Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:13:38 (689621): wrapper (7.7.26015): starting
16:13:38 (689621): wrapper: running run_atlas (--nthreads 10)
[2025-04-17 16:13:38] Arguments: --nthreads 10
[2025-04-17 16:13:38] Threads: 10
[2025-04-17 16:13:38] Checking for CVMFS
[2025-04-17 16:13:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-17 16:13:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-17 16:13:40] Running cvmfs_config stat atlas.cern.ch
[2025-04-17 16:13:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-17 16:13:43] 2.12.6.0 1693551 122468 228380 144976 3 375 22952254 32935936 20932 130560 0 85383942 99.607 93288358 24839 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-04-17 16:13:43] CVMFS is ok
[2025-04-17 16:13:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-17 16:13:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-17 16:13:43] Further information can be found at the LHC@home message board.
[2025-04-17 16:13:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-17 16:13:43] Checking for apptainer binary...
[2025-04-17 16:13:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-17 16:13:43] Running /usr/bin/apptainer --version
[2025-04-17 16:13:43] apptainer version 1.4.0-1.el9
[2025-04-17 16:13:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-17 16:13:43] c-4-36.aglt2.org
[2025-04-17 16:13:43] apptainer works
[2025-04-17 16:13:43] Set ATHENA_PROC_NUMBER=10
[2025-04-17 16:13:43] Set ATHENA_CORE_NUMBER=10
[2025-04-17 16:13:44] Starting ATLAS job with PandaID=6605316969
[2025-04-17 16:13:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-18 09:53:04]  *** The last 200 lines of the pilot log: ***
[2025-04-18 09:53:04] 2025-04-18 13:52:21,150 | INFO     | monitor loop #2458: job 0:6605316969 is in state 'finished'
[2025-04-18 09:53:04] 2025-04-18 13:52:21,155 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-18 09:53:04] 2025-04-18 13:52:23,766 | INFO     | monitor loop #2459: job 0:6605316969 is in state 'finished'
[2025-04-18 09:53:04] 2025-04-18 13:52:23,766 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-18 09:53:04] 2025-04-18 13:52:25,059 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-18 09:53:04] 2025-04-18 13:52:25,065 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6605316969/memory_monitor_summary.json (trf name=prmon)
[2025-04-18 09:53:04] 2025-04-18 13:52:25,066 | INFO     | extracted standard info from prmon json
[2025-04-18 09:53:04] 2025-04-18 13:52:25,066 | INFO     | extracted standard memory fields from prmon json
[2025-04-18 09:53:04] 2025-04-18 13:52:25,066 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-18 09:53:04] 2025-04-18 13:52:25,067 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-18 09:53:04] 2025-04-18 13:52:25,067 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-18 09:53:04] 2025-04-18 13:52:25,218 | INFO     | fitting pss+swap vs Time
[2025-04-18 09:53:04] 2025-04-18 13:52:25,241 | INFO     | sum of square deviations: 343790023692.65125
[2025-04-18 09:53:04] 2025-04-18 13:52:25,397 | INFO     | sum of deviations: 976957935913.7126
[2025-04-18 09:53:04] 2025-04-18 13:52:25,397 | INFO     | mean x: 1744952716.9816425
[2025-04-18 09:53:04] 2025-04-18 13:52:25,397 | INFO     | mean y: 2167024.4057971016
[2025-04-18 09:53:04] 2025-04-18 13:52:25,397 | INFO     | -- intersect: -4956514982.53183
[2025-04-18 09:53:04] 2025-04-18 13:52:25,397 | INFO     | intersect: -4956514982.53183
[2025-04-18 09:53:04] 2025-04-18 13:52:25,459 | INFO     | chi2: 10.65494151652812
[2025-04-18 09:53:04] 2025-04-18 13:52:25,461 | INFO     | sum of square deviations: 338831768283.281
[2025-04-18 09:53:04] 2025-04-18 13:52:25,612 | INFO     | sum of deviations: 1165321263822.835
[2025-04-18 09:53:04] 2025-04-18 13:52:25,612 | INFO     | mean x: 1744952564.485437
[2025-04-18 09:53:04] 2025-04-18 13:52:25,613 | INFO     | mean y: 2172808.722330097
[2025-04-18 09:53:04] 2025-04-18 13:52:25,613 | INFO     | -- intersect: -5999124938.710292
[2025-04-18 09:53:04] 2025-04-18 13:52:25,613 | INFO     | intersect: -5999124938.710292
[2025-04-18 09:53:04] 2025-04-18 13:52:25,639 | INFO     | chi2: 8.427643348897663
[2025-04-18 09:53:04] 2025-04-18 13:52:25,639 | INFO     | current chi2=8.427643348897663 (change=20.903898573027703 %)
[2025-04-18 09:53:04] 2025-04-18 13:52:25,639 | INFO     | right removable region: 1029
[2025-04-18 09:53:04] 2025-04-18 13:52:25,641 | INFO     | sum of square deviations: 338831274427.2808
[2025-04-18 09:53:04] 2025-04-18 13:52:25,836 | INFO     | sum of deviations: 704018658399.5726
[2025-04-18 09:53:04] 2025-04-18 13:52:25,841 | INFO     | mean x: 1744952869.485437
[2025-04-18 09:53:04] 2025-04-18 13:52:25,841 | INFO     | mean y: 2175414.804854369
[2025-04-18 09:53:04] 2025-04-18 13:52:25,841 | INFO     | -- intersect: -3623462095.257031
[2025-04-18 09:53:04] 2025-04-18 13:52:25,841 | INFO     | intersect: -3623462095.257031
[2025-04-18 09:53:04] 2025-04-18 13:52:25,843 | INFO     | chi2: 7.30823702622484
[2025-04-18 09:53:04] 2025-04-18 13:52:25,843 | INFO     | current chi2=7.30823702622484 (change=31.409881369239027 %)
[2025-04-18 09:53:04] 2025-04-18 13:52:25,867 | INFO     | sum of square deviations: 333920621651.8072
[2025-04-18 09:53:04] 2025-04-18 13:52:26,037 | INFO     | sum of deviations: 527711594836.58276
[2025-04-18 09:53:04] 2025-04-18 13:52:26,038 | INFO     | mean x: 1744953021.9863415
[2025-04-18 09:53:04] 2025-04-18 13:52:26,038 | INFO     | mean y: 2180889.184390244
[2025-04-18 09:53:04] 2025-04-18 13:52:26,038 | INFO     | -- intersect: -2755456352.8411007
[2025-04-18 09:53:04] 2025-04-18 13:52:26,038 | INFO     | intersect: -2755456352.8411007
[2025-04-18 09:53:04] 2025-04-18 13:52:26,055 | INFO     | chi2: 5.989115800728256
[2025-04-18 09:53:04] 2025-04-18 13:52:26,055 | INFO     | current chi2=5.989115800728256 (change=18.04978712051971 %)
[2025-04-18 09:53:04] 2025-04-18 13:52:26,055 | INFO     | left removable region: 20
[2025-04-18 09:53:04] 2025-04-18 13:52:26,057 | INFO     | sum of square deviations: 318526139726.95184
[2025-04-18 09:53:04] 2025-04-18 13:52:26,265 | INFO     | sum of deviations: 434012500671.6007
[2025-04-18 09:53:04] 2025-04-18 13:52:26,265 | INFO     | mean x: 1744953143.9930625
[2025-04-18 09:53:04] 2025-04-18 13:52:26,267 | INFO     | mean y: 2196074.371655104
[2025-04-18 09:53:04] 2025-04-18 13:52:26,267 | INFO     | -- intersect: -2375415628.794695
[2025-04-18 09:53:04] 2025-04-18 13:52:26,267 | INFO     | intersect: -2375415628.794695
[2025-04-18 09:53:04] 2025-04-18 13:52:26,277 | INFO     | chi2: 1.991747473996656
[2025-04-18 09:53:04] 2025-04-18 13:52:26,277 | INFO     | -- intersect: -2375415628.794695
[2025-04-18 09:53:04] 2025-04-18 13:52:26,277 | INFO     | current memory leak: 1.36 B/s (using 1009 data points, chi2=1.99)
[2025-04-18 09:53:04] 2025-04-18 13:52:26,279 | INFO     | ..............................
[2025-04-18 09:53:04] 2025-04-18 13:52:26,279 | INFO     | . Timing measurements:
[2025-04-18 09:53:04] 2025-04-18 13:52:26,279 | INFO     | . get job = 1 s
[2025-04-18 09:53:04] 2025-04-18 13:52:26,279 | INFO     | . initial setup = 15 s
[2025-04-18 09:53:04] 2025-04-18 13:52:26,280 | INFO     | . payload setup = 71 s
[2025-04-18 09:53:04] 2025-04-18 13:52:26,321 | INFO     | . stage-in = 1 s
[2025-04-18 09:53:04] 2025-04-18 13:52:26,321 | INFO     | . payload execution = 63164 s
[2025-04-18 09:53:04] 2025-04-18 13:52:26,321 | INFO     | . stage-out = 5 s
[2025-04-18 09:53:04] 2025-04-18 13:52:26,321 | INFO     | . log creation = 0 s
[2025-04-18 09:53:04] 2025-04-18 13:52:26,321 | INFO     | ..............................
[2025-04-18 09:53:04] 2025-04-18 13:52:26,317 | INFO     | monitor loop #2460: job 0:6605316969 is in state 'finished'
[2025-04-18 09:53:04] 2025-04-18 13:52:26,372 | WARNING  | exception caught: deque index out of range
[2025-04-18 09:53:04] 2025-04-18 13:52:27,302 | INFO     | 
[2025-04-18 09:53:04] 2025-04-18 13:52:27,302 | INFO     | job summary report
[2025-04-18 09:53:04] 2025-04-18 13:52:27,302 | INFO     | --------------------------------------------------
[2025-04-18 09:53:04] 2025-04-18 13:52:27,302 | INFO     | PanDA job id: 6605316969
[2025-04-18 09:53:04] 2025-04-18 13:52:27,302 | INFO     | task id: 44075483
[2025-04-18 09:53:04] 2025-04-18 13:52:27,302 | INFO     | errors: (none)
[2025-04-18 09:53:04] 2025-04-18 13:52:27,303 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-18 09:53:04] 2025-04-18 13:52:27,303 | INFO     | pilot state: finished 
[2025-04-18 09:53:04] 2025-04-18 13:52:27,303 | INFO     | transexitcode: 0
[2025-04-18 09:53:04] 2025-04-18 13:52:27,303 | INFO     | exeerrorcode: 0
[2025-04-18 09:53:04] 2025-04-18 13:52:27,303 | INFO     | exeerrordiag: 
[2025-04-18 09:53:04] 2025-04-18 13:52:27,303 | INFO     | exitcode: 0
[2025-04-18 09:53:04] 2025-04-18 13:52:27,303 | INFO     | exitmsg: OK
[2025-04-18 09:53:04] 2025-04-18 13:52:27,303 | INFO     | cpuconsumptiontime: 51669 s
[2025-04-18 09:53:04] 2025-04-18 13:52:27,303 | INFO     | nevents: 400
[2025-04-18 09:53:04] 2025-04-18 13:52:27,303 | INFO     | neventsw: 0
[2025-04-18 09:53:04] 2025-04-18 13:52:27,303 | INFO     | pid: 725813
[2025-04-18 09:53:04] 2025-04-18 13:52:27,303 | INFO     | pgrp: 725813
[2025-04-18 09:53:04] 2025-04-18 13:52:27,304 | INFO     | corecount: 10
[2025-04-18 09:53:04] 2025-04-18 13:52:27,304 | INFO     | event service: False
[2025-04-18 09:53:04] 2025-04-18 13:52:27,304 | INFO     | sizes: {0: 2425995, 1: 2426680, 3: 2426708, 4: 2426879, 6: 2426907, 18: 2426935, 30: 2427091, 42: 2427119, 54: 2427119, 55: 2427381, 66: 2427409, 63241: 2476855, 6
[2025-04-18 09:53:04] 2025-04-18 13:52:27,304 | INFO     | --------------------------------------------------
[2025-04-18 09:53:04] 2025-04-18 13:52:27,304 | INFO     | 
