Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-04-18 10:46:26 (4368): Detected: vboxwrapper 26206
2025-04-18 10:46:26 (4368): Detected: BOINC client v8.0.2
2025-04-18 10:46:26 (4368): Detected: VirtualBox VboxManage Interface (Version: 7.1.6)
2025-04-18 10:46:27 (4368): Successfully copied 'init_data.xml' to the shared directory.
2025-04-18 10:46:27 (4368): Create VM. (boinc_3df5b44dac7d453d, slot#1)
2025-04-18 10:46:28 (4368): Setting Memory Size for VM. (4800MB)
2025-04-18 10:46:28 (4368): Setting CPU Count for VM. (8)
2025-04-18 10:46:28 (4368): Setting Chipset Options for VM.
2025-04-18 10:46:28 (4368): Setting Graphics Controller Options for VM.
2025-04-18 10:46:29 (4368): Setting Boot Options for VM.
2025-04-18 10:46:29 (4368): Setting Network Configuration for NAT.
2025-04-18 10:46:29 (4368): Enabling VM Network Access.
2025-04-18 10:46:29 (4368): Disabling USB Support for VM.
2025-04-18 10:46:30 (4368): Disabling COM Port Support for VM.
2025-04-18 10:46:30 (4368): Disabling LPT Port Support for VM.
2025-04-18 10:46:30 (4368): Disabling Audio Support for VM.
2025-04-18 10:46:30 (4368): Disabling Clipboard Support for VM.
2025-04-18 10:46:31 (4368): Disabling Drag and Drop Support for VM.
2025-04-18 10:46:31 (4368): Adding storage controller(s) to VM.
2025-04-18 10:46:31 (4368): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-04-18 10:46:32 (4368): Adding VirtualBox Guest Additions to VM.
2025-04-18 10:46:32 (4368): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-04-18 10:46:32 (4368): forwarding host port 57874 to guest port 80
2025-04-18 10:46:33 (4368): Enabling remote desktop for VM.
2025-04-18 10:46:33 (4368): Required extension pack not installed, remote desktop not enabled.
2025-04-18 10:46:33 (4368): Enabling shared directory for VM.
2025-04-18 10:46:33 (4368): Starting VM using VBoxManage interface. (boinc_3df5b44dac7d453d, slot#1)
2025-04-18 10:46:41 (4368): Successfully started VM. (PID = '1512')
2025-04-18 10:46:41 (4368): Reporting VM Process ID to BOINC.
2025-04-18 10:46:41 (4368): Guest Log: BIOS: VirtualBox 7.1.6
2025-04-18 10:46:41 (4368): Guest Log: CPUID EDX: 0x178bfbff
2025-04-18 10:46:41 (4368): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-04-18 10:46:41 (4368): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-04-18 10:46:41 (4368): VM state change detected. (old = 'poweredoff', new = 'running')
2025-04-18 10:46:41 (4368): Detected: Web Application Enabled (http://localhost:57874)
2025-04-18 10:46:41 (4368): Preference change detected
2025-04-18 10:46:41 (4368): Setting CPU throttle for VM. (40%)
2025-04-18 10:46:41 (4368): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 180 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-18 10:46:43 (4368): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-04-18 10:46:43 (4368): Guest Log: BIOS: Booting from Hard Disk...
2025-04-18 10:46:48 (4368): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-04-18 10:46:48 (4368): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-04-18 10:46:48 (4368): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-04-18 10:46:48 (4368): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-04-18 10:46:48 (4368): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-04-18 10:46:48 (4368): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-04-18 10:46:48 (4368): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-04-18 10:46:48 (4368): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-04-18 10:46:48 (4368): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-04-18 10:46:48 (4368): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-04-18 10:46:48 (4368): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-04-18 10:46:48 (4368): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-04-18 10:46:48 (4368): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-04-18 10:46:48 (4368): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-04-18 10:46:48 (4368): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-04-18 10:46:48 (4368): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-04-18 10:46:48 (4368): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-04-18 10:46:48 (4368): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-04-18 10:46:48 (4368): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-04-18 10:46:48 (4368): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-04-18 10:46:48 (4368): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-04-18 10:46:48 (4368): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-04-18 10:46:48 (4368): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-04-18 10:46:48 (4368): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-04-18 10:46:48 (4368): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-04-18 10:46:48 (4368): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-04-18 10:46:48 (4368): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-04-18 10:46:48 (4368): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-04-18 10:46:48 (4368): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-04-18 10:46:48 (4368): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-04-18 10:46:48 (4368): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-04-18 10:46:48 (4368): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-04-18 10:47:02 (4368): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-04-18 10:47:02 (4368): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-04-18 10:47:20 (4368): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-04-18 10:47:20 (4368): Guest Log: 00:00:00.000276 main     Log opened 2025-04-18T10:47:19.221869000Z
2025-04-18 10:47:20 (4368): Guest Log: 00:00:00.000489 main     OS Product: Linux
2025-04-18 10:47:20 (4368): Guest Log: 00:00:00.000594 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-04-18 10:47:20 (4368): Guest Log: 00:00:00.000654 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-04-18 10:47:20 (4368): Guest Log: 00:00:00.000730 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-04-18 10:47:20 (4368): Guest Log: 00:00:00.000731 main     Process ID: 1374
2025-04-18 10:47:20 (4368): Guest Log: 00:00:00.000732 main     Package type: LINUX_64BITS_GENERIC
2025-04-18 10:47:20 (4368): Guest Log: 00:00:00.001783 main     5.2.32 r132073 started. Verbose level = 0
2025-04-18 10:47:20 (4368): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-04-18 10:47:20 (4368): Guest Log: [INFO] Mounting shared directory
2025-04-18 10:47:21 (4368): Guest Log: [INFO] Checking for init_data.xml
2025-04-18 10:47:30 (4368): Guest Log: 00:00:10.022575 timesync vgsvcTimeSyncWorker: Radical guest time change: -32 389 014 775 000ns (GuestNow=1 744 940 850 210 644 000 ns GuestLast=1 744 973 239 225 419 000 ns fSetTimeLastLoop=true )
2025-04-18 10:47:33 (4368): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-04-18 10:47:33 (4368): Guest Log: [INFO] Detected branch: prod
2025-04-18 10:47:33 (4368): Guest Log: This is the prod version of the ATLAS job wrapper
2025-04-18 10:47:33 (4368): Guest Log: Copying input files
2025-04-18 10:47:37 (4368): Guest Log: Copied input files into RunAtlas.
2025-04-18 10:47:37 (4368): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-04-18 10:47:37 (4368): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-04-18 10:47:37 (4368): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-04-18 10:47:37 (4368): Guest Log: Further information can be found at the LHC@home message board.
