Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
14:31:49 (10154): wrapper (7.7.26015): starting
14:31:49 (10154): wrapper: running run_atlas (--nthreads 4)
[2025-04-17 14:31:49] Arguments: --nthreads 4
[2025-04-17 14:31:49] Threads: 4
[2025-04-17 14:31:49] Checking for CVMFS
[2025-04-17 14:31:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-17 14:31:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-17 14:31:49] Running cvmfs_config stat atlas.cern.ch
[2025-04-17 14:31:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-17 14:31:50] 2.11.2.0 26179 380983 89900 144975 3 58 16492803 20275200 1 130560 0 18733819 99.988 6877673 64786 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-17 14:31:50] CVMFS is ok
[2025-04-17 14:31:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-17 14:31:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-17 14:31:50] Further information can be found at the LHC@home message board.
[2025-04-17 14:31:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-17 14:31:50] Checking for apptainer binary...
[2025-04-17 14:31:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-17 14:31:50] Running /usr/bin/apptainer --version
[2025-04-17 14:31:50] apptainer version 1.3.2-1.el7
[2025-04-17 14:31:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-17 14:31:50] c-205-33.aglt2.org
[2025-04-17 14:31:50] apptainer works
[2025-04-17 14:31:50] Set ATHENA_PROC_NUMBER=4
[2025-04-17 14:31:50] Set ATHENA_CORE_NUMBER=4
[2025-04-17 14:31:50] Starting ATLAS job with PandaID=6605588572
[2025-04-17 14:31:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
14:49:29 (29852): wrapper (7.7.26015): starting
14:49:29 (29852): wrapper: running run_atlas (--nthreads 4)
[2025-04-17 14:49:29] Arguments: --nthreads 4
[2025-04-17 14:49:29] Threads: 4
[2025-04-17 14:49:29] This job has been restarted, cleaning up previous attempt
[2025-04-17 14:49:29] Checking for CVMFS
[2025-04-17 14:49:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-17 14:49:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-17 14:49:30] Running cvmfs_config stat atlas.cern.ch
[2025-04-17 14:49:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-17 14:49:30] 2.11.2.0 26179 381001 90548 144975 1 186 16493790 20275200 1 130560 0 18788812 99.988 6877744 64784 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-17 14:49:30] CVMFS is ok
[2025-04-17 14:49:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-17 14:49:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-17 14:49:30] Further information can be found at the LHC@home message board.
[2025-04-17 14:49:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-17 14:49:30] Checking for apptainer binary...
[2025-04-17 14:49:30] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-17 14:49:30] Running /usr/bin/apptainer --version
[2025-04-17 14:49:30] apptainer version 1.3.2-1.el7
[2025-04-17 14:49:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-17 14:49:30] c-205-33.aglt2.org
[2025-04-17 14:49:30] apptainer works
[2025-04-17 14:49:31] Set ATHENA_PROC_NUMBER=4
[2025-04-17 14:49:31] Set ATHENA_CORE_NUMBER=4
[2025-04-17 14:49:31] Starting ATLAS job with PandaID=6605588572
[2025-04-17 14:49:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-17 16:40:02]  *** The last 200 lines of the pilot log: ***
[2025-04-17 16:40:02] 2025-04-17 20:39:42,548 | INFO     | mean x: 1744919215.0
[2025-04-17 16:40:02] 2025-04-17 20:39:42,548 | INFO     | mean y: 2289884.650485437
[2025-04-17 16:40:02] 2025-04-17 20:39:42,548 | INFO     | -- intersect: -64613875980.28808
