 boinc boinc       657 Apr 18 02:02 qTyNDmA8bP7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmfjcLDm9n0NBo.diag
[2025-04-18 02:02:09] -rw------- 1 boinc boinc       357 Apr 18 02:02 output.list
[2025-04-18 02:02:09] -rw-r--r-- 1 boinc boinc     21153 Apr 18 02:02 stderr.txt
[2025-04-18 02:02:09] HITS file was successfully produced:
[2025-04-18 02:02:09] -rw------- 1 boinc boinc 201780987 Apr 18 02:01 shared/HITS.pool.root.1
[2025-04-18 02:02:09]  *** Contents of shared directory: ***
[2025-04-18 02:02:09] total 420016
[2025-04-18 02:02:09] -rw-r--r-- 2 boinc boinc     17569 Apr 18 00:47 start_atlas.sh
[2025-04-18 02:02:09] -rw-r--r-- 2 boinc boinc    508892 Apr 18 00:47 input.tar.gz
[2025-04-18 02:02:09] -rw-r--r-- 2 boinc boinc 227516729 Apr 18 00:47 ATLAS.root_0
[2025-04-18 02:02:09] -rw------- 1 boinc boinc 201780987 Apr 18 02:01 HITS.pool.root.1
[2025-04-18 02:02:09] -rw------- 1 boinc boinc    727040 Apr 18 02:02 result.tar.gz
02:02:11 (322785): run_atlas exited; CPU time 24177.607326
02:02:11 (322785): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN