Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
07:27:44 (466700): wrapper (7.7.26015): starting
07:27:44 (466700): wrapper: running run_atlas (--nthreads 2)
[2025-04-18 07:27:44] Arguments: --nthreads 2
[2025-04-18 07:27:44] Threads: 2
[2025-04-18 07:27:44] Checking for CVMFS
[2025-04-18 07:27:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-18 07:27:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-18 07:27:44] Running cvmfs_config stat atlas.cern.ch
[2025-04-18 07:27:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-18 07:27:44] 2.9.2.0 2857 2259 63924 144991 1 55 24194890 36864000 0 130560 0 1170255 99.987 553955 9351 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-04-18 07:27:44] CVMFS is ok
[2025-04-18 07:27:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-18 07:27:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-18 07:27:44] Further information can be found at the LHC@home message board.
[2025-04-18 07:27:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-18 07:27:44] Checking for apptainer binary...
[2025-04-18 07:27:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-18 07:27:44] Running /usr/bin/apptainer --version
[2025-04-18 07:27:44] apptainer version 1.3.6-6.1
[2025-04-18 07:27:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-18 07:27:44] thA366a
[2025-04-18 07:27:44] apptainer works
[2025-04-18 07:27:44] Set ATHENA_PROC_NUMBER=2
[2025-04-18 07:27:44] Set ATHENA_CORE_NUMBER=2
[2025-04-18 07:27:44] Starting ATLAS job with PandaID=6605743988
[2025-04-18 07:27:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-18 10:00:17]  *** The last 200 lines of the pilot log: ***
[2025-04-18 10:00:17] 2025-04-18 07:59:35,092 | INFO     | extracted standard memory fields from prmon json
[2025-04-18 10:00:17] 2025-04-18 07:59:35,092 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-18 10:00:17] 2025-04-18 07:59:35,092 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-18 10:00:17] 2025-04-18 07:59:35,092 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-18 10:00:17] 2025-04-18 07:59:35,093 | INFO     | fitting pss+swap vs Time
[2025-04-18 10:00:17] 2025-04-18 07:59:35,093 | INFO     | sum of square deviations: 1025693650.0
[2025-04-18 10:00:17] 2025-04-18 07:59:35,093 | INFO     | sum of deviations: 13769950899.999994
[2025-04-18 10:00:17] 2025-04-18 07:59:35,093 | INFO     | mean x: 1744958605.0
[2025-04-18 10:00:17] 2025-04-18 07:59:35,093 | INFO     | mean y: 2312852.5436241613
[2025-04-18 10:00:17] 2025-04-18 07:59:35,094 | INFO     | -- intersect: -23423779639.481148
[2025-04-18 10:00:17] 2025-04-18 07:59:35,094 | INFO     | intersect: -23423779639.481148
[2025-04-18 10:00:17] 2025-04-18 07:59:35,094 | INFO     | chi2: 3.723167531749637
[2025-04-18 10:00:17] 2025-04-18 07:59:35,094 | INFO     | sum of square deviations: 925859220.0
[2025-04-18 10:00:17] 2025-04-18 07:59:35,094 | INFO     | sum of deviations: 13878373520.000008
[2025-04-18 10:00:17] 2025-04-18 07:59:35,094 | INFO     | mean x: 1744958452.5
[2025-04-18 10:00:17] 2025-04-18 07:59:35,094 | INFO     | mean y: 2313020.861111111
[2025-04-18 10:00:17] 2025-04-18 07:59:35,094 | INFO     | -- intersect: -26154131347.296925
[2025-04-18 10:00:17] 2025-04-18 07:59:35,094 | INFO     | intersect: -26154131347.296925
[2025-04-18 10:00:17] 2025-04-18 07:59:35,094 | INFO     | chi2: 3.7298544129696323