[2025-04-17 16:40:02] 2025-04-17 20:39:42,548 | INFO     | intersect: -64613875980.28808
[2025-04-17 16:40:02] 2025-04-17 20:39:42,548 | INFO     | chi2: 1.4784511272990715
[2025-04-17 16:40:02] 2025-04-17 20:39:42,548 | INFO     | current chi2=1.4784511272990715 (change=60.52628645665261 %)
[2025-04-17 16:40:02] 2025-04-17 20:39:42,548 | INFO     | sum of square deviations: 291817564.5
[2025-04-17 16:40:02] 2025-04-17 20:39:42,548 | INFO     | sum of deviations: -3549977472.000001
[2025-04-17 16:40:02] 2025-04-17 20:39:42,548 | INFO     | mean x: 1744919367.5
[2025-04-17 16:40:02] 2025-04-17 20:39:42,548 | INFO     | mean y: 2342155.93877551
[2025-04-17 16:40:02] 2025-04-17 20:39:42,548 | INFO     | -- intersect: 21229386716.107773
[2025-04-17 16:40:02] 2025-04-17 20:39:42,548 | INFO     | intersect: 21229386716.107773
[2025-04-17 16:40:02] 2025-04-17 20:39:42,549 | INFO     | chi2: 0.3536246026802871
[2025-04-17 16:40:02] 2025-04-17 20:39:42,549 | INFO     | current chi2=0.3536246026802871 (change=76.08141411300412 %)
[2025-04-17 16:40:02] 2025-04-17 20:39:42,549 | INFO     | sum of square deviations: 249388862.0
[2025-04-17 16:40:02] 2025-04-17 20:39:42,549 | INFO     | sum of deviations: -6427960155.999999
[2025-04-17 16:40:02] 2025-04-17 20:39:42,549 | INFO     | mean x: 1744919520.0
[2025-04-17 16:40:02] 2025-04-17 20:39:42,549 | INFO     | mean y: 2351816.9139784947
[2025-04-17 16:40:02] 2025-04-17 20:39:42,549 | INFO     | -- intersect: 44977388232.079315
[2025-04-17 16:40:02] 2025-04-17 20:39:42,549 | INFO     | intersect: 44977388232.079315
[2025-04-17 16:40:02] 2025-04-17 20:39:42,549 | INFO     | chi2: 0.08928360990091198
[2025-04-17 16:40:02] 2025-04-17 20:39:42,549 | INFO     | current chi2=0.08928360990091198 (change=74.75186702955916 %)
[2025-04-17 16:40:02] 2025-04-17 20:39:42,549 | INFO     | sum of square deviations: 211285822.0
[2025-04-17 16:40:02] 2025-04-17 20:39:42,549 | INFO     | sum of deviations: -3030033724.0
[2025-04-17 16:40:02] 2025-04-17 20:39:42,549 | INFO     | mean x: 1744919672.5
[2025-04-17 16:40:02] 2025-04-17 20:39:42,549 | INFO     | mean y: 2338193.3636363638
[2025-04-17 16:40:02] 2025-04-17 20:39:42,550 | INFO     | -- intersect: 25026097020.61725
[2025-04-17 16:40:02] 2025-04-17 20:39:42,550 | INFO     | intersect: 25026097020.61725
[2025-04-17 16:40:02] 2025-04-17 20:39:42,550 | INFO     | chi2: 0.05933291096616103
[2025-04-17 16:40:02] 2025-04-17 20:39:42,550 | INFO     | current chi2=0.05933291096616103 (change=33.54557344622445 %)
[2025-04-17 16:40:02] 2025-04-17 20:39:42,550 | INFO     | sum of square deviations: 177275882.0
[2025-04-17 16:40:02] 2025-04-17 20:39:42,550 | INFO     | sum of deviations: 532762531.9999999
[2025-04-17 16:40:02] 2025-04-17 20:39:42,550 | INFO     | mean x: 1744919825.0
[2025-04-17 16:40:02] 2025-04-17 20:39:42,550 | INFO     | mean y: 2322196.373493976
[2025-04-17 16:40:02] 2025-04-17 20:39:42,550 | INFO     | -- intersect: -5241639326.288662
[2025-04-17 16:40:02] 2025-04-17 20:39:42,550 | INFO     | intersect: -5241639326.288662
[2025-04-17 16:40:02] 2025-04-17 20:39:42,550 | INFO     | chi2: 0.00027891193515560867
[2025-04-17 16:40:02] 2025-04-17 20:39:42,550 | INFO     | current chi2=0.00027891193515560867 (change=99.5299203585095 %)
[2025-04-17 16:40:02] 2025-04-17 20:39:42,550 | INFO     | sum of square deviations: 147126479.5
[2025-04-17 16:40:02] 2025-04-17 20:39:42,550 | INFO     | sum of deviations: 360318216.0
[2025-04-17 16:40:02] 2025-04-17 20:39:42,551 | INFO     | mean x: 1744919977.5
[2025-04-17 16:40:02] 2025-04-17 20:39:42,551 | INFO     | mean y: 2323065.0
