Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
15:26:22 (16729): wrapper (7.7.26015): starting
15:26:22 (16729): wrapper: running run_atlas (--nthreads 12)
[2025-04-17 15:26:22] Arguments: --nthreads 12
[2025-04-17 15:26:22] Threads: 12
[2025-04-17 15:26:22] Checking for CVMFS
[2025-04-17 15:26:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-17 15:26:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-17 15:26:23] Running cvmfs_config stat atlas.cern.ch
[2025-04-17 15:26:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-17 15:26:23] 2.11.2.0 21248 368237 166204 144976 2 55 19487400 20275201 1 130560 0 22126178 99.969 7297023 52931 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-17 15:26:23] CVMFS is ok
[2025-04-17 15:26:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-17 15:26:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-17 15:26:23] Further information can be found at the LHC@home message board.
[2025-04-17 15:26:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-17 15:26:23] Checking for apptainer binary...
[2025-04-17 15:26:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-17 15:26:23] Running /usr/bin/apptainer --version
[2025-04-17 15:26:23] apptainer version 1.3.2-1.el7
[2025-04-17 15:26:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-17 15:26:24] c-205-27.aglt2.org
[2025-04-17 15:26:24] apptainer works
[2025-04-17 15:26:24] Set ATHENA_PROC_NUMBER=12
[2025-04-17 15:26:24] Set ATHENA_CORE_NUMBER=12
[2025-04-17 15:26:24] Starting ATLAS job with PandaID=6605316744
[2025-04-17 15:26:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-17 16:49:21]  *** The last 200 lines of the pilot log: ***
[2025-04-17 16:49:21]  mtime=0
[2025-04-17 16:49:21]  protocol_id=None
[2025-04-17 16:49:21]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-17 16:49:21]  replicas=None
[2025-04-17 16:49:21]  scope=mc23_13p6TeV
[2025-04-17 16:49:21]  status=None
[2025-04-17 16:49:21]  status_code=0
[2025-04-17 16:49:21]  storage_token=
[2025-04-17 16:49:21]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6605316744/log.44075483._055969.job.log.tgz.1
[2025-04-17 16:49:21]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b2/fd/log.44075483._055969.job.log.tgz.1
[2025-04-17 16:49:21]  workdir=None
[2025-04-17 16:49:21] ]
[2025-04-17 16:49:21] 2025-04-17 20:48:54,211 | INFO     | transferring file log.44075483._055969.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6605316744/log.44075483._055969.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-04-17 16:49:21] 2025-04-17 20:48:54,211 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6605316744/log.44075483._055969.job.log.tgz.1 /tmp/boinchome/slots/0/log.44075483._055969.job
[2025-04-17 16:49:21] 2025-04-17 20:48:54,234 | INFO     | adding to output.list: log.44075483._055969.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b2/fd/log.44075483._055969.job.log.tg
[2025-04-17 16:49:21] 2025-04-17 20:48:54,235 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-17 16:49:21] 2025-04-17 20:48:54,235 | INFO     | summary of transferred files:
[2025-04-17 16:49:21] 2025-04-17 20:48:54,235 | INFO     |  -- lfn=log.44075483._055969.job.log.tgz.1, status_code=0, status=transferred
[2025-04-17 16:49:21] 2025-04-17 20:48:54,235 | INFO     | stage-out finished correctly
[2025-04-17 16:49:21] 2025-04-17 20:48:54,281 | INFO     | monitor loop #367: job 0:6605316744 is in state 'finished'
[2025-04-17 16:49:21] 2025-04-17 20:48:54,281 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-17 16:49:21] 2025-04-17 20:48:56,789 | INFO     | monitor loop #368: job 0:6605316744 is in state 'finished'
[2025-04-17 16:49:21] 2025-04-17 20:48:56,789 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-17 16:49:21] 2025-04-17 20:48:57,107 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-17 16:49:21] 2025-04-17 20:48:57,189 | INFO     | job 6605316744 has state=finished
[2025-04-17 16:49:21] 2025-04-17 20:48:57,189 | INFO     | preparing for final server update for job 6605316744 in state='finished'
[2025-04-17 16:49:21] 2025-04-17 20:48:57,190 | INFO     | this job has now completed (state=finished)
[2025-04-17 16:49:21] 2025-04-17 20:48:57,190 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-17 16:49:21] 2025-04-17 20:48:57,190 | INFO     | log transfer has been attempted: DONE
[2025-04-17 16:49:21] 2025-04-17 20:48:57,190 | INFO     | job 6605316744 has finished - writing final server update
[2025-04-17 16:49:21] 2025-04-17 20:48:57,191 | INFO     | total number of processed events: 400 (read)
[2025-04-17 16:49:21] 2025-04-17 20:48:57,192 | INFO     | executing command: lscpu
[2025-04-17 16:49:21] 2025-04-17 20:48:57,221 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-17 16:49:21] 2025-04-17 20:48:59,292 | INFO     | monitor loop #369: job 0:6605316744 is in state 'finished'
[2025-04-17 16:49:21] 2025-04-17 20:48:59,292 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-17 16:49:21] 2025-04-17 20:49:01,795 | INFO     | monitor loop #370: job 0:6605316744 is in state 'finished'
[2025-04-17 16:49:21] 2025-04-17 20:49:01,795 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-17 16:49:21] 2025-04-17 20:49:01,892 | INFO     | CPU arch script returned: x86-64-v2
[2025-04-17 16:49:21] 2025-04-17 20:49:01,892 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6605316744/memory_monitor_summary.json (trf name=prmon)
[2025-04-17 16:49:21] 2025-04-17 20:49:01,893 | INFO     | extracted standard info from prmon json
[2025-04-17 16:49:21] 2025-04-17 20:49:01,893 | INFO     | extracted standard memory fields from prmon json
[2025-04-17 16:49:21] 2025-04-17 20:49:01,893 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-17 16:49:21] 2025-04-17 20:49:01,894 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-17 16:49:21] 2025-04-17 20:49:01,894 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-17 16:49:21] 2025-04-17 20:49:01,897 | INFO     | fitting pss+swap vs Time
[2025-04-17 16:49:21] 2025-04-17 20:49:01,897 | INFO     | sum of square deviations: 125630262.5
[2025-04-17 16:49:21] 2025-04-17 20:49:01,898 | INFO     | sum of deviations: 16926785171.500004
[2025-04-17 16:49:21] 2025-04-17 20:49:01,898 | INFO     | mean x: 1744920557.5
[2025-04-17 16:49:21] 2025-04-17 20:49:01,898 | INFO     | mean y: 2648674.9324324327
[2025-04-17 16:49:21] 2025-04-17 20:49:01,898 | INFO     | -- intersect: -235099108102.31317
[2025-04-17 16:49:21] 2025-04-17 20:49:01,898 | INFO     | intersect: -235099108102.31317
[2025-04-17 16:49:21] 2025-04-17 20:49:01,899 | INFO     | chi2: 2.4272367910075228
[2025-04-17 16:49:21] 2025-04-17 20:49:01,899 | INFO     | -- intersect: -235099108102.31317
[2025-04-17 16:49:21] 2025-04-17 20:49:01,899 | INFO     | current memory leak: 134.73 B/s (using 74 data points, chi2=2.43)
[2025-04-17 16:49:21] 2025-04-17 20:49:01,899 | INFO     | ..............................
[2025-04-17 16:49:21] 2025-04-17 20:49:01,900 | INFO     | . Timing measurements:
[2025-04-17 16:49:21] 2025-04-17 20:49:01,900 | INFO     | . get job = 0 s
[2025-04-17 16:49:21] 2025-04-17 20:49:01,900 | INFO     | . initial setup = 2 s
[2025-04-17 16:49:21] 2025-04-17 20:49:01,900 | INFO     | . payload setup = 7 s
[2025-04-17 16:49:21] 2025-04-17 20:49:01,900 | INFO     | . stage-in = 0 s
[2025-04-17 16:49:21] 2025-04-17 20:49:01,900 | INFO     | . payload execution = 4908 s
[2025-04-17 16:49:21] 2025-04-17 20:49:01,900 | INFO     | . stage-out = 0 s
[2025-04-17 16:49:21] 2025-04-17 20:49:01,900 | INFO     | . log creation = 0 s
[2025-04-17 16:49:21] 2025-04-17 20:49:01,900 | INFO     | ..............................
[2025-04-17 16:49:21] 2025-04-17 20:49:02,481 | INFO     | 
[2025-04-17 16:49:21] 2025-04-17 20:49:02,481 | INFO     | job summary report
[2025-04-17 16:49:21] 2025-04-17 20:49:02,481 | INFO     | --------------------------------------------------
[2025-04-17 16:49:21] 2025-04-17 20:49:02,482 | INFO     | PanDA job id: 6605316744
[2025-04-17 16:49:21] 2025-04-17 20:49:02,482 | INFO     | task id: 44075483
[2025-04-17 16:49:21] 2025-04-17 20:49:02,482 | INFO     | errors: (none)
[2025-04-17 16:49:21] 2025-04-17 20:49:02,482 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-17 16:49:21] 2025-04-17 20:49:02,482 | INFO     | pilot state: finished 
[2025-04-17 16:49:21] 2025-04-17 20:49:02,482 | INFO     | transexitcode: 0
[2025-04-17 16:49:21] 2025-04-17 20:49:02,483 | INFO     | exeerrorcode: 0
[2025-04-17 16:49:21] 2025-04-17 20:49:02,483 | INFO     | exeerrordiag: 
[2025-04-17 16:49:21] 2025-04-17 20:49:02,483 | INFO     | exitcode: 0
[2025-04-17 16:49:21] 2025-04-17 20:49:02,483 | INFO     | exitmsg: OK
[2025-04-17 16:49:21] 2025-04-17 20:49:02,483 | INFO     | cpuconsumptiontime: 46124 s
[2025-04-17 16:49:21] 2025-04-17 20:49:02,483 | INFO     | nevents: 400
[2025-04-17 16:49:21] 2025-04-17 20:49:02,484 | INFO     | neventsw: 0
[2025-04-17 16:49:21] 2025-04-17 20:49:02,484 | INFO     | pid: 27660
[2025-04-17 16:49:21] 2025-04-17 20:49:02,484 | INFO     | pgrp: 27660
[2025-04-17 16:49:21] 2025-04-17 20:49:02,484 | INFO     | corecount: 12
[2025-04-17 16:49:21] 2025-04-17 20:49:02,484 | INFO     | event service: False
[2025-04-17 16:49:21] 2025-04-17 20:49:02,484 | INFO     | sizes: {0: 2426652, 1: 2426851, 5: 2427057, 11: 2427113, 4919: 2453212, 4920: 2462153, 4923: 2462337, 4928: 2462507}
[2025-04-17 16:49:21] 2025-04-17 20:49:02,484 | INFO     | --------------------------------------------------
[2025-04-17 16:49:21] 2025-04-17 20:49:02,485 | INFO     | 
[2025-04-17 16:49:21] 2025-04-17 20:49:02,485 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-17 16:49:21] 2025-04-17 20:49:02,509 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-17 16:49:21] 2025-04-17 20:49:02,509 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-17 16:49:21] 2025-04-17 20:49:02,509 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-17 16:49:21] 2025-04-17 20:49:02,509 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-17 16:49:21] 2025-04-17 20:49:02,509 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-17 16:49:21] 2025-04-17 20:49:02,510 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-17 16:49:21] 2025-04-17 20:49:02,510 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-17 16:49:21] 