Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:17:42 (761398): wrapper (7.7.26015): starting
22:17:42 (761398): wrapper: running run_atlas (--nthreads 12)
[2025-04-17 22:17:42] Arguments: --nthreads 12
[2025-04-17 22:17:42] Threads: 12
[2025-04-17 22:17:42] Checking for CVMFS
[2025-04-17 22:17:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-17 22:17:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-17 22:17:43] Running cvmfs_config stat atlas.cern.ch
[2025-04-17 22:17:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-17 22:17:43] 2.12.7.0 2534634 18072 256736 144977 3 57 29189826 46080001 6410 130560 0 180519240 99.929 36611362 4456 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2025-04-17 22:17:43] CVMFS is ok
[2025-04-17 22:17:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-17 22:17:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-17 22:17:43] Further information can be found at the LHC@home message board.
[2025-04-17 22:17:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-17 22:17:43] Checking for apptainer binary...
[2025-04-17 22:17:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-17 22:17:43] Running /usr/bin/apptainer --version
[2025-04-17 22:17:43] apptainer version 1.4.0-1.el9
[2025-04-17 22:17:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-17 22:17:44] mff2103.farm.particle.cz
[2025-04-17 22:17:44] apptainer works
[2025-04-17 22:17:44] Set ATHENA_PROC_NUMBER=12
[2025-04-17 22:17:44] Set ATHENA_CORE_NUMBER=12
[2025-04-17 22:17:44] Starting ATLAS job with PandaID=6605179537
[2025-04-17 22:17:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-17 23:26:16]  *** The last 200 lines of the pilot log: ***
[2025-04-17 23:26:16] 2025-04-17 21:25:34,937 | INFO     | stage-out finished correctly
[2025-04-17 23:26:16] 2025-04-17 21:25:36,179 | WARNING  | process 851269 can no longer be monitored (due to stat problems) - aborting
[2025-04-17 23:26:16] 2025-04-17 21:25:36,179 | INFO     | using path: /scratch/.boinc/slots/1/PanDA_Pilot-6605179537/memory_monitor_summary.json (trf name=prmon)
[2025-04-17 23:26:16] 2025-04-17 21:25:36,181 | INFO     | using path: /scratch/.boinc/slots/1/PanDA_Pilot-6605179537/memory_monitor_summary.json (trf name=prmon)
[2025-04-17 23:26:16] 2025-04-17 21:25:36,182 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 3719719 B
[2025-04-17 23:26:16] 2025-04-17 21:25:36,183 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15536 B
[2025-04-17 23:26:16] 2025-04-17 21:25:36,183 | INFO     | executing command: df -mP /scratch/.boinc/slots/1
[2025-04-17 23:26:16] 2025-04-17 21:25:36,307 | INFO     | sufficient remaining disk space (1677862109184 B)
[2025-04-17 23:26:16] 2025-04-17 21:25:36,307 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-04-17 23:26:16] 2025-04-17 21:25:36,308 | INFO     | size of work directory /scratch/.boinc/slots/1/PanDA_Pilot-6605179537: 4012508 B (within 2537553920 B limit)
[2025-04-17 23:26:16] 2025-04-17 21:25:36,308 | INFO     | pfn file=/scratch/.boinc/slots/1/PanDA_Pilot-6605179537/HITS.44075483._052890.pool.root.1 does not exist (skip from workdir size calculation)
[2025-04-17 23:26:16] 2025-04-17 21:25:36,308 | INFO     | total size of present files: 0 B (workdir size: 4012508 B)
[2025-04-17 23:26:16] 2025-04-17 21:25:36,308 | INFO     | output file size check: skipping output file /scratch/.boinc/slots/1/PanDA_Pilot-6605179537/HITS.44075483._052890.pool.root.1 since it does not exist
[2025-04-17 23:26:16] 2025-04-17 21:25:37,096 | INFO     | number of running child processes to parent process 851269: 1
[2025-04-17 23:26:16] 2025-04-17 21:25:37,096 | INFO     | maximum number of monitored processes: 6
[2025-04-17 23:26:16] 2025-04-17 21:25:37,841 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-17 23:26:16] 2025-04-17 21:25:38,034 | INFO     | job 6605179537 has state=finished