[2025-04-17 16:40:02] 2025-04-17 20:39:42,551 | INFO     | -- intersect: -4271050806.8702917
[2025-04-17 16:40:02] 2025-04-17 20:39:42,551 | INFO     | intersect: -4271050806.8702917
[2025-04-17 16:40:02] 2025-04-17 20:39:42,551 | INFO     | chi2: 0.00022551504226702376
[2025-04-17 16:40:02] 2025-04-17 20:39:42,551 | INFO     | current chi2=0.00022551504226702376 (change=19.144714211958725 %)
[2025-04-17 16:40:02] 2025-04-17 20:39:42,551 | INFO     | left removable region: 60
[2025-04-17 16:40:02] 2025-04-17 20:39:42,551 | INFO     | sum of square deviations: 22960430.5
[2025-04-17 16:40:02] 2025-04-17 20:39:42,551 | INFO     | sum of deviations: -29254380.0
[2025-04-17 16:40:02] 2025-04-17 20:39:42,551 | INFO     | mean x: 1744920709.5
[2025-04-17 16:40:02] 2025-04-17 20:39:42,551 | INFO     | mean y: 2325709.1904761903
[2025-04-17 16:40:02] 2025-04-17 20:39:42,551 | INFO     | -- intersect: 2225566841.60664
[2025-04-17 16:40:02] 2025-04-17 20:39:42,551 | INFO     | intersect: 2225566841.60664
[2025-04-17 16:40:02] 2025-04-17 20:39:42,551 | INFO     | chi2: 5.475732482869837e-06
[2025-04-17 16:40:02] 2025-04-17 20:39:42,551 | INFO     | -- intersect: 2225566841.60664
[2025-04-17 16:40:02] 2025-04-17 20:39:42,551 | INFO     | current memory leak: -1.27 B/s (using 42 data points, chi2=0.00)
[2025-04-17 16:40:02] 2025-04-17 20:39:42,552 | INFO     | ..............................
[2025-04-17 16:40:02] 2025-04-17 20:39:42,552 | INFO     | . Timing measurements:
[2025-04-17 16:40:02] 2025-04-17 20:39:42,552 | INFO     | . get job = 0 s
[2025-04-17 16:40:02] 2025-04-17 20:39:42,552 | INFO     | . initial setup = 0 s
[2025-04-17 16:40:02] 2025-04-17 20:39:42,552 | INFO     | . payload setup = 3 s
[2025-04-17 16:40:02] 2025-04-17 20:39:42,552 | INFO     | . stage-in = 0 s
[2025-04-17 16:40:02] 2025-04-17 20:39:42,552 | INFO     | . payload execution = 6577 s
[2025-04-17 16:40:02] 2025-04-17 20:39:42,552 | INFO     | . stage-out = 0 s
[2025-04-17 16:40:02] 2025-04-17 20:39:42,552 | INFO     | . log creation = 0 s
[2025-04-17 16:40:02] 2025-04-17 20:39:42,552 | INFO     | ..............................
[2025-04-17 16:40:02] 2025-04-17 20:39:42,588 | INFO     | 
[2025-04-17 16:40:02] 2025-04-17 20:39:42,588 | INFO     | job summary report
[2025-04-17 16:40:02] 2025-04-17 20:39:42,588 | INFO     | --------------------------------------------------
[2025-04-17 16:40:02] 2025-04-17 20:39:42,588 | INFO     | PanDA job id: 6605588572
[2025-04-17 16:40:02] 2025-04-17 20:39:42,588 | INFO     | task id: 44075483
[2025-04-17 16:40:02] 2025-04-17 20:39:42,588 | INFO     | errors: (none)
[2025-04-17 16:40:02] 2025-04-17 20:39:42,588 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-17 16:40:02] 2025-04-17 20:39:42,588 | INFO     | pilot state: finished 
[2025-04-17 16:40:02] 2025-04-17 20:39:42,588 | INFO     | transexitcode: 0
[2025-04-17 16:40:02] 2025-04-17 20:39:42,588 | INFO     | exeerrorcode: 0
[2025-04-17 16:40:02] 2025-04-17 20:39:42,588 | INFO     | exeerrordiag: 
[2025-04-17 16:40:02] 2025-04-17 20:39:42,588 | INFO     | exitcode: 0
[2025-04-17 16:40:02] 2025-04-17 20:39:42,589 | INFO     | exitmsg: OK
[2025-04-17 16:40:02] 2025-04-17 20:39:42,589 | INFO     | cpuconsumptiontime: 23101 s
[2025-04-17 16:40:02] 2025-04-17 20:39:42,589 | INFO     | nevents: 400
[2025-04-17 16:40:02] 2025-04-17 20:39:42,589 | INFO     | neventsw: 0
[2025-04-17 16:40:02] 2025-04-17 20:39:42,589 | INFO     | pid: 7870
[2025-04-17 16:40:02] 2025-04-17 20:39:42,589 | INFO     | pgrp: 7870
[2025-04-17 16:40:02] 2025-04-17 20:39:42,589 | INFO     | corecount: 4
[2025-04-17 16:40:02] 2025-04-17 20:39:42,589 | INFO     | event service: False
