Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
12:39:14 (15182): wrapper (7.7.26015): starting
12:39:14 (15182): wrapper: running run_atlas (--nthreads 10)
[2025-04-17 12:39:14] Arguments: --nthreads 10
[2025-04-17 12:39:14] Threads: 10
[2025-04-17 12:39:14] Checking for CVMFS
[2025-04-17 12:39:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-17 12:39:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-17 12:39:15] Running cvmfs_config stat atlas.cern.ch
[2025-04-17 12:39:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-17 12:39:17] 2.11.2.0 30332 39670 141144 144972 0 308 12396080 18430966 16663 130560 0 112814575 98.434 391231642 37189 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-17 12:39:17] CVMFS is ok
[2025-04-17 12:39:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-17 12:39:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-17 12:39:17] Further information can be found at the LHC@home message board.
[2025-04-17 12:39:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-17 12:39:17] Checking for apptainer binary...
[2025-04-17 12:39:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-17 12:39:17] Running /usr/bin/apptainer --version
[2025-04-17 12:39:18] apptainer version 1.3.2-1.el7
[2025-04-17 12:39:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-17 12:39:46] c-210-14.aglt2.org
[2025-04-17 12:39:46] apptainer works
[2025-04-17 12:39:46] Set ATHENA_PROC_NUMBER=10
[2025-04-17 12:39:46] Set ATHENA_CORE_NUMBER=10
[2025-04-17 12:39:46] Starting ATLAS job with PandaID=6605317232
[2025-04-17 12:39:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
14:09:58 (15652): wrapper (7.7.26015): starting
14:09:58 (15652): wrapper: running run_atlas (--nthreads 10)
[2025-04-17 14:09:58] Arguments: --nthreads 10
[2025-04-17 14:09:58] Threads: 10
[2025-04-17 14:09:58] This job has been restarted, cleaning up previous attempt
[2025-04-17 14:09:58] Checking for CVMFS
[2025-04-17 14:09:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-17 14:09:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-17 14:09:59] Running cvmfs_config stat atlas.cern.ch
[2025-04-17 14:09:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-17 14:09:59] 2.11.2.0 30332 39761 166284 144974 2 307 15904585 18432001 14930 130560 0 113334396 98.431 392497956 37195 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-17 14:09:59] CVMFS is ok
[2025-04-17 14:09:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-17 14:09:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-17 14:09:59] Further information can be found at the LHC@home message board.
[2025-04-17 14:09:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-17 14:09:59] Checking for apptainer binary...
[2025-04-17 14:09:59] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-17 14:09:59] Running /usr/bin/apptainer --version
[2025-04-17 14:09:59] apptainer version 1.3.2-1.el7
[2025-04-17 14:09:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-17 14:10:07] c-210-14.aglt2.org
[2025-04-17 14:10:07] apptainer works
[2025-04-17 14:10:07] Set ATHENA_PROC_NUMBER=10
[2025-04-17 14:10:07] Set ATHENA_CORE_NUMBER=10
[2025-04-17 14:10:07] Starting ATLAS job with PandaID=6605317232
[2025-04-17 14:10:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-18 03:10:09]  *** The last 200 lines of the pilot log: ***
[2025-04-18 03:10:09] 2025-04-18 07:09:48,300 | INFO     | mean y: 2555752.9631093545
[2025-04-18 03:10:09] 2025-04-18 07:09:48,300 | INFO     | -- intersect: -6285388060.9635515
[2025-04-18 03:10:09] 2025-04-18 07:09:48,300 | INFO     | intersect: -6285388060.9635515
