Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-04-17 13:09:08 (12948): Detected: vboxwrapper 26206
2025-04-17 13:09:08 (12948): Detected: BOINC client v8.0.2
2025-04-17 13:09:10 (12948): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2025-04-17 13:09:11 (12948): Successfully copied 'init_data.xml' to the shared directory.
2025-04-17 13:09:11 (12948): Create VM. (boinc_4a8b3096b9edbc6f, slot#1)
2025-04-17 13:09:12 (12948): Setting Memory Size for VM. (4800MB)
2025-04-17 13:09:12 (12948): Setting CPU Count for VM. (8)
2025-04-17 13:09:12 (12948): Setting Chipset Options for VM.
2025-04-17 13:09:13 (12948): Setting Graphics Controller Options for VM.
2025-04-17 13:09:13 (12948): Setting Boot Options for VM.
2025-04-17 13:09:13 (12948): Setting Network Configuration for NAT.
2025-04-17 13:09:14 (12948): Enabling VM Network Access.
2025-04-17 13:09:14 (12948): Disabling USB Support for VM.
2025-04-17 13:09:14 (12948): Disabling COM Port Support for VM.
2025-04-17 13:09:14 (12948): Disabling LPT Port Support for VM.
2025-04-17 13:09:15 (12948): Disabling Audio Support for VM.
2025-04-17 13:09:15 (12948): Disabling Clipboard Support for VM.
2025-04-17 13:09:15 (12948): Disabling Drag and Drop Support for VM.
2025-04-17 13:09:16 (12948): Adding storage controller(s) to VM.
2025-04-17 13:09:16 (12948): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-04-17 13:09:19 (12948): Adding VirtualBox Guest Additions to VM.
2025-04-17 13:09:20 (12948): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-04-17 13:09:20 (12948): forwarding host port 57547 to guest port 80
2025-04-17 13:09:20 (12948): Enabling remote desktop for VM.
2025-04-17 13:09:21 (12948): Required extension pack not installed, remote desktop not enabled.
2025-04-17 13:09:21 (12948): Enabling shared directory for VM.
2025-04-17 13:09:21 (12948): Starting VM using VBoxManage interface. (boinc_4a8b3096b9edbc6f, slot#1)
2025-04-17 13:09:31 (12948): Successfully started VM. (PID = '3412')
2025-04-17 13:09:31 (12948): Reporting VM Process ID to BOINC.
2025-04-17 13:09:31 (12948): Guest Log: BIOS: VirtualBox 7.0.6
2025-04-17 13:09:31 (12948): Guest Log: CPUID EDX: 0x178bfbff
2025-04-17 13:09:31 (12948): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-04-17 13:09:31 (12948): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-04-17 13:09:31 (12948): VM state change detected. (old = 'poweredoff', new = 'running')
2025-04-17 13:09:31 (12948): Detected: Web Application Enabled (http://localhost:57547)
2025-04-17 13:09:31 (12948): Preference change detected
2025-04-17 13:09:31 (12948): Setting CPU throttle for VM. (90%)
2025-04-17 13:09:31 (12948): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-17 13:09:33 (12948): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-04-17 13:09:33 (12948): Guest Log: BIOS: Booting from Hard Disk...