[2025-04-17 16:40:02] 2025-04-17 20:39:42,589 | INFO     | sizes: {0: 2426824, 3: 2427030, 11: 2427058, 6584: 2463067, 6587: 2463067, 6590: 2463237}
[2025-04-17 16:40:02] 2025-04-17 20:39:42,589 | INFO     | --------------------------------------------------
[2025-04-17 16:40:02] 2025-04-17 20:39:42,589 | INFO     | 
[2025-04-17 16:40:02] 2025-04-17 20:39:42,589 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-17 16:40:02] 2025-04-17 20:39:42,599 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-17 16:40:02] 2025-04-17 20:39:42,599 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-17 16:40:02] 2025-04-17 20:39:42,599 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-17 16:40:02] 2025-04-17 20:39:42,599 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-17 16:40:02] 2025-04-17 20:39:42,599 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-17 16:40:02] 2025-04-17 20:39:42,599 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-17 16:40:02] 2025-04-17 20:39:42,599 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-17 16:40:02] 2025-04-17 20:39:42,599 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-17 16:40:02] 2025-04-17 20:39:42,599 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-17 16:40:02] 2025-04-17 20:39:42,599 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-17 16:40:02] 2025-04-17 20:39:42,599 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-17 16:40:02] 2025-04-17 20:39:42,599 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-17 16:40:02] 2025-04-17 20:39:42,599 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-17 16:40:02] 2025-04-17 20:39:42,599 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-17 16:40:02] 2025-04-17 20:39:42,599 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-17 16:40:02] 2025-04-17 20:39:42,599 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-17 16:40:02] 2025-04-17 20:39:42,599 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-17 16:40:02] 2025-04-17 20:39:42,599 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-17 16:40:02] 2025-04-17 20:39:42,599 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-17 16:40:02] 2025-04-17 20:39:42,600 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-17 16:40:02] 2025-04-17 20:39:42,600 | INFO     | job 6605588572 has completed (purged errors)
[2025-04-17 16:40:02] 2025-04-17 20:39:42,600 | INFO     | overall cleanup function is called
[2025-04-17 16:40:02] 2025-04-17 20:39:43,090 | INFO     | PID=1472 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-04-17 16:40:02] 2025-04-17 20:39:43,606 | INFO     | --- collectZombieJob: --- 10, [7870]
[2025-04-17 16:40:02] 2025-04-17 20:39:43,606 | INFO     | zombie collector waiting for pid 7870
[2025-04-17 16:40:02] 2025-04-17 20:39:43,606 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-17 16:40:02] 2025-04-17 20:39:43,606 | INFO     | collected zombie processes
[2025-04-17 16:40:02] 2025-04-17 20:39:43,607 | INFO     | will attempt to kill all subprocesses of pid=7870
[2025-04-17 16:40:02] 2025-04-17 20:39:43,639 | INFO     | process IDs to be killed: [7870] (in reverse order)
[2025-04-17 16:40:02] 2025-04-17 20:39:43,659 | WARNING  | found no corresponding commands to process id(s)
[2025-04-17 16:40:02] 2025-04-17 20:39:43,659 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-17 16:40:02] 2025-04-17 20:39:43,660 | INFO     | did not find any defunct processes belonging to 7870
[2025-04-17 16:40:02] 2025-04-17 20:39:43,661 | INFO     | did not find any defunct processes belonging to 7870