[2025-04-18 09:53:04] 2025-04-18 13:52:27,304 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-18 09:53:04] 2025-04-18 13:52:27,427 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-18 09:53:04] 2025-04-18 13:52:27,427 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-18 09:53:04] 2025-04-18 13:52:27,427 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-18 09:53:04] 2025-04-18 13:52:27,428 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-18 09:53:04] 2025-04-18 13:52:27,428 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-18 09:53:04] 2025-04-18 13:52:27,428 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-18 09:53:04] 2025-04-18 13:52:27,428 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-18 09:53:04] 2025-04-18 13:52:27,428 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-18 09:53:04] 2025-04-18 13:52:27,428 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-18 09:53:04] 2025-04-18 13:52:27,428 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-18 09:53:04] 2025-04-18 13:52:27,428 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-18 09:53:04] 2025-04-18 13:52:27,428 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-18 09:53:04] 2025-04-18 13:52:27,429 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-18 09:53:04] 2025-04-18 13:52:27,429 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-18 09:53:04] 2025-04-18 13:52:27,429 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-18 09:53:04] 2025-04-18 13:52:27,429 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-18 09:53:04] 2025-04-18 13:52:27,429 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-18 09:53:04] 2025-04-18 13:52:27,429 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-18 09:53:04] 2025-04-18 13:52:27,429 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-18 09:53:04] 2025-04-18 13:52:27,429 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-18 09:53:04] 2025-04-18 13:52:27,430 | INFO     | job 6605316969 has completed (purged errors)
[2025-04-18 09:53:04] 2025-04-18 13:52:27,430 | INFO     | overall cleanup function is called
[2025-04-18 09:53:04] 2025-04-18 13:52:27,791 | INFO     | PID=698364 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-04-18 09:53:04] 2025-04-18 13:52:27,797 | INFO     | .. there are 42 such processes running
[2025-04-18 09:53:04] 2025-04-18 13:52:28,462 | INFO     | --- collectZombieJob: --- 10, [725813]
[2025-04-18 09:53:04] 2025-04-18 13:52:28,462 | INFO     | zombie collector waiting for pid 725813
[2025-04-18 09:53:04] 2025-04-18 13:52:28,462 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-18 09:53:04] 2025-04-18 13:52:28,462 | INFO     | collected zombie processes
[2025-04-18 09:53:04] 2025-04-18 13:52:28,462 | INFO     | will attempt to kill all subprocesses of pid=725813
[2025-04-18 09:53:04] 2025-04-18 13:52:30,829 | INFO     | process IDs to be killed: [725813] (in reverse order)
[2025-04-18 09:53:04] 2025-04-18 13:52:31,065 | WARNING  | found no corresponding commands to process id(s)
[2025-04-18 09:53:04] 2025-04-18 13:52:31,065 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-18 09:53:04] 2025-04-18 13:52:31,088 | INFO     | did not find any defunct processes belonging to 725813
[2025-04-18 09:53:04] 2025-04-18 13:52:31,121 | INFO     | did not find any defunct processes belonging to 725813
[2025-04-18 09:53:04] 2025-04-18 13:52:31,121 | INFO     | ready for new job
[2025-04-18 09:53:04] 2025-04-18 13:52:31,122 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-18 09:53:04] 2025-04-18 13:52:31,125 | INFO     | **************************************
[2025-04-18 09:53:04] 2025-04-18 13:52:31,129 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-18 09:53:04] 2025-04-18 13:52:31,129 | INFO     | **************************************
[2025-04-18 09:53:04] 2025-04-18 13:52:31,129 | INFO     | 