[2025-04-18 03:10:09] 2025-04-18 07:09:48,301 | INFO     | chi2: 3.917947570376801
[2025-04-18 03:10:09] 2025-04-18 07:09:48,301 | INFO     | current chi2=3.917947570376801 (change=46.567887512634805 %)
[2025-04-18 03:10:09] 2025-04-18 07:09:48,302 | INFO     | sum of square deviations: 132928170722.82883
[2025-04-18 03:10:09] 2025-04-18 07:09:48,317 | INFO     | sum of deviations: 303154041140.7825
[2025-04-18 03:10:09] 2025-04-18 07:09:48,317 | INFO     | mean x: 1744937158.7175066
[2025-04-18 03:10:09] 2025-04-18 07:09:48,317 | INFO     | mean y: 2566375.50132626
[2025-04-18 03:10:09] 2025-04-18 07:09:48,317 | INFO     | -- intersect: -3976911776.6875253
[2025-04-18 03:10:09] 2025-04-18 07:09:48,318 | INFO     | intersect: -3976911776.6875253
[2025-04-18 03:10:09] 2025-04-18 07:09:48,319 | INFO     | chi2: 1.9206132323298102
[2025-04-18 03:10:09] 2025-04-18 07:09:48,319 | INFO     | current chi2=1.9206132323298102 (change=50.97909816733206 %)
[2025-04-18 03:10:09] 2025-04-18 07:09:48,320 | INFO     | sum of square deviations: 130301124434.31747
[2025-04-18 03:10:09] 2025-04-18 07:09:48,334 | INFO     | sum of deviations: 141858611883.23373
[2025-04-18 03:10:09] 2025-04-18 07:09:48,335 | INFO     | mean x: 1744937311.224299
[2025-04-18 03:10:09] 2025-04-18 07:09:48,335 | INFO     | mean y: 2575734.20694259
[2025-04-18 03:10:09] 2025-04-18 07:09:48,335 | INFO     | -- intersect: -1897134539.7310162
[2025-04-18 03:10:09] 2025-04-18 07:09:48,335 | INFO     | intersect: -1897134539.7310162
[2025-04-18 03:10:09] 2025-04-18 07:09:48,336 | INFO     | chi2: 0.37133561312910635
[2025-04-18 03:10:09] 2025-04-18 07:09:48,336 | INFO     | current chi2=0.37133561312910635 (change=80.66577867535278 %)
[2025-04-18 03:10:09] 2025-04-18 07:09:48,338 | INFO     | sum of square deviations: 127708916496.23654
[2025-04-18 03:10:09] 2025-04-18 07:09:48,352 | INFO     | sum of deviations: 69266626655.2258
[2025-04-18 03:10:09] 2025-04-18 07:09:48,352 | INFO     | mean x: 1744937463.7311828
[2025-04-18 03:10:09] 2025-04-18 07:09:48,352 | INFO     | mean y: 2580001.0161290322
[2025-04-18 03:10:09] 2025-04-18 07:09:48,352 | INFO     | -- intersect: -943837329.5274767
[2025-04-18 03:10:09] 2025-04-18 07:09:48,352 | INFO     | intersect: -943837329.5274767
[2025-04-18 03:10:09] 2025-04-18 07:09:48,353 | INFO     | chi2: 0.05720684825677725
[2025-04-18 03:10:09] 2025-04-18 07:09:48,354 | INFO     | current chi2=0.05720684825677725 (change=84.5943006180537 %)
[2025-04-18 03:10:09] 2025-04-18 07:09:48,355 | INFO     | sum of square deviations: 125151268228.60649
[2025-04-18 03:10:09] 2025-04-18 07:09:48,370 | INFO     | sum of deviations: 46177796717.98108
[2025-04-18 03:10:09] 2025-04-18 07:09:48,370 | INFO     | mean x: 1744937616.239513
[2025-04-18 03:10:09] 2025-04-18 07:09:48,370 | INFO     | mean y: 2581373.836265223
[2025-04-18 03:10:09] 2025-04-18 07:09:48,370 | INFO     | -- intersect: -641258482.2735486
[2025-04-18 03:10:09] 2025-04-18 07:09:48,370 | INFO     | intersect: -641258482.2735486
[2025-04-18 03:10:09] 2025-04-18 07:09:48,371 | INFO     | chi2: 0.006384452572782946
[2025-04-18 03:10:09] 2025-04-18 07:09:48,372 | INFO     | current chi2=0.006384452572782946 (change=88.83970579164605 %)
[2025-04-18 03:10:09] 2025-04-18 07:09:48,373 | INFO     | sum of square deviations: 122628172896.33377
[2025-04-18 03:10:09] 2025-04-18 07:09:48,386 | INFO     | sum of deviations: 42809949272.94139
[2025-04-18 03:10:09] 2025-04-18 07:09:48,387 | INFO     | mean x: 1744937768.7425067
[2025-04-18 03:10:09] 2025-04-18 07:09:48,387 | INFO     | mean y: 2581577.216621253
[2025-04-18 03:10:09] 2025-04-18 07:09:48,387 | INFO     | -- intersect: -606582659.6790553