[2025-04-17 16:40:02] 2025-04-17 20:39:43,661 | INFO     | ready for new job
[2025-04-17 16:40:02] 2025-04-17 20:39:43,661 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-17 16:40:02] 2025-04-17 20:39:43,662 | INFO     | **************************************
[2025-04-17 16:40:02] 2025-04-17 20:39:43,662 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-17 16:40:02] 2025-04-17 20:39:43,662 | INFO     | **************************************
[2025-04-17 16:40:02] 2025-04-17 20:39:43,662 | INFO     | 
[2025-04-17 16:40:02] 2025-04-17 20:39:43,662 | INFO     | architecture information:
[2025-04-17 16:40:02] 2025-04-17 20:39:43,663 | INFO     | executing command: cat /etc/os-release
[2025-04-17 16:40:02] 2025-04-17 20:39:43,669 | INFO     | cat /etc/os-release:
[2025-04-17 16:40:02] NAME="CentOS Linux"
[2025-04-17 16:40:02] VERSION="7 (Core)"
[2025-04-17 16:40:02] ID="centos"
[2025-04-17 16:40:02] ID_LIKE="rhel fedora"
[2025-04-17 16:40:02] VERSION_ID="7"
[2025-04-17 16:40:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-17 16:40:02] ANSI_COLOR="0;31"
[2025-04-17 16:40:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-17 16:40:02] HOME_URL="https://www.centos.org/"
[2025-04-17 16:40:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-17 16:40:02] 
[2025-04-17 16:40:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-17 16:40:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-17 16:40:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-17 16:40:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-17 16:40:02] 
[2025-04-17 16:40:02] 2025-04-17 20:39:43,670 | INFO     | **************************************
[2025-04-17 16:40:02] 2025-04-17 20:39:44,173 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-17 16:40:02] 2025-04-17 20:39:44,194 | INFO     | sufficient remaining disk space (18620612608 B)
[2025-04-17 16:40:02] 2025-04-17 20:39:44,194 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-17 16:40:02] 2025-04-17 20:39:44,195 | INFO     | current server update state: UPDATING_FINAL
[2025-04-17 16:40:02] 2025-04-17 20:39:44,195 | INFO     | update_server=False
[2025-04-17 16:40:02] 2025-04-17 20:39:44,195 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-17 16:40:02] 2025-04-17 20:39:44,195 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-17 16:40:02] 2025-04-17 20:39:44,196 | INFO     | aborting loop
[2025-04-17 16:40:02] 2025-04-17 20:39:44,196 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-17 16:40:02] 2025-04-17 20:39:44,222 | INFO     | all payload control threads have been joined
[2025-04-17 16:40:02] 2025-04-17 20:39:44,570 | INFO     | all job control threads have been joined
[2025-04-17 16:40:02] 2025-04-17 20:39:44,707 | INFO     | all data control threads have been joined
[2025-04-17 16:40:02] 2025-04-17 20:39:44,801 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-17 16:40:02] 2025-04-17 20:39:45,096 | INFO     | found 0 job(s) in 20 queues
[2025-04-17 16:40:02] 2025-04-17 20:39:45,096 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-17 16:40:02] 2025-04-17 20:39:45,097 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-17 16:40:02] 2025-04-17 20:39:45,197 | INFO     | [job] job monitor thread has finished
[2025-04-17 16:40:02] 2025-04-17 20:39:45,200 | INFO     | [job] queue monitor thread has finished
[2025-04-17 16:40:02] 2025-04-17 20:39:45,201 | INFO     | [job] retrieve thread has finished
[2025-04-17 16:40:02] 2025-04-17 20:39:45,228 | INFO     | [payload] control thread has finished
[2025-04-17 16:40:02] 2025-04-17 20:39:45,378 | INFO     | [payload] validate_post thread has finished