2025-04-17 20:49:02,510 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-17 16:49:21] 2025-04-17 20:49:02,510 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-17 16:49:21] 2025-04-17 20:49:02,510 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-17 16:49:21] 2025-04-17 20:49:02,510 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-17 16:49:21] 2025-04-17 20:49:02,511 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-17 16:49:21] 2025-04-17 20:49:02,511 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-17 16:49:21] 2025-04-17 20:49:02,511 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-17 16:49:21] 2025-04-17 20:49:02,511 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-17 16:49:21] 2025-04-17 20:49:02,511 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-17 16:49:21] 2025-04-17 20:49:02,511 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-17 16:49:21] 2025-04-17 20:49:02,512 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-17 16:49:21] 2025-04-17 20:49:02,512 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-17 16:49:21] 2025-04-17 20:49:02,512 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-17 16:49:21] 2025-04-17 20:49:02,512 | INFO     | job 6605316744 has completed (purged errors)
[2025-04-17 16:49:21] 2025-04-17 20:49:02,512 | INFO     | overall cleanup function is called
[2025-04-17 16:49:21] 2025-04-17 20:49:02,737 | INFO     | PID=20412 has CPU usage=6.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-04-17 16:49:21] 2025-04-17 20:49:03,521 | INFO     | --- collectZombieJob: --- 10, [27660]
[2025-04-17 16:49:21] 2025-04-17 20:49:03,521 | INFO     | zombie collector waiting for pid 27660
[2025-04-17 16:49:21] 2025-04-17 20:49:03,521 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-17 16:49:21] 2025-04-17 20:49:03,521 | INFO     | collected zombie processes
[2025-04-17 16:49:21] 2025-04-17 20:49:03,522 | INFO     | will attempt to kill all subprocesses of pid=27660
[2025-04-17 16:49:21] 2025-04-17 20:49:03,610 | INFO     | process IDs to be killed: [27660] (in reverse order)
[2025-04-17 16:49:21] 2025-04-17 20:49:03,661 | WARNING  | found no corresponding commands to process id(s)
[2025-04-17 16:49:21] 2025-04-17 20:49:03,662 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-17 16:49:21] 2025-04-17 20:49:03,666 | INFO     | did not find any defunct processes belonging to 27660
[2025-04-17 16:49:21] 2025-04-17 20:49:03,669 | INFO     | did not find any defunct processes belonging to 27660
[2025-04-17 16:49:21] 2025-04-17 20:49:03,669 | INFO     | ready for new job
[2025-04-17 16:49:21] 2025-04-17 20:49:03,669 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-17 16:49:21] 2025-04-17 20:49:03,670 | INFO     | **************************************
[2025-04-17 16:49:21] 2025-04-17 20:49:03,670 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-17 16:49:21] 2025-04-17 20:49:03,670 | INFO     | **************************************
[2025-04-17 16:49:21] 2025-04-17 20:49:03,670 | INFO     | 
[2025-04-17 16:49:21] 2025-04-17 20:49:03,671 | INFO     | architecture information:
[2025-04-17 16:49:21] 2025-04-17 20:49:03,672 | INFO     | executing command: cat /etc/os-release
[2025-04-17 16:49:21] 2025-04-17 20:49:03,686 | INFO     | cat /etc/os-release:
[2025-04-17 16:49:21] NAME="CentOS Linux"
[2025-04-17 16:49:21] VERSION="7 (Core)"