[2025-04-17 23:26:16] 2025-04-17 21:25:38,034 | INFO     | preparing for final server update for job 6605179537 in state='finished'
[2025-04-17 23:26:16] 2025-04-17 21:25:38,035 | INFO     | this job has now completed (state=finished)
[2025-04-17 23:26:16] 2025-04-17 21:25:38,035 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-17 23:26:16] 2025-04-17 21:25:38,035 | INFO     | log transfer has been attempted: DONE
[2025-04-17 23:26:16] 2025-04-17 21:25:38,035 | INFO     | job 6605179537 has finished - writing final server update
[2025-04-17 23:26:16] 2025-04-17 21:25:38,035 | INFO     | total number of processed events: 400 (read)
[2025-04-17 23:26:16] 2025-04-17 21:25:38,053 | INFO     | executing command: lscpu
[2025-04-17 23:26:16] 2025-04-17 21:25:38,157 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-17 23:26:16] 2025-04-17 21:25:39,601 | INFO     | monitor loop #282: job 0:6605179537 is in state 'finished'
[2025-04-17 23:26:16] 2025-04-17 21:25:39,602 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-17 23:26:16] 2025-04-17 21:25:42,105 | INFO     | monitor loop #283: job 0:6605179537 is in state 'finished'
[2025-04-17 23:26:16] 2025-04-17 21:25:42,106 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-17 23:26:16] 2025-04-17 21:25:44,609 | INFO     | monitor loop #284: job 0:6605179537 is in state 'finished'
[2025-04-17 23:26:16] 2025-04-17 21:25:44,610 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-17 23:26:16] 2025-04-17 21:25:47,115 | INFO     | monitor loop #285: job 0:6605179537 is in state 'finished'
[2025-04-17 23:26:16] 2025-04-17 21:25:47,115 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-17 23:26:16] 2025-04-17 21:25:49,618 | INFO     | monitor loop #286: job 0:6605179537 is in state 'finished'
[2025-04-17 23:26:16] 2025-04-17 21:25:49,619 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-17 23:26:16] 2025-04-17 21:25:52,124 | INFO     | monitor loop #287: job 0:6605179537 is in state 'finished'
[2025-04-17 23:26:16] 2025-04-17 21:25:52,124 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-17 23:26:16] 2025-04-17 21:25:53,572 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-17 23:26:16] 2025-04-17 21:25:53,572 | INFO     | using path: /scratch/.boinc/slots/1/PanDA_Pilot-6605179537/memory_monitor_summary.json (trf name=prmon)
[2025-04-17 23:26:16] 2025-04-17 21:25:53,573 | INFO     | extracted standard info from prmon json
[2025-04-17 23:26:16] 2025-04-17 21:25:53,573 | INFO     | extracted standard memory fields from prmon json
[2025-04-17 23:26:16] 2025-04-17 21:25:53,573 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-17 23:26:16] 2025-04-17 21:25:53,574 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-17 23:26:16] 2025-04-17 21:25:53,574 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-17 23:26:16] 2025-04-17 21:25:53,576 | INFO     | fitting pss+swap vs Time
[2025-04-17 23:26:16] 2025-04-17 21:25:53,577 | INFO     | sum of square deviations: 63666310.0
[2025-04-17 23:26:16] 2025-04-17 21:25:53,577 | INFO     | sum of deviations: 14869542085.0
[2025-04-17 23:26:16] 2025-04-17 21:25:53,577 | INFO     | mean x: 1744923210.0
[2025-04-17 23:26:16] 2025-04-17 21:25:53,577 | INFO     | mean y: 2575421.0508474577
[2025-04-17 23:26:16] 2025-04-17 21:25:53,577 | INFO     | -- intersect: -407531787826.7688
[2025-04-17 23:26:16] 2025-04-17 21:25:53,577 | INFO     | intersect: -407531787826.7688
[2025-04-17 23:26:16] 2025-04-17 21:25:53,577 | INFO     | chi2: 1.6454165115071873
[2025-04-17 23:26:16] 2025-04-17 21:25:53,577 | INFO     | -- intersect: -407531787826.7688
[2025-04-17 23:26:16] 2025-04-17 21:25:53,578 | INFO     | current memory leak: 233.55 B/s (using 59 data points, chi2=1.65)
[2025-04-17 23:26:16] 2025-04-17 21:25:53,578 | INFO     | ..............................
[2025-04-17 23:26:16] 2025-04-17 21:25:53,578 | INFO     | . Timing measurements:
[2025-04-17 23:26:16] 2025-04-17 21:25:53,578 | INFO     | . get job = 0 s
[2025-04-17 23:26:16] 2025-04-17 21:25:53,578 | INFO     | . initial setup = 21 s
[2025-04-17 23:26:16] 2025-04-17 21:25:53,578 | INFO     | . payload setup = 9 s
[2025-04-17 23:26:16] 2025-04-17 21:25:53,578 | INFO     | . stage-in = 0 s
[2025-04-17 23:26:16] 2025-04-17 21:25:53,578 | INFO     | . payload execution = 4000 s
[2025-04-17 23:26:16] 2025-04-17 21:25:53,579 | INFO     | . stage-out = 1 s
[2025-04-17 23:26:16] 2025-04-17 21:25:53,579 | INFO     | . log creation = 0 s
[2025-04-17 23:26:16] 2025-04-17 21:25:53,579 | INFO     | ..............................
[2025-04-17 23:26:16] 2025-04-17 21:25:53,682 | INFO     | 
[2025-04-17 23:26:16] 2025-04-17 21:25:53,683 | INFO     | job summary report
[2025-04-17 23:26:16] 2025-04-17 21:25:53,683 | INFO     | --------------------------------------------------
[2025-04-17 23:26:16] 2025-04-17 21:25:53,683 | INFO     | PanDA job id: 6605179537
[2025-04-17 23:26:16] 2025-04-17 21:25:53,683 | INFO     | task id: 44075483
[2025-04-17 23:26:16] 2025-04-17 21:25:53,683 | INFO     | errors: (none)
[2025-04-17 23:26:16] 2025-04-17 21:25:53,683 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-17 23:26:16] 2025-04-17 21:25:53,683 | INFO     | pilot state: finished 
[2025-04-17 23:26:16] 2025-04-17 21:25:53,683 | INFO     | transexitcode: 0
[2025-04-17 23:26:16] 2025-04-17 21:25:53,683 | INFO     | exeerrorcode: 0
[2025-04-17 23:26:16] 2025-04-17 21:25:53,684 | INFO     | exeerrordiag: 
[2025-04-17 23:26:16] 2025-04-17 21:25:53,685 | INFO     | exitcode: 0
[2025-04-17 23:26:16] 2025-04-17 21:25:53,685 | INFO     | exitmsg: OK
[2025-04-17 23:26:16] 2025-04-17 21:25:53,685 | INFO     | cpuconsumptiontime: 34181 s
[2025-04-17 23:26:16] 2025-04-17 21:25:53,685 | INFO     | nevents: 400
[2025-04-17 23:26:16] 2025-04-17 21:25:53,685 | INFO     | neventsw: 0
[2025-04-17 23:26:16] 2025-04-17 21:25:53,685 | INFO     | pid: 851269
[2025-04-17 23:26:16] 2025-04-17 21:25:53,685 | INFO     | pgrp: 851269
[2025-04-17 23:26:16] 2025-04-17 21:25:53,685 | INFO     | corecount: 12
[2025-04-17 23:26:16] 2025-04-17 21:25:53,685 | INFO     | event service: False
[2025-04-17 23:26:16] 2025-04-17 21:25:53,685 | INFO     | sizes: {0: 2426597, 1: 2426796, 8: 2427002, 11: 2427030, 4014: 2452727, 4016: 2461670, 4019: 2461882, 4035: 2462052}
[2025-04-17 23:26:16] 2025-04-17 21:25:53,685 | INFO     | --------------------------------------------------
[2025-04-17 23:26:16] 2025-04-17 21:25:53,686 | INFO     | 
[2025-04-17 23:26:16] 2025-04-17 21:25:53,686 | INFO     | executing command: ls -lF /scratch/.boinc/slots/1
[2025-04-17 23:26:16] 2025-04-17 21:25:53,714 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-17 23:26:16] 2025-04-17 21:25:53,714 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-17 23:26:16] 2025-04-17 21:25:53,714 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-17 23:26:16] 2025-04-17 21:25:53,714 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-17 23:26:16] 2025-04-17 21:25:53,714 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-17 23:26:16] 2025-04-17 21:25:53,714 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-17 23:26:16] 2025-04-17 21:25:53,714 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-17 23:26:16] 2025-04-17 21:25:53,714 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-17 23:26:16] 2025-04-17 21:25:53,715 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-17 23:26:16] 2025-04-17 21:25:53,715 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-17 23:26:16] 2025-04-17 21:25:53,715 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-17 23:26:16] 2025-04-17 21:25:53,715 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-17 23:26:16] 2025-04-17 21:25:53,715 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-17 23:26:16] 2025-04-17 21:25:53,715 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-17 23:26:16] 2025-04-17 21:25:53,715 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-17 23:26:16] 2025-04-17 21:25:53,715 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-17 23:26:16] 2025-04-17 21:25:53,715 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-17 23:26:16] 2025-04-17 21:25:53,715 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-17 23:26:16] 2025-04-17 21:25:53,715 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-17 23:26:16] 2025-04-17 21:25:53,715 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-17 23:26:16] 2025-04-17 21:25:53,715 | INFO     | job 6605179537 has completed (purged errors)
[2025-04-17 23:26:16] 2025-04-17 21:25:53,716 | INFO     | overall cleanup function is called
[2025-04-17 23:26:16] 2025-04-17 21:25:54,725 | INFO     | --- collectZombieJob: --- 10, [851269]
[2025-04-17 23:26:16] 2025-04-17 21:25:54,726 | INFO     | zombie collector waiting for pid 851269
[2025-04-17 23:26:16] 2025-04-17 21:25:54,726 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-17 23:26:16] 2025-04-17 21:25:54,726 | INFO     | collected zombie processes
[2025-04-17 23:26:16] 2025-04-17 21:25:54,726 | INFO     | will attempt to kill all subprocesses of pid=851269
[2025-04-17 23:26:16] 2025-04-17 21:25:55,404 | INFO     | process IDs to be killed: [851269] (in reverse order)
[2025-04-17 23:26:16] 2025-04-17 21:25:55,570 | WARNING  | found no corresponding commands to process id(s)
[2025-04-17 23:26:16] 2025-04-17 21:25:55,571 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-17 23:26:16] 2025-04-17 21:25:55,631 | INFO     | did not find any defunct processes belonging to 851269
[2025-04-17 23:26:16] 2025-04-17 21:25:55,662 | INFO     | did not find any defunct processes belonging to 851269
[2025-04-17 23:26:16] 2025-04-17 21:25:55,663 | INFO     | ready for new job
[2025-04-17 23:26:16] 2025-04-17 21:25:55,663 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-17 23:26:16] 2025-04-17 21:25:55,664 | INFO     | **************************************
[2025-04-17 23:26:16] 2025-04-17 21:25:55,665 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-17 23:26:16] 2025-04-17 21:25:55,665 | INFO     | **************************************
[2025-04-17 23:26:16] 2025-04-17 21:25:55,665 | INFO     | 
[2025-04-17 23:26:16] 2025-04-17 21:25:55,678 | INFO     | architecture information:
[2025-04-17 23:26:16] 2025-04-17 21:25:55,678 | INFO     | executing command: cat /etc/os-release
[2025-04-17 23:26:16] 2025-04-17 21:25:55,701 | INFO     | cat /etc/os-release:
[2025-04-17 23:26:16] NAME="CentOS Linux"
[2025-04-17 23:26:16] VERSION="7 (Core)"
[2025-04-17 23:26:16] ID="centos"
[2025-04-17 23:26:16] ID_LIKE="rhel fedora"
[2025-04-17 23:26:16] VERSION_ID="7"
[2025-04-17 23:26:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-17 23:26:16] ANSI_COLOR="0;31"
[2025-04-17 23:26:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-17 23:26:16] HOME_URL="https://www.centos.org/"
[2025-04-17 23:26:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-17 23:26:16] 
[2025-04-17 23:26:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-17 23:26:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-17 23:26:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-17 23:26:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-17 23:26:16] 
[2025-04-17 23:26:16] 2025-04-17 21:25:55,701 | INFO     | **************************************
[2025-04-17 23:26:16] 2025-04-17 21:25:56,185 | INFO     | PID=775198 has CPU usage=15.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-04-17 23:26:16] 2025-04-17 21:25:56,185 | INFO     | .. there are 8 such processes running
[2025-04-17 23:26:16] 2025-04-17 21:25:56,204 | INFO     | executing command: df -mP /scratch/.boinc/slots/1
[2025-04-17 23:26:16] 2025-04-17 21:25:56,234 | INFO     | sufficient remaining disk space (1677785563136 B)
[2025-04-17 23:26:16] 2025-04-17 21:25:56,234 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-17 23:26:16] 2025-04-17 21:25:56,235 | INFO     | current server update state: UPDATING_FINAL
[2025-04-17 23:26:16] 2025-04-17 21:25:56,235 | INFO     | update_server=False
[2025-04-17 23:26:16] 2025-04-17 21:25:56,235 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-17 23:26:16] 2025-04-17 21:25:56,235 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-17 23:26:16] 2025-04-17 21:25:56,235 | INFO     | aborting loop
[2025-04-17 23:26:16] 2025-04-17 21:25:56,235 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-17 23:26:16] 2025-04-17 21:25:56,236 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-17 23:26:16] 2025-04-17 21:25:56,236 | INFO     | found 0 job(s) in 20 queues
[2025-04-17 23:26:16] 2025-04-17 21:25:56,236 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-17 23:26:16] 2025-04-17 21:25:56,236 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-17 23:26:16] 2025-04-17 21:25:57,063 | INFO     | all data control threads have been joined
[2025-04-17 23:26:16] 2025-04-17 21:25:57,240 | INFO     | [job] retrieve thread has finished
[2025-04-17 23:26:16] 2025-04-17 21:25:57,241 | INFO     | [job] job monitor thread has finished
[2025-04-17 23:26:16] 2025-04-17 21:25:57,387 | INFO     | all payload control threads have been joined
[2025-04-17 23:26:16] 2025-04-17 21:25:57,568 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-17 23:26:16] 2025-04-17 21:25:57,689 | INFO     | all job control threads have been joined
[2025-04-17 23:26:16] 2025-04-17 21:25:57,757 | INFO     | [payload] failed_post thread has finished
[2025-04-17 23:26:16] 2025-04-17 21:25:57,881 | INFO     | [payload] execute_payloads thread has finished
[2025-04-17 23:26:16] 2025-04-17 21:25:58,013 | INFO     | [job] validate thread has finished
[2025-04-17 23:26:16] 2025-04-17 21:25:58,068 | INFO     | [data] control thread has finished
[2025-04-17 23:26:16] 2025-04-17 21:25:58,127 | INFO     | [data] copytool_in thread has finished
[2025-04-17 23:26:16] 2025-04-17 21:25:58,242 | INFO     | [data] copytool_out thread has finished
[2025-04-17 23:26:16] 2025-04-17 21:25:58,393 | INFO     | [payload] control thread has finished
[2025-04-17 23:26:16] 2025-04-17 21:25:58,402 | INFO     | [payload] validate_pre thread has finished
[2025-04-17 23:26:16] 2025-04-17 21:25:58,406 | INFO     | [job] create_data_payload thread has finished
[2025-04-17 23:26:16] 2025-04-17 21:25:58,510 | INFO     | [payload] validate_post thread has finished
[2025-04-17 23:26:16] 2025-04-17 21:25:58,693 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-17 23:26:16] 2025-04-17 21:25:58,695 | INFO     | [job] control thread has finished
[2025-04-17 23:26:16] 2025-04-17 21:25:59,699 | INFO     | [job] queue monitor thread has finished
[2025-04-17 23:26:16] 2025-04-17 21:26:01,575 | INFO     | [data] queue_monitor thread has finished
[2025-04-17 23:26:16] 2025-04-17 21:26:07,059 | INFO     | job.realtimelogging is not enabled
[2025-04-17 23:26:16] 2025-04-17 21:26:08,064 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-17 23:26:16] 2025-04-17 21:26:09,939 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140108504782656)>', '<ExcThread(monitor, started 140107705202432)>']
[2025-04-17 23:26:16] 2025-04-17 21:26:10,319 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-17 23:26:16] 2025-04-17 21:26:10,320 | INFO     | [monitor] control thread has ended
[2025-04-17 23:26:16] 2025-04-17 21:26:14,965 | INFO     | all workflow threads have been joined
[2025-04-17 23:26:16] 2025-04-17 21:26:14,966 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-17 23:26:16] 2025-04-17 21:26:14,966 | INFO     | traces error code: 0
[2025-04-17 23:26:16] 2025-04-17 21:26:14,966 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-17 23:26:16] 2025-04-17 21:26:15,223 [wrapper] ==== pilot stdout END ====
[2025-04-17 23:26:16] 2025-04-17 21:26:15,259 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-17 23:26:16] 2025-04-17 21:26:15,297 [wrapper] pilotpid: 775198
[2025-04-17 23:26:16] 2025-04-17 21:26:15,317 [wrapper] Pilot exit status: 0
[2025-04-17 23:26:16] 2025-04-17 21:26:15,353 [wrapper] pandaids: 6605179537
[2025-04-17 23:26:16] 2025-04-17 21:26:15,463 [wrapper] cleanup supervisor_pilot 3905297 775199
[2025-04-17 23:26:16] 2025-04-17 21:26:15,470 [wrapper] Test setup, not cleaning
[2025-04-17 23:26:16] 2025-04-17 21:26:15,475 [wrapper] apfmon messages muted
[2025-04-17 23:26:16] 2025-04-17 21:26:15,479 [wrapper] ==== wrapper stdout END ====
[2025-04-17 23:26:16] 2025-04-17 21:26:15,483 [wrapper] ==== wrapper stderr END ====
[2025-04-17 23:26:16]  *** Error codes and diagnostics ***
[2025-04-17 23:26:16]     "exeErrorCode": 0,
[2025-04-17 23:26:16]     "exeErrorDiag": "",
[2025-04-17 23:26:16]     "pilotErrorCode": 0,
[2025-04-17 23:26:16]     "pilotErrorDiag": "",
[2025-04-17 23:26:16]  *** Listing of results directory ***
[2025-04-17 23:26:16] total 406760
[2025-04-17 23:26:16] -rw-r--r-- 1 boinc boinc    495897 Apr 17 10:07 pilot3.tar.gz
[2025-04-17 23:26:16] -rw-r--r-- 1 boinc boinc      5111 Apr 17 10:15 queuedata.json
[2025-04-17 23:26:16] -rwx------ 1 boinc boinc     37140 Apr 17 10:16 runpilot2-wrapper.sh
[2025-04-17 23:26:16] -rw-r--r-- 1 boinc boinc       100 Apr 17 22:17 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-17 23:26:16] -rwxr-xr-x 1 boinc boinc      7986 Apr 17 22:17 run_atlas
[2025-04-17 23:26:16] -rw-r--r-- 1 boinc boinc       105 Apr 17 22:17 job.xml