[2025-04-17 16:40:02] 2025-04-17 20:39:45,576 | INFO     | [job] control thread has finished
[2025-04-17 16:40:02] 2025-04-17 20:39:45,606 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-17 16:40:02] 2025-04-17 20:39:45,713 | INFO     | [data] control thread has finished
[2025-04-17 16:40:02] 2025-04-17 20:39:45,765 | INFO     | [payload] validate_pre thread has finished
[2025-04-17 16:40:02] 2025-04-17 20:39:45,768 | INFO     | [job] validate thread has finished
[2025-04-17 16:40:02] 2025-04-17 20:39:45,779 | INFO     | [job] create_data_payload thread has finished
[2025-04-17 16:40:02] 2025-04-17 20:39:45,801 | INFO     | [data] copytool_in thread has finished
[2025-04-17 16:40:02] 2025-04-17 20:39:46,062 | INFO     | [payload] failed_post thread has finished
[2025-04-17 16:40:02] 2025-04-17 20:39:46,341 | INFO     | [payload] execute_payloads thread has finished
[2025-04-17 16:40:02] 2025-04-17 20:39:46,807 | INFO     | [data] copytool_out thread has finished
[2025-04-17 16:40:02] 2025-04-17 20:39:49,607 | INFO     | [data] queue_monitor thread has finished
[2025-04-17 16:40:02] 2025-04-17 20:39:55,203 | INFO     | job.realtimelogging is not enabled
[2025-04-17 16:40:02] 2025-04-17 20:39:56,219 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-17 16:40:02] 2025-04-17 20:39:56,972 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140454890702656)>', '<ExcThread(monitor, started 140454448310016)>']
[2025-04-17 16:40:02] 2025-04-17 20:39:57,141 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-17 16:40:02] 2025-04-17 20:39:57,141 | INFO     | [monitor] control thread has ended
[2025-04-17 16:40:02] 2025-04-17 20:40:01,986 | INFO     | all workflow threads have been joined
[2025-04-17 16:40:02] 2025-04-17 20:40:01,986 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-17 16:40:02] 2025-04-17 20:40:01,986 | INFO     | traces error code: 0
[2025-04-17 16:40:02] 2025-04-17 20:40:01,986 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-17 16:40:02] 2025-04-17 20:40:02,048 [wrapper] ==== pilot stdout END ====
[2025-04-17 16:40:02] 2025-04-17 20:40:02,050 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-17 16:40:02] 2025-04-17 20:40:02,052 [wrapper] pilotpid: 1472
[2025-04-17 16:40:02] 2025-04-17 20:40:02,054 [wrapper] Pilot exit status: 0
[2025-04-17 16:40:02] 2025-04-17 20:40:02,060 [wrapper] pandaids: 6605588572 6605588572
[2025-04-17 16:40:02] 2025-04-17 20:40:02,075 [wrapper] cleanup supervisor_pilot 10411 1473
[2025-04-17 16:40:02] 2025-04-17 20:40:02,077 [wrapper] Test setup, not cleaning
[2025-04-17 16:40:02] 2025-04-17 20:40:02,078 [wrapper] apfmon messages muted
[2025-04-17 16:40:02] 2025-04-17 20:40:02,080 [wrapper] ==== wrapper stdout END ====
[2025-04-17 16:40:02] 2025-04-17 20:40:02,082 [wrapper] ==== wrapper stderr END ====
[2025-04-17 16:40:02]  *** Error codes and diagnostics ***
[2025-04-17 16:40:02]     "exeErrorCode": 0,
[2025-04-17 16:40:02]     "exeErrorDiag": "",
[2025-04-17 16:40:02]     "pilotErrorCode": 0,
[2025-04-17 16:40:02]     "pilotErrorDiag": "",
[2025-04-17 16:40:02]  *** Listing of results directory ***
[2025-04-17 16:40:02] total 632604
[2025-04-17 16:40:02] drwx------ 4 boincer umatlas      4096 Apr  3 04:00 pilot3
[2025-04-17 16:40:02] -rw-r--r-- 1 boincer umatlas    495897 Apr 17 11:14 pilot3.tar.gz
[2025-04-17 16:40:02] -rw-r--r-- 1 boincer umatlas      5111 Apr 17 11:20 queuedata.json
[2025-04-17 16:40:02] -rwx------ 1 boincer umatlas     37140 Apr 17 11:20 runpilot2-wrapper.sh