[2025-04-18 10:00:17] 2025-04-18 07:59:35,094 | INFO     | current chi2=3.7298544129696323 (change=-0.17960194278050676 %)
[2025-04-18 10:00:17] 2025-04-18 07:59:35,094 | INFO     | right removable region: 143
[2025-04-18 10:00:17] 2025-04-18 07:59:35,094 | INFO     | sum of square deviations: 925859220.0
[2025-04-18 10:00:17] 2025-04-18 07:59:35,095 | INFO     | sum of deviations: -15399747557.999994
[2025-04-18 10:00:17] 2025-04-18 07:59:35,095 | INFO     | mean x: 1744958757.5
[2025-04-18 10:00:17] 2025-04-18 07:59:35,095 | INFO     | mean y: 2357159.1666666665
[2025-04-18 10:00:17] 2025-04-18 07:59:35,095 | INFO     | -- intersect: 29026126414.951935
[2025-04-18 10:00:17] 2025-04-18 07:59:35,095 | INFO     | intersect: 29026126414.951935
[2025-04-18 10:00:17] 2025-04-18 07:59:35,095 | INFO     | chi2: 1.5724401347267194
[2025-04-18 10:00:17] 2025-04-18 07:59:35,095 | INFO     | current chi2=1.5724401347267194 (change=57.76606555258127 %)
[2025-04-18 10:00:17] 2025-04-18 07:59:35,095 | INFO     | sum of square deviations: 832722590.0
[2025-04-18 10:00:17] 2025-04-18 07:59:35,095 | INFO     | sum of deviations: -39143972853.0
[2025-04-18 10:00:17] 2025-04-18 07:59:35,095 | INFO     | mean x: 1744958910.0
[2025-04-18 10:00:17] 2025-04-18 07:59:35,095 | INFO     | mean y: 2396050.676258993
[2025-04-18 10:00:17] 2025-04-18 07:59:35,096 | INFO     | -- intersect: 82028061047.51569
[2025-04-18 10:00:17] 2025-04-18 07:59:35,096 | INFO     | intersect: 82028061047.51569
[2025-04-18 10:00:17] 2025-04-18 07:59:35,096 | INFO     | chi2: 0.26075804539155256
[2025-04-18 10:00:17] 2025-04-18 07:59:35,096 | INFO     | current chi2=0.26075804539155256 (change=83.41698105811382 %)
[2025-04-18 10:00:17] 2025-04-18 07:59:35,096 | INFO     | sum of square deviations: 746051197.5
[2025-04-18 10:00:17] 2025-04-18 07:59:35,096 | INFO     | sum of deviations: -35670611533.49999
[2025-04-18 10:00:17] 2025-04-18 07:59:35,096 | INFO     | mean x: 1744959062.5
[2025-04-18 10:00:17] 2025-04-18 07:59:35,096 | INFO     | mean y: 2389861.052238806
[2025-04-18 10:00:17] 2025-04-18 07:59:35,096 | INFO     | -- intersect: 83433335443.44016
[2025-04-18 10:00:17] 2025-04-18 07:59:35,096 | INFO     | intersect: 83433335443.44016
[2025-04-18 10:00:17] 2025-04-18 07:59:35,096 | INFO     | chi2: 0.24650080179505215
[2025-04-18 10:00:17] 2025-04-18 07:59:35,096 | INFO     | current chi2=0.24650080179505215 (change=5.467614076908663 %)
[2025-04-18 10:00:17] 2025-04-18 07:59:35,096 | INFO     | left removable region: 30
[2025-04-18 10:00:17] 2025-04-18 07:59:35,096 | INFO     | sum of square deviations: 447383272.0
[2025-04-18 10:00:17] 2025-04-18 07:59:35,097 | INFO     | sum of deviations: -18610163772.0
[2025-04-18 10:00:17] 2025-04-18 07:59:35,097 | INFO     | mean x: 1744959337.0
[2025-04-18 10:00:17] 2025-04-18 07:59:35,097 | INFO     | mean y: 2359655.2477876106
[2025-04-18 10:00:17] 2025-04-18 07:59:35,097 | INFO     | -- intersect: 72588844375.33481
[2025-04-18 10:00:17] 2025-04-18 07:59:35,097 | INFO     | intersect: 72588844375.33481
[2025-04-18 10:00:17] 2025-04-18 07:59:35,097 | INFO     | chi2: 0.20933450287407504
[2025-04-18 10:00:17] 2025-04-18 07:59:35,097 | INFO     | -- intersect: 72588844375.33481
[2025-04-18 10:00:17] 2025-04-18 07:59:35,097 | INFO     | current memory leak: -41.60 B/s (using 113 data points, chi2=0.21)
[2025-04-18 10:00:17] 2025-04-18 07:59:35,097 | INFO     | ..............................
