Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
16:19:13 (28045): wrapper (7.7.26015): starting
16:19:13 (28045): wrapper: running run_atlas (--nthreads 12)
[2025-04-17 16:19:13] Arguments: --nthreads 12
[2025-04-17 16:19:13] Threads: 12
[2025-04-17 16:19:13] Checking for CVMFS
[2025-04-17 16:19:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-17 16:19:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-17 16:19:13] Running cvmfs_config stat atlas.cern.ch
[2025-04-17 16:19:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-17 16:19:13] 2.11.2.0 24478 214684 99868 144977 0 59 12730651 18432001 3569 130560 0 20212463 99.091 48391550 31104 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-17 16:19:13] CVMFS is ok
[2025-04-17 16:19:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-17 16:19:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-17 16:19:13] Further information can be found at the LHC@home message board.
[2025-04-17 16:19:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-17 16:19:13] Checking for apptainer binary...
[2025-04-17 16:19:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-17 16:19:13] Running /usr/bin/apptainer --version
[2025-04-17 16:19:14] apptainer version 1.3.2-1.el7
[2025-04-17 16:19:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-17 16:19:15] c-206-10.aglt2.org
[2025-04-17 16:19:15] apptainer works
[2025-04-17 16:19:15] Set ATHENA_PROC_NUMBER=12
[2025-04-17 16:19:15] Set ATHENA_CORE_NUMBER=12
[2025-04-17 16:19:15] Starting ATLAS job with PandaID=6605744008
[2025-04-17 16:19:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
00:31:13 (8867): wrapper (7.7.26015): starting
00:31:13 (8867): wrapper: running run_atlas (--nthreads 12)
[2025-04-18 00:31:13] Arguments: --nthreads 12
[2025-04-18 00:31:13] Threads: 12
[2025-04-18 00:31:13] This job has been restarted, cleaning up previous attempt
[2025-04-18 00:31:13] Checking for CVMFS
[2025-04-18 00:31:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-18 00:31:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-18 00:31:14] Running cvmfs_config stat atlas.cern.ch
[2025-04-18 00:31:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-18 00:31:14] 2.11.2.0 24478 215176 97832 144990 1 47 17306410 18432000 3040 130560 0 20480422 99.095 51893352 32451 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-18 00:31:14] CVMFS is ok
[2025-04-18 00:31:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-18 00:31:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-18 00:31:14] Further information can be found at the LHC@home message board.
[2025-04-18 00:31:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-18 00:31:14] Checking for apptainer binary...
[2025-04-18 00:31:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-18 00:31:14] Running /usr/bin/apptainer --version
[2025-04-18 00:31:16] apptainer version 1.3.2-1.el7
[2025-04-18 00:31:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-18 00:31:20] c-206-10.aglt2.org
[2025-04-18 00:31:20] apptainer works
[2025-04-18 00:31:20] Set ATHENA_PROC_NUMBER=12
[2025-04-18 00:31:20] Set ATHENA_CORE_NUMBER=12
[2025-04-18 00:31:20] Starting ATLAS job with PandaID=6605744008
[2025-04-18 00:31:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-18 09:17:18]  *** The last 200 lines of the pilot log: ***
[2025-04-18 09:17:18] 2025-04-18 13:16:57,597 | INFO     | intersect: -9291825003.831285
[2025-04-18 09:17:18] 2025-04-18 13:16:57,597 | INFO     | chi2: 2.9015236060820566
[2025-04-18 09:17:18] 2025-04-18 13:16:57,598 | INFO     | current chi2=2.9015236060820566 (change=51.25493447951549 %)
[2025-04-18 09:17:18] 2025-04-18 13:16:57,598 | INFO     | sum of square deviations: 39936192698.84365
[2025-04-18 09:17:18] 2025-04-18 13:16:57,603 | INFO     | sum of deviations: 108434492193.9286
[2025-04-18 09:17:18] 2025-04-18 13:16:57,603 | INFO     | mean x: 1744966773.1346536
[2025-04-18 09:17:18] 2025-04-18 13:16:57,603 | INFO     | mean y: 2653364.7069306932
[2025-04-18 09:17:18] 2025-04-18 13:16:57,603 | INFO     | -- intersect: -4735269134.991271
[2025-04-18 09:17:18] 2025-04-18 13:16:57,604 | INFO     | intersect: -4735269134.991271
[2025-04-18 09:17:18] 2025-04-18 13:16:57,604 | INFO     | chi2: 1.4147923975385994
[2025-04-18 09:17:18] 2025-04-18 13:16:57,604 | INFO     | current chi2=1.4147923975385994 (change=51.239673026510324 %)
[2025-04-18 09:17:18] 2025-04-18 13:16:57,605 | INFO     | sum of square deviations: 38761570654.63223
[2025-04-18 09:17:18] 2025-04-18 13:16:57,609 | INFO     | sum of deviations: 14215499194.864004
[2025-04-18 09:17:18] 2025-04-18 13:16:57,610 | INFO     | mean x: 1744966925.644
[2025-04-18 09:17:18] 2025-04-18 13:16:57,610 | INFO     | mean y: 2665586.488
[2025-04-18 09:17:18] 2025-04-18 13:16:57,610 | INFO     | -- intersect: -637287220.0578356
[2025-04-18 09:17:18] 2025-04-18 13:16:57,610 | INFO     | intersect: -637287220.0578356
[2025-04-18 09:17:18] 2025-04-18 13:16:57,610 | INFO     | chi2: 0.28752793043316455
[2025-04-18 09:17:18] 2025-04-18 13:16:57,611 | INFO     | current chi2=0.28752793043316455 (change=79.67702322026932 %)
[2025-04-18 09:17:18] 2025-04-18 13:16:57,611 | INFO     | sum of square deviations: 37610174603.02216
[2025-04-18 09:17:18] 2025-04-18 13:16:57,616 | INFO     | sum of deviations: -18386779852.57779
[2025-04-18 09:17:18] 2025-04-18 13:16:57,616 | INFO     | mean x: 1744967078.1555555
[2025-04-18 09:17:18] 2025-04-18 13:16:57,616 | INFO     | mean y: 2669896.0464646462
[2025-04-18 09:17:18] 2025-04-18 13:16:57,616 | INFO     | -- intersect: 855745582.4715941
[2025-04-18 09:17:18] 2025-04-18 13:16:57,616 | INFO     | intersect: 855745582.4715941
[2025-04-18 09:17:18] 2025-04-18 13:16:57,617 | INFO     | chi2: 0.13651012709474392
[2025-04-18 09:17:18] 2025-04-18 13:16:57,617 | INFO     | current chi2=0.13651012709474392 (change=52.522829038177385 %)
[2025-04-18 09:17:18] 2025-04-18 13:16:57,617 | INFO     | sum of square deviations: 36481802238.77716
[2025-04-18 09:17:18] 2025-04-18 13:16:57,622 | INFO     | sum of deviations: -33217837725.404102
[2025-04-18 09:17:18] 2025-04-18 13:16:57,622 | INFO     | mean x: 1744967230.667347
[2025-04-18 09:17:18] 2025-04-18 13:16:57,622 | INFO     | mean y: 2671895.212244898
[2025-04-18 09:17:18] 2025-04-18 13:16:57,622 | INFO     | -- intersect: 1591519889.2086792
[2025-04-18 09:17:18] 2025-04-18 13:16:57,622 | INFO     | intersect: 1591519889.2086792
[2025-04-18 09:17:18] 2025-04-18 13:16:57,623 | INFO     | chi2: 0.09379154254186846
[2025-04-18 09:17:18] 2025-04-18 13:16:57,623 | INFO     | current chi2=0.09379154254186846 (change=31.293344649241238 %)
[2025-04-18 09:17:18] 2025-04-18 13:16:57,624 | INFO     | sum of square deviations: 35376281148.10309
[2025-04-18 09:17:18] 2025-04-18 13:16:57,628 | INFO     | sum of deviations: -22074001792.24742
[2025-04-18 09:17:18] 2025-04-18 13:16:57,628 | INFO     | mean x: 1744967383.1752577
[2025-04-18 09:17:18] 2025-04-18 13:16:57,628 | INFO     | mean y: 2670357.7793814433
[2025-04-18 09:17:18] 2025-04-18 13:16:57,629 | INFO     | -- intersect: 1091490660.3534787
[2025-04-18 09:17:18] 2025-04-18 13:16:57,629 | INFO     | intersect: 1091490660.3534787
[2025-04-18 09:17:18] 2025-04-18 13:16:57,629 | INFO     | chi2: 0.08078359782698324
[2025-04-18 09:17:18] 2025-04-18 13:16:57,629 | INFO     | current chi2=0.08078359782698324 (change=13.868995393778153 %)
[2025-04-18 09:17:18] 2025-04-18 13:16:57,629 | INFO     | left removable region: 60
[2025-04-18 09:17:18] 2025-04-18 13:16:57,630 | INFO     | sum of square deviations: 28068379110.561207
[2025-04-18 09:17:18] 2025-04-18 13:16:57,634 | INFO     | sum of deviations: 13294888096.579046
[2025-04-18 09:17:18] 2025-04-18 13:16:57,634 | INFO     | mean x: 1744968115.2516704
[2025-04-18 09:17:18] 2025-04-18 13:16:57,634 | INFO     | mean y: 2664823.561247216
[2025-04-18 09:17:18] 2025-04-18 13:16:57,634 | INFO     | -- intersect: -823857995.3371311
[2025-04-18 09:17:18] 2025-04-18 13:16:57,634 | INFO     | intersect: -823857995.3371311
[2025-04-18 09:17:18] 2025-04-18 13:16:57,635 | INFO     | chi2: 0.0007069976142352714
[2025-04-18 09:17:18] 2025-04-18 13:16:57,635 | INFO     | -- intersect: -823857995.3371311
[2025-04-18 09:17:18] 2025-04-18 13:16:57,635 | INFO     | current memory leak: 0.47 B/s (using 449 data points, chi2=0.00)
[2025-04-18 09:17:18] 2025-04-18 13:16:57,636 | INFO     | ..............................
[2025-04-18 09:17:18] 2025-04-18 13:16:57,636 | INFO     | . Timing measurements:
[2025-04-18 09:17:18] 2025-04-18 13:16:57,636 | INFO     | . get job = 0 s
[2025-04-18 09:17:18] 2025-04-18 13:16:57,636 | INFO     | . initial setup = 4 s
[2025-04-18 09:17:18] 2025-04-18 13:16:57,636 | INFO     | . payload setup = 24 s
[2025-04-18 09:17:18] 2025-04-18 13:16:57,636 | INFO     | . stage-in = 0 s
[2025-04-18 09:17:18] 2025-04-18 13:16:57,636 | INFO     | . payload execution = 31433 s
[2025-04-18 09:17:18] 2025-04-18 13:16:57,636 | INFO     | . stage-out = 2 s
[2025-04-18 09:17:18] 2025-04-18 13:16:57,636 | INFO     | . log creation = 0 s
[2025-04-18 09:17:18] 2025-04-18 13:16:57,637 | INFO     | ..............................
[2025-04-18 09:17:18] 2025-04-18 13:16:57,714 | INFO     | 
[2025-04-18 09:17:18] 2025-04-18 13:16:57,715 | INFO     | job summary report
[2025-04-18 09:17:18] 2025-04-18 13:16:57,715 | INFO     | --------------------------------------------------
[2025-04-18 09:17:18] 2025-04-18 13:16:57,715 | INFO     | PanDA job id: 6605744008
[2025-04-18 09:17:18] 2025-04-18 13:16:57,715 | INFO     | task id: 44075483
[2025-04-18 09:17:18] 2025-04-18 13:16:57,715 | INFO     | errors: (none)
[2025-04-18 09:17:18] 2025-04-18 13:16:57,715 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-18 09:17:18] 2025-04-18 13:16:57,715 | INFO     | pilot state: finished 
[2025-04-18 09:17:18] 2025-04-18 13:16:57,715 | INFO     | transexitcode: 0
[2025-04-18 09:17:18] 2025-04-18 13:16:57,715 | INFO     | exeerrorcode: 0
[2025-04-18 09:17:18] 2025-04-18 13:16:57,716 | INFO     | exeerrordiag: 
[2025-04-18 09:17:18] 2025-04-18 13:16:57,716 | INFO     | exitcode: 0
[2025-04-18 09:17:18] 2025-04-18 13:16:57,716 | INFO     | exitmsg: OK
[2025-04-18 09:17:18] 2025-04-18 13:16:57,716 | INFO     | cpuconsumptiontime: 87118 s
[2025-04-18 09:17:18] 2025-04-18 13:16:57,716 | INFO     | nevents: 400
[2025-04-18 09:17:18] 2025-04-18 13:16:57,716 | INFO     | neventsw: 0
[2025-04-18 09:17:18] 2025-04-18 13:16:57,716 | INFO     | pid: 19248
[2025-04-18 09:17:18] 2025-04-18 13:16:57,716 | INFO     | pgrp: 19248
[2025-04-18 09:17:18] 2025-04-18 13:16:57,716 | INFO     | corecount: 12
[2025-04-18 09:17:18] 2025-04-18 13:16:57,716 | INFO     | event service: False
[2025-04-18 09:17:18] 2025-04-18 13:16:57,717 | INFO     | sizes: {0: 2426653, 1: 2426852, 12: 2426852, 16: 2427086, 23: 2427114, 31461: 2464747, 31464: 2473688, 31466: 2473744, 31472: 2473914}
[2025-04-18 09:17:18] 2025-04-18 13:16:57,717 | INFO     | --------------------------------------------------
[2025-04-18 09:17:18] 2025-04-18 13:16:57,717 | INFO     | 
[2025-04-18 09:17:18] 2025-04-18 13:16:57,717 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-18 09:17:18] 2025-04-18 13:16:57,738 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-18 09:17:18] 2025-04-18 13:16:57,738 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-18 09:17:18] 2025-04-18 13:16:57,738 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-18 09:17:18] 2025-04-18 13:16:57,738 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-18 09:17:18] 2025-04-18 13:16:57,738 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-18 09:17:18] 2025-04-18 13:16:57,738 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-18 09:17:18] 2025-04-18 13:16:57,738 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-18 09:17:18] 2025-04-18 13:16:57,738 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-18 09:17:18] 2025-04-18 13:16:57,739 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-18 09:17:18] 2025-04-18 13:16:57,739 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-18 09:17:18] 2025-04-18 13:16:57,739 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-18 09:17:18] 2025-04-18 13:16:57,739 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-18 09:17:18] 2025-04-18 13:16:57,739 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-18 09:17:18] 2025-04-18 13:16:57,739 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-18 09:17:18] 2025-04-18 13:16:57,739 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-18 09:17:18] 2025-04-18 13:16:57,739 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-18 09:17:18] 2025-04-18 13:16:57,739 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-18 09:17:18] 2025-04-18 13:16:57,740 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-18 09:17:18] 2025-04-18 13:16:57,740 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-18 09:17:18] 2025-04-18 13:16:57,740 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-18 09:17:18] 2025-04-18 13:16:57,740 | INFO     | job 6605744008 has completed (purged errors)
[2025-04-18 09:17:18] 2025-04-18 13:16:57,740 | INFO     | overall cleanup function is called
[2025-04-18 09:17:18] 2025-04-18 13:16:58,746 | INFO     | --- collectZombieJob: --- 10, [19248]
[2025-04-18 09:17:18] 2025-04-18 13:16:58,747 | INFO     | zombie collector waiting for pid 19248
[2025-04-18 09:17:18] 2025-04-18 13:16:58,747 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-18 09:17:18] 2025-04-18 13:16:58,747 | INFO     | collected zombie processes
[2025-04-18 09:17:18] 2025-04-18 13:16:58,747 | INFO     | will attempt to kill all subprocesses of pid=19248
[2025-04-18 09:17:18] 2025-04-18 13:16:58,860 | INFO     | process IDs to be killed: [19248] (in reverse order)
[2025-04-18 09:17:18] 2025-04-18 13:16:58,909 | WARNING  | found no corresponding commands to process id(s)
[2025-04-18 09:17:18] 2025-04-18 13:16:58,910 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-18 09:17:18] 2025-04-18 13:16:58,925 | INFO     | did not find any defunct processes belonging to 19248
[2025-04-18 09:17:18] 2025-04-18 13:16:58,929 | INFO     | did not find any defunct processes belonging to 19248
[2025-04-18 09:17:18] 2025-04-18 13:16:58,929 | INFO     | ready for new job
[2025-04-18 09:17:18] 2025-04-18 13:16:58,929 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-18 09:17:18] 2025-04-18 13:16:58,937 | INFO     | **************************************
[2025-04-18 09:17:18] 2025-04-18 13:16:58,938 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-18 09:17:18] 2025-04-18 13:16:58,938 | INFO     | **************************************
[2025-04-18 09:17:18] 2025-04-18 13:16:58,938 | INFO     | 
[2025-04-18 09:17:18] 2025-04-18 13:16:58,939 | INFO     | architecture information:
[2025-04-18 09:17:18] 2025-04-18 13:16:58,940 | INFO     | executing command: cat /etc/os-release
[2025-04-18 09:17:18] 2025-04-18 13:16:58,949 | INFO     | cat /etc/os-release:
[2025-04-18 09:17:18] NAME="CentOS Linux"
[2025-04-18 09:17:18] VERSION="7 (Core)"
[2025-04-18 09:17:18] ID="centos"
[2025-04-18 09:17:18] ID_LIKE="rhel fedora"
[2025-04-18 09:17:18] VERSION_ID="7"
[2025-04-18 09:17:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-18 09:17:18] ANSI_COLOR="0;31"
[2025-04-18 09:17:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-18 09:17:18] HOME_URL="https://www.centos.org/"
[2025-04-18 09:17:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-18 09:17:18] 
[2025-04-18 09:17:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-18 09:17:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-18 09:17:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-18 09:17:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-18 09:17:18] 
[2025-04-18 09:17:18] 2025-04-18 13:16:58,949 | INFO     | **************************************
[2025-04-18 09:17:18] 2025-04-18 13:16:59,121 [wrapper] supervise_pilot (15 min periods counter: 36)
[2025-04-18 09:17:18] 2025-04-18 13:16:59,452 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-18 09:17:18] 2025-04-18 13:16:59,464 | INFO     | sufficient remaining disk space (29219618816 B)
[2025-04-18 09:17:18] 2025-04-18 13:16:59,464 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-18 09:17:18] 2025-04-18 13:16:59,464 | INFO     | current server update state: UPDATING_FINAL
[2025-04-18 09:17:18] 2025-04-18 13:16:59,465 | INFO     | update_server=False
[2025-04-18 09:17:18] 2025-04-18 13:16:59,465 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-18 09:17:18] 2025-04-18 13:16:59,465 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-18 09:17:18] 2025-04-18 13:16:59,465 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-18 09:17:18] 2025-04-18 13:16:59,465 | INFO     | found 0 job(s) in 20 queues
[2025-04-18 09:17:18] 2025-04-18 13:16:59,466 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-18 09:17:18] 2025-04-18 13:16:59,466 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-18 09:17:18] 2025-04-18 13:16:59,500 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-04-18 09:17:18] 2025-04-18 13:16:59,501 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-04-18 09:17:18] 2025-04-18 13:16:59,501 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-18 09:17:18] 2025-04-18 13:16:59,501 | INFO     | will abort loop
[2025-04-18 09:17:18] 2025-04-18 13:16:59,562 | INFO     | all job control threads have been joined
[2025-04-18 09:17:18] 2025-04-18 13:16:59,873 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-18 09:17:18] 2025-04-18 13:17:00,157 | INFO     | all payload control threads have been joined
[2025-04-18 09:17:18] 2025-04-18 13:17:00,267 | INFO     | all data control threads have been joined
[2025-04-18 09:17:18] 2025-04-18 13:17:00,470 | INFO     | [job] retrieve thread has finished
[2025-04-18 09:17:18] 2025-04-18 13:17:00,471 | INFO     | [job] queue monitor thread has finished
[2025-04-18 09:17:18] 2025-04-18 13:17:00,506 | INFO     | [job] job monitor thread has finished
[2025-04-18 09:17:18] 2025-04-18 13:17:00,568 | INFO     | [job] control thread has finished
[2025-04-18 09:17:18] 2025-04-18 13:17:00,593 | INFO     | [payload] validate_pre thread has finished
[2025-04-18 09:17:18] 2025-04-18 13:17:00,614 | INFO     | [data] copytool_in thread has finished
[2025-04-18 09:17:18] 2025-04-18 13:17:01,014 | INFO     | [payload] execute_payloads thread has finished
[2025-04-18 09:17:18] 2025-04-18 13:17:01,158 | INFO     | [payload] control thread has finished
[2025-04-18 09:17:18] 2025-04-18 13:17:01,262 | INFO     | [job] validate thread has finished
[2025-04-18 09:17:18] 2025-04-18 13:17:01,271 | INFO     | [data] control thread has finished
[2025-04-18 09:17:18] 2025-04-18 13:17:01,338 | INFO     | [payload] failed_post thread has finished
[2025-04-18 09:17:18] 2025-04-18 13:17:01,874 | INFO     | [data] copytool_out thread has finished
[2025-04-18 09:17:18] 2025-04-18 13:17:01,931 | INFO     | [job] create_data_payload thread has finished
[2025-04-18 09:17:18] 2025-04-18 13:17:02,048 | INFO     | [payload] validate_post thread has finished
[2025-04-18 09:17:18] 2025-04-18 13:17:02,216 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-18 09:17:18] 2025-04-18 13:17:06,222 | INFO     | [data] queue_monitor thread has finished
[2025-04-18 09:17:18] 2025-04-18 13:17:10,156 | INFO     | job.realtimelogging is not enabled
[2025-04-18 09:17:18] 2025-04-18 13:17:11,161 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-18 09:17:18] 2025-04-18 13:17:11,410 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139740760692544)>', '<ExcThread(monitor, started 139740175132416)>']
[2025-04-18 09:17:18] 2025-04-18 13:17:11,514 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-18 09:17:18] 2025-04-18 13:17:11,515 | INFO     | [monitor] control thread has ended
[2025-04-18 09:17:18] 2025-04-18 13:17:16,435 | INFO     | all workflow threads have been joined
[2025-04-18 09:17:18] 2025-04-18 13:17:16,435 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-18 09:17:18] 2025-04-18 13:17:16,444 | INFO     | traces error code: 0
[2025-04-18 09:17:18] 2025-04-18 13:17:16,444 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-18 09:17:18] 2025-04-18 13:17:17,006 [wrapper] ==== pilot stdout END ====
[2025-04-18 09:17:18] 2025-04-18 13:17:17,009 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-18 09:17:18] 2025-04-18 13:17:17,012 [wrapper] pilotpid: 12608
[2025-04-18 09:17:18] 2025-04-18 13:17:17,014 [wrapper] Pilot exit status: 0
[2025-04-18 09:17:18] 2025-04-18 13:17:17,056 [wrapper] pandaids: 6605744008 6605744008
[2025-04-18 09:17:18] 2025-04-18 13:17:17,096 [wrapper] cleanup supervisor_pilot 32128 12610
[2025-04-18 09:17:18] 2025-04-18 13:17:17,104 [wrapper] Test setup, not cleaning
[2025-04-18 09:17:18] 2025-04-18 13:17:17,107 [wrapper] apfmon messages muted
[2025-04-18 09:17:18] 2025-04-18 13:17:17,110 [wrapper] ==== wrapper stdout END ====
[2025-04-18 09:17:18] 2025-04-18 13:17:17,112 [wrapper] ==== wrapper stderr END ====
[2025-04-18 09:17:18]  *** Error codes and diagnostics ***
[2025-04-18 09:17:18]     "exeErrorCode": 0,
[2025-04-18 09:17:18]     "exeErrorDiag": "",
[2025-04-18 09:17:18]     "pilotErrorCode": 0,
[2025-04-18 09:17:18]     "pilotErrorDiag": "",
[2025-04-18 09:17:18]  *** Listing of results directory ***
[2025-04-18 09:17:18] total 630864
[2025-04-18 09:17:18] drwx------ 4 boincer umatlas      4096 Apr  3 04:00 pilot3
[2025-04-18 09:17:18] -rw-r--r-- 1 boincer umatlas    495897 Apr 17 12:56 pilot3.tar.gz
[2025-04-18 09:17:18] -rwx------ 1 boincer umatlas     37140 Apr 17 13:16 runpilot2-wrapper.sh
[2025-04-18 09:17:18] -rw-r--r-- 1 boincer umatlas      5111 Apr 17 13:16 queuedata.json