2025-04-17 13:09:36 (12948): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-04-17 13:09:36 (12948): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-04-17 13:09:36 (12948): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-04-17 13:09:36 (12948): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-04-17 13:09:36 (12948): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-04-17 13:09:36 (12948): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-04-17 13:09:36 (12948): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-04-17 13:09:36 (12948): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-04-17 13:09:36 (12948): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-04-17 13:09:36 (12948): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-04-17 13:09:36 (12948): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-04-17 13:09:36 (12948): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-04-17 13:09:36 (12948): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-04-17 13:09:36 (12948): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-04-17 13:09:36 (12948): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-04-17 13:09:36 (12948): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-04-17 13:09:36 (12948): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-04-17 13:09:36 (12948): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-04-17 13:09:36 (12948): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-04-17 13:09:36 (12948): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-04-17 13:09:36 (12948): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-04-17 13:09:36 (12948): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-04-17 13:09:36 (12948): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-04-17 13:09:36 (12948): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-04-17 13:09:36 (12948): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-04-17 13:09:36 (12948): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-04-17 13:09:36 (12948): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-04-17 13:09:36 (12948): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-04-17 13:09:36 (12948): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-04-17 13:09:36 (12948): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-04-17 13:09:36 (12948): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-04-17 13:09:36 (12948): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-04-17 13:09:45 (12948): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-04-17 13:09:45 (12948): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-04-17 13:09:56 (12948): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-04-17 13:09:56 (12948): Guest Log: 00:00:00.000204 main     Log opened 2025-04-17T13:09:55.517862000Z
2025-04-17 13:09:56 (12948): Guest Log: 00:00:00.000382 main     OS Product: Linux
2025-04-17 13:09:56 (12948): Guest Log: 00:00:00.000422 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-04-17 13:09:56 (12948): Guest Log: 00:00:00.000491 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-04-17 13:09:56 (12948): Guest Log: 00:00:00.000529 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-04-17 13:09:56 (12948): Guest Log: 00:00:00.000530 main     Process ID: 1369
2025-04-17 13:09:56 (12948): Guest Log: 00:00:00.000530 main     Package type: LINUX_64BITS_GENERIC
2025-04-17 13:09:56 (12948): Guest Log: 00:00:00.001449 main     5.2.32 r132073 started. Verbose level = 0
2025-04-17 13:09:57 (12948): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-04-17 13:09:57 (12948): Guest Log: [INFO] Mounting shared directory
2025-04-17 13:09:57 (12948): Guest Log: [INFO] Checking for init_data.xml
2025-04-17 13:10:03 (12948): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-04-17 13:10:03 (12948): Guest Log: [INFO] Detected branch: prod
2025-04-17 13:10:03 (12948): Guest Log: This is the prod version of the ATLAS job wrapper
2025-04-17 13:10:03 (12948): Guest Log: Copying input files
2025-04-17 13:10:05 (12948): Guest Log: Copied input files into RunAtlas.