[2025-04-18 10:00:17] 2025-04-18 07:59:35,097 | INFO     | . Timing measurements:
[2025-04-18 10:00:17] 2025-04-18 07:59:35,097 | INFO     | . get job = 0 s
[2025-04-18 10:00:17] 2025-04-18 07:59:35,097 | INFO     | . initial setup = 1 s
[2025-04-18 10:00:17] 2025-04-18 07:59:35,097 | INFO     | . payload setup = 3 s
[2025-04-18 10:00:17] 2025-04-18 07:59:35,097 | INFO     | . stage-in = 0 s
[2025-04-18 10:00:17] 2025-04-18 07:59:35,097 | INFO     | . payload execution = 9081 s
[2025-04-18 10:00:17] 2025-04-18 07:59:35,097 | INFO     | . stage-out = 0 s
[2025-04-18 10:00:17] 2025-04-18 07:59:35,097 | INFO     | . log creation = 0 s
[2025-04-18 10:00:17] 2025-04-18 07:59:35,097 | INFO     | ..............................
[2025-04-18 10:00:17] 2025-04-18 07:59:35,132 | INFO     | 
[2025-04-18 10:00:17] 2025-04-18 07:59:35,132 | INFO     | job summary report
[2025-04-18 10:00:17] 2025-04-18 07:59:35,132 | INFO     | --------------------------------------------------
[2025-04-18 10:00:17] 2025-04-18 07:59:35,132 | INFO     | PanDA job id: 6605743988
[2025-04-18 10:00:17] 2025-04-18 07:59:35,132 | INFO     | task id: 44075483
[2025-04-18 10:00:17] 2025-04-18 07:59:35,132 | INFO     | errors: (none)
[2025-04-18 10:00:17] 2025-04-18 07:59:35,132 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-18 10:00:17] 2025-04-18 07:59:35,132 | INFO     | pilot state: finished 
[2025-04-18 10:00:17] 2025-04-18 07:59:35,132 | INFO     | transexitcode: 0
[2025-04-18 10:00:17] 2025-04-18 07:59:35,132 | INFO     | exeerrorcode: 0
[2025-04-18 10:00:17] 2025-04-18 07:59:35,132 | INFO     | exeerrordiag: 
[2025-04-18 10:00:17] 2025-04-18 07:59:35,132 | INFO     | exitcode: 0
[2025-04-18 10:00:17] 2025-04-18 07:59:35,132 | INFO     | exitmsg: OK
[2025-04-18 10:00:17] 2025-04-18 07:59:35,132 | INFO     | cpuconsumptiontime: 16903 s
[2025-04-18 10:00:17] 2025-04-18 07:59:35,132 | INFO     | nevents: 400
[2025-04-18 10:00:17] 2025-04-18 07:59:35,132 | INFO     | neventsw: 0
[2025-04-18 10:00:17] 2025-04-18 07:59:35,132 | INFO     | pid: 476745
[2025-04-18 10:00:17] 2025-04-18 07:59:35,132 | INFO     | pgrp: 476745
[2025-04-18 10:00:17] 2025-04-18 07:59:35,132 | INFO     | corecount: 2
[2025-04-18 10:00:17] 2025-04-18 07:59:35,132 | INFO     | event service: False
[2025-04-18 10:00:17] 2025-04-18 07:59:35,133 | INFO     | sizes: {0: 2426826, 3: 2427032, 11: 2427060, 9088: 2464264, 9089: 2464264, 9092: 2464434}
[2025-04-18 10:00:17] 2025-04-18 07:59:35,133 | INFO     | --------------------------------------------------
[2025-04-18 10:00:17] 2025-04-18 07:59:35,133 | INFO     | 
[2025-04-18 10:00:17] 2025-04-18 07:59:35,133 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-04-18 10:00:17] 2025-04-18 07:59:35,145 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-18 10:00:17] 2025-04-18 07:59:35,145 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-18 10:00:17] 2025-04-18 07:59:35,145 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-18 10:00:17] 2025-04-18 07:59:35,145 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-18 10:00:17] 2025-04-18 07:59:35,146 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-18 10:00:17] 2025-04-18 07:59:35,146 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-18 10:00:17] 2025-04-18 07:59:35,146 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-18 