[2025-04-18 09:17:18] -rw-r--r-- 1 boincer umatlas       100 Apr 17 16:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-18 09:17:18] -rwxr-xr-x 1 boincer umatlas      7986 Apr 17 16:19 run_atlas
[2025-04-18 09:17:18] -rw-r--r-- 1 boincer umatlas       105 Apr 17 16:19 job.xml
[2025-04-18 09:17:18] -rw-r--r-- 3 boincer umatlas 221304516 Apr 17 16:19 EVNT.44075481._002271.pool.root.1
[2025-04-18 09:17:18] -rw-r--r-- 3 boincer umatlas 221304516 Apr 17 16:19 ATLAS.root_0
[2025-04-18 09:17:18] -rw-r--r-- 2 boincer umatlas     17569 Apr 17 16:19 start_atlas.sh
[2025-04-18 09:17:18] drwxrwx--x 2 boincer umatlas      4096 Apr 17 16:19 shared
[2025-04-18 09:17:18] -rw-r--r-- 2 boincer umatlas    508890 Apr 17 16:19 input.tar.gz
[2025-04-18 09:17:18] -rw-r--r-- 1 boincer umatlas         0 Apr 17 16:19 boinc_lockfile
[2025-04-18 09:17:18] -rw-r--r-- 1 boincer umatlas      2579 Apr 18 00:31 pandaJob.out
[2025-04-18 09:17:18] -rw------- 1 boincer umatlas       424 Apr 18 00:31 setup.sh.local
[2025-04-18 09:17:18] -rw------- 1 boincer umatlas    990242 Apr 18 00:31 agis_schedconf.cvmfs.json
[2025-04-18 09:17:18] -rw-r--r-- 1 boincer umatlas      5867 Apr 18 09:12 init_data.xml
[2025-04-18 09:17:18] -rw------- 1 boincer umatlas 193375966 Apr 18 09:15 HITS.44075483._058420.pool.root.1
[2025-04-18 09:17:18] -rw-r--r-- 1 boincer umatlas       532 Apr 18 09:15 boinc_task_state.xml
[2025-04-18 09:17:18] -rw------- 1 boincer umatlas        96 Apr 18 09:16 pilot_heartbeat.json
[2025-04-18 09:17:18] -rw------- 1 boincer umatlas      1069 Apr 18 09:16 memory_monitor_summary.json
[2025-04-18 09:17:18] -rw------- 1 boincer umatlas   1618536 Apr 18 09:16 agis_ddmendpoints.agis.ALL.json
[2025-04-18 09:17:18] -rw------- 1 boincer umatlas    606991 Apr 18 09:16 log.44075483._058420.job.log.tgz.1
[2025-04-18 09:17:18] -rw------- 1 boincer umatlas      7776 Apr 18 09:16 heartbeat.json
[2025-04-18 09:17:18] -rw-r--r-- 1 boincer umatlas      8192 Apr 18 09:17 boinc_mmap_file
[2025-04-18 09:17:18] -rw-r--r-- 1 boincer umatlas        29 Apr 18 09:17 wrapper_checkpoint.txt
[2025-04-18 09:17:18] -rw------- 1 boincer umatlas      4734 Apr 18 09:17 pilotlog.txt
[2025-04-18 09:17:18] -rw------- 1 boincer umatlas   2469020 Apr 18 09:17 log.44075483._058420.job.log.1
[2025-04-18 09:17:18] -rw------- 1 boincer umatlas       357 Apr 18 09:17 output.list
[2025-04-18 09:17:18] -rw-r--r-- 1 boincer umatlas       620 Apr 18 09:17 runtime_log
[2025-04-18 09:17:18] -rw------- 1 boincer umatlas   3092480 Apr 18 09:17 result.tar.gz
[2025-04-18 09:17:18] -rw-r--r-- 1 boincer umatlas     11101 Apr 18 09:17 runtime_log.err
[2025-04-18 09:17:18] -rw------- 1 boincer umatlas       788 Apr 18 09:17 LTgKDmV1hP7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmgNdLDmt7MXAo.diag
[2025-04-18 09:17:18] -rw-r--r-- 1 boincer umatlas     23100 Apr 18 09:17 stderr.txt
[2025-04-18 09:17:18] HITS file was successfully produced:
[2025-04-18 09:17:18] -rw------- 1 boincer umatlas 193375966 Apr 18 09:15 shared/HITS.pool.root.1
[2025-04-18 09:17:18]  *** Contents of shared directory: ***
[2025-04-18 09:17:18] total 408512
[2025-04-18 09:17:18] -rw-r--r-- 3 boincer umatlas 221304516 Apr 17 16:19 ATLAS.root_0
[2025-04-18 09:17:18] -rw-r--r-- 2 boincer umatlas     17569 Apr 17 16:19 start_atlas.sh
[2025-04-18 09:17:18] -rw-r--r-- 2 boincer umatlas    508890 Apr 17 16:19 input.tar.gz
[2025-04-18 09:17:18] -rw------- 1 boincer umatlas 193375966 Apr 18 09:15 HITS.pool.root.1
[2025-04-18 09:17:18] -rw------- 1 boincer umatlas   3092480 Apr 18 09:17 result.tar.gz
09:17:19 (8867): run_atlas exited; CPU time 87456.305876
09:17:19 (8867): called boinc_finish(0)

</stderr_txt>
]]>

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