[2025-04-18 03:10:09] 2025-04-18 07:09:48,387 | INFO     | intersect: -606582659.6790553
[2025-04-18 03:10:09] 2025-04-18 07:09:48,388 | INFO     | chi2: 0.005980357426444746
[2025-04-18 03:10:09] 2025-04-18 07:09:48,389 | INFO     | current chi2=0.005980357426444746 (change=6.3293624900726115 %)
[2025-04-18 03:10:09] 2025-04-18 07:09:48,389 | INFO     | left removable region: 60
[2025-04-18 03:10:09] 2025-04-18 07:09:48,390 | INFO     | sum of square deviations: 105455822271.13472
[2025-04-18 03:10:09] 2025-04-18 07:09:48,402 | INFO     | sum of deviations: 52941676800.699135
[2025-04-18 03:10:09] 2025-04-18 07:09:48,403 | INFO     | mean x: 1744938500.7765043
[2025-04-18 03:10:09] 2025-04-18 07:09:48,403 | INFO     | mean y: 2580779.7865329515
[2025-04-18 03:10:09] 2025-04-18 07:09:48,403 | INFO     | -- intersect: -873425572.0267452
[2025-04-18 03:10:09] 2025-04-18 07:09:48,403 | INFO     | intersect: -873425572.0267452
[2025-04-18 03:10:09] 2025-04-18 07:09:48,405 | INFO     | chi2: 0.0021554659651184544
[2025-04-18 03:10:09] 2025-04-18 07:09:48,405 | INFO     | -- intersect: -873425572.0267452
[2025-04-18 03:10:09] 2025-04-18 07:09:48,405 | INFO     | current memory leak: 0.50 B/s (using 698 data points, chi2=0.00)
[2025-04-18 03:10:09] 2025-04-18 07:09:48,407 | INFO     | ..............................
[2025-04-18 03:10:09] 2025-04-18 07:09:48,407 | INFO     | . Timing measurements:
[2025-04-18 03:10:09] 2025-04-18 07:09:48,407 | INFO     | . get job = 0 s
[2025-04-18 03:10:09] 2025-04-18 07:09:48,407 | INFO     | . initial setup = 2 s
[2025-04-18 03:10:09] 2025-04-18 07:09:48,407 | INFO     | . payload setup = 37 s
[2025-04-18 03:10:09] 2025-04-18 07:09:48,407 | INFO     | . stage-in = 0 s
[2025-04-18 03:10:09] 2025-04-18 07:09:48,407 | INFO     | . payload execution = 46637 s
[2025-04-18 03:10:09] 2025-04-18 07:09:48,407 | INFO     | . stage-out = 2 s
[2025-04-18 03:10:09] 2025-04-18 07:09:48,408 | INFO     | . log creation = 0 s
[2025-04-18 03:10:09] 2025-04-18 07:09:48,408 | INFO     | ..............................
[2025-04-18 03:10:09] 2025-04-18 07:09:48,520 | INFO     | 
[2025-04-18 03:10:09] 2025-04-18 07:09:48,521 | INFO     | job summary report
[2025-04-18 03:10:09] 2025-04-18 07:09:48,521 | INFO     | --------------------------------------------------
[2025-04-18 03:10:09] 2025-04-18 07:09:48,521 | INFO     | PanDA job id: 6605317232
[2025-04-18 03:10:09] 2025-04-18 07:09:48,521 | INFO     | task id: 44075483
[2025-04-18 03:10:09] 2025-04-18 07:09:48,521 | INFO     | errors: (none)
[2025-04-18 03:10:09] 2025-04-18 07:09:48,521 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-18 03:10:09] 2025-04-18 07:09:48,521 | INFO     | pilot state: finished 
[2025-04-18 03:10:09] 2025-04-18 07:09:48,521 | INFO     | transexitcode: 0
[2025-04-18 03:10:09] 2025-04-18 07:09:48,522 | INFO     | exeerrorcode: 0
[2025-04-18 03:10:09] 2025-04-18 07:09:48,522 | INFO     | exeerrordiag: 
[2025-04-18 03:10:09] 2025-04-18 07:09:48,522 | INFO     | exitcode: 0
[2025-04-18 03:10:09] 2025-04-18 07:09:48,522 | INFO     | exitmsg: OK
[2025-04-18 03:10:09] 2025-04-18 07:09:48,522 | INFO     | cpuconsumptiontime: 56251 s
[2025-04-18 03:10:09] 2025-04-18 07:09:48,522 | INFO     | nevents: 400
[2025-04-18 03:10:09] 2025-04-18 07:09:48,522 | INFO     | neventsw: 0
[2025-04-18 03:10:09] 2025-04-18 07:09:48,522 | INFO     | pid: 24367
[2025-04-18 03:10:09] 2025-04-18 07:09:48,522 | INFO     | pgrp: 24367
[2025-04-18 03:10:09] 2025-04-18 07:09:48,522 | INFO     | corecount: 10
[2025-04-18 03:10:09] 2025-04-18 07:09:48,523 | INFO     | event service: False
[2025-04-18 03:10:09] 2025-04-18 07:09:48,523 | INFO     | sizes: {0: 2426597, 1: 2426852, 2: 2426852, 12: 2426880, 18: 2427114, 23: 2427142, 46678: 2470999, 46681: 2479996, 46689: 2480110}
[2025-04-18 03:10:09] 2025-04-18 07:09:48,523 | INFO     | --------------------------------------------------
[2025-04-18 03:10:09] 2025-04-18 07:09:48,523 | INFO     | 
[2025-04-18 03:10:09] 2025-04-18 07:09:48,523 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-04-18 03:10:09] 2025-04-18 07:09:48,574 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-18 03:10:09] 2025-04-18 07:09:48,575 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-18 03:10:09] 2025-04-18 07:09:48,575 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-18 03:10:09] 2025-04-18 07:09:48,575 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-18 03:10:09] 2025-04-18 07:09:48,575 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-18 03:10:09] 2025-04-18 07:09:48,575 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-18 03:10:09] 2025-04-18 07:09:48,575 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-18 03:10:09] 2025-04-18 07:09:48,575 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-18 03:10:09] 2025-04-18 07:09:48,576 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-18 03:10:09] 2025-04-18 07:09:48,576 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-18 03:10:09] 2025-04-18 07:09:48,576 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-18 03:10:09] 2025-04-18 07:09:48,576 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-18 03:10:09] 2025-04-18 07:09:48,576 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-18 03:10:09] 2025-04-18 07:09:48,576 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-18 03:10:09] 2025-04-18 07:09:48,577 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-18 03:10:09] 2025-04-18 07:09:48,577 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-18 03:10:09] 2025-04-18 07:09:48,577 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-18 03:10:09] 2025-04-18 07:09:48,577 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-18 03:10:09] 2025-04-18 07:09:48,577 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-18 03:10:09] 2025-04-18 07:09:48,577 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-18 03:10:09] 2025-04-18 07:09:48,577 | INFO     | job 6605317232 has completed (purged errors)
[2025-04-18 03:10:09] 2025-04-18 07:09:48,577 | INFO     | overall cleanup function is called
[2025-04-18 03:10:09] 2025-04-18 07:09:49,599 | INFO     | --- collectZombieJob: --- 10, [24367]
[2025-04-18 03:10:09] 2025-04-18 07:09:49,599 | INFO     | zombie collector waiting for pid 24367
[2025-04-18 03:10:09] 2025-04-18 07:09:49,599 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-18 03:10:09] 2025-04-18 07:09:49,599 | INFO     | collected zombie processes
[2025-04-18 03:10:09] 2025-04-18 07:09:49,599 | INFO     | will attempt to kill all subprocesses of pid=24367
[2025-04-18 03:10:09] 2025-04-18 07:09:49,895 | INFO     | process IDs to be killed: [24367] (in reverse order)
[2025-04-18 03:10:09] 2025-04-18 07:09:50,018 | WARNING  | found no corresponding commands to process id(s)
[2025-04-18 03:10:09] 2025-04-18 07:09:50,019 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-18 03:10:09] 2025-04-18 07:09:50,027 | INFO     | did not find any defunct processes belonging to 24367
[2025-04-18 03:10:09] 2025-04-18 07:09:50,036 | INFO     | did not find any defunct processes belonging to 24367
[2025-04-18 03:10:09] 2025-04-18 07:09:50,037 | INFO     | ready for new job
[2025-04-18 03:10:09] 2025-04-18 07:09:50,037 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-18 03:10:09] 2025-04-18 07:09:50,040 | INFO     | **************************************
[2025-04-18 03:10:09] 2025-04-18 07:09:50,040 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-18 03:10:09] 2025-04-18 07:09:50,040 | INFO     | **************************************
[2025-04-18 03:10:09] 2025-04-18 07:09:50,040 | INFO     | 
[2025-04-18 03:10:09] 2025-04-18 07:09:50,042 | INFO     | architecture information:
[2025-04-18 03:10:09] 2025-04-18 07:09:50,043 | INFO     | executing command: cat /etc/os-release
[2025-04-18 03:10:09] 2025-04-18 07:09:50,057 | INFO     | cat /etc/os-release:
[2025-04-18 03:10:09] NAME="CentOS Linux"
[2025-04-18 03:10:09] VERSION="7 (Core)"
[2025-04-18 03:10:09] ID="centos"
[2025-04-18 03:10:09] ID_LIKE="rhel fedora"
[2025-04-18 03:10:09] VERSION_ID="7"
[2025-04-18 03:10:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-18 03:10:09] ANSI_COLOR="0;31"
[2025-04-18 03:10:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-18 03:10:09] HOME_URL="https://www.centos.org/"
[2025-04-18 03:10:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-18 03:10:09] 
[2025-04-18 03:10:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-18 03:10:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-18 03:10:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-18 03:10:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-18 03:10:09] 
[2025-04-18 03:10:09] 2025-04-18 07:09:50,057 | INFO     | **************************************
[2025-04-18 03:10:09] 2025-04-18 07:09:50,563 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-04-18 03:10:09] 2025-04-18 07:09:50,610 | INFO     | sufficient remaining disk space (56722718720 B)
[2025-04-18 03:10:09] 2025-04-18 07:09:50,611 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-18 03:10:09] 2025-04-18 07:09:50,611 | INFO     | current server update state: UPDATING_FINAL
[2025-04-18 03:10:09] 2025-04-18 07:09:50,612 | INFO     | update_server=False
[2025-04-18 03:10:09] 2025-04-18 07:09:50,612 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-18 03:10:09] 2025-04-18 07:09:50,612 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-18 03:10:09] 2025-04-18 07:09:50,612 | INFO     | aborting loop
[2025-04-18 03:10:09] 2025-04-18 07:09:50,635 | INFO     | all job control threads have been joined
[2025-04-18 03:10:09] 2025-04-18 07:09:50,781 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-18 03:10:09] 2025-04-18 07:09:50,890 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-18 03:10:09] 2025-04-18 07:09:51,544 | INFO     | all payload control threads have been joined
[2025-04-18 03:10:09] 2025-04-18 07:09:51,618 | INFO     | [job] retrieve thread has finished
[2025-04-18 03:10:09] 2025-04-18 07:09:51,622 | INFO     | [job] job monitor thread has finished
[2025-04-18 03:10:09] 2025-04-18 07:09:51,659 | INFO     | [job] control thread has finished
[2025-04-18 03:10:09] 2025-04-18 07:09:51,659 | INFO     | all data control threads have been joined
[2025-04-18 03:10:09] 2025-04-18 07:09:51,776 | INFO     | [job] create_data_payload thread has finished
[2025-04-18 03:10:09] 2025-04-18 07:09:51,978 | INFO     | PID=30115 has CPU usage=13.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-04-18 03:10:09] 2025-04-18 07:09:51,978 | INFO     | .. there are 28 such processes running
[2025-04-18 03:10:09] 2025-04-18 07:09:51,978 | INFO     | found 0 job(s) in 20 queues
[2025-04-18 03:10:09] 2025-04-18 07:09:51,978 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-18 03:10:09] 2025-04-18 07:09:51,978 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-18 03:10:09] 2025-04-18 07:09:52,142 | INFO     | [payload] execute_payloads thread has finished
[2025-04-18 03:10:09] 2025-04-18 07:09:52,549 | INFO     | [payload] control thread has finished
[2025-04-18 03:10:09] 2025-04-18 07:09:52,665 | INFO     | [data] control thread has finished
[2025-04-18 03:10:09] 2025-04-18 07:09:52,787 | INFO     | [data] copytool_out thread has finished
[2025-04-18 03:10:09] 2025-04-18 07:09:52,885 | INFO     | [payload] validate_pre thread has finished
[2025-04-18 03:10:09] 2025-04-18 07:09:52,916 | INFO     | [job] validate thread has finished
[2025-04-18 03:10:09] 2025-04-18 07:09:53,005 | INFO     | [data] copytool_in thread has finished
[2025-04-18 03:10:09] 2025-04-18 07:09:53,028 | INFO     | [payload] failed_post thread has finished
[2025-04-18 03:10:09] 2025-04-18 07:09:53,125 | INFO     | [payload] validate_post thread has finished
[2025-04-18 03:10:09] 2025-04-18 07:09:53,530 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-18 03:10:09] 2025-04-18 07:09:54,536 | INFO     | [job] queue monitor thread has finished
[2025-04-18 03:10:09] 2025-04-18 07:09:54,897 | INFO     | [data] queue_monitor thread has finished
[2025-04-18 03:10:09] 2025-04-18 07:10:00,812 | INFO     | job.realtimelogging is not enabled
[2025-04-18 03:10:09] 2025-04-18 07:10:01,818 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-18 03:10:09] 2025-04-18 07:10:02,972 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140289977571136)>', '<ExcThread(monitor, started 140289469576960)>']
[2025-04-18 03:10:09] 2025-04-18 07:10:03,024 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-18 03:10:09] 2025-04-18 07:10:03,024 | INFO     | [monitor] control thread has ended
[2025-04-18 03:10:09] 2025-04-18 07:10:07,998 | INFO     | all workflow threads have been joined
[2025-04-18 03:10:09] 2025-04-18 07:10:07,998 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-18 03:10:09] 2025-04-18 07:10:07,998 | INFO     | traces error code: 0
[2025-04-18 03:10:09] 2025-04-18 07:10:07,998 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-18 03:10:09] 2025-04-18 07:10:08,274 [wrapper] ==== pilot stdout END ====
[2025-04-18 03:10:09] 2025-04-18 07:10:08,313 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-18 03:10:09] 2025-04-18 07:10:08,349 [wrapper] pilotpid: 30115
[2025-04-18 03:10:09] 2025-04-18 07:10:08,374 [wrapper] Pilot exit status: 0
[2025-04-18 03:10:09] 2025-04-18 07:10:08,441 [wrapper] pandaids: 6605317232 6605317232
[2025-04-18 03:10:09] 2025-04-18 07:10:08,671 [wrapper] cleanup supervisor_pilot 13143 30116
[2025-04-18 03:10:09] 2025-04-18 07:10:08,694 [wrapper] Test setup, not cleaning
[2025-04-18 03:10:09] 2025-04-18 07:10:08,707 [wrapper] apfmon messages muted
[2025-04-18 03:10:09] 2025-04-18 07:10:08,746 [wrapper] ==== wrapper stdout END ====
[2025-04-18 03:10:09] 2025-04-18 07:10:08,757 [wrapper] ==== wrapper stderr END ====
[2025-04-18 03:10:09]  *** Error codes and diagnostics ***
[2025-04-18 03:10:09]     "exeErrorCode": 0,
[2025-04-18 03:10:09]     "exeErrorDiag": "",
[2025-04-18 03:10:09]     "pilotErrorCode": 0,
[2025-04-18 03:10:09]     "pilotErrorDiag": "",
[2025-04-18 03:10:09]  *** Listing of results directory ***
[2025-04-18 03:10:09] total 647268
[2025-04-18 03:10:09] drwx------ 4 boincer umatlas      4096 Apr  3 04:00 pilot3
[2025-04-18 03:10:09] -rw-r--r-- 1 boincer umatlas    495897 Apr 17 09:20 pilot3.tar.gz
[2025-04-18 03:10:09] -rwx------ 1 boincer umatlas     37140 Apr 17 09:22 runpilot2-wrapper.sh
[2025-04-18 03:10:09] -rw-r--r-- 1 boincer umatlas      5111 Apr 17 09:22 queuedata.json
[2025-04-18 03:10:09] -rw-r--r-- 1 boincer umatlas       100 Apr 17 12:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-18 03:10:09] -rwxr-xr-x 1 boincer umatlas      7986 Apr 17 12:39 run_atlas
[2025-04-18 03:10:09] -rw-r--r-- 1 boincer umatlas       105 Apr 17 12:39 job.xml
[2025-04-18 03:10:09] -rw-r--r-- 3 boincer umatlas 225699903 Apr 17 12:39 EVNT.44075481._002188.pool.root.1
[2025-04-18 03:10:09] -rw-r--r-- 3 boincer umatlas 225699903 Apr 17 12:39 ATLAS.root_0
[2025-04-18 03:10:09] -rw-r--r-- 2 boincer umatlas     17569 Apr 17 12:39 start_atlas.sh
[2025-04-18 03:10:09] drwxrwx--x 2 boincer umatlas      4096 Apr 17 12:39 shared
[2025-04-18 03:10:09] -rw-r--r-- 2 boincer umatlas    508888 Apr 17 12:39 input.tar.gz
[2025-04-18 03:10:09] -rw-r--r-- 1 boincer umatlas         0 Apr 17 12:39 boinc_lockfile
[2025-04-18 03:10:09] -rw-r--r-- 1 boincer umatlas      2579 Apr 17 14:10 pandaJob.out
[2025-04-18 03:10:09] -rw------- 1 boincer umatlas       467 Apr 17 14:10 setup.sh.local
[2025-04-18 03:10:09] -rw------- 1 boincer umatlas    990266 Apr 17 14:10 agis_schedconf.cvmfs.json
[2025-04-18 03:10:09] -rw-r--r-- 1 boincer umatlas      6229 Apr 18 03:01 init_data.xml
[2025-04-18 03:10:09] -rw------- 1 boincer umatlas 199648084 Apr 18 03:08 HITS.44075483._056210.pool.root.1
[2025-04-18 03:10:09] -rw-r--r-- 1 boincer umatlas       531 Apr 18 03:09 boinc_task_state.xml
[2025-04-18 03:10:09] -rw------- 1 boincer umatlas        96 Apr 18 03:09 pilot_heartbeat.json
[2025-04-18 03:10:09] -rw------- 1 boincer umatlas      1061 Apr 18 03:09 memory_monitor_summary.json
[2025-04-18 03:10:09] -rw------- 1 boincer umatlas   1618536 Apr 18 03:09 agis_ddmendpoints.agis.ALL.json
[2025-04-18 03:10:09] -rw------- 1 boincer umatlas    660487 Apr 18 03:09 log.44075483._056210.job.log.tgz.1
[2025-04-18 03:10:09] -rw------- 1 boincer umatlas      7755 Apr 18 03:09 heartbeat.json
[2025-04-18 03:10:09] -rw-r--r-- 1 boincer umatlas      8192 Apr 18 03:10 boinc_mmap_file
[2025-04-18 03:10:09] -rw-r--r-- 1 boincer umatlas        28 Apr 18 03:10 wrapper_checkpoint.txt
[2025-04-18 03:10:09] -rw------- 1 boincer umatlas      4819 Apr 18 03:10 pilotlog.txt
[2025-04-18 03:10:09] -rw------- 1 boincer umatlas   3282904 Apr 18 03:10 log.44075483._056210.job.log.1
[2025-04-18 03:10:09] -rw------- 1 boincer umatlas       357 Apr 18 03:10 output.list
[2025-04-18 03:10:09] -rw-r--r-- 1 boincer umatlas       620 Apr 18 03:10 runtime_log
[2025-04-18 03:10:09] -rw------- 1 boincer umatlas   3962880 Apr 18 03:10 result.tar.gz
[2025-04-18 03:10:09] -rw-r--r-- 1 boincer umatlas     11506 Apr 18 03:10 runtime_log.err
[2025-04-18 03:10:09] -rw------- 1 boincer umatlas       788 Apr 18 03:10 7ZtNDmANeP7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmN1cLDmMDuKLo.diag
[2025-04-18 03:10:09] -rw-r--r-- 1 boincer umatlas     23142 Apr 18 03:10 stderr.txt
[2025-04-18 03:10:09] HITS file was successfully produced:
[2025-04-18 03:10:09] -rw------- 1 boincer umatlas 199648084 Apr 18 03:08 shared/HITS.pool.root.1
[2025-04-18 03:10:09]  *** Contents of shared directory: ***
[2025-04-18 03:10:09] total 419780
[2025-04-18 03:10:09] -rw-r--r-- 3 boincer umatlas 225699903 Apr 17 12:39 ATLAS.root_0
[2025-04-18 03:10:09] -rw-r--r-- 2 boincer umatlas     17569 Apr 17 12:39 start_atlas.sh
[2025-04-18 03:10:09] -rw-r--r-- 2 boincer umatlas    508888 Apr 17 12:39 input.tar.gz
[2025-04-18 03:10:09] -rw------- 1 boincer umatlas 199648084 Apr 18 03:08 HITS.pool.root.1
[2025-04-18 03:10:09] -rw------- 1 boincer umatlas   3962880 Apr 18 03:10 result.tar.gz
03:10:11 (15652): run_atlas exited; CPU time 57596.555085
03:10:11 (15652): called boinc_finish(0)

</stderr_txt>
]]>

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