10:00:17] 2025-04-18 07:59:35,146 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-18 10:00:17] 2025-04-18 07:59:35,146 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-18 10:00:17] 2025-04-18 07:59:35,146 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-18 10:00:17] 2025-04-18 07:59:35,146 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-18 10:00:17] 2025-04-18 07:59:35,146 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-18 10:00:17] 2025-04-18 07:59:35,146 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-18 10:00:17] 2025-04-18 07:59:35,146 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-18 10:00:17] 2025-04-18 07:59:35,146 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-18 10:00:17] 2025-04-18 07:59:35,146 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-18 10:00:17] 2025-04-18 07:59:35,146 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-18 10:00:17] 2025-04-18 07:59:35,146 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-18 10:00:17] 2025-04-18 07:59:35,146 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-18 10:00:17] 2025-04-18 07:59:35,146 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-18 10:00:17] 2025-04-18 07:59:35,146 | INFO     | job 6605743988 has completed (purged errors)
[2025-04-18 10:00:17] 2025-04-18 07:59:35,146 | INFO     | overall cleanup function is called
[2025-04-18 10:00:17] 2025-04-18 07:59:36,153 | INFO     | --- collectZombieJob: --- 10, [476745]
[2025-04-18 10:00:17] 2025-04-18 07:59:36,153 | INFO     | zombie collector waiting for pid 476745
[2025-04-18 10:00:17] 2025-04-18 07:59:36,153 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-18 10:00:17] 2025-04-18 07:59:36,153 | INFO     | collected zombie processes
[2025-04-18 10:00:17] 2025-04-18 07:59:36,154 | INFO     | will attempt to kill all subprocesses of pid=476745
[2025-04-18 10:00:17] 2025-04-18 07:59:36,192 | INFO     | process IDs to be killed: [476745] (in reverse order)
[2025-04-18 10:00:17] 2025-04-18 07:59:36,216 | WARNING  | found no corresponding commands to process id(s)
[2025-04-18 10:00:17] 2025-04-18 07:59:36,216 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-18 10:00:17] 2025-04-18 07:59:36,217 | INFO     | did not find any defunct processes belonging to 476745
[2025-04-18 10:00:17] 2025-04-18 07:59:36,218 | INFO     | did not find any defunct processes belonging to 476745
[2025-04-18 10:00:17] 2025-04-18 07:59:36,218 | INFO     | ready for new job
[2025-04-18 10:00:17] 2025-04-18 07:59:36,218 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-18 10:00:17] 2025-04-18 07:59:36,219 | INFO     | **************************************
[2025-04-18 10:00:17] 2025-04-18 07:59:36,219 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-18 10:00:17] 2025-04-18 07:59:36,219 | INFO     | **************************************
[2025-04-18 10:00:17] 2025-04-18 07:59:36,219 | INFO     | 
[2025-04-18 10:00:17] 2025-04-18 07:59:36,219 | INFO     | architecture information:
[2025-04-18 10:00:17] 2025-04-18 07:59:36,220 | INFO     | executing command: cat /etc/os-release
[2025-04-18 10:00:17] 2025-04-18 07:59:36,229 | INFO     | cat /etc/os-release:
[2025-04-18 10:00:17] NAME="CentOS Linux"
[2025-04-18 10:00:17] VERSION="7 (Core)"
[2025-04-18 10:00:17] ID="centos"
