Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
12:20:50 (39803): wrapper (7.7.26015): starting
12:20:50 (39803): wrapper: running run_atlas (--nthreads 10)
[2025-04-17 12:20:50] Arguments: --nthreads 10
[2025-04-17 12:20:50] Threads: 10
[2025-04-17 12:20:50] Checking for CVMFS
[2025-04-17 12:20:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-17 12:20:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-17 12:20:52] Running cvmfs_config stat atlas.cern.ch
[2025-04-17 12:20:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-17 12:20:54] 2.11.2.0 1570 39955 231744 144972 2 74 16030450 18432001 15254 130560 0 161042004 98.899 405267947 35867 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-17 12:20:54] CVMFS is ok
[2025-04-17 12:20:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-17 12:20:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-17 12:20:54] Further information can be found at the LHC@home message board.
[2025-04-17 12:20:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-17 12:20:54] Checking for apptainer binary...
[2025-04-17 12:20:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-17 12:20:54] Running /usr/bin/apptainer --version
[2025-04-17 12:20:54] apptainer version 1.3.2-1.el7
[2025-04-17 12:20:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-17 12:21:18] c-210-9.aglt2.org
[2025-04-17 12:21:18] apptainer works
[2025-04-17 12:21:19] Set ATHENA_PROC_NUMBER=10
[2025-04-17 12:21:19] Set ATHENA_CORE_NUMBER=10
[2025-04-17 12:21:19] Starting ATLAS job with PandaID=6605310387
[2025-04-17 12:21:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-18 06:15:28]  *** The last 200 lines of the pilot log: ***
[2025-04-18 06:15:29] 2025-04-18 10:15:04,872 | INFO     | extracted standard info from prmon json
[2025-04-18 06:15:29] 2025-04-18 10:15:04,872 | INFO     | extracted standard memory fields from prmon json
[2025-04-18 06:15:29] 2025-04-18 10:15:04,872 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-18 06:15:29] 2025-04-18 10:15:04,898 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-18 06:15:29] 2025-04-18 10:15:04,898 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-18 06:15:29] 2025-04-18 10:15:05,001 | INFO     | fitting pss+swap vs Time
[2025-04-18 06:15:29] 2025-04-18 10:15:05,002 | INFO     | sum of square deviations: 356910499200.1176
[2025-04-18 06:15:29] 2025-04-18 10:15:05,030 | INFO     | sum of deviations: 2587481944798.715
[2025-04-18 06:15:29] 2025-04-18 10:15:05,031 | INFO     | mean x: 1744939281.730916
[2025-04-18 06:15:29] 2025-04-18 10:15:05,031 | INFO     | mean y: 2495560.623091603
[2025-04-18 06:15:29] 2025-04-18 10:15:05,031 | INFO     | -- intersect: -12647731586.988081
[2025-04-18 06:15:29] 2025-04-18 10:15:05,031 | INFO     | intersect: -12647731586.988081
[2025-04-18 06:15:29] 2025-04-18 10:15:05,033 | INFO     | chi2: 16.048544737944155
[2025-04-18 06:15:29] 2025-04-18 10:15:05,034 | INFO     | sum of square deviations: 351826677819.9792
[2025-04-18 06:15:29] 2025-04-18 10:15:05,062 | INFO     | sum of deviations: 2721394655391.1953
[2025-04-18 06:15:29] 2025-04-18 10:15:05,062 | INFO     | mean x: 1744939129.2358582
[2025-04-18 06:15:29] 2025-04-18 10:15:05,062 | INFO     | mean y: 2499564.6577181206
[2025-04-18 06:15:29] 2025-04-18 10:15:05,062 | INFO     | -- intersect: -13494680494.880587
[2025-04-18 06:15:29] 2025-04-18 10:15:05,063 | INFO     | intersect: -13494680494.880587
[2025-04-18 06:15:29] 2025-04-18 10:15:05,064 | INFO     | chi2: 14.43600788445473
[2025-04-18 06:15:29] 2025-04-18 10:15:05,064 | INFO     | current chi2=14.43600788445473 (change=10.047869634415175 %)
[2025-04-18 06:15:29] 2025-04-18 10:15:05,064 | INFO     | right removable region: 1042
[2025-04-18 06:15:29] 2025-04-18 10:15:05,066 | INFO     | sum of square deviations: 351825954602.50616
[2025-04-18 06:15:29] 2025-04-18 10:15:05,093 | INFO     | sum of deviations: 2206354761269.736
[2025-04-18 06:15:29] 2025-04-18 10:15:05,093 | INFO     | mean x: 1744939434.236817
[2025-04-18 06:15:29] 2025-04-18 10:15:05,094 | INFO     | mean y: 2506991.0172579098
[2025-04-18 06:15:29] 2025-04-18 10:15:05,094 | INFO     | -- intersect: -10940277014.800076
[2025-04-18 06:15:29] 2025-04-18 10:15:05,094 | INFO     | intersect: -10940277014.800076
[2025-04-18 06:15:29] 2025-04-18 10:15:05,095 | INFO     | chi2: 11.23185368469414
[2025-04-18 06:15:29] 2025-04-18 10:15:05,096 | INFO     | current chi2=11.23185368469414 (change=30.013257475375553 %)
[2025-04-18 06:15:29] 2025-04-18 10:15:05,097 | INFO     | sum of square deviations: 346789922542.3208
[2025-04-18 06:15:29] 2025-04-18 10:15:05,124 | INFO     | sum of deviations: 1889712519936.3508
[2025-04-18 06:15:29] 2025-04-18 10:15:05,124 | INFO     | mean x: 1744939586.7427745
[2025-04-18 06:15:29] 2025-04-18 10:15:05,125 | INFO     | mean y: 2516578.0799614643
[2025-04-18 06:15:29] 2025-04-18 10:15:05,125 | INFO     | -- intersect: -9505932108.741318
[2025-04-18 06:15:29] 2025-04-18 10:15:05,125 | INFO     | intersect: -9505932108.741318
[2025-04-18 06:15:29] 2025-04-18 10:15:05,126 | INFO     | chi2: 8.04407499528953
[2025-04-18 06:15:29] 2025-04-18 10:15:05,127 | INFO     | current chi2=8.04407499528953 (change=28.38159024230041 %)
[2025-04-18 06:15:29] 2025-04-18 10:15:05,128 | INFO     | sum of square deviations: 341802233532.55524
[2025-04-18 06:15:29] 2025-04-18 10:15:05,155 | INFO     | sum of deviations: 1636683838144.687
[2025-04-18 06:15:29] 2025-04-18 10:15:05,155 | INFO     | mean x: 1744939739.2478218
[2025-04-18 06:15:29] 2025-04-18 10:15:05,155 | INFO     | mean y: 2524314.0832526623
[2025-04-18 06:15:29] 2025-04-18 10:15:05,156 | INFO     | -- intersect: -8352935041.015726
[2025-04-18 06:15:29] 2025-04-18 10:15:05,156 | INFO     | intersect: -8352935041.015726
[2025-04-18 06:15:29] 2025-04-18 10:15:05,157 | INFO     | chi2: 6.110324820232669
[2025-04-18 06:15:29] 2025-04-18 10:15:05,157 | INFO     | current chi2=6.110324820232669 (change=24.039434940490125 %)
[2025-04-18 06:15:29] 2025-04-18 10:15:05,158 | INFO     | left removable region: 30
[2025-04-18 06:15:29] 2025-04-18 10:15:05,159 | INFO     | sum of square deviations: 321377090995.6076
[2025-04-18 06:15:29] 2025-04-18 10:15:05,348 | INFO     | sum of deviations: 1254844422265.078
[2025-04-18 06:15:29] 2025-04-18 10:15:05,349 | INFO     | mean x: 1744940013.7618577
[2025-04-18 06:15:29] 2025-04-18 10:15:05,349 | INFO     | mean y: 2544683.6600790513
[2025-04-18 06:15:29] 2025-04-18 10:15:05,349 | INFO     | -- intersect: -6810723295.936332
[2025-04-18 06:15:29] 2025-04-18 10:15:05,349 | INFO     | intersect: -6810723295.936332
[2025-04-18 06:15:29] 2025-04-18 10:15:05,350 | INFO     | chi2: 1.6664204178416802
[2025-04-18 06:15:29] 2025-04-18 10:15:05,381 | INFO     | -- intersect: -6810723295.936332
[2025-04-18 06:15:29] 2025-04-18 10:15:05,381 | INFO     | current memory leak: 3.90 B/s (using 1012 data points, chi2=1.67)
[2025-04-18 06:15:29] 2025-04-18 10:15:05,382 | INFO     | ..............................
[2025-04-18 06:15:29] 2025-04-18 10:15:05,382 | INFO     | . Timing measurements:
[2025-04-18 06:15:29] 2025-04-18 10:15:05,389 | INFO     | . get job = 0 s
[2025-04-18 06:15:29] 2025-04-18 10:15:05,389 | INFO     | . initial setup = 13 s
[2025-04-18 06:15:29] 2025-04-18 10:15:05,389 | INFO     | . payload setup = 87 s
[2025-04-18 06:15:29] 2025-04-18 10:15:05,389 | INFO     | . stage-in = 0 s
[2025-04-18 06:15:29] 2025-04-18 10:15:05,389 | INFO     | . payload execution = 63982 s
[2025-04-18 06:15:29] 2025-04-18 10:15:05,389 | INFO     | . stage-out = 10 s
[2025-04-18 06:15:29] 2025-04-18 10:15:05,389 | INFO     | . log creation = 1 s
[2025-04-18 06:15:29] 2025-04-18 10:15:05,389 | INFO     | ..............................
[2025-04-18 06:15:29] 2025-04-18 10:15:06,640 | INFO     | 
[2025-04-18 06:15:29] 2025-04-18 10:15:06,640 | INFO     | job summary report
[2025-04-18 06:15:29] 2025-04-18 10:15:06,640 | INFO     | --------------------------------------------------
[2025-04-18 06:15:29] 2025-04-18 10:15:06,640 | INFO     | PanDA job id: 6605310387
[2025-04-18 06:15:29] 2025-04-18 10:15:06,640 | INFO     | task id: 44075483
[2025-04-18 06:15:29] 2025-04-18 10:15:06,640 | INFO     | errors: (none)
[2025-04-18 06:15:29] 2025-04-18 10:15:06,640 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-18 06:15:29] 2025-04-18 10:15:06,641 | INFO     | pilot state: finished 
[2025-04-18 06:15:29] 2025-04-18 10:15:06,641 | INFO     | transexitcode: 0
[2025-04-18 06:15:29] 2025-04-18 10:15:06,641 | INFO     | exeerrorcode: 0
[2025-04-18 06:15:29] 2025-04-18 10:15:06,641 | INFO     | exeerrordiag: 
[2025-04-18 06:15:29] 2025-04-18 10:15:06,641 | INFO     | exitcode: 0
[2025-04-18 06:15:29] 2025-04-18 10:15:06,641 | INFO     | exitmsg: OK
[2025-04-18 06:15:29] 2025-04-18 10:15:06,641 | INFO     | cpuconsumptiontime: 56907 s
[2025-04-18 06:15:29] 2025-04-18 10:15:06,641 | INFO     | nevents: 400
[2025-04-18 06:15:29] 2025-04-18 10:15:06,641 | INFO     | neventsw: 0
[2025-04-18 06:15:29] 2025-04-18 10:15:06,668 | INFO     | pid: 7027
[2025-04-18 06:15:29] 2025-04-18 10:15:06,668 | INFO     | pgrp: 7027
[2025-04-18 06:15:29] 2025-04-18 10:15:06,668 | INFO     | corecount: 10
[2025-04-18 06:15:29] 2025-04-18 10:15:06,668 | INFO     | event service: False
[2025-04-18 06:15:29] 2025-04-18 10:15:06,668 | INFO     | sizes: {0: 2426546, 1: 2426602, 2: 2426630, 3: 2426857, 4: 2426857, 16: 2426885, 27: 2427041, 38: 2427069, 50: 2427097, 61: 2427331, 62: 2427359, 73: 2427667, 6407
[2025-04-18 06:15:29] 2025-04-18 10:15:06,668 | INFO     | --------------------------------------------------
[2025-04-18 06:15:29] 2025-04-18 10:15:06,684 | INFO     | 
[2025-04-18 06:15:29] 2025-04-18 10:15:06,684 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-04-18 06:15:29] 2025-04-18 10:15:07,175 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-18 06:15:29] 2025-04-18 10:15:07,201 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-18 06:15:29] 2025-04-18 10:15:07,201 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-18 06:15:29] 2025-04-18 10:15:07,201 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-18 06:15:29] 2025-04-18 10:15:07,201 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-18 06:15:29] 2025-04-18 10:15:07,201 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-18 06:15:29] 2025-04-18 10:15:07,201 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-18 06:15:29] 2025-04-18 10:15:07,215 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-18 06:15:29] 2025-04-18 10:15:07,216 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-18 06:15:29] 2025-04-18 10:15:07,216 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-18 06:15:29] 2025-04-18 10:15:07,216 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-18 06:15:29] 2025-04-18 10:15:07,216 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-18 06:15:29] 2025-04-18 10:15:07,216 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-18 06:15:29] 2025-04-18 10:15:07,216 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-18 06:15:29] 2025-04-18 10:15:07,231 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-18 06:15:29] 2025-04-18 10:15:07,231 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-18 06:15:29] 2025-04-18 10:15:07,231 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-18 06:15:29] 2025-04-18 10:15:07,231 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-18 06:15:29] 2025-04-18 10:15:07,231 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-18 06:15:29] 2025-04-18 10:15:07,246 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-18 06:15:29] 2025-04-18 10:15:07,246 | INFO     | job 6605310387 has completed (purged errors)
[2025-04-18 06:15:29] 2025-04-18 10:15:07,246 | INFO     | overall cleanup function is called
[2025-04-18 06:15:29] 2025-04-18 10:15:08,332 | INFO     | --- collectZombieJob: --- 10, [7027]
[2025-04-18 06:15:29] 2025-04-18 10:15:08,332 | INFO     | zombie collector waiting for pid 7027
[2025-04-18 06:15:29] 2025-04-18 10:15:08,332 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-18 06:15:29] 2025-04-18 10:15:08,332 | INFO     | collected zombie processes
[2025-04-18 06:15:29] 2025-04-18 10:15:08,332 | INFO     | will attempt to kill all subprocesses of pid=7027
[2025-04-18 06:15:29] 2025-04-18 10:15:10,377 | INFO     | process IDs to be killed: [7027] (in reverse order)
[2025-04-18 06:15:29] 2025-04-18 10:15:11,305 | WARNING  | found no corresponding commands to process id(s)
[2025-04-18 06:15:29] 2025-04-18 10:15:11,306 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-18 06:15:29] 2025-04-18 10:15:11,386 | INFO     | did not find any defunct processes belonging to 7027
[2025-04-18 06:15:29] 2025-04-18 10:15:11,575 | INFO     | did not find any defunct processes belonging to 7027
[2025-04-18 06:15:29] 2025-04-18 10:15:11,575 | INFO     | ready for new job
[2025-04-18 06:15:29] 2025-04-18 10:15:11,575 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-18 06:15:29] 2025-04-18 10:15:11,579 | INFO     | **************************************
[2025-04-18 06:15:29] 2025-04-18 10:15:11,579 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-18 06:15:29] 2025-04-18 10:15:11,579 | INFO     | **************************************
[2025-04-18 06:15:29] 2025-04-18 10:15:11,584 | INFO     | 
[2025-04-18 06:15:29] 2025-04-18 10:15:11,586 | INFO     | architecture information:
[2025-04-18 06:15:29] 2025-04-18 10:15:11,597 | INFO     | executing command: cat /etc/os-release
[2025-04-18 06:15:29] 2025-04-18 10:15:11,698 | INFO     | cat /etc/os-release:
[2025-04-18 06:15:29] NAME="CentOS Linux"
[2025-04-18 06:15:29] VERSION="7 (Core)"
[2025-04-18 06:15:29] ID="centos"
[2025-04-18 06:15:29] ID_LIKE="rhel fedora"
[2025-04-18 06:15:29] VERSION_ID="7"
[2025-04-18 06:15:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-18 06:15:29] ANSI_COLOR="0;31"
[2025-04-18 06:15:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-18 06:15:29] HOME_URL="https://www.centos.org/"
[2025-04-18 06:15:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-18 06:15:29] 
[2025-04-18 06:15:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-18 06:15:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-18 06:15:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-18 06:15:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-18 06:15:29] 
[2025-04-18 06:15:29] 2025-04-18 10:15:11,698 | INFO     | **************************************
[2025-04-18 06:15:29] 2025-04-18 10:15:12,202 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-04-18 06:15:29] 2025-04-18 10:15:12,447 | INFO     | sufficient remaining disk space (57145294848 B)
[2025-04-18 06:15:29] 2025-04-18 10:15:12,448 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-18 06:15:29] 2025-04-18 10:15:12,448 | INFO     | current server update state: UPDATING_FINAL
[2025-04-18 06:15:29] 2025-04-18 10:15:12,448 | INFO     | update_server=False
[2025-04-18 06:15:29] 2025-04-18 10:15:12,448 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-18 06:15:29] 2025-04-18 10:15:12,449 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-18 06:15:29] 2025-04-18 10:15:12,449 | INFO     | aborting loop
[2025-04-18 06:15:29] 2025-04-18 10:15:12,498 | INFO     | PID=31645 has CPU usage=6.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-04-18 06:15:29] 2025-04-18 10:15:12,498 | INFO     | .. there are 42 such processes running
[2025-04-18 06:15:29] 2025-04-18 10:15:12,498 | INFO     | found 0 job(s) in 20 queues
[2025-04-18 06:15:29] 2025-04-18 10:15:12,498 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-18 06:15:29] 2025-04-18 10:15:12,498 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-18 06:15:29] 2025-04-18 10:15:13,447 | INFO     | all payload control threads have been joined
[2025-04-18 06:15:29] 2025-04-18 10:15:13,454 | INFO     | [job] retrieve thread has finished
[2025-04-18 06:15:29] 2025-04-18 10:15:13,462 | INFO     | [job] job monitor thread has finished
[2025-04-18 06:15:29] 2025-04-18 10:15:13,465 | INFO     | all job control threads have been joined
[2025-04-18 06:15:29] 2025-04-18 10:15:13,551 | INFO     | all data control threads have been joined
[2025-04-18 06:15:29] 2025-04-18 10:15:13,588 | INFO     | [payload] validate_pre thread has finished
[2025-04-18 06:15:29] 2025-04-18 10:15:13,613 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-18 06:15:29] 2025-04-18 10:15:13,839 | INFO     | [job] create_data_payload thread has finished
[2025-04-18 06:15:29] 2025-04-18 10:15:14,088 | INFO     | [payload] execute_payloads thread has finished
[2025-04-18 06:15:29] 2025-04-18 10:15:14,115 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-18 06:15:29] 2025-04-18 10:15:14,306 | INFO     | [payload] failed_post thread has finished
[2025-04-18 06:15:29] 2025-04-18 10:15:14,454 | INFO     | [payload] control thread has finished
[2025-04-18 06:15:29] 2025-04-18 10:15:14,472 | INFO     | [job] control thread has finished
[2025-04-18 06:15:29] 2025-04-18 10:15:14,528 | INFO     | [job] validate thread has finished
[2025-04-18 06:15:29] 2025-04-18 10:15:14,547 | INFO     | [payload] validate_post thread has finished
[2025-04-18 06:15:29] 2025-04-18 10:15:14,558 | INFO     | [data] control thread has finished
[2025-04-18 06:15:29] 2025-04-18 10:15:14,613 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-18 06:15:29] 2025-04-18 10:15:14,618 | INFO     | [data] copytool_in thread has finished
[2025-04-18 06:15:29] 2025-04-18 10:15:15,189 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-18 06:15:29] 2025-04-18 10:15:15,625 | INFO     | [data] copytool_out thread has finished
[2025-04-18 06:15:29] 2025-04-18 10:15:16,195 | INFO     | [job] queue monitor thread has finished
[2025-04-18 06:15:29] 2025-04-18 10:15:18,622 | INFO     | [data] queue_monitor thread has finished
[2025-04-18 06:15:29] 2025-04-18 10:15:18,961 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140383363110720)>', '<ExcThread(monitor, started 140382549571328)>']
[2025-04-18 06:15:29] 2025-04-18 10:15:19,539 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-18 06:15:29] 2025-04-18 10:15:19,540 | INFO     | [monitor] control thread has ended
[2025-04-18 06:15:29] 2025-04-18 10:15:23,987 | INFO     | all workflow threads have been joined
[2025-04-18 06:15:29] 2025-04-18 10:15:23,987 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-18 06:15:29] 2025-04-18 10:15:23,987 | INFO     | traces error code: 0
[2025-04-18 06:15:29] 2025-04-18 10:15:23,987 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-18 06:15:29] 2025-04-18 10:15:26,020 [wrapper] ==== pilot stdout END ====
[2025-04-18 06:15:29] 2025-04-18 10:15:26,063 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-18 06:15:29] 2025-04-18 10:15:26,104 [wrapper] pilotpid: 31645
[2025-04-18 06:15:29] 2025-04-18 10:15:26,147 [wrapper] Pilot exit status: 0
[2025-04-18 06:15:29] 2025-04-18 10:15:26,393 [wrapper] pandaids: 6605310387
[2025-04-18 06:15:29] 2025-04-18 10:15:27,257 [wrapper] cleanup supervisor_pilot 32499 31646
[2025-04-18 06:15:29] 2025-04-18 10:15:27,335 [wrapper] Test setup, not cleaning
[2025-04-18 06:15:29] 2025-04-18 10:15:27,380 [wrapper] apfmon messages muted
[2025-04-18 06:15:29] 2025-04-18 10:15:27,418 [wrapper] ==== wrapper stdout END ====
[2025-04-18 06:15:29] 2025-04-18 10:15:27,455 [wrapper] ==== wrapper stderr END ====
[2025-04-18 06:15:29]  *** Error codes and diagnostics ***
[2025-04-18 06:15:29]     "exeErrorCode": 0,
[2025-04-18 06:15:29]     "exeErrorDiag": "",
[2025-04-18 06:15:29]     "pilotErrorCode": 0,
[2025-04-18 06:15:29]     "pilotErrorDiag": "",
[2025-04-18 06:15:29]  *** Listing of results directory ***
[2025-04-18 06:15:29] total 423476
[2025-04-18 06:15:29] -rw-r--r-- 1 boincer umatlas    495897 Apr 17 05:48 pilot3.tar.gz
[2025-04-18 06:15:29] -rw-r--r-- 1 boincer umatlas      5111 Apr 17 05:53 queuedata.json
[2025-04-18 06:15:29] -rwx------ 1 boincer umatlas     37140 Apr 17 05:53 runpilot2-wrapper.sh
[2025-04-18 06:15:29] -rw-r--r-- 1 boincer umatlas       100 Apr 17 12:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-18 06:15:29] -rwxr-xr-x 1 boincer umatlas      7986 Apr 17 12:20 run_atlas
[2025-04-18 06:15:29] -rw-r--r-- 1 boincer umatlas       105 Apr 17 12:20 job.xml
[2025-04-18 06:15:29] -rw-r--r-- 2 boincer umatlas 225093534 Apr 17 12:20 EVNT.44075481._002100.pool.root.1
[2025-04-18 06:15:29] -rw-r--r-- 2 boincer umatlas     17569 Apr 17 12:20 start_atlas.sh
[2025-04-18 06:15:29] drwxrwx--x 2 boincer umatlas      4096 Apr 17 12:20 shared
[2025-04-18 06:15:29] -rw-r--r-- 2 boincer umatlas    508897 Apr 17 12:20 input.tar.gz
[2025-04-18 06:15:29] -rw-r--r-- 1 boincer umatlas         0 Apr 17 12:20 boinc_lockfile
[2025-04-18 06:15:29] -rw-r--r-- 1 boincer umatlas      2578 Apr 17 12:21 pandaJob.out
[2025-04-18 06:15:29] -rw------- 1 boincer umatlas       467 Apr 17 12:21 setup.sh.local
[2025-04-18 06:15:29] -rw------- 1 boincer umatlas    990266 Apr 17 12:23 agis_schedconf.cvmfs.json
[2025-04-18 06:15:29] drwx------ 4 boincer umatlas      4096 Apr 17 12:23 pilot3
[2025-04-18 06:15:29] -rw-r--r-- 1 boincer umatlas      6227 Apr 18 06:09 init_data.xml
[2025-04-18 06:15:29] -rw------- 1 boincer umatlas 194774213 Apr 18 06:11 HITS.44075483._054016.pool.root.1
[2025-04-18 06:15:29] -rw-r--r-- 1 boincer umatlas       531 Apr 18 06:11 boinc_task_state.xml
[2025-04-18 06:15:29] -rw------- 1 boincer umatlas      1058 Apr 18 06:13 memory_monitor_summary.json
[2025-04-18 06:15:29] -rw------- 1 boincer umatlas   1618536 Apr 18 06:14 agis_ddmendpoints.agis.ALL.json
[2025-04-18 06:15:29] -rw------- 1 boincer umatlas    785654 Apr 18 06:14 log.44075483._054016.job.log.tgz.1
[2025-04-18 06:15:29] -rw------- 1 boincer umatlas      7757 Apr 18 06:15 heartbeat.json
[2025-04-18 06:15:29] -rw------- 1 boincer umatlas        95 Apr 18 06:15 pilot_heartbeat.json
[2025-04-18 06:15:29] -rw------- 1 boincer umatlas      4746 Apr 18 06:15 pilotlog.txt
[2025-04-18 06:15:29] -rw-r--r-- 1 boincer umatlas      8192 Apr 18 06:15 boinc_mmap_file
[2025-04-18 06:15:29] -rw-r--r-- 1 boincer umatlas        28 Apr 18 06:15 wrapper_checkpoint.txt
[2025-04-18 06:15:29] -rw------- 1 boincer umatlas   4167513 Apr 18 06:15 log.44075483._054016.job.log.1
[2025-04-18 06:15:29] -rw------- 1 boincer umatlas       357 Apr 18 06:15 output.list
[2025-04-18 06:15:29] -rw-r--r-- 1 boincer umatlas       620 Apr 18 06:15 runtime_log
[2025-04-18 06:15:29] -rw------- 1 boincer umatlas   4976640 Apr 18 06:15 result.tar.gz
[2025-04-18 06:15:29] -rw-r--r-- 1 boincer umatlas     11416 Apr 18 06:15 runtime_log.err
[2025-04-18 06:15:29] -rw------- 1 boincer umatlas       662 Apr 18 06:15 omuKDmV7aP7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmCccLDmHxfGEm.diag
[2025-04-18 06:15:29] -rw-r--r-- 1 boincer umatlas     20977 Apr 18 06:15 stderr.txt
[2025-04-18 06:15:29] HITS file was successfully produced:
[2025-04-18 06:15:29] -rw------- 1 boincer umatlas 194774213 Apr 18 06:11 shared/HITS.pool.root.1
[2025-04-18 06:15:29]  *** Contents of shared directory: ***
[2025-04-18 06:15:29] total 415416
[2025-04-18 06:15:29] -rw-r--r-- 2 boincer umatlas 225093534 Apr 17 12:20 ATLAS.root_0
[2025-04-18 06:15:29] -rw-r--r-- 2 boincer umatlas     17569 Apr 17 12:20 start_atlas.sh
[2025-04-18 06:15:29] -rw-r--r-- 2 boincer umatlas    508897 Apr 17 12:20 input.tar.gz
[2025-04-18 06:15:29] -rw------- 1 boincer umatlas 194774213 Apr 18 06:11 HITS.pool.root.1
[2025-04-18 06:15:29] -rw------- 1 boincer umatlas   4976640 Apr 18 06:15 result.tar.gz
06:15:31 (39803): run_atlas exited; CPU time 59220.023287
06:15:31 (39803): called boinc_finish(0)

</stderr_txt>
]]>

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