2025-04-18 10:47:53 (4368): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-04-18 10:47:54 (4368): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-04-18 10:47:54 (4368): Guest Log: 2.6.3.0 1655 0 32048 144984 4 1 3117322 4096000 0 65024 0 0 n/a 0 0 http://s1ihep-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-04-18 10:47:55 (4368): Guest Log: copied the webapp to /var/www
2025-04-18 10:47:55 (4368): Guest Log: ATHENA_PROC_NUMBER=8
2025-04-18 10:47:55 (4368): Guest Log: ATHENA_CORE_NUMBER=8
2025-04-18 10:47:55 (4368): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-04-18 10:47:55 (4368): Guest Log:  *** Starting ATLAS job. (PandaID=6605317305 taskID=44075483) ***
2025-04-18 12:03:05 (4368): VM state change detected. (old = 'running', new = 'paused')
2025-04-18 12:03:26 (4368): VM state change detected. (old = 'paused', new = 'running')
2025-04-18 12:27:09 (4368): Status Report: Elapsed Time: '6000.000000'
2025-04-18 12:27:09 (4368): Status Report: CPU Time: '12950.281250'
2025-04-18 13:08:52 (4368): VM state change detected. (old = 'running', new = 'paused')
2025-04-18 13:09:12 (4368): VM state change detected. (old = 'paused', new = 'running')
2025-04-18 14:07:36 (4368): Status Report: Elapsed Time: '12000.000000'
2025-04-18 14:07:36 (4368): Status Report: CPU Time: '34374.484375'
2025-04-18 15:47:42 (4368): Status Report: Elapsed Time: '18000.000000'
2025-04-18 15:47:42 (4368): Status Report: CPU Time: '55841.609375'
2025-04-18 17:27:48 (4368): Status Report: Elapsed Time: '24000.000000'
2025-04-18 17:27:48 (4368): Status Report: CPU Time: '77281.812500'
2025-04-18 19:07:54 (4368): Status Report: Elapsed Time: '30000.000000'
2025-04-18 19:07:54 (4368): Status Report: CPU Time: '98553.859375'
2025-04-18 19:21:00 (4368): Guest Log:  *** Job finished ***
2025-04-18 19:21:00 (4368): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-18 19:21:00 (4368): Guest Log: 2025-04-18 10:20:18,702 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
2025-04-18 19:21:00 (4368): Guest Log: 2025-04-18 10:20:19,705 | INFO     | [job] queue monitor thread has finished
2025-04-18 19:21:00 (4368): Guest Log: 2025-04-18 10:20:21,510 | INFO     | [data] queue_monitor thread has finished
2025-04-18 19:21:00 (4368): Guest Log: 2025-04-18 10:20:22,796 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140041936623424)>', '<ExcThread(monitor, started 140041342928640)>']
2025-04-18 19:21:00 (4368): Guest Log: 2025-04-18 10:20:23,554 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-18 19:21:00 (4368): Guest Log: 2025-04-18 10:20:23,554 | INFO     | [monitor] control thread has ended
2025-04-18 19:21:00 (4368): Guest Log: 2025-04-18 10:20:27,802 | INFO     | all workflow threads have been joined
2025-04-18 19:21:00 (4368): Guest Log: 2025-04-18 10:20:27,803 | INFO     | end of generic workflow (traces error code: 0)
2025-04-18 19:21:00 (4368): Guest Log: 2025-04-18 10:20:27,803 | INFO     | traces error code: 0
2025-04-18 19:21:00 (4368): Guest Log: 2025-04-18 10:20:27,804 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-18 19:21:00 (4368): Guest Log: 2025-04-18 10:20:28,058 [wrapper] ==== pilot stdout END ====
2025-04-18 19:21:00 (4368): Guest Log: 2025-04-18 10:20:28,067 [wrapper] ==== wrapper stdout RESUME ====
2025-04-18 19:21:00 (4368): Guest Log: 2025-04-18 10:20:28,074 [wrapper] pilotpid: 6032
2025-04-18 19:21:00 (4368): Guest Log: 2025-04-18 10:20:28,082 [wrapper] Pilot exit status: 0
2025-04-18 19:21:00 (4368): Guest Log: 2025-04-18 10:20:28,403 [wrapper] pandaids: 6605317305
2025-04-18 19:21:00 (4368): Guest Log: 2025-04-18 10:20:28,523 [wrapper] cleanup supervisor_pilot 21824 6033
2025-04-18 19:21:00 (4368): Guest Log: 2025-04-18 10:20:28,535 [wrapper] Test setup, not cleaning
2025-04-18 19:21:00 (4368): Guest Log: 2025-04-18 10:20:28,547 [wrapper] apfmon messages muted
2025-04-18 19:21:00 (4368): Guest Log: 2025-04-18 10:20:28,555 [wrapper] ==== wrapper stdout END ====
2025-04-18 19:21:00 (4368): Guest Log: 2025-04-18 10:20:28,562 [wrapper] ==== wrapper stderr END ====
2025-04-18 19:21:00 (4368): Guest Log:  *** Error codes and diagnostics ***
2025-04-18 19:21:00 (4368): Guest Log:     "exeErrorCode": 0,
2025-04-18 19:21:00 (4368): Guest Log:     "exeErrorDiag": "",
2025-04-18 19:21:00 (4368): Guest Log:     "pilotErrorCode": 0,
2025-04-18 19:21:00 (4368): Guest Log:     "pilotErrorDiag": "",
2025-04-18 19:21:00 (4368): Guest Log:  *** Listing of results directory ***