[2025-04-18 10:00:17] ID_LIKE="rhel fedora"
[2025-04-18 10:00:17] VERSION_ID="7"
[2025-04-18 10:00:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-18 10:00:17] ANSI_COLOR="0;31"
[2025-04-18 10:00:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-18 10:00:17] HOME_URL="https://www.centos.org/"
[2025-04-18 10:00:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-18 10:00:17] 
[2025-04-18 10:00:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-18 10:00:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-18 10:00:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-18 10:00:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-18 10:00:17] 
[2025-04-18 10:00:17] 2025-04-18 07:59:36,229 | INFO     | **************************************
[2025-04-18 10:00:17] 2025-04-18 07:59:36,523 | INFO     | PID=470336 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-04-18 10:00:17] 2025-04-18 07:59:36,732 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-04-18 10:00:17] 2025-04-18 07:59:36,745 | INFO     | sufficient remaining disk space (231908311040 B)
[2025-04-18 10:00:17] 2025-04-18 07:59:36,746 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-18 10:00:17] 2025-04-18 07:59:36,746 | INFO     | current server update state: UPDATING_FINAL
[2025-04-18 10:00:17] 2025-04-18 07:59:36,746 | INFO     | update_server=False
[2025-04-18 10:00:17] 2025-04-18 07:59:36,746 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-18 10:00:17] 2025-04-18 07:59:36,746 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-18 10:00:17] 2025-04-18 07:59:36,746 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-18 10:00:17] 2025-04-18 07:59:36,746 | INFO     | found 0 job(s) in 20 queues
[2025-04-18 10:00:17] 2025-04-18 07:59:36,746 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-18 10:00:17] 2025-04-18 07:59:36,746 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-18 10:00:17] 2025-04-18 07:59:36,894 | INFO     | all data control threads have been joined
[2025-04-18 10:00:17] 2025-04-18 07:59:37,124 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-18 10:00:17] 2025-04-18 07:59:37,397 | INFO     | all job control threads have been joined
[2025-04-18 10:00:17] 2025-04-18 07:59:37,533 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-18 10:00:17] 2025-04-18 07:59:37,533 | INFO     | aborting loop
[2025-04-18 10:00:17] 2025-04-18 07:59:37,751 | INFO     | [job] retrieve thread has finished
[2025-04-18 10:00:17] 2025-04-18 07:59:37,752 | INFO     | [job] queue monitor thread has finished
[2025-04-18 10:00:17] 2025-04-18 07:59:37,864 | INFO     | all payload control threads have been joined
[2025-04-18 10:00:17] 2025-04-18 07:59:37,900 | INFO     | [data] control thread has finished
[2025-04-18 10:00:17] 2025-04-18 07:59:38,018 | INFO     | [payload] failed_post thread has finished
[2025-04-18 10:00:17] 2025-04-18 07:59:38,035 | INFO     | [data] copytool_in thread has finished
[2025-04-18 10:00:17] 2025-04-18 07:59:38,224 | INFO     | [job] create_data_payload thread has finished
[2025-04-18 10:00:17] 2025-04-18 07:59:38,241 | INFO     | [payload] execute_payloads thread has finished
[2025-04-18 10:00:17] 2025-04-18 07:59:38,248 | INFO     | [payload] validate_pre thread has finished
[2025-04-18 10:00:17] 2025-04-18 07:59:38,272 | INFO     | [job] validate thread has finished
