Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:52:49 (1083832): wrapper (7.7.26015): starting
16:52:49 (1083832): wrapper: running run_atlas (--nthreads 10)
[2025-04-17 16:52:49] Arguments: --nthreads 10
[2025-04-17 16:52:49] Threads: 10
[2025-04-17 16:52:49] Checking for CVMFS
[2025-04-17 16:52:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-17 16:52:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-17 16:52:51] Running cvmfs_config stat atlas.cern.ch
[2025-04-17 16:52:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-17 16:52:53] 2.12.6.0 1587938 173191 239968 144977 1 388 22331096 32935936 19117 130560 0 81252402 99.583 99729201 25409 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-04-17 16:52:53] CVMFS is ok
[2025-04-17 16:52:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-17 16:52:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-17 16:52:53] Further information can be found at the LHC@home message board.
[2025-04-17 16:52:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-17 16:52:53] Checking for apptainer binary...
[2025-04-17 16:52:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-17 16:52:53] Running /usr/bin/apptainer --version
[2025-04-17 16:52:53] apptainer version 1.4.0-1.el9
[2025-04-17 16:52:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-17 16:52:55] c-4-39.aglt2.org
[2025-04-17 16:52:55] apptainer works
[2025-04-17 16:52:55] Set ATHENA_PROC_NUMBER=10
[2025-04-17 16:52:55] Set ATHENA_CORE_NUMBER=10
[2025-04-17 16:52:55] Starting ATLAS job with PandaID=6605744163
[2025-04-17 16:52:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-18 08:34:44]  *** The last 200 lines of the pilot log: ***
[2025-04-18 08:34:44] 2025-04-18 12:34:02,553 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-18 08:34:44] 2025-04-18 12:34:05,076 | INFO     | monitor loop #2746: job 0:6605744163 is in state 'finished'
[2025-04-18 08:34:44] 2025-04-18 12:34:05,105 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-18 08:34:44] 2025-04-18 12:34:06,583 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-18 08:34:44] 2025-04-18 12:34:06,583 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6605744163/memory_monitor_summary.json (trf name=prmon)
[2025-04-18 08:34:44] 2025-04-18 12:34:06,584 | INFO     | extracted standard info from prmon json
[2025-04-18 08:34:44] 2025-04-18 12:34:06,584 | INFO     | extracted standard memory fields from prmon json
[2025-04-18 08:34:44] 2025-04-18 12:34:06,584 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-18 08:34:44] 2025-04-18 12:34:06,597 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-18 08:34:44] 2025-04-18 12:34:06,597 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-18 08:34:44] 2025-04-18 12:34:06,724 | INFO     | fitting pss+swap vs Time
[2025-04-18 08:34:44] 2025-04-18 12:34:06,725 | INFO     | sum of square deviations: 241444161969.56094
[2025-04-18 08:34:44] 2025-04-18 12:34:07,035 | INFO     | sum of deviations: 366770061062.0212
[2025-04-18 08:34:44] 2025-04-18 12:34:07,035 | INFO     | mean x: 1744951522.1934783
[2025-04-18 08:34:44] 2025-04-18 12:34:07,035 | INFO     | mean y: 2110800.836956522
[2025-04-18 08:34:44] 2025-04-18 12:34:07,035 | INFO     | -- intersect: -2648588934.971332
[2025-04-18 08:34:44] 2025-04-18 12:34:07,035 | INFO     | intersect: -2648588934.971332
[2025-04-18 08:34:44] 2025-04-18 12:34:07,037 | INFO     | chi2: 12.935259306977319
[2025-04-18 08:34:44] 2025-04-18 12:34:07,038 | INFO     | sum of square deviations: 237528897097.14334
[2025-04-18 08:34:44] 2025-04-18 12:34:07,181 | INFO     | sum of deviations: 573058614184.8591
[2025-04-18 08:34:44] 2025-04-18 12:34:07,181 | INFO     | mean x: 1744951369.6972678
[2025-04-18 08:34:44] 2025-04-18 12:34:07,245 | INFO     | mean y: 2118829.1836065575
[2025-04-18 08:34:44] 2025-04-18 12:34:07,245 | INFO     | -- intersect: -4207724377.092596
[2025-04-18 08:34:44] 2025-04-18 12:34:07,245 | INFO     | intersect: -4207724377.092596
[2025-04-18 08:34:44] 2025-04-18 12:34:07,246 | INFO     | chi2: 10.109982854428171
[2025-04-18 08:34:44] 2025-04-18 12:34:07,247 | INFO     | current chi2=10.109982854428171 (change=21.841668462148142 %)
[2025-04-18 08:34:44] 2025-04-18 12:34:07,247 | INFO     | right removable region: 914
[2025-04-18 08:34:44] 2025-04-18 12:34:07,248 | INFO     | sum of square deviations: 237528507917.14328
[2025-04-18 08:34:44] 2025-04-18 12:34:07,274 | INFO     | sum of deviations: 129028214063.50613
[2025-04-18 08:34:44] 2025-04-18 12:34:07,275 | INFO     | mean x: 1744951674.6972678
[2025-04-18 08:34:44] 2025-04-18 12:34:07,275 | INFO     | mean y: 2120055.8032786883
[2025-04-18 08:34:44] 2025-04-18 12:34:07,276 | INFO     | -- intersect: -945757738.6880276
[2025-04-18 08:34:44] 2025-04-18 12:34:07,276 | INFO     | intersect: -945757738.6880276
[2025-04-18 08:34:44] 2025-04-18 12:34:07,278 | INFO     | chi2: 9.46740880874334
[2025-04-18 08:34:44] 2025-04-18 12:34:07,278 | INFO     | current chi2=9.46740880874334 (change=26.809284730483984 %)
[2025-04-18 08:34:44] 2025-04-18 12:34:07,279 | INFO     | sum of square deviations: 233655636063.79016
[2025-04-18 08:34:44] 2025-04-18 12:34:07,304 | INFO     | sum of deviations: -42261128656.95459
[2025-04-18 08:34:44] 2025-04-18 12:34:07,304 | INFO     | mean x: 1744951827.1967032
[2025-04-18 08:34:44] 2025-04-18 12:34:07,305 | INFO     | mean y: 2126799.7483516484
[2025-04-18 08:34:44] 2025-04-18 12:34:07,305 | INFO     | -- intersect: 317734995.2605505
[2025-04-18 08:34:44] 2025-04-18 12:34:07,305 | INFO     | intersect: 317734995.2605505
[2025-04-18 08:34:44] 2025-04-18 12:34:07,306 | INFO     | chi2: 7.710166441871743
[2025-04-18 08:34:44] 2025-04-18 12:34:07,306 | INFO     | current chi2=7.710166441871743 (change=18.560964276188734 %)
[2025-04-18 08:34:44] 2025-04-18 12:34:07,307 | INFO     | left removable region: 20
[2025-04-18 08:34:44] 2025-04-18 12:34:07,308 | INFO     | sum of square deviations: 221545873538.55963
[2025-04-18 08:34:44] 2025-04-18 12:34:07,329 | INFO     | sum of deviations: -126451600397.23726
[2025-04-18 08:34:44] 2025-04-18 12:34:07,329 | INFO     | mean x: 1744951949.1991053
[2025-04-18 08:34:44] 2025-04-18 12:34:07,329 | INFO     | mean y: 2147274.7035794184
[2025-04-18 08:34:44] 2025-04-18 12:34:07,329 | INFO     | -- intersect: 998112413.0662285
[2025-04-18 08:34:44] 2025-04-18 12:34:07,329 | INFO     | intersect: 998112413.0662285
[2025-04-18 08:34:44] 2025-04-18 12:34:07,331 | INFO     | chi2: 2.154690316480525
[2025-04-18 08:34:44] 2025-04-18 12:34:07,331 | INFO     | -- intersect: 998112413.0662285
[2025-04-18 08:34:44] 2025-04-18 12:34:07,331 | INFO     | current memory leak: -0.57 B/s (using 894 data points, chi2=2.15)
[2025-04-18 08:34:44] 2025-04-18 12:34:07,332 | INFO     | ..............................
[2025-04-18 08:34:44] 2025-04-18 12:34:07,332 | INFO     | . Timing measurements:
[2025-04-18 08:34:44] 2025-04-18 12:34:07,333 | INFO     | . get job = 1 s
[2025-04-18 08:34:44] 2025-04-18 12:34:07,333 | INFO     | . initial setup = 11 s
[2025-04-18 08:34:44] 2025-04-18 12:34:07,333 | INFO     | . payload setup = 63 s
[2025-04-18 08:34:44] 2025-04-18 12:34:07,333 | INFO     | . stage-in = 0 s
[2025-04-18 08:34:44] 2025-04-18 12:34:07,333 | INFO     | . payload execution = 56138 s
[2025-04-18 08:34:44] 2025-04-18 12:34:07,333 | INFO     | . stage-out = 7 s
[2025-04-18 08:34:44] 2025-04-18 12:34:07,333 | INFO     | . log creation = 0 s
[2025-04-18 08:34:44] 2025-04-18 12:34:07,333 | INFO     | ..............................
[2025-04-18 08:34:44] 2025-04-18 12:34:07,887 | INFO     | 56384s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-04-18 08:34:44] 2025-04-18 12:34:08,038 | INFO     | 
[2025-04-18 08:34:44] 2025-04-18 12:34:08,039 | INFO     | job summary report
[2025-04-18 08:34:44] 2025-04-18 12:34:08,039 | INFO     | --------------------------------------------------
[2025-04-18 08:34:44] 2025-04-18 12:34:08,039 | INFO     | PanDA job id: 6605744163
[2025-04-18 08:34:44] 2025-04-18 12:34:08,039 | INFO     | task id: 44075483
[2025-04-18 08:34:44] 2025-04-18 12:34:08,039 | INFO     | errors: (none)
[2025-04-18 08:34:44] 2025-04-18 12:34:08,039 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-18 08:34:44] 2025-04-18 12:34:08,040 | INFO     | pilot state: finished 
[2025-04-18 08:34:44] 2025-04-18 12:34:08,040 | INFO     | transexitcode: 0
[2025-04-18 08:34:44] 2025-04-18 12:34:08,040 | INFO     | exeerrorcode: 0
[2025-04-18 08:34:44] 2025-04-18 12:34:08,040 | INFO     | exeerrordiag: 
[2025-04-18 08:34:44] 2025-04-18 12:34:08,040 | INFO     | exitcode: 0
[2025-04-18 08:34:44] 2025-04-18 12:34:08,040 | INFO     | exitmsg: OK
[2025-04-18 08:34:44] 2025-04-18 12:34:08,040 | INFO     | cpuconsumptiontime: 52000 s
[2025-04-18 08:34:44] 2025-04-18 12:34:08,040 | INFO     | nevents: 400
[2025-04-18 08:34:44] 2025-04-18 12:34:08,041 | INFO     | neventsw: 0
[2025-04-18 08:34:44] 2025-04-18 12:34:08,041 | INFO     | pid: 1124550
[2025-04-18 08:34:44] 2025-04-18 12:34:08,041 | INFO     | pgrp: 1124550
[2025-04-18 08:34:44] 2025-04-18 12:34:08,041 | INFO     | corecount: 10
[2025-04-18 08:34:44] 2025-04-18 12:34:08,041 | INFO     | event service: False
[2025-04-18 08:34:44] 2025-04-18 12:34:08,057 | INFO     | sizes: {0: 2426653, 1: 2426852, 13: 2426852, 25: 2426908, 37: 2426936, 49: 2427298, 60: 2427326, 56205: 2474608, 56206: 2474607, 56216: 2483604, 56217: 2483660, 56
[2025-04-18 08:34:44] 2025-04-18 12:34:08,057 | INFO     | --------------------------------------------------
[2025-04-18 08:34:44] 2025-04-18 12:34:08,057 | INFO     | 
[2025-04-18 08:34:44] 2025-04-18 12:34:08,057 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-04-18 08:34:44] 2025-04-18 12:34:08,167 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-18 08:34:44] 2025-04-18 12:34:08,167 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-18 08:34:44] 2025-04-18 12:34:08,168 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-18 08:34:44] 2025-04-18 12:34:08,168 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-18 08:34:44] 2025-04-18 12:34:08,168 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-18 08:34:44] 2025-04-18 12:34:08,168 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-18 08:34:44] 2025-04-18 12:34:08,168 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-18 08:34:44] 2025-04-18 12:34:08,168 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-18 08:34:44] 2025-04-18 12:34:08,168 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-18 08:34:44] 2025-04-18 12:34:08,168 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-18 08:34:44] 2025-04-18 12:34:08,168 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-18 08:34:44] 2025-04-18 12:34:08,168 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-18 08:34:44] 2025-04-18 12:34:08,169 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-18 08:34:44] 2025-04-18 12:34:08,169 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-18 08:34:44] 2025-04-18 12:34:08,169 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-18 08:34:44] 2025-04-18 12:34:08,169 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-18 08:34:44] 2025-04-18 12:34:08,169 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-18 08:34:44] 2025-04-18 12:34:08,169 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-18 08:34:44] 2025-04-18 12:34:08,169 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-18 08:34:44] 2025-04-18 12:34:08,169 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-18 08:34:44] 2025-04-18 12:34:08,170 | INFO     | job 6605744163 has completed (purged errors)
[2025-04-18 08:34:44] 2025-04-18 12:34:08,170 | INFO     | overall cleanup function is called
[2025-04-18 08:34:44] 2025-04-18 12:34:09,190 | INFO     | --- collectZombieJob: --- 10, [1124550]
[2025-04-18 08:34:44] 2025-04-18 12:34:09,191 | INFO     | zombie collector waiting for pid 1124550
[2025-04-18 08:34:44] 2025-04-18 12:34:09,191 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-18 08:34:44] 2025-04-18 12:34:09,191 | INFO     | collected zombie processes
[2025-04-18 08:34:44] 2025-04-18 12:34:09,191 | INFO     | will attempt to kill all subprocesses of pid=1124550
[2025-04-18 08:34:44] 2025-04-18 12:34:10,540 | INFO     | process IDs to be killed: [1124550] (in reverse order)
[2025-04-18 08:34:44] 2025-04-18 12:34:10,687 | WARNING  | found no corresponding commands to process id(s)
[2025-04-18 08:34:44] 2025-04-18 12:34:10,699 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-18 08:34:44] 2025-04-18 12:34:10,777 | INFO     | did not find any defunct processes belonging to 1124550
[2025-04-18 08:34:44] 2025-04-18 12:34:10,976 | INFO     | did not find any defunct processes belonging to 1124550
[2025-04-18 08:34:44] 2025-04-18 12:34:10,977 | INFO     | ready for new job
[2025-04-18 08:34:44] 2025-04-18 12:34:10,977 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-18 08:34:44] 2025-04-18 12:34:11,065 | INFO     | **************************************
[2025-04-18 08:34:44] 2025-04-18 12:34:11,065 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-18 08:34:44] 2025-04-18 12:34:11,065 | INFO     | **************************************
[2025-04-18 08:34:44] 2025-04-18 12:34:11,066 | INFO     | 
[2025-04-18 08:34:44] 2025-04-18 12:34:11,102 | INFO     | architecture information:
[2025-04-18 08:34:44] 2025-04-18 12:34:11,160 | INFO     | executing command: cat /etc/os-release
[2025-04-18 08:34:44] 2025-04-18 12:34:11,522 | INFO     | cat /etc/os-release:
[2025-04-18 08:34:44] NAME="CentOS Linux"
[2025-04-18 08:34:44] VERSION="7 (Core)"
[2025-04-18 08:34:44] ID="centos"
[2025-04-18 08:34:44] ID_LIKE="rhel fedora"
[2025-04-18 08:34:44] VERSION_ID="7"
[2025-04-18 08:34:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-18 08:34:44] ANSI_COLOR="0;31"
[2025-04-18 08:34:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-18 08:34:44] HOME_URL="https://www.centos.org/"
[2025-04-18 08:34:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-18 08:34:44] 
[2025-04-18 08:34:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-18 08:34:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-18 08:34:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-18 08:34:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-18 08:34:44] 
[2025-04-18 08:34:44] 2025-04-18 12:34:11,535 | INFO     | **************************************
[2025-04-18 08:34:44] 2025-04-18 12:34:12,049 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-04-18 08:34:44] 2025-04-18 12:34:12,429 | INFO     | sufficient remaining disk space (75912708096 B)
[2025-04-18 08:34:44] 2025-04-18 12:34:12,430 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-18 08:34:44] 2025-04-18 12:34:12,430 | INFO     | current server update state: UPDATING_FINAL
[2025-04-18 08:34:44] 2025-04-18 12:34:12,430 | INFO     | update_server=False
[2025-04-18 08:34:44] 2025-04-18 12:34:12,430 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-18 08:34:44] 2025-04-18 12:34:12,559 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-18 08:34:44] 2025-04-18 12:34:12,639 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-18 08:34:44] 2025-04-18 12:34:12,719 | INFO     | all payload control threads have been joined
[2025-04-18 08:34:44] 2025-04-18 12:34:12,720 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-04-18 08:34:44] 2025-04-18 12:34:12,720 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-04-18 08:34:44] 2025-04-18 12:34:12,720 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-18 08:34:44] 2025-04-18 12:34:12,720 | INFO     | will abort loop
[2025-04-18 08:34:44] 2025-04-18 12:34:13,357 | INFO     | all data control threads have been joined
[2025-04-18 08:34:44] 2025-04-18 12:34:13,406 | INFO     | all job control threads have been joined
[2025-04-18 08:34:44] 2025-04-18 12:34:13,442 | INFO     | [job] retrieve thread has finished
[2025-04-18 08:34:44] 2025-04-18 12:34:13,444 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-18 08:34:44] 2025-04-18 12:34:13,572 | INFO     | [job] validate thread has finished
[2025-04-18 08:34:44] 2025-04-18 12:34:13,673 | INFO     | [job] queue monitor thread has finished
[2025-04-18 08:34:44] 2025-04-18 12:34:13,694 | INFO     | [payload] validate_post thread has finished
[2025-04-18 08:34:44] 2025-04-18 12:34:13,725 | INFO     | [payload] control thread has finished
[2025-04-18 08:34:44] 2025-04-18 12:34:13,727 | INFO     | [job] job monitor thread has finished
[2025-04-18 08:34:44] 2025-04-18 12:34:13,874 | INFO     | [payload] validate_pre thread has finished
[2025-04-18 08:34:44] 2025-04-18 12:34:13,878 | INFO     | [data] copytool_in thread has finished
[2025-04-18 08:34:44] 2025-04-18 12:34:14,375 | INFO     | [payload] execute_payloads thread has finished
[2025-04-18 08:34:44] 2025-04-18 12:34:14,493 | INFO     | [job] control thread has finished
[2025-04-18 08:34:44] 2025-04-18 12:34:14,501 | INFO     | [data] control thread has finished
[2025-04-18 08:34:44] 2025-04-18 12:34:14,581 | INFO     | PID=1098032 has CPU usage=6.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-04-18 08:34:44] 2025-04-18 12:34:14,581 | INFO     | .. there are 42 such processes running
[2025-04-18 08:34:44] 2025-04-18 12:34:14,582 | INFO     | found 0 job(s) in 20 queues
[2025-04-18 08:34:44] 2025-04-18 12:34:14,582 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-18 08:34:44] 2025-04-18 12:34:14,582 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-18 08:34:44] 2025-04-18 12:34:14,810 | INFO     | [job] create_data_payload thread has finished
[2025-04-18 08:34:44] 2025-04-18 12:34:14,822 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-18 08:34:44] 2025-04-18 12:34:14,838 | INFO     | [payload] failed_post thread has finished
[2025-04-18 08:34:44] 2025-04-18 12:34:15,499 | INFO     | [data] copytool_out thread has finished
[2025-04-18 08:34:44] 2025-04-18 12:34:16,576 | INFO     | [data] queue_monitor thread has finished
[2025-04-18 08:34:44] 2025-04-18 12:34:16,838 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139944834635584)>', '<ExcThread(monitor, started 139944479659776)>']
[2025-04-18 08:34:44] 2025-04-18 12:34:17,607 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-18 08:34:44] 2025-04-18 12:34:17,608 | INFO     | [monitor] control thread has ended
[2025-04-18 08:34:44] 2025-04-18 12:34:21,863 | INFO     | all workflow threads have been joined
[2025-04-18 08:34:44] 2025-04-18 12:34:21,864 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-18 08:34:44] 2025-04-18 12:34:21,864 | INFO     | traces error code: 0
[2025-04-18 08:34:44] 2025-04-18 12:34:21,865 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-18 08:34:44] 2025-04-18 12:34:22,580 [wrapper] ==== pilot stdout END ====
[2025-04-18 08:34:44] 2025-04-18 12:34:22,657 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-18 08:34:44] 2025-04-18 12:34:22,701 [wrapper] pilotpid: 1098032
[2025-04-18 08:34:44] 2025-04-18 12:34:22,794 [wrapper] Pilot exit status: 0
[2025-04-18 08:34:44] 2025-04-18 12:34:22,954 [wrapper] pandaids: 6605744163
[2025-04-18 08:34:44] 2025-04-18 12:34:24,617 [wrapper] cleanup supervisor_pilot 2042002 1098033
[2025-04-18 08:34:44] 2025-04-18 12:34:24,644 [wrapper] Test setup, not cleaning
[2025-04-18 08:34:44] 2025-04-18 12:34:24,709 [wrapper] apfmon messages muted
[2025-04-18 08:34:44] 2025-04-18 12:34:24,744 [wrapper] ==== wrapper stdout END ====
[2025-04-18 08:34:44] 2025-04-18 12:34:24,756 [wrapper] ==== wrapper stderr END ====
[2025-04-18 08:34:44]  *** Error codes and diagnostics ***
[2025-04-18 08:34:44]     "exeErrorCode": 0,
[2025-04-18 08:34:44]     "exeErrorDiag": "",
[2025-04-18 08:34:44]     "pilotErrorCode": 0,
[2025-04-18 08:34:44]     "pilotErrorDiag": "",
[2025-04-18 08:34:44]  *** Listing of results directory ***
[2025-04-18 08:34:44] total 420852
[2025-04-18 08:34:44] -rw-r--r--. 1 boincer umatlas    495897 Apr 17 13:22 pilot3.tar.gz
[2025-04-18 08:34:44] -rw-r--r--. 1 boincer umatlas      5111 Apr 17 13:26 queuedata.json
[2025-04-18 08:34:44] -rwx------. 1 boincer umatlas     37140 Apr 17 13:27 runpilot2-wrapper.sh
[2025-04-18 08:34:44] -rw-r--r--. 1 boincer umatlas       100 Apr 17 16:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-18 08:34:44] -rwxr-xr-x. 1 boincer umatlas      7986 Apr 17 16:52 run_atlas
[2025-04-18 08:34:44] -rw-r--r--. 1 boincer umatlas       105 Apr 17 16:52 job.xml
[2025-04-18 08:34:44] -rw-r--r--. 2 boincer umatlas 225695259 Apr 17 16:52 EVNT.44075481._002277.pool.root.1