[2025-04-17 16:40:02] -rw-r--r-- 1 boincer umatlas       100 Apr 17 14:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-17 16:40:02] -rwxr-xr-x 1 boincer umatlas      7986 Apr 17 14:31 run_atlas
[2025-04-17 16:40:02] -rw-r--r-- 1 boincer umatlas       105 Apr 17 14:31 job.xml
[2025-04-17 16:40:02] -rw-r--r-- 3 boincer umatlas 225229944 Apr 17 14:31 EVNT.44075481._002230.pool.root.1
[2025-04-17 16:40:02] -rw-r--r-- 3 boincer umatlas 225229944 Apr 17 14:31 ATLAS.root_0
[2025-04-17 16:40:02] -rw-r--r-- 2 boincer umatlas     17569 Apr 17 14:31 start_atlas.sh
[2025-04-17 16:40:02] drwxrwx--x 2 boincer umatlas      4096 Apr 17 14:31 shared
[2025-04-17 16:40:02] -rw-r--r-- 2 boincer umatlas    508892 Apr 17 14:31 input.tar.gz
[2025-04-17 16:40:02] -rw-r--r-- 1 boincer umatlas         0 Apr 17 14:31 boinc_lockfile
[2025-04-17 16:40:02] -rw------- 1 boincer umatlas   1618536 Apr 17 14:31 agis_ddmendpoints.agis.ALL.json
[2025-04-17 16:40:02] -rw-r--r-- 1 boincer umatlas      2579 Apr 17 14:49 pandaJob.out
[2025-04-17 16:40:02] -rw------- 1 boincer umatlas       424 Apr 17 14:49 setup.sh.local
[2025-04-17 16:40:02] -rw------- 1 boincer umatlas    990274 Apr 17 14:49 agis_schedconf.cvmfs.json
[2025-04-17 16:40:02] -rw-r--r-- 1 boincer umatlas      6154 Apr 17 16:39 init_data.xml
[2025-04-17 16:40:02] -rw-r--r-- 1 boincer umatlas       529 Apr 17 16:39 boinc_task_state.xml
[2025-04-17 16:40:02] -rw------- 1 boincer umatlas 191672213 Apr 17 16:39 HITS.44075483._057352.pool.root.1
[2025-04-17 16:40:02] -rw------- 1 boincer umatlas        96 Apr 17 16:39 pilot_heartbeat.json
[2025-04-17 16:40:02] -rw-r--r-- 1 boincer umatlas      8192 Apr 17 16:39 boinc_mmap_file
[2025-04-17 16:40:02] -rw-r--r-- 1 boincer umatlas        27 Apr 17 16:39 wrapper_checkpoint.txt
[2025-04-17 16:40:02] -rw------- 1 boincer umatlas      1038 Apr 17 16:39 memory_monitor_summary.json
[2025-04-17 16:40:02] -rw------- 1 boincer umatlas    270483 Apr 17 16:39 log.44075483._057352.job.log.tgz.1
[2025-04-17 16:40:02] -rw------- 1 boincer umatlas      7728 Apr 17 16:39 heartbeat.json
[2025-04-17 16:40:02] -rw------- 1 boincer umatlas      4425 Apr 17 16:40 pilotlog.txt
[2025-04-17 16:40:02] -rw------- 1 boincer umatlas    618972 Apr 17 16:40 log.44075483._057352.job.log.1
[2025-04-17 16:40:02] -rw------- 1 boincer umatlas       357 Apr 17 16:40 output.list
[2025-04-17 16:40:02] -rw-r--r-- 1 boincer umatlas       620 Apr 17 16:40 runtime_log
[2025-04-17 16:40:02] -rw------- 1 boincer umatlas    911360 Apr 17 16:40 result.tar.gz
[2025-04-17 16:40:02] -rw-r--r-- 1 boincer umatlas     11098 Apr 17 16:40 runtime_log.err
[2025-04-17 16:40:02] -rw------- 1 boincer umatlas       781 Apr 17 16:40 dq5KDmKDgP7n9Rq4apOajLDm4fhM0noT9bVoFjIUDm863KDm03qoAo.diag
[2025-04-17 16:40:02] -rw-r--r-- 1 boincer umatlas     22943 Apr 17 16:40 stderr.txt
[2025-04-17 16:40:02] HITS file was successfully produced:
[2025-04-17 16:40:02] -rw------- 1 boincer umatlas 191672213 Apr 17 16:39 shared/HITS.pool.root.1
[2025-04-17 16:40:02]  *** Contents of shared directory: ***
[2025-04-17 16:40:02] total 408552
[2025-04-17 16:40:02] -rw-r--r-- 3 boincer umatlas 225229944 Apr 17 14:31 ATLAS.root_0
[2025-04-17 16:40:02] -rw-r--r-- 2 boincer umatlas     17569 Apr 17 14:31 start_atlas.sh
[2025-04-17 16:40:02] -rw-r--r-- 2 boincer umatlas    508892 Apr 17 14:31 input.tar.gz
[2025-04-17 16:40:02] -rw------- 1 boincer umatlas 191672213 Apr 17 16:39 HITS.pool.root.1
[2025-04-17 16:40:02] -rw------- 1 boincer umatlas    911360 Apr 17 16:40 result.tar.gz
16:40:04 (29852): run_atlas exited; CPU time 23120.764077
16:40:04 (29852): called boinc_finish(0)

</stderr_txt>
]]>

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