[2025-04-18 10:00:17] 2025-04-18 07:59:38,403 | INFO     | [job] control thread has finished
[2025-04-18 10:00:17] 2025-04-18 07:59:38,539 | INFO     | [job] job monitor thread has finished
[2025-04-18 10:00:17] 2025-04-18 07:59:38,647 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-18 10:00:17] 2025-04-18 07:59:38,675 | INFO     | [payload] validate_post thread has finished
[2025-04-18 10:00:17] 2025-04-18 07:59:38,870 | INFO     | [payload] control thread has finished
[2025-04-18 10:00:17] 2025-04-18 07:59:39,131 | INFO     | [data] copytool_out thread has finished
[2025-04-18 10:00:17] 2025-04-18 07:59:42,654 | INFO     | [data] queue_monitor thread has finished
[2025-04-18 10:00:17] 2025-04-18 07:59:47,246 | INFO     | job.realtimelogging is not enabled
[2025-04-18 10:00:17] 2025-04-18 07:59:48,251 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-18 10:00:17] 2025-04-18 07:59:49,561 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140635254155072)>', '<ExcThread(monitor, started 140634904045312)>']
[2025-04-18 10:00:17] 2025-04-18 07:59:49,816 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-18 10:00:17] 2025-04-18 07:59:49,816 | INFO     | [monitor] control thread has ended
[2025-04-18 10:00:17] 2025-04-18 07:59:54,587 | INFO     | all workflow threads have been joined
[2025-04-18 10:00:17] 2025-04-18 07:59:54,588 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-18 10:00:17] 2025-04-18 07:59:54,588 | INFO     | traces error code: 0
[2025-04-18 10:00:17] 2025-04-18 07:59:54,588 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-18 10:00:17] 2025-04-18 07:59:54,641 [wrapper] ==== pilot stdout END ====
[2025-04-18 10:00:17] 2025-04-18 07:59:54,644 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-18 10:00:17] 2025-04-18 07:59:54,646 [wrapper] pilotpid: 470336
[2025-04-18 10:00:17] 2025-04-18 07:59:54,648 [wrapper] Pilot exit status: 0
[2025-04-18 10:00:17] 2025-04-18 07:59:54,655 [wrapper] pandaids: 6605743988
[2025-04-18 10:00:17] 2025-04-18 07:59:54,670 [wrapper] cleanup supervisor_pilot  494188 470337
[2025-04-18 10:00:17] 2025-04-18 07:59:54,673 [wrapper] Test setup, not cleaning
[2025-04-18 10:00:17] 2025-04-18 07:59:54,675 [wrapper] apfmon messages muted
[2025-04-18 10:00:17] 2025-04-18 07:59:54,678 [wrapper] ==== wrapper stdout END ====
[2025-04-18 10:00:17] 2025-04-18 07:59:54,681 [wrapper] ==== wrapper stderr END ====
[2025-04-18 10:00:17]  *** Error codes and diagnostics ***
[2025-04-18 10:00:17]     "exeErrorCode": 0,
[2025-04-18 10:00:17]     "exeErrorDiag": "",
[2025-04-18 10:00:17]     "pilotErrorCode": 0,
[2025-04-18 10:00:17]     "pilotErrorDiag": "",
[2025-04-18 10:00:17]  *** Listing of results directory ***
[2025-04-18 10:00:17] total 417452
[2025-04-18 10:00:17] -rw-r--r-- 1 boinc boinc    495897 Apr 17 18:56 pilot3.tar.gz
[2025-04-18 10:00:17] -rw-r--r-- 1 boinc boinc      5111 Apr 17 19:11 queuedata.json
[2025-04-18 10:00:17] -rwx------ 1 boinc boinc     37140 Apr 17 19:11 runpilot2-wrapper.sh
[2025-04-18 10:00:17] -rw-r--r-- 1 boinc boinc       100 Apr 18 07:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-18 10:00:17] -rwxr-xr-x 1 boinc boinc      7986 Apr 18 07:27 run_atlas
[2025-04-18 10:00:17] -rw-r--r-- 1 boinc boinc       105 Apr 18 07:27 job.xml
[2025-04-18 10:00:17] -rw-r--r-- 2 boinc boinc 226420455 Apr 18 07:27 EVNT.44075481._002270.pool.root.1
[2025-04-18 10:00:17] -rw-r--r-- 1 boinc boinc      6676 Apr 18 07:27 init_data.xml
[2025-04-18 10:00:17] drwxrwx--x 2 boinc boinc      4096 Apr 18 07:27 shared
[2025-04-18 10:00:17] -rw-r--r-- 2 boinc boinc    508892 Apr 18 07:27 input.tar.gz
[2025-04-18 10:00:17] -rw-r--r-- 2 boinc boinc     17569 Apr 18 07:27 start_atlas.sh
[2025-04-18 10:00:17] -rw-r--r-- 1 boinc boinc         0 Apr 18 07:27 boinc_lockfile
[2025-04-18 10:00:17] -rw-r--r-- 1 boinc boinc      2578 Apr 18 07:27 pandaJob.out
[2025-04-18 10:00:17] -rw------- 1 boinc boinc       424 Apr 18 07:27 setup.sh.local
[2025-04-18 10:00:17] -rw------- 1 boinc boinc    990242 Apr 18 07:27 agis_schedconf.cvmfs.json
[2025-04-18 10:00:17] -rw------- 1 boinc boinc   1618536 Apr 18 07:27 agis_ddmendpoints.agis.ALL.json
[2025-04-18 10:00:17] drwx------ 4 boinc boinc      4096 Apr 18 07:27 pilot3
[2025-04-18 10:00:17] -rw------- 1 boinc boinc 194947646 Apr 18 09:59 HITS.44075483._058400.pool.root.1
[2025-04-18 10:00:17] -rw-r--r-- 1 boinc boinc       529 Apr 18 09:59 boinc_task_state.xml
[2025-04-18 10:00:17] -rw------- 1 boinc boinc      1017 Apr 18 09:59 memory_monitor_summary.json
[2025-04-18 10:00:17] -rw------- 1 boinc boinc    268085 Apr 18 09:59 log.44075483._058400.job.log.tgz.1
[2025-04-18 10:00:17] -rw------- 1 boinc boinc        95 Apr 18 09:59 pilot_heartbeat.json
[2025-04-18 10:00:17] -rw------- 1 boinc boinc      7655 Apr 18 09:59 heartbeat.json
[2025-04-18 10:00:17] -rw------- 1 boinc boinc      4870 Apr 18 09:59 pilotlog.txt
[2025-04-18 10:00:17] -rw------- 1 boinc boinc    850526 Apr 18 09:59 log.44075483._058400.job.log.1
[2025-04-18 10:00:17] -rw------- 1 boinc boinc       357 Apr 18 09:59 output.list
[2025-04-18 10:00:17] -rw-r--r-- 1 boinc boinc       620 Apr 18 09:59 runtime_log
[2025-04-18 10:00:17] -rw------- 1 boinc boinc   1136640 Apr 18 09:59 result.tar.gz
[2025-04-18 10:00:17] -rw-r--r-- 1 boinc boinc     11104 Apr 18 09:59 runtime_log.err
[2025-04-18 10:00:17] -rw------- 1 boinc boinc       660 Apr 18 09:59 OYELDmlwhP7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmMNdLDmyfVLpn.diag
[2025-04-18 10:00:17] -rw-r--r-- 1 boinc boinc      8192 Apr 18 10:00 boinc_mmap_file
[2025-04-18 10:00:17] -rw-r--r-- 1 boinc boinc        27 Apr 18 10:00 wrapper_checkpoint.txt
[2025-04-18 10:00:17] -rw-r--r-- 1 boinc boinc     20863 Apr 18 10:00 stderr.txt
[2025-04-18 10:00:17] HITS file was successfully produced:
[2025-04-18 10:00:17] -rw------- 1 boinc boinc 194947646 Apr 18 09:59 shared/HITS.pool.root.1
[2025-04-18 10:00:17]  *** Contents of shared directory: ***
[2025-04-18 10:00:17] total 413136
[2025-04-18 10:00:17] -rw-r--r-- 2 boinc boinc 226420455 Apr 18 07:27 ATLAS.root_0
[2025-04-18 10:00:17] -rw-r--r-- 2 boinc boinc    508892 Apr 18 07:27 input.tar.gz
[2025-04-18 10:00:17] -rw-r--r-- 2 boinc boinc     17569 Apr 18 07:27 start_atlas.sh
[2025-04-18 10:00:17] -rw------- 1 boinc boinc 194947646 Apr 18 09:59 HITS.pool.root.1
[2025-04-18 10:00:17] -rw------- 1 boinc boinc   1136640 Apr 18 09:59 result.tar.gz
10:00:19 (466700): run_atlas exited; CPU time 16946.867876
10:00:19 (466700): called boinc_finish(0)

</stderr_txt>
]]>

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