[2025-04-17 16:49:21] ID="centos"
[2025-04-17 16:49:21] ID_LIKE="rhel fedora"
[2025-04-17 16:49:21] VERSION_ID="7"
[2025-04-17 16:49:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-17 16:49:21] ANSI_COLOR="0;31"
[2025-04-17 16:49:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-17 16:49:21] HOME_URL="https://www.centos.org/"
[2025-04-17 16:49:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-17 16:49:21] 
[2025-04-17 16:49:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-17 16:49:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-17 16:49:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-17 16:49:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-17 16:49:21] 
[2025-04-17 16:49:21] 2025-04-17 20:49:03,686 | INFO     | **************************************
[2025-04-17 16:49:21] 2025-04-17 20:49:04,189 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-17 16:49:21] 2025-04-17 20:49:04,204 | INFO     | sufficient remaining disk space (29402071040 B)
[2025-04-17 16:49:21] 2025-04-17 20:49:04,205 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-17 16:49:21] 2025-04-17 20:49:04,205 | INFO     | current server update state: UPDATING_FINAL
[2025-04-17 16:49:21] 2025-04-17 20:49:04,205 | INFO     | update_server=False
[2025-04-17 16:49:21] 2025-04-17 20:49:04,205 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-17 16:49:21] 2025-04-17 20:49:04,298 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-04-17 16:49:21] 2025-04-17 20:49:04,298 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-04-17 16:49:21] 2025-04-17 20:49:04,298 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-17 16:49:21] 2025-04-17 20:49:04,298 | INFO     | will abort loop
[2025-04-17 16:49:21] 2025-04-17 20:49:04,743 | INFO     | found 0 job(s) in 20 queues
[2025-04-17 16:49:21] 2025-04-17 20:49:04,743 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-17 16:49:21] 2025-04-17 20:49:04,743 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-17 16:49:21] 2025-04-17 20:49:04,835 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-17 16:49:21] 2025-04-17 20:49:04,859 | INFO     | all data control threads have been joined
[2025-04-17 16:49:21] 2025-04-17 20:49:05,211 | INFO     | [job] retrieve thread has finished
[2025-04-17 16:49:21] 2025-04-17 20:49:05,260 | INFO     | [job] validate thread has finished
[2025-04-17 16:49:21] 2025-04-17 20:49:05,304 | INFO     | [job] job monitor thread has finished
[2025-04-17 16:49:21] 2025-04-17 20:49:05,415 | INFO     | all payload control threads have been joined
[2025-04-17 16:49:21] 2025-04-17 20:49:05,467 | INFO     | [payload] execute_payloads thread has finished
[2025-04-17 16:49:21] 2025-04-17 20:49:05,504 | INFO     | [job] create_data_payload thread has finished
[2025-04-17 16:49:21] 2025-04-17 20:49:05,520 | INFO     | [payload] validate_pre thread has finished
[2025-04-17 16:49:21] 2025-04-17 20:49:05,600 | INFO     | [payload] failed_post thread has finished
[2025-04-17 16:49:21] 2025-04-17 20:49:05,665 | INFO     | all job control threads have been joined
[2025-04-17 16:49:21] 2025-04-17 20:49:05,864 | INFO     | [data] control thread has finished
[2025-04-17 16:49:21] 2025-04-17 20:49:05,977 | INFO     | [data] copytool_in thread has finished
[2025-04-17 16:49:21] 2025-04-17 20:49:06,370 | INFO     | [payload] validate_post thread has finished
[2025-04-17 16:49:21] 2025-04-17 20:49:06,420 | INFO     | [payload] control thread has finished
[2025-04-17 16:49:21] 2025-04-17 20:49:06,666 | INFO     | [job] control thread has finished
[2025-04-17 16:49:21] 2025-04-17 20:49:06,841 | INFO     | [data] copytool_out thread has finished
[2025-04-17 16:49:21] 2025-04-17 20:49:06,998 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-17 16:49:21] 2025-04-17 20:49:07,698 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-17 16:49:21] 2025-04-17 20:49:08,003 | INFO     | [job] queue monitor thread has finished
[2025-04-17 16:49:21] 2025-04-17 20:49:11,704 | INFO     | [data] queue_monitor thread has finished
[2025-04-17 16:49:21] 2025-04-17 20:49:14,517 | INFO     | job.realtimelogging is not enabled
[2025-04-17 16:49:21] 2025-04-17 20:49:15,518 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-17 16:49:21] 2025-04-17 20:49:16,295 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140377387419456)>', '<ExcThread(monitor, started 140376467810048)>']
[2025-04-17 16:49:21] 2025-04-17 20:49:16,804 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-17 16:49:21] 2025-04-17 20:49:16,804 | INFO     | [monitor] control thread has ended
[2025-04-17 16:49:21] 2025-04-17 20:49:21,320 | INFO     | all workflow threads have been joined
[2025-04-17 16:49:21] 2025-04-17 20:49:21,320 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-17 16:49:21] 2025-04-17 20:49:21,321 | INFO     | traces error code: 0
[2025-04-17 16:49:21] 2025-04-17 20:49:21,321 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-17 16:49:21] 2025-04-17 20:49:21,421 [wrapper] ==== pilot stdout END ====
[2025-04-17 16:49:21] 2025-04-17 20:49:21,425 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-17 16:49:21] 2025-04-17 20:49:21,429 [wrapper] pilotpid: 20412
[2025-04-17 16:49:21] 2025-04-17 20:49:21,432 [wrapper] Pilot exit status: 0
[2025-04-17 16:49:21] 2025-04-17 20:49:21,447 [wrapper] pandaids: 6605316744
[2025-04-17 16:49:21] 2025-04-17 20:49:21,485 [wrapper] cleanup supervisor_pilot 12123 20413
[2025-04-17 16:49:21] 2025-04-17 20:49:21,489 [wrapper] Test setup, not cleaning
[2025-04-17 16:49:21] 2025-04-17 20:49:21,493 [wrapper] apfmon messages muted
[2025-04-17 16:49:21] 2025-04-17 20:49:21,497 [wrapper] ==== wrapper stdout END ====
[2025-04-17 16:49:21] 2025-04-17 20:49:21,501 [wrapper] ==== wrapper stderr END ====
[2025-04-17 16:49:21]  *** Error codes and diagnostics ***
[2025-04-17 16:49:21]     "exeErrorCode": 0,
[2025-04-17 16:49:21]     "exeErrorDiag": "",
[2025-04-17 16:49:21]     "pilotErrorCode": 0,
[2025-04-17 16:49:21]     "pilotErrorDiag": "",
[2025-04-17 16:49:21]  *** Listing of results directory ***
[2025-04-17 16:49:21] total 408920
[2025-04-17 16:49:21] -rw-r--r-- 1 boincer umatlas    495897 Apr 17 08:35 pilot3.tar.gz
[2025-04-17 16:49:21] -rwx------ 1 boincer umatlas     37140 Apr 17 08:52 runpilot2-wrapper.sh
[2025-04-17 16:49:21] -rw-r--r-- 1 boincer umatlas      5111 Apr 17 08:52 queuedata.json
[2025-04-17 16:49:21] -rw-r--r-- 1 boincer umatlas       100 Apr 17 15:26 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-17 16:49:21] -rwxr-xr-x 1 boincer umatlas      7986 Apr 17 15:26 run_atlas
[2025-04-17 16:49:21] -rw-r--r-- 1 boincer umatlas       105 Apr 17 15:26 job.xml
[2025-04-17 16:49:21] -rw-r--r-- 2 boincer umatlas 223743527 Apr 17 15:26 EVNT.44075481._002178.pool.root.1
[2025-04-17 16:49:21] -rw-r--r-- 2 boincer umatlas     17569 Apr 17 15:26 start_atlas.sh
[2025-04-17 16:49:21] drwxrwx--x 2 boincer umatlas      4096 Apr 17 15:26 shared
[2025-04-17 16:49:21] -rw-r--r-- 2 boincer umatlas    508892 Apr 17 15:26 input.tar.gz
[2025-04-17 16:49:21] -rw-r--r-- 1 boincer umatlas         0 Apr 17 15:26 boinc_lockfile
[2025-04-17 16:49:21] -rw-r--r-- 1 boincer umatlas      2578 Apr 17 15:26 pandaJob.out
[2025-04-17 16:49:21] -rw------- 1 boincer umatlas       424 Apr 17 15:26 setup.sh.local
[2025-04-17 16:49:21] -rw------- 1 boincer umatlas    990274 Apr 17 15:26 agis_schedconf.cvmfs.json
[2025-04-17 16:49:21] -rw------- 1 boincer umatlas   1618536 Apr 17 15:26 agis_ddmendpoints.agis.ALL.json
[2025-04-17 16:49:21] drwx------ 4 boincer umatlas      4096 Apr 17 15:26 pilot3
[2025-04-17 16:49:21] -rw-r--r-- 1 boincer umatlas      5868 Apr 17 16:46 init_data.xml
[2025-04-17 16:49:21] -rw------- 1 boincer umatlas 189468477 Apr 17 16:48 HITS.44075483._055969.pool.root.1
[2025-04-17 16:49:21] -rw------- 1 boincer umatlas        95 Apr 17 16:48 pilot_heartbeat.json
[2025-04-17 16:49:21] -rw-r--r-- 1 boincer umatlas       529 Apr 17 16:48 boinc_task_state.xml
[2025-04-17 16:49:21] -rw------- 1 boincer umatlas      1048 Apr 17 16:48 memory_monitor_summary.json
[2025-04-17 16:49:21] -rw------- 1 boincer umatlas    365739 Apr 17 16:48 log.44075483._055969.job.log.tgz.1
[2025-04-17 16:49:21] -rw------- 1 boincer umatlas      7751 Apr 17 16:49 heartbeat.json
[2025-04-17 16:49:21] -rw-r--r-- 1 boincer umatlas      8192 Apr 17 16:49 boinc_mmap_file
[2025-04-17 16:49:21] -rw-r--r-- 1 boincer umatlas        27 Apr 17 16:49 wrapper_checkpoint.txt
[2025-04-17 16:49:21] -rw------- 1 boincer umatlas      4611 Apr 17 16:49 pilotlog.txt
[2025-04-17 16:49:21] -rw------- 1 boincer umatlas    469870 Apr 17 16:49 log.44075483._055969.job.log.1
[2025-04-17 16:49:21] -rw------- 1 boincer umatlas       357 Apr 17 16:49 output.list
[2025-04-17 16:49:21] -rw-r--r-- 1 boincer umatlas       620 Apr 17 16:49 runtime_log
[2025-04-17 16:49:21] -rw------- 1 boincer umatlas    849920 Apr 17 16:49 result.tar.gz
[2025-04-17 16:49:21] -rw-r--r-- 1 boincer umatlas     11015 Apr 17 16:49 runtime_log.err
[2025-04-17 16:49:21] -rw------- 1 boincer umatlas       658 Apr 17 16:49 i1dNDm1tdP7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmVz3KDminNVVo.diag
[2025-04-17 16:49:21] -rw-r--r-- 1 boincer umatlas     21704 Apr 17 16:49 stderr.txt
[2025-04-17 16:49:21] HITS file was successfully produced:
[2025-04-17 16:49:21] -rw------- 1 boincer umatlas 189468477 Apr 17 16:48 shared/HITS.pool.root.1
[2025-04-17 16:49:21]  *** Contents of shared directory: ***
[2025-04-17 16:49:21] total 404880
[2025-04-17 16:49:21] -rw-r--r-- 2 boincer umatlas 223743527 Apr 17 15:26 ATLAS.root_0
[2025-04-17 16:49:21] -rw-r--r-- 2 boincer umatlas     17569 Apr 17 15:26 start_atlas.sh
[2025-04-17 16:49:21] -rw-r--r-- 2 boincer umatlas    508892 Apr 17 15:26 input.tar.gz
[2025-04-17 16:49:21] -rw------- 1 boincer umatlas 189468477 Apr 17 16:48 HITS.pool.root.1
[2025-04-17 16:49:21] -rw------- 1 boincer umatlas    849920 Apr 17 16:49 result.tar.gz
16:49:23 (16729): run_atlas exited; CPU time 46107.588877
16:49:23 (16729): called boinc_finish(0)

</stderr_txt>
]]>

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