[2025-04-18 08:34:44] -rw-r--r--. 2 boincer umatlas     17569 Apr 17 16:52 start_atlas.sh
[2025-04-18 08:34:44] drwxrwx--x. 2 boincer umatlas      4096 Apr 17 16:52 shared
[2025-04-18 08:34:44] -rw-r--r--. 2 boincer umatlas    508889 Apr 17 16:52 input.tar.gz
[2025-04-18 08:34:44] -rw-r--r--. 1 boincer umatlas         0 Apr 17 16:52 boinc_lockfile
[2025-04-18 08:34:44] -rw-r--r--. 1 boincer umatlas      2579 Apr 17 16:52 pandaJob.out
[2025-04-18 08:34:44] -rw-------. 1 boincer umatlas       467 Apr 17 16:52 setup.sh.local
[2025-04-18 08:34:44] -rw-------. 1 boincer umatlas    990274 Apr 17 16:54 agis_schedconf.cvmfs.json
[2025-04-18 08:34:44] drwx------. 4 boincer umatlas      4096 Apr 17 16:54 pilot3
[2025-04-18 08:34:44] -rw-------. 1 boincer umatlas 192097419 Apr 18 08:28 HITS.44075483._058569.pool.root.1
[2025-04-18 08:34:44] -rw-r--r--. 1 boincer umatlas       531 Apr 18 08:29 boinc_task_state.xml
[2025-04-18 08:34:44] -rw-r--r--. 1 boincer umatlas      6674 Apr 18 08:31 init_data.xml
[2025-04-18 08:34:44] -rw-------. 1 boincer umatlas      1048 Apr 18 08:33 memory_monitor_summary.json
[2025-04-18 08:34:44] -rw-------. 1 boincer umatlas   1618536 Apr 18 08:33 agis_ddmendpoints.agis.ALL.json
[2025-04-18 08:34:44] -rw-------. 1 boincer umatlas    755274 Apr 18 08:33 log.44075483._058569.job.log.tgz.1
[2025-04-18 08:34:44] -rw-------. 1 boincer umatlas        95 Apr 18 08:33 pilot_heartbeat.json
[2025-04-18 08:34:44] -rw-------. 1 boincer umatlas      7738 Apr 18 08:34 heartbeat.json
[2025-04-18 08:34:44] -rw-------. 1 boincer umatlas      4934 Apr 18 08:34 pilotlog.txt
[2025-04-18 08:34:44] -rw-------. 1 boincer umatlas   3892138 Apr 18 08:34 log.44075483._058569.job.log.1
[2025-04-18 08:34:44] -rw-------. 1 boincer umatlas       357 Apr 18 08:34 output.list
[2025-04-18 08:34:44] -rw-r--r--. 1 boincer umatlas       620 Apr 18 08:34 runtime_log
[2025-04-18 08:34:44] -rw-------. 1 boincer umatlas   4669440 Apr 18 08:34 result.tar.gz
[2025-04-18 08:34:44] -rw-r--r--. 1 boincer umatlas     11411 Apr 18 08:34 runtime_log.err
[2025-04-18 08:34:44] -rw-------. 1 boincer umatlas       658 Apr 18 08:34 qJeKDmnCiP7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmDPdLDmwSAZom.diag
[2025-04-18 08:34:44] -rw-r--r--. 1 boincer umatlas        28 Apr 18 08:34 wrapper_checkpoint.txt
[2025-04-18 08:34:44] -rw-r--r--. 1 boincer umatlas      8192 Apr 18 08:34 boinc_mmap_file
[2025-04-18 08:34:44] -rw-r--r--. 1 boincer umatlas     21276 Apr 18 08:34 stderr.txt
[2025-04-18 08:34:44] HITS file was successfully produced:
[2025-04-18 08:34:44] -rw-------. 1 boincer umatlas 192097419 Apr 18 08:28 shared/HITS.pool.root.1
[2025-04-18 08:34:44]  *** Contents of shared directory: ***
[2025-04-18 08:34:44] total 413088
[2025-04-18 08:34:44] -rw-r--r--. 2 boincer umatlas 225695259 Apr 17 16:52 ATLAS.root_0
[2025-04-18 08:34:44] -rw-r--r--. 2 boincer umatlas     17569 Apr 17 16:52 start_atlas.sh
[2025-04-18 08:34:44] -rw-r--r--. 2 boincer umatlas    508889 Apr 17 16:52 input.tar.gz
[2025-04-18 08:34:44] -rw-------. 1 boincer umatlas 192097419 Apr 18 08:28 HITS.pool.root.1
[2025-04-18 08:34:44] -rw-------. 1 boincer umatlas   4669440 Apr 18 08:34 result.tar.gz
08:34:46 (1083832): run_atlas exited; CPU time 54474.689380
08:34:46 (1083832): called boinc_finish(0)

</stderr_txt>
]]>

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