[2025-04-17 23:26:16] -rw-r--r-- 2 boinc boinc 222914664 Apr 17 22:17 EVNT.44075481._002062.pool.root.1
[2025-04-17 23:26:16] -rw-r--r-- 1 boinc boinc      6654 Apr 17 22:17 init_data.xml
[2025-04-17 23:26:16] -rw-r--r-- 2 boinc boinc     17569 Apr 17 22:17 start_atlas.sh
[2025-04-17 23:26:16] drwxrwx--x 2 boinc boinc      4096 Apr 17 22:17 shared
[2025-04-17 23:26:16] -rw-r--r-- 2 boinc boinc    508880 Apr 17 22:17 input.tar.gz
[2025-04-17 23:26:16] -rw-r--r-- 1 boinc boinc         0 Apr 17 22:17 boinc_lockfile
[2025-04-17 23:26:16] -rw-r--r-- 1 boinc boinc      2575 Apr 17 22:17 pandaJob.out
[2025-04-17 23:26:16] -rw------- 1 boinc boinc       424 Apr 17 22:17 setup.sh.local
[2025-04-17 23:26:16] -rw------- 1 boinc boinc    990274 Apr 17 22:18 agis_schedconf.cvmfs.json
[2025-04-17 23:26:16] -rw------- 1 boinc boinc   1618536 Apr 17 22:18 agis_ddmendpoints.agis.ALL.json
[2025-04-17 23:26:16] drwx------ 4 boinc boinc      4096 Apr 17 22:18 pilot3
[2025-04-17 23:26:16] -rw------- 1 boinc boinc 188262165 Apr 17 23:24 HITS.44075483._052890.pool.root.1
[2025-04-17 23:26:16] -rw-r--r-- 1 boinc boinc       529 Apr 17 23:24 boinc_task_state.xml
[2025-04-17 23:26:16] -rw------- 1 boinc boinc        95 Apr 17 23:25 pilot_heartbeat.json
[2025-04-17 23:26:16] -rw------- 1 boinc boinc      1025 Apr 17 23:25 memory_monitor_summary.json
[2025-04-17 23:26:16] -rw------- 1 boinc boinc    341854 Apr 17 23:25 log.44075483._052890.job.log.tgz.1
[2025-04-17 23:26:16] -rw------- 1 boinc boinc      7690 Apr 17 23:25 heartbeat.json
[2025-04-17 23:26:16] -rw-r--r-- 1 boinc boinc        27 Apr 17 23:26 wrapper_checkpoint.txt
[2025-04-17 23:26:16] -rw-r--r-- 1 boinc boinc      8192 Apr 17 23:26 boinc_mmap_file
[2025-04-17 23:26:16] -rw------- 1 boinc boinc      4945 Apr 17 23:26 pilotlog.txt
[2025-04-17 23:26:16] -rw------- 1 boinc boinc    398319 Apr 17 23:26 log.44075483._052890.job.log.1
[2025-04-17 23:26:16] -rw------- 1 boinc boinc       357 Apr 17 23:26 output.list
[2025-04-17 23:26:16] -rw-r--r-- 1 boinc boinc       620 Apr 17 23:26 runtime_log
[2025-04-17 23:26:16] -rw------- 1 boinc boinc    757760 Apr 17 23:26 result.tar.gz
[2025-04-17 23:26:16] -rw------- 1 boinc boinc       663 Apr 17 23:26 XKjLDmVbZP7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmVRcLDmc5O5Em.diag
[2025-04-17 23:26:16] -rw-r--r-- 1 boinc boinc     11078 Apr 17 23:26 runtime_log.err
[2025-04-17 23:26:16] -rw-r--r-- 1 boinc boinc     22493 Apr 17 23:26 stderr.txt
[2025-04-17 23:26:16] HITS file was successfully produced:
[2025-04-17 23:26:16] -rw------- 1 boinc boinc 188262165 Apr 17 23:24 shared/HITS.pool.root.1
[2025-04-17 23:26:16]  *** Contents of shared directory: ***
[2025-04-17 23:26:16] total 402812
[2025-04-17 23:26:16] -rw-r--r-- 2 boinc boinc 222914664 Apr 17 22:17 ATLAS.root_0
[2025-04-17 23:26:16] -rw-r--r-- 2 boinc boinc     17569 Apr 17 22:17 start_atlas.sh
[2025-04-17 23:26:16] -rw-r--r-- 2 boinc boinc    508880 Apr 17 22:17 input.tar.gz
[2025-04-17 23:26:16] -rw------- 1 boinc boinc 188262165 Apr 17 23:24 HITS.pool.root.1
[2025-04-17 23:26:16] -rw------- 1 boinc boinc    757760 Apr 17 23:26 result.tar.gz
23:26:18 (761398): run_atlas exited; CPU time 34279.591054
23:26:18 (761398): called boinc_finish(0)

</stderr_txt>
]]>

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