2025-04-18 19:21:00 (4368): Guest Log: total 201088
2025-04-18 19:21:00 (4368): Guest Log: -rw-r--r--. 1 atlas atlas    495897 Apr 17 13:20 pilot3.tar.gz
2025-04-18 19:21:00 (4368): Guest Log: -rwx------. 1 atlas atlas     37140 Apr 17 13:31 runpilot2-wrapper.sh
2025-04-18 19:21:00 (4368): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Apr 17 13:31 queuedata.json
2025-04-18 19:21:00 (4368): Guest Log: -rwxr-xr-x. 1 atlas atlas      6127 Apr 18 01:47 init_data.xml
2025-04-18 19:21:00 (4368): Guest Log: -rwxr-xr-x. 1 atlas atlas    508888 Apr 18 01:47 input.tar.gz
2025-04-18 19:21:00 (4368): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 Apr 18 01:47 start_atlas.sh
2025-04-18 19:21:00 (4368): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr 18 01:47 EVNT.44075481._002191.pool.root.1 -> /data/./ATLAS.root_0
2025-04-18 19:21:00 (4368): Guest Log: -rw-r--r--. 1 atlas atlas      2577 Apr 18 01:47 pandaJob.out
2025-04-18 19:21:00 (4368): Guest Log: -rw-------. 1 atlas atlas       424 Apr 18 01:48 setup.sh.local
2025-04-18 19:21:00 (4368): Guest Log: -rw-------. 1 atlas atlas    990250 Apr 18 01:50 agis_schedconf.cvmfs.json
2025-04-18 19:21:00 (4368): Guest Log: drwx------. 4 atlas atlas      4096 Apr 18 01:50 pilot3
2025-04-18 19:21:00 (4368): Guest Log: -rw-------. 1 atlas atlas 197814112 Apr 18 10:18 HITS.44075483._056283.pool.root.1
2025-04-18 19:21:00 (4368): Guest Log: -rw-------. 1 atlas atlas      1033 Apr 18 10:19 memory_monitor_summary.json
2025-04-18 19:21:00 (4368): Guest Log: -rw-------. 1 atlas atlas   1618536 Apr 18 10:19 agis_ddmendpoints.agis.ALL.json
2025-04-18 19:21:00 (4368): Guest Log: -rw-------. 1 atlas atlas    453030 Apr 18 10:19 log.44075483._056283.job.log.tgz.1
2025-04-18 19:21:00 (4368): Guest Log: -rw-------. 1 atlas atlas        95 Apr 18 10:19 pilot_heartbeat.json
2025-04-18 19:21:00 (4368): Guest Log: -rw-------. 1 atlas atlas      7697 Apr 18 10:20 heartbeat.json
2025-04-18 19:21:00 (4368): Guest Log: -rw-------. 1 atlas atlas      4413 Apr 18 10:20 pilotlog.txt
2025-04-18 19:21:00 (4368): Guest Log: -rw-------. 1 atlas atlas   1700320 Apr 18 10:20 log.44075483._056283.job.log.1
2025-04-18 19:21:00 (4368): Guest Log: -rw-------. 1 atlas atlas       357 Apr 18 10:20 output.list
2025-04-18 19:21:00 (4368): Guest Log: -rw-r--r--. 1 atlas atlas       620 Apr 18 10:20 runtime_log
2025-04-18 19:21:00 (4368): Guest Log: -rw-------. 1 atlas atlas   2170880 Apr 18 10:20 result.tar.gz
2025-04-18 19:21:00 (4368): Guest Log: -rw-------. 1 atlas atlas       660 Apr 18 10:20 tQsNDm5VeP7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmn03KDmbJ77Bo.diag
2025-04-18 19:21:00 (4368): Guest Log: -rw-r--r--. 1 atlas atlas     10932 Apr 18 10:20 runtime_log.err
2025-04-18 19:21:00 (4368): Guest Log: Looking for outputfile HITS.44075483._056283.pool.root.1
2025-04-18 19:21:01 (4368): Guest Log: HITS file was successfully produced
2025-04-18 19:21:01 (4368): Guest Log: -rw-------. 1 atlas atlas 197814112 Apr 18 10:18 /home/atlas/RunAtlas/HITS.44075483._056283.pool.root.1
2025-04-18 19:21:04 (4368): Guest Log: Successfully finished the ATLAS job!
2025-04-18 19:21:04 (4368): Guest Log: Copying the results back to the shared directory!
2025-04-18 19:21:04 (4368): Guest Log:  *** Contents of shared directory: ***
2025-04-18 19:21:04 (4368): Guest Log: total 417184
2025-04-18 19:21:04 (4368): Guest Log: -rwxrwxrwx. 1 root root 226668532 Apr 18 01:46 ATLAS.root_0
2025-04-18 19:21:04 (4368): Guest Log: -rwxrwxrwx. 1 root root 197814112 Apr 18  2025 HITS.pool.root.1
2025-04-18 19:21:04 (4368): Guest Log: -rwxrwxrwx. 1 root root      6127 Apr 18 01:46 init_data.xml
2025-04-18 19:21:04 (4368): Guest Log: -rwxrwxrwx. 1 root root    508888 Apr 17 17:10 input.tar.gz
2025-04-18 19:21:04 (4368): Guest Log: -rwxrwxrwx. 1 root root   2170880 Apr 18  2025 result.tar.gz
2025-04-18 19:21:04 (4368): Guest Log: -rwxrwxrwx. 1 root root     17569 Apr 17 17:10 start_atlas.sh
2025-04-18 19:21:04 (4368): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-18 19:21:04 (4368): VM Completion File Detected.
2025-04-18 19:21:04 (4368): Powering off VM.
2025-04-18 19:21:05 (4368): Successfully stopped VM.
2025-04-18 19:21:05 (4368): Deregistering VM. (boinc_3df5b44dac7d453d, slot#1)
2025-04-18 19:21:05 (4368): Removing network bandwidth throttle group from VM.
2025-04-18 19:21:05 (4368): Removing VM from VirtualBox.
19:21:10 (4368): called boinc_finish(0)

</stderr_txt>
]]>

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