2025-04-17 13:10:05 (12948): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-04-17 13:10:05 (12948): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-04-17 13:10:05 (12948): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-04-17 13:10:05 (12948): Guest Log: Further information can be found at the LHC@home message board.
2025-04-17 13:10:06 (12948): Guest Log: 00:00:10.023671 timesync vgsvcTimeSyncWorker: Radical guest time change: 14 411 027 054 000ns (GuestNow=1 744 909 806 548 670 000 ns GuestLast=1 744 895 395 521 616 000 ns fSetTimeLastLoop=true )
2025-04-17 13:10:13 (12948): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-04-17 13:10:13 (12948): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-04-17 13:10:13 (12948): Guest Log: 2.6.3.0 1669 0 32172 144972 4 1 3117322 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-04-17 13:10:13 (12948): Guest Log: copied the webapp to /var/www
2025-04-17 13:10:13 (12948): Guest Log: ATHENA_PROC_NUMBER=8
2025-04-17 13:10:13 (12948): Guest Log: ATHENA_CORE_NUMBER=8
2025-04-17 13:10:14 (12948): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-04-17 13:10:14 (12948): Guest Log:  *** Starting ATLAS job. (PandaID=6605318049 taskID=44075483) ***
2025-04-17 13:15:00 (12948): Guest Log:  *** Job finished ***
2025-04-17 13:15:00 (12948): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-17 13:15:00 (12948): Guest Log: 2025-04-17 17:14:50,103 | INFO     | [payload] control thread has finished
2025-04-17 13:15:00 (12948): Guest Log: 2025-04-17 17:14:50,104 | INFO     | [payload] failed_post thread has finished
2025-04-17 13:15:00 (12948): Guest Log: 2025-04-17 17:14:52,670 | INFO     | [data] queue_monitor thread has finished
2025-04-17 13:15:00 (12948): Guest Log: 2025-04-17 17:14:54,014 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139819813713728)>', '<ExcThread(monitor, started 139819229374208)>']
2025-04-17 13:15:00 (12948): Guest Log: 2025-04-17 17:14:54,657 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-17 13:15:00 (12948): Guest Log: 2025-04-17 17:14:54,658 | INFO     | [monitor] control thread has ended
2025-04-17 13:15:00 (12948): Guest Log: 2025-04-17 17:14:59,021 | INFO     | all workflow threads have been joined
2025-04-17 13:15:00 (12948): Guest Log: 2025-04-17 17:14:59,022 | INFO     | end of generic workflow (traces error code: 0)
2025-04-17 13:15:00 (12948): Guest Log: 2025-04-17 17:14:59,022 | INFO     | traces error code: 0
2025-04-17 13:15:00 (12948): Guest Log: 2025-04-17 17:14:59,022 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-17 13:15:00 (12948): Guest Log: 2025-04-17 17:14:59,080 [wrapper] ==== pilot stdout END ====
2025-04-17 13:15:00 (12948): Guest Log: 2025-04-17 17:14:59,085 [wrapper] ==== wrapper stdout RESUME ====
2025-04-17 13:15:00 (12948): Guest Log: 2025-04-17 17:14:59,090 [wrapper] pilotpid: 6014
2025-04-17 13:15:00 (12948): Guest Log: 2025-04-17 17:14:59,094 [wrapper] Pilot exit status: 0
2025-04-17 13:15:00 (12948): Guest Log: 2025-04-17 17:14:59,186 [wrapper] pandaids: 6605318049
2025-04-17 13:15:00 (12948): Guest Log: 2025-04-17 17:14:59,219 [wrapper] cleanup supervisor_pilot  6020 6015
2025-04-17 13:15:00 (12948): Guest Log: 2025-04-17 17:14:59,226 [wrapper] Test setup, not cleaning
2025-04-17 13:15:00 (12948): Guest Log: 2025-04-17 17:14:59,232 [wrapper] apfmon messages muted
2025-04-17 13:15:00 (12948): Guest Log: 2025-04-17 17:14:59,237 [wrapper] ==== wrapper stdout END ====
2025-04-17 13:15:00 (12948): Guest Log: 2025-04-17 17:14:59,243 [wrapper] ==== wrapper stderr END ====
2025-04-17 13:15:00 (12948): Guest Log:  *** Error codes and diagnostics ***
2025-04-17 13:15:00 (12948): Guest Log:     "exeErrorCode": 65,
2025-04-17 13:15:00 (12948): Guest Log:     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
2025-04-17 13:15:00 (12948): Guest Log:     "pilotErrorCode": 1305,
2025-04-17 13:15:00 (12948): Guest Log:     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
2025-04-17 13:15:00 (12948): Guest Log:  *** Listing of results directory ***