[2025-04-18 09:53:04] 2025-04-18 13:52:31,144 | INFO     | architecture information:
[2025-04-18 09:53:04] 2025-04-18 13:52:31,146 | INFO     | executing command: cat /etc/os-release
[2025-04-18 09:53:04] 2025-04-18 13:52:31,182 | INFO     | cat /etc/os-release:
[2025-04-18 09:53:04] NAME="CentOS Linux"
[2025-04-18 09:53:04] VERSION="7 (Core)"
[2025-04-18 09:53:04] ID="centos"
[2025-04-18 09:53:04] ID_LIKE="rhel fedora"
[2025-04-18 09:53:04] VERSION_ID="7"
[2025-04-18 09:53:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-18 09:53:04] ANSI_COLOR="0;31"
[2025-04-18 09:53:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-18 09:53:04] HOME_URL="https://www.centos.org/"
[2025-04-18 09:53:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-18 09:53:04] 
[2025-04-18 09:53:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-18 09:53:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-18 09:53:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-18 09:53:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-18 09:53:04] 
[2025-04-18 09:53:04] 2025-04-18 13:52:31,182 | INFO     | **************************************
[2025-04-18 09:53:04] 2025-04-18 13:52:31,687 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-18 09:53:04] 2025-04-18 13:52:31,854 | INFO     | sufficient remaining disk space (75785830400 B)
[2025-04-18 09:53:04] 2025-04-18 13:52:31,855 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-18 09:53:04] 2025-04-18 13:52:31,855 | INFO     | current server update state: UPDATING_FINAL
[2025-04-18 09:53:04] 2025-04-18 13:52:31,855 | INFO     | update_server=False
[2025-04-18 09:53:04] 2025-04-18 13:52:31,855 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-18 09:53:04] 2025-04-18 13:52:31,869 | INFO     | found 0 job(s) in 20 queues
[2025-04-18 09:53:04] 2025-04-18 13:52:31,869 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-18 09:53:04] 2025-04-18 13:52:31,870 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-18 09:53:04] 2025-04-18 13:52:31,893 | INFO     | all data control threads have been joined
[2025-04-18 09:53:04] 2025-04-18 13:52:32,179 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-18 09:53:04] 2025-04-18 13:52:32,232 | INFO     | all job control threads have been joined
[2025-04-18 09:53:04] 2025-04-18 13:52:32,326 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-18 09:53:04] 2025-04-18 13:52:32,398 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-18 09:53:04] 2025-04-18 13:52:32,402 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-18 09:53:04] 2025-04-18 13:52:32,402 | INFO     | aborting loop
[2025-04-18 09:53:04] 2025-04-18 13:52:32,861 | INFO     | [job] retrieve thread has finished
[2025-04-18 09:53:04] 2025-04-18 13:52:32,899 | INFO     | [data] control thread has finished
[2025-04-18 09:53:04] 2025-04-18 13:52:33,115 | INFO     | [payload] validate_pre thread has finished
[2025-04-18 09:53:04] 2025-04-18 13:52:33,193 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-18 09:53:04] 2025-04-18 13:52:33,200 | INFO     | [job] validate thread has finished
[2025-04-18 09:53:04] 2025-04-18 13:52:33,203 | INFO     | [data] copytool_in thread has finished
[2025-04-18 09:53:04] 2025-04-18 13:52:33,237 | INFO     | [job] control thread has finished
[2025-04-18 09:53:04] 2025-04-18 13:52:33,248 | INFO     | all payload control threads have been joined
[2025-04-18 09:53:04] 2025-04-18 13:52:33,332 | INFO     | [job] queue monitor thread has finished
[2025-04-18 09:53:04] 2025-04-18 13:52:33,415 | INFO     | [job] job monitor thread has finished
[2025-04-18 09:53:04] 2025-04-18 13:52:33,575 | INFO     | [payload] validate_post thread has finished
[2025-04-18 09:53:04] 2025-04-18 13:52:33,986 | INFO     | [job] create_data_payload thread has finished
[2025-04-18 09:53:04] 2025-04-18 13:52:34,149 | INFO     | [payload] execute_payloads thread has finished
[2025-04-18 09:53:04] 2025-04-18 13:52:34,193 | INFO     | [data] copytool_out thread has finished
[2025-04-18 09:53:04] 2025-04-18 13:52:34,254 | INFO     | [payload] control thread has finished
[2025-04-18 09:53:04] 2025-04-18 13:52:34,424 | INFO     | [payload] failed_post thread has finished
[2025-04-18 09:53:04] 2025-04-18 13:52:36,407 | INFO     | [data] queue_monitor thread has finished
[2025-04-18 09:53:04] 2025-04-18 13:52:36,936 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139796603008832)>', '<ExcThread(monitor, started 139795657377536)>']
[2025-04-18 09:53:04] 2025-04-18 13:52:37,906 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-18 09:53:04] 2025-04-18 13:52:37,906 | INFO     | [monitor] control thread has ended
[2025-04-18 09:53:04] 2025-04-18 13:52:41,969 | INFO     | all workflow threads have been joined
[2025-04-18 09:53:04] 2025-04-18 13:52:41,973 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-18 09:53:04] 2025-04-18 13:52:41,974 | INFO     | traces error code: 0
[2025-04-18 09:53:04] 2025-04-18 13:52:41,974 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-18 09:53:04] 2025-04-18 13:52:43,469 [wrapper] ==== pilot stdout END ====
[2025-04-18 09:53:04] 2025-04-18 13:52:43,569 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-18 09:53:04] 2025-04-18 13:52:43,590 [wrapper] pilotpid: 698364
[2025-04-18 09:53:04] 2025-04-18 13:52:43,610 [wrapper] Pilot exit status: 0
[2025-04-18 09:53:04] 2025-04-18 13:52:43,698 [wrapper] pandaids: 6605316969
[2025-04-18 09:53:04] 2025-04-18 13:52:43,811 [wrapper] cleanup supervisor_pilot 1976165 698365
[2025-04-18 09:53:04] 2025-04-18 13:52:43,824 [wrapper] Test setup, not cleaning
[2025-04-18 09:53:04] 2025-04-18 13:52:43,834 [wrapper] apfmon messages muted
[2025-04-18 09:53:04] 2025-04-18 13:52:43,837 [wrapper] ==== wrapper stdout END ====
[2025-04-18 09:53:04] 2025-04-18 13:52:43,840 [wrapper] ==== wrapper stderr END ====
[2025-04-18 09:53:04]  *** Error codes and diagnostics ***
[2025-04-18 09:53:04]     "exeErrorCode": 0,
[2025-04-18 09:53:04]     "exeErrorDiag": "",
[2025-04-18 09:53:04]     "pilotErrorCode": 0,
[2025-04-18 09:53:04]     "pilotErrorDiag": "",
[2025-04-18 09:53:04]  *** Listing of results directory ***
[2025-04-18 09:53:04] total 425240
[2025-04-18 09:53:04] -rw-r--r--. 1 boincer umatlas      5111 Apr 17 09:19 queuedata.json
[2025-04-18 09:53:04] -rw-r--r--. 1 boincer umatlas    495897 Apr 17 09:20 pilot3.tar.gz
[2025-04-18 09:53:04] -rwx------. 1 boincer umatlas     37140 Apr 17 09:21 runpilot2-wrapper.sh
[2025-04-18 09:53:04] -rw-r--r--. 1 boincer umatlas       100 Apr 17 16:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-18 09:53:04] -rwxr-xr-x. 1 boincer umatlas      7986 Apr 17 16:13 run_atlas
[2025-04-18 09:53:04] -rw-r--r--. 1 boincer umatlas       105 Apr 17 16:13 job.xml
[2025-04-18 09:53:04] -rw-r--r--. 2 boincer umatlas 223529658 Apr 17 16:13 EVNT.44075481._002187.pool.root.1
[2025-04-18 09:53:04] drwxrwx--x. 2 boincer umatlas      4096 Apr 17 16:13 shared
[2025-04-18 09:53:04] -rw-r--r--. 2 boincer umatlas    508889 Apr 17 16:13 input.tar.gz
[2025-04-18 09:53:04] -rw-r--r--. 2 boincer umatlas     17569 Apr 17 16:13 start_atlas.sh
[2025-04-18 09:53:04] -rw-r--r--. 1 boincer umatlas         0 Apr 17 16:13 boinc_lockfile
[2025-04-18 09:53:04] -rw-r--r--. 1 boincer umatlas      2578 Apr 17 16:13 pandaJob.out
[2025-04-18 09:53:04] -rw-r--r--. 1 boincer umatlas      2076 Apr 17 16:13 stderr.txt
[2025-04-18 09:53:04] -rw-------. 1 boincer umatlas       467 Apr 17 16:13 setup.sh.local
[2025-04-18 09:53:04] -rw-------. 1 boincer umatlas    990274 Apr 17 16:15 agis_schedconf.cvmfs.json
[2025-04-18 09:53:04] drwx------. 4 boincer umatlas      4096 Apr 17 16:15 pilot3
[2025-04-18 09:53:04] -rw-r--r--. 1 boincer umatlas      6673 Apr 18 09:48 init_data.xml
[2025-04-18 09:53:04] -rw-------. 1 boincer umatlas 199037028 Apr 18 09:48 HITS.44075483._056194.pool.root.1
[2025-04-18 09:53:04] -rw-r--r--. 1 boincer umatlas       531 Apr 18 09:48 boinc_task_state.xml
[2025-04-18 09:53:04] -rw-------. 1 boincer umatlas      1056 Apr 18 09:51 memory_monitor_summary.json
[2025-04-18 09:53:04] -rw-------. 1 boincer umatlas        95 Apr 18 09:51 pilot_heartbeat.json
[2025-04-18 09:53:04] -rw-------. 1 boincer umatlas   1618536 Apr 18 09:51 agis_ddmendpoints.agis.ALL.json
[2025-04-18 09:53:04] -rw-------. 1 boincer umatlas    759802 Apr 18 09:51 log.44075483._056194.job.log.tgz.1
[2025-04-18 09:53:04] -rw-------. 1 boincer umatlas      7756 Apr 18 09:52 heartbeat.json
[2025-04-18 09:53:04] -rw-------. 1 boincer umatlas      4353 Apr 18 09:52 pilotlog.txt
[2025-04-18 09:53:04] -rw-------. 1 boincer umatlas   3756435 Apr 18 09:52 log.44075483._056194.job.log.1
[2025-04-18 09:53:04] -rw-------. 1 boincer umatlas       357 Apr 18 09:52 output.list
[2025-04-18 09:53:04] -rw-r--r--. 1 boincer umatlas       620 Apr 18 09:52 runtime_log
[2025-04-18 09:53:04] -rw-------. 1 boincer umatlas   4536320 Apr 18 09:52 result.tar.gz
[2025-04-18 09:53:04] -rw-r--r--. 1 boincer umatlas     11411 Apr 18 09:52 runtime_log.err
[2025-04-18 09:53:04] -rw-------. 1 boincer umatlas       659 Apr 18 09:52 HmuKDmXMeP7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmH1cLDmkewORo.diag
[2025-04-18 09:53:04] -rw-r--r--. 1 boincer umatlas      8192 Apr 18 09:53 boinc_mmap_file
[2025-04-18 09:53:04] -rw-r--r--. 1 boincer umatlas        28 Apr 18 09:53 wrapper_checkpoint.txt
[2025-04-18 09:53:04] HITS file was successfully produced:
[2025-04-18 09:53:04] -rw-------. 1 boincer umatlas 199037028 Apr 18 09:48 shared/HITS.pool.root.1
[2025-04-18 09:53:04]  *** Contents of shared directory: ***
[2025-04-18 09:53:04] total 417624
[2025-04-18 09:53:04] -rw-r--r--. 2 boincer umatlas 223529658 Apr 17 16:13 ATLAS.root_0
[2025-04-18 09:53:04] -rw-r--r--. 2 boincer umatlas    508889 Apr 17 16:13 input.tar.gz
[2025-04-18 09:53:04] -rw-r--r--. 2 boincer umatlas     17569 Apr 17 16:13 start_atlas.sh
[2025-04-18 09:53:04] -rw-------. 1 boincer umatlas 199037028 Apr 18 09:48 HITS.pool.root.1
[2025-04-18 09:53:04] -rw-------. 1 boincer umatlas   4536320 Apr 18 09:52 result.tar.gz
09:53:06 (689621): run_atlas exited; CPU time 54102.166169
09:53:06 (689621): called boinc_finish(0)

</stderr_txt>
]]>

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