Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-04-18 02:10:21 (13064): Detected: vboxwrapper 26206
2025-04-18 02:10:21 (13064): Detected: BOINC client v8.0.2
2025-04-18 02:10:22 (13064): Detected: VirtualBox VboxManage Interface (Version: 7.1.6)
2025-04-18 02:10:22 (13064): Successfully copied 'init_data.xml' to the shared directory.
2025-04-18 02:10:23 (13064): Create VM. (boinc_1d0472f6ce986dbf, slot#1)
2025-04-18 02:10:23 (13064): Setting Memory Size for VM. (4800MB)
2025-04-18 02:10:23 (13064): Setting CPU Count for VM. (8)
2025-04-18 02:10:24 (13064): Setting Chipset Options for VM.
2025-04-18 02:10:24 (13064): Setting Graphics Controller Options for VM.
2025-04-18 02:10:24 (13064): Setting Boot Options for VM.
2025-04-18 02:10:24 (13064): Setting Network Configuration for NAT.
2025-04-18 02:10:25 (13064): Enabling VM Network Access.
2025-04-18 02:10:25 (13064): Disabling USB Support for VM.
2025-04-18 02:10:25 (13064): Disabling COM Port Support for VM.
2025-04-18 02:10:26 (13064): Disabling LPT Port Support for VM.
2025-04-18 02:10:26 (13064): Disabling Audio Support for VM.
2025-04-18 02:10:26 (13064): Disabling Clipboard Support for VM.
2025-04-18 02:10:26 (13064): Disabling Drag and Drop Support for VM.
2025-04-18 02:10:27 (13064): Adding storage controller(s) to VM.
2025-04-18 02:10:27 (13064): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-04-18 02:10:27 (13064): Adding VirtualBox Guest Additions to VM.
2025-04-18 02:10:28 (13064): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-04-18 02:10:28 (13064): forwarding host port 50716 to guest port 80
2025-04-18 02:10:28 (13064): Enabling remote desktop for VM.
2025-04-18 02:10:28 (13064): Required extension pack not installed, remote desktop not enabled.
2025-04-18 02:10:28 (13064): Enabling shared directory for VM.
2025-04-18 02:10:29 (13064): Starting VM using VBoxManage interface. (boinc_1d0472f6ce986dbf, slot#1)
2025-04-18 02:10:36 (13064): Successfully started VM. (PID = '9172')
2025-04-18 02:10:36 (13064): Reporting VM Process ID to BOINC.
2025-04-18 02:10:36 (13064): Guest Log: BIOS: VirtualBox 7.1.6
2025-04-18 02:10:36 (13064): Guest Log: CPUID EDX: 0x178bfbff
2025-04-18 02:10:36 (13064): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-04-18 02:10:36 (13064): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-04-18 02:10:36 (13064): VM state change detected. (old = 'poweredoff', new = 'running')
2025-04-18 02:10:36 (13064): Detected: Web Application Enabled (http://localhost:50716)
2025-04-18 02:10:36 (13064): Preference change detected
2025-04-18 02:10:36 (13064): Setting CPU throttle for VM. (40%)
2025-04-18 02:10:37 (13064): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 180 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-18 02:10:38 (13064): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-04-18 02:10:38 (13064): Guest Log: BIOS: Booting from Hard Disk...
2025-04-18 02:10:42 (13064): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-04-18 02:10:42 (13064): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-04-18 02:10:42 (13064): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-04-18 02:10:42 (13064): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-04-18 02:10:42 (13064): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-04-18 02:10:42 (13064): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-04-18 02:10:42 (13064): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-04-18 02:10:42 (13064): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-04-18 02:10:42 (13064): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-04-18 02:10:42 (13064): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-04-18 02:10:42 (13064): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-04-18 02:10:42 (13064): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-04-18 02:10:42 (13064): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-04-18 02:10:42 (13064): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-04-18 02:10:42 (13064): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-04-18 02:10:42 (13064): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-04-18 02:10:42 (13064): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-04-18 02:10:42 (13064): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-04-18 02:10:42 (13064): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-04-18 02:10:42 (13064): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-04-18 02:10:42 (13064): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-04-18 02:10:42 (13064): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-04-18 02:10:42 (13064): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-04-18 02:10:42 (13064): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-04-18 02:10:42 (13064): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-04-18 02:10:42 (13064): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-04-18 02:10:42 (13064): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-04-18 02:10:42 (13064): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-04-18 02:10:42 (13064): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-04-18 02:10:42 (13064): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-04-18 02:10:42 (13064): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-04-18 02:10:42 (13064): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-04-18 02:10:55 (13064): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-04-18 02:10:55 (13064): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-04-18 02:11:17 (13064): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-04-18 02:11:17 (13064): Guest Log: 00:00:00.000492 main     Log opened 2025-04-18T02:11:15.248787000Z
2025-04-18 02:11:17 (13064): Guest Log: 00:00:00.000912 main     OS Product: Linux
2025-04-18 02:11:17 (13064): Guest Log: 00:00:00.001010 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-04-18 02:11:17 (13064): Guest Log: 00:00:00.001132 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-04-18 02:11:17 (13064): Guest Log: 00:00:00.001243 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-04-18 02:11:17 (13064): Guest Log: 00:00:00.001342 main     Process ID: 1399
2025-04-18 02:11:17 (13064): Guest Log: 00:00:00.001343 main     Package type: LINUX_64BITS_GENERIC
2025-04-18 02:11:17 (13064): Guest Log: 00:00:00.002755 main     5.2.32 r132073 started. Verbose level = 0
2025-04-18 02:11:17 (13064): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-04-18 02:11:17 (13064): Guest Log: [INFO] Mounting shared directory
2025-04-18 02:11:17 (13064): Guest Log: [INFO] Checking for init_data.xml
2025-04-18 02:11:27 (13064): Guest Log: 00:00:10.019973 timesync vgsvcTimeSyncWorker: Radical guest time change: -32 387 824 050 000ns (GuestNow=1 744 909 887 429 091 000 ns GuestLast=1 744 942 275 253 141 000 ns fSetTimeLastLoop=true )
2025-04-18 02:11:30 (13064): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-04-18 02:11:30 (13064): Guest Log: [INFO] Detected branch: prod
2025-04-18 02:11:30 (13064): Guest Log: This is the prod version of the ATLAS job wrapper
2025-04-18 02:11:30 (13064): Guest Log: Copying input files
2025-04-18 02:11:35 (13064): Guest Log: Copied input files into RunAtlas.
2025-04-18 02:11:35 (13064): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-04-18 02:11:35 (13064): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-04-18 02:11:35 (13064): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-04-18 02:11:35 (13064): Guest Log: Further information can be found at the LHC@home message board.
2025-04-18 02:11:48 (13064): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-04-18 02:11:49 (13064): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-04-18 02:11:49 (13064): Guest Log: 2.6.3.0 1681 0 32196 144972 4 1 3117322 4096000 0 65024 0 0 n/a 0 0 http://s1ihep-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-04-18 02:11:50 (13064): Guest Log: copied the webapp to /var/www
2025-04-18 02:11:50 (13064): Guest Log: ATHENA_PROC_NUMBER=8
2025-04-18 02:11:50 (13064): Guest Log: ATHENA_CORE_NUMBER=8
2025-04-18 02:11:52 (13064): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-04-18 02:11:52 (13064): Guest Log:  *** Starting ATLAS job. (PandaID=6605318061 taskID=44075483) ***
2025-04-18 02:13:13 (13064): VM state change detected. (old = 'running', new = 'paused')
2025-04-18 02:13:34 (13064): VM state change detected. (old = 'paused', new = 'running')
2025-04-18 03:51:04 (13064): Status Report: Elapsed Time: '6000.000000'
2025-04-18 03:51:04 (13064): Status Report: CPU Time: '11481.703125'
2025-04-18 05:31:10 (13064): Status Report: Elapsed Time: '12000.000000'
2025-04-18 05:31:10 (13064): Status Report: CPU Time: '32844.343750'
2025-04-18 07:11:16 (13064): Status Report: Elapsed Time: '18000.000000'
2025-04-18 07:11:16 (13064): Status Report: CPU Time: '54212.390625'
2025-04-18 08:51:21 (13064): Status Report: Elapsed Time: '24000.000000'
2025-04-18 08:51:21 (13064): Status Report: CPU Time: '75539.421875'
2025-04-18 09:32:50 (13064): VM state change detected. (old = 'running', new = 'paused')
2025-04-18 09:33:11 (13064): VM state change detected. (old = 'paused', new = 'running')
2025-04-18 10:31:49 (13064): Status Report: Elapsed Time: '30000.000000'
2025-04-18 10:31:49 (13064): Status Report: CPU Time: '96262.937500'
2025-04-18 10:45:52 (13064): Guest Log:  *** Job finished ***
2025-04-18 10:45:52 (13064): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-18 10:45:52 (13064): Guest Log: 2025-04-18 01:45:13,518 | INFO     | [job] control thread has finished
2025-04-18 10:45:52 (13064): Guest Log: 2025-04-18 01:45:14,226 | INFO     | [job] queue monitor thread has finished
2025-04-18 10:45:52 (13064): Guest Log: 2025-04-18 01:45:14,842 | INFO     | [data] queue_monitor thread has finished
2025-04-18 10:45:52 (13064): Guest Log: 2025-04-18 01:45:15,781 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140319885072192)>', '<ExcThread(monitor, started 140319416882944)>']
2025-04-18 10:45:52 (13064): Guest Log: 2025-04-18 01:45:16,878 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-18 10:45:52 (13064): Guest Log: 2025-04-18 01:45:16,878 | INFO     | [monitor] control thread has ended
2025-04-18 10:45:52 (13064): Guest Log: 2025-04-18 01:45:20,870 | INFO     | all workflow threads have been joined
2025-04-18 10:45:52 (13064): Guest Log: 2025-04-18 01:45:20,871 | INFO     | end of generic workflow (traces error code: 0)
2025-04-18 10:45:52 (13064): Guest Log: 2025-04-18 01:45:20,871 | INFO     | traces error code: 0
2025-04-18 10:45:52 (13064): Guest Log: 2025-04-18 01:45:20,872 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-18 10:45:52 (13064): Guest Log: 2025-04-18 01:45:21,323 [wrapper] ==== pilot stdout END ====
2025-04-18 10:45:52 (13064): Guest Log: 2025-04-18 01:45:21,340 [wrapper] ==== wrapper stdout RESUME ====
2025-04-18 10:45:52 (13064): Guest Log: 2025-04-18 01:45:21,356 [wrapper] pilotpid: 6050
2025-04-18 10:45:52 (13064): Guest Log: 2025-04-18 01:45:21,372 [wrapper] Pilot exit status: 0
2025-04-18 10:45:52 (13064): Guest Log: 2025-04-18 01:45:21,786 [wrapper] pandaids: 6605318061
2025-04-18 10:45:52 (13064): Guest Log: 2025-04-18 01:45:21,954 [wrapper] cleanup supervisor_pilot 21817 6051
2025-04-18 10:45:52 (13064): Guest Log: 2025-04-18 01:45:21,974 [wrapper] Test setup, not cleaning
2025-04-18 10:45:52 (13064): Guest Log: 2025-04-18 01:45:22,037 [wrapper] apfmon messages muted
2025-04-18 10:45:52 (13064): Guest Log: 2025-04-18 01:45:22,056 [wrapper] ==== wrapper stdout END ====
2025-04-18 10:45:52 (13064): Guest Log: 2025-04-18 01:45:22,139 [wrapper] ==== wrapper stderr END ====
2025-04-18 10:45:52 (13064): Guest Log:  *** Error codes and diagnostics ***
2025-04-18 10:45:52 (13064): Guest Log:     "exeErrorCode": 0,
2025-04-18 10:45:52 (13064): Guest Log:     "exeErrorDiag": "",
2025-04-18 10:45:52 (13064): Guest Log:     "pilotErrorCode": 0,
2025-04-18 10:45:52 (13064): Guest Log:     "pilotErrorDiag": "",
2025-04-18 10:45:52 (13064): Guest Log:  *** Listing of results directory ***
2025-04-18 10:45:52 (13064): Guest Log: total 197340
2025-04-18 10:45:52 (13064): Guest Log: -rwx------. 1 atlas atlas     37140 Apr 17 13:50 runpilot2-wrapper.sh
2025-04-18 10:45:52 (13064): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Apr 17 13:50 queuedata.json
2025-04-18 10:45:52 (13064): Guest Log: -rw-r--r--. 1 atlas atlas    495897 Apr 17 13:50 pilot3.tar.gz
2025-04-18 10:45:52 (13064): Guest Log: -rwxr-xr-x. 1 atlas atlas      6127 Apr 17 17:11 init_data.xml
2025-04-18 10:45:52 (13064): Guest Log: -rwxr-xr-x. 1 atlas atlas    508881 Apr 17 17:11 input.tar.gz
2025-04-18 10:45:52 (13064): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 Apr 17 17:11 start_atlas.sh
2025-04-18 10:45:52 (13064): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr 17 17:11 EVNT.44075481._002197.pool.root.1 -> /data/./ATLAS.root_0
2025-04-18 10:45:52 (13064): Guest Log: -rw-r--r--. 1 atlas atlas      2579 Apr 17 17:11 pandaJob.out
2025-04-18 10:45:52 (13064): Guest Log: -rw-------. 1 atlas atlas       424 Apr 17 17:12 setup.sh.local
2025-04-18 10:45:52 (13064): Guest Log: -rw-------. 1 atlas atlas    990266 Apr 17 17:14 agis_schedconf.cvmfs.json
2025-04-18 10:45:52 (13064): Guest Log: drwx------. 4 atlas atlas      4096 Apr 17 17:15 pilot3
2025-04-18 10:45:52 (13064): Guest Log: -rw-------. 1 atlas atlas 194060055 Apr 18 01:42 HITS.44075483._056453.pool.root.1
2025-04-18 10:45:52 (13064): Guest Log: -rw-------. 1 atlas atlas        95 Apr 18 01:44 pilot_heartbeat.json
2025-04-18 10:45:52 (13064): Guest Log: -rw-------. 1 atlas atlas      1032 Apr 18 01:44 memory_monitor_summary.json
2025-04-18 10:45:52 (13064): Guest Log: -rw-------. 1 atlas atlas   1618536 Apr 18 01:44 agis_ddmendpoints.agis.ALL.json
2025-04-18 10:45:52 (13064): Guest Log: -rw-------. 1 atlas atlas    475364 Apr 18 01:44 log.44075483._056453.job.log.tgz.1
2025-04-18 10:45:52 (13064): Guest Log: -rw-------. 1 atlas atlas      7702 Apr 18 01:45 heartbeat.json
2025-04-18 10:45:52 (13064): Guest Log: -rw-------. 1 atlas atlas      4729 Apr 18 01:45 pilotlog.txt
2025-04-18 10:45:52 (13064): Guest Log: -rw-------. 1 atlas atlas   1635847 Apr 18 01:45 log.44075483._056453.job.log.1
2025-04-18 10:45:52 (13064): Guest Log: -rw-------. 1 atlas atlas       357 Apr 18 01:45 output.list
2025-04-18 10:45:52 (13064): Guest Log: -rw-r--r--. 1 atlas atlas       620 Apr 18 01:45 runtime_log
2025-04-18 10:45:52 (13064): Guest Log: -rw-------. 1 atlas atlas   2129920 Apr 18 01:45 result.tar.gz
2025-04-18 10:45:52 (13064): Guest Log: -rw-r--r--. 1 atlas atlas     10932 Apr 18 01:45 runtime_log.err
2025-04-18 10:45:52 (13064): Guest Log: -rw-------. 1 atlas atlas       660 Apr 18 01:45 PNWKDm4neP7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmg13KDmBpxWvm.diag
2025-04-18 10:45:52 (13064): Guest Log: Looking for outputfile HITS.44075483._056453.pool.root.1
2025-04-18 10:45:52 (13064): Guest Log: HITS file was successfully produced
2025-04-18 10:45:52 (13064): Guest Log: -rw-------. 1 atlas atlas 194060055 Apr 18 01:42 /home/atlas/RunAtlas/HITS.44075483._056453.pool.root.1
2025-04-18 10:45:56 (13064): Guest Log: Successfully finished the ATLAS job!
2025-04-18 10:45:56 (13064): Guest Log: Copying the results back to the shared directory!
2025-04-18 10:45:56 (13064): Guest Log:  *** Contents of shared directory: ***
2025-04-18 10:45:56 (13064): Guest Log: total 410120
2025-04-18 10:45:56 (13064): Guest Log: -rwxrwxrwx. 1 root root 223231556 Apr 17 17:10 ATLAS.root_0
2025-04-18 10:45:56 (13064): Guest Log: -rwxrwxrwx. 1 root root 194060055 Apr 18  2025 HITS.pool.root.1
2025-04-18 10:45:56 (13064): Guest Log: -rwxrwxrwx. 1 root root      6127 Apr 17 17:10 init_data.xml
2025-04-18 10:45:56 (13064): Guest Log: -rwxrwxrwx. 1 root root    508881 Apr 17 17:09 input.tar.gz
2025-04-18 10:45:56 (13064): Guest Log: -rwxrwxrwx. 1 root root   2129920 Apr 18  2025 result.tar.gz
2025-04-18 10:45:56 (13064): Guest Log: -rwxrwxrwx. 1 root root     17569 Apr 17 17:09 start_atlas.sh
2025-04-18 10:45:56 (13064): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-18 10:45:56 (13064): VM Completion File Detected.
2025-04-18 10:45:56 (13064): Powering off VM.
2025-04-18 10:45:57 (13064): Successfully stopped VM.
2025-04-18 10:45:57 (13064): Deregistering VM. (boinc_1d0472f6ce986dbf, slot#1)
2025-04-18 10:45:57 (13064): Removing network bandwidth throttle group from VM.
2025-04-18 10:45:57 (13064): Removing VM from VirtualBox.
10:46:03 (13064): called boinc_finish(0)

</stderr_txt>
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