2025-04-17 13:15:00 (12948): Guest Log: total 3892
2025-04-17 13:15:00 (12948): Guest Log: -rw-r--r--. 1 atlas atlas  495897 Apr 17 13:20 pilot3.tar.gz
2025-04-17 13:15:00 (12948): Guest Log: -rwx------. 1 atlas atlas   37140 Apr 17 13:48 runpilot2-wrapper.sh
2025-04-17 13:15:00 (12948): Guest Log: -rw-r--r--. 1 atlas atlas    5111 Apr 17 13:48 queuedata.json
2025-04-17 13:15:00 (12948): Guest Log: -rwxr-xr-x. 1 atlas atlas    9260 Apr 17 17:10 init_data.xml
2025-04-17 13:15:00 (12948): Guest Log: -rwxr-xr-x. 1 atlas atlas  508885 Apr 17 17:10 input.tar.gz
2025-04-17 13:15:00 (12948): Guest Log: -rwxr-xr-x. 1 atlas atlas   17569 Apr 17 17:10 start_atlas.sh
2025-04-17 13:15:00 (12948): Guest Log: lrwxrwxrwx. 1 atlas atlas      20 Apr 17 17:10 EVNT.44075481._002197.pool.root.1 -> /data/./ATLAS.root_0
2025-04-17 13:15:00 (12948): Guest Log: -rw-r--r--. 1 atlas atlas    2578 Apr 17 17:10 pandaJob.out
2025-04-17 13:15:00 (12948): Guest Log: -rw-------. 1 atlas atlas     424 Apr 17 17:10 setup.sh.local
2025-04-17 13:15:00 (12948): Guest Log: -rw-------. 1 atlas atlas  990266 Apr 17 17:11 agis_schedconf.cvmfs.json
2025-04-17 13:15:00 (12948): Guest Log: -rw-------. 1 atlas atlas 1618536 Apr 17 17:11 agis_ddmendpoints.agis.ALL.json
2025-04-17 13:15:00 (12948): Guest Log: drwx------. 4 atlas atlas    4096 Apr 17 17:11 pilot3
2025-04-17 13:15:00 (12948): Guest Log: -rw-------. 1 atlas atlas     953 Apr 17 17:12 memory_monitor_summary.json
2025-04-17 13:15:00 (12948): Guest Log: -rw-------. 1 atlas atlas   20197 Apr 17 17:12 log.44075483._056441.job.log.tgz.1
2025-04-17 13:15:00 (12948): Guest Log: -rw-------. 1 atlas atlas      95 Apr 17 17:14 pilot_heartbeat.json
2025-04-17 13:15:00 (12948): Guest Log: -rw-------. 1 atlas atlas    8357 Apr 17 17:14 heartbeat.json
2025-04-17 13:15:00 (12948): Guest Log: -rw-------. 1 atlas atlas    4722 Apr 17 17:14 pilotlog.txt
2025-04-17 13:15:00 (12948): Guest Log: -rw-------. 1 atlas atlas   76569 Apr 17 17:14 log.44075483._056441.job.log.1
2025-04-17 13:15:00 (12948): Guest Log: -rw-------. 1 atlas atlas     188 Apr 17 17:14 output.list
2025-04-17 13:15:00 (12948): Guest Log: -rw-r--r--. 1 atlas atlas     620 Apr 17 17:14 runtime_log
2025-04-17 13:15:00 (12948): Guest Log: -rw-------. 1 atlas atlas  112640 Apr 17 17:14 result.tar.gz
2025-04-17 13:15:00 (12948): Guest Log: -rw-------. 1 atlas atlas     655 Apr 17 17:14 vg9LDm5meP7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmn3cLDmGhb0Qm.diag
2025-04-17 13:15:00 (12948): Guest Log: -rw-r--r--. 1 atlas atlas   10827 Apr 17 17:14 runtime_log.err
2025-04-17 13:15:00 (12948): Guest Log: Looking for outputfile HITS.44075483._056441.pool.root.1
2025-04-17 13:15:00 (12948): Guest Log: No HITS file was produced
2025-04-17 13:15:00 (12948): Guest Log: Successfully finished the ATLAS job!
2025-04-17 13:15:00 (12948): Guest Log: Copying the results back to the shared directory!
2025-04-17 13:15:00 (12948): Guest Log:  *** Contents of shared directory: ***
2025-04-17 13:15:00 (12948): Guest Log: total 218644
2025-04-17 13:15:00 (12948): Guest Log: -rwxrwxrwx. 1 root root 223231556 Apr 17 17:09 ATLAS.root_0
2025-04-17 13:15:00 (12948): Guest Log: -rwxrwxrwx. 1 root root      9260 Apr 17 17:09 init_data.xml
2025-04-17 13:15:00 (12948): Guest Log: -rwxrwxrwx. 1 root root    508885 Apr 17 17:08 input.tar.gz
2025-04-17 13:15:00 (12948): Guest Log: -rwxrwxrwx. 1 root root    112640 Apr 17 17:15 result.tar.gz
2025-04-17 13:15:00 (12948): Guest Log: -rwxrwxrwx. 1 root root     17569 Apr 17 17:08 start_atlas.sh
2025-04-17 13:15:00 (12948): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-17 13:15:00 (12948): VM Completion File Detected.
2025-04-17 13:15:00 (12948): Powering off VM.
2025-04-17 13:15:01 (12948): Successfully stopped VM.
2025-04-17 13:15:01 (12948): Deregistering VM. (boinc_4a8b3096b9edbc6f, slot#1)
2025-04-17 13:15:01 (12948): Removing network bandwidth throttle group from VM.
2025-04-17 13:15:02 (12948): Removing VM from VirtualBox.
13:15:07 (12948): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN