Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-04-17 14:50:17 (38252): Detected: vboxwrapper 26206
2025-04-17 14:50:17 (38252): Detected: BOINC client v8.0.2
2025-04-17 14:50:18 (38252): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2025-04-17 14:50:18 (38252): Successfully copied 'init_data.xml' to the shared directory.
2025-04-17 14:50:19 (38252): Create VM. (boinc_b2958e32905c5b8b, slot#12)
2025-04-17 14:50:19 (38252): Setting Memory Size for VM. (4800MB)
2025-04-17 14:50:20 (38252): Setting CPU Count for VM. (8)
2025-04-17 14:50:20 (38252): Setting Chipset Options for VM.
2025-04-17 14:50:20 (38252): Setting Graphics Controller Options for VM.
2025-04-17 14:50:20 (38252): Setting Boot Options for VM.
2025-04-17 14:50:21 (38252): Setting Network Configuration for NAT.
2025-04-17 14:50:21 (38252): Enabling VM Network Access.
2025-04-17 14:50:21 (38252): Disabling USB Support for VM.
2025-04-17 14:50:21 (38252): Disabling COM Port Support for VM.
2025-04-17 14:50:22 (38252): Disabling LPT Port Support for VM.
2025-04-17 14:50:22 (38252): Disabling Audio Support for VM.
2025-04-17 14:50:22 (38252): Disabling Clipboard Support for VM.
2025-04-17 14:50:22 (38252): Disabling Drag and Drop Support for VM.
2025-04-17 14:50:23 (38252): Adding storage controller(s) to VM.
2025-04-17 14:50:23 (38252): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-04-17 14:50:26 (38252): Adding VirtualBox Guest Additions to VM.
2025-04-17 14:50:26 (38252): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-04-17 14:50:26 (38252): forwarding host port 52812 to guest port 80
2025-04-17 14:50:27 (38252): Enabling remote desktop for VM.
2025-04-17 14:50:27 (38252): Required extension pack not installed, remote desktop not enabled.
2025-04-17 14:50:27 (38252): Enabling shared directory for VM.
2025-04-17 14:50:27 (38252): Starting VM using VBoxManage interface. (boinc_b2958e32905c5b8b, slot#12)
2025-04-17 14:50:32 (38252): Successfully started VM. (PID = '37196')
2025-04-17 14:50:32 (38252): Reporting VM Process ID to BOINC.
2025-04-17 14:50:32 (38252): Guest Log: BIOS: VirtualBox 7.0.6
2025-04-17 14:50:32 (38252): Guest Log: CPUID EDX: 0x178bfbff
2025-04-17 14:50:32 (38252): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-04-17 14:50:32 (38252): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-04-17 14:50:32 (38252): VM state change detected. (old = 'poweredoff', new = 'running')
2025-04-17 14:50:32 (38252): Detected: Web Application Enabled (http://localhost:52812)
2025-04-17 14:50:32 (38252): Preference change detected
2025-04-17 14:50:32 (38252): Setting CPU throttle for VM. (100%)
2025-04-17 14:50:32 (38252): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-17 14:50:34 (38252): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-04-17 14:50:34 (38252): Guest Log: BIOS: Booting from Hard Disk...
2025-04-17 14:50:37 (38252): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-04-17 14:50:37 (38252): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-04-17 14:50:37 (38252): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-04-17 14:50:37 (38252): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-04-17 14:50:37 (38252): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-04-17 14:50:37 (38252): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-04-17 14:50:37 (38252): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-04-17 14:50:37 (38252): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-04-17 14:50:37 (38252): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-04-17 14:50:37 (38252): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-04-17 14:50:37 (38252): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-04-17 14:50:37 (38252): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-04-17 14:50:37 (38252): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-04-17 14:50:37 (38252): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-04-17 14:50:37 (38252): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-04-17 14:50:37 (38252): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-04-17 14:50:37 (38252): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-04-17 14:50:37 (38252): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-04-17 14:50:37 (38252): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-04-17 14:50:37 (38252): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-04-17 14:50:37 (38252): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-04-17 14:50:37 (38252): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-04-17 14:50:37 (38252): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-04-17 14:50:37 (38252): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-04-17 14:50:37 (38252): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-04-17 14:50:37 (38252): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-04-17 14:50:37 (38252): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-04-17 14:50:37 (38252): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-04-17 14:50:37 (38252): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-04-17 14:50:37 (38252): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-04-17 14:50:37 (38252): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-04-17 14:50:37 (38252): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-04-17 14:50:43 (38252): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-04-17 14:50:43 (38252): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-04-17 14:50:47 (38252): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-04-17 14:50:47 (38252): Guest Log: 00:00:00.000101 main     Log opened 2025-04-17T14:50:45.854278000Z
2025-04-17 14:50:47 (38252): Guest Log: 00:00:00.000184 main     OS Product: Linux
2025-04-17 14:50:47 (38252): Guest Log: 00:00:00.000217 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-04-17 14:50:47 (38252): Guest Log: 00:00:00.000243 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-04-17 14:50:47 (38252): Guest Log: 00:00:00.000265 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-04-17 14:50:47 (38252): Guest Log: 00:00:00.000265 main     Process ID: 1367
2025-04-17 14:50:47 (38252): Guest Log: 00:00:00.000266 main     Package type: LINUX_64BITS_GENERIC
2025-04-17 14:50:47 (38252): Guest Log: 00:00:00.000873 main     5.2.32 r132073 started. Verbose level = 0
2025-04-17 14:50:47 (38252): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-04-17 14:50:47 (38252): Guest Log: [INFO] Mounting shared directory
2025-04-17 14:50:47 (38252): Guest Log: [INFO] Checking for init_data.xml
2025-04-17 14:50:50 (38252): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-04-17 14:50:50 (38252): Guest Log: [INFO] Detected branch: prod
2025-04-17 14:50:51 (38252): Guest Log: This is the prod version of the ATLAS job wrapper
2025-04-17 14:50:51 (38252): Guest Log: Copying input files
2025-04-17 14:50:52 (38252): Guest Log: Copied input files into RunAtlas.
2025-04-17 14:50:52 (38252): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-04-17 14:50:52 (38252): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-04-17 14:50:52 (38252): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-04-17 14:50:52 (38252): Guest Log: Further information can be found at the LHC@home message board.
2025-04-17 14:50:57 (38252): Guest Log: 00:00:10.003456 timesync vgsvcTimeSyncWorker: Radical guest time change: 18 010 949 578 000ns (GuestNow=1 744 919 456 805 745 000 ns GuestLast=1 744 901 445 856 167 000 ns fSetTimeLastLoop=true )
2025-04-17 14:51:00 (38252): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-04-17 14:51:00 (38252): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-04-17 14:51:00 (38252): Guest Log: 2.6.3.0 1648 0 32168 144976 4 1 3117322 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-04-17 14:51:01 (38252): Guest Log: copied the webapp to /var/www
2025-04-17 14:51:01 (38252): Guest Log: ATHENA_PROC_NUMBER=8
2025-04-17 14:51:01 (38252): Guest Log: ATHENA_CORE_NUMBER=8
2025-04-17 14:51:01 (38252): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-04-17 14:51:01 (38252): Guest Log:  *** Starting ATLAS job. (PandaID=6605315199 taskID=44075483) ***
2025-04-17 15:03:49 (38252): VM state change detected. (old = 'running', new = 'paused')
2025-04-17 15:04:09 (38252): VM state change detected. (old = 'paused', new = 'running')
2025-04-17 15:09:32 (38252): VM state change detected. (old = 'running', new = 'paused')
2025-04-17 15:09:52 (38252): VM state change detected. (old = 'paused', new = 'running')
2025-04-17 15:22:54 (38252): VM state change detected. (old = 'running', new = 'paused')
2025-04-17 15:23:14 (38252): VM state change detected. (old = 'paused', new = 'running')
2025-04-17 15:25:04 (38252): VM state change detected. (old = 'running', new = 'paused')
2025-04-17 15:25:24 (38252): VM state change detected. (old = 'paused', new = 'running')
2025-04-17 15:46:38 (38252): VM state change detected. (old = 'running', new = 'paused')
2025-04-17 15:46:58 (38252): VM state change detected. (old = 'paused', new = 'running')
2025-04-17 15:59:10 (38252): VM state change detected. (old = 'running', new = 'paused')
2025-04-17 15:59:30 (38252): VM state change detected. (old = 'paused', new = 'running')
2025-04-17 15:59:42 (38252): VM state change detected. (old = 'running', new = 'paused')
2025-04-17 16:00:02 (38252): VM state change detected. (old = 'paused', new = 'running')
2025-04-17 16:08:34 (38252): Guest Log:  *** Job finished ***
2025-04-17 16:08:34 (38252): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-17 16:08:34 (38252): Guest Log: 2025-04-17 21:06:03,000 | INFO     | [data] queue_monitor thread has finished
2025-04-17 16:08:34 (38252): Guest Log: 2025-04-17 21:06:06,095 | INFO     | job.realtimelogging is not enabled
2025-04-17 16:08:34 (38252): Guest Log: 2025-04-17 21:06:07,097 | INFO     | [payload] run_realtimelog thread has finished
2025-04-17 16:08:34 (38252): Guest Log: 2025-04-17 21:06:08,011 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140710782728000)>', '<ExcThread(monitor, started 140709814322944)>']
2025-04-17 16:08:34 (38252): Guest Log: 2025-04-17 21:06:09,013 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-17 16:08:34 (38252): Guest Log: 2025-04-17 21:06:09,013 | INFO     | [monitor] control thread has ended
2025-04-17 16:08:34 (38252): Guest Log: 2025-04-17 21:06:13,016 | INFO     | all workflow threads have been joined
2025-04-17 16:08:34 (38252): Guest Log: 2025-04-17 21:06:13,017 | INFO     | end of generic workflow (traces error code: 0)
2025-04-17 16:08:34 (38252): Guest Log: 2025-04-17 21:06:13,017 | INFO     | traces error code: 0
2025-04-17 16:08:34 (38252): Guest Log: 2025-04-17 21:06:13,017 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-17 16:08:34 (38252): Guest Log: 2025-04-17 21:06:13,574 [wrapper] ==== pilot stdout END ====
2025-04-17 16:08:34 (38252): Guest Log: 2025-04-17 21:06:13,579 [wrapper] ==== wrapper stdout RESUME ====
2025-04-17 16:08:34 (38252): Guest Log: 2025-04-17 21:06:13,583 [wrapper] pilotpid: 6011
2025-04-17 16:08:34 (38252): Guest Log: 2025-04-17 21:06:13,587 [wrapper] Pilot exit status: 0
2025-04-17 16:08:34 (38252): Guest Log: 2025-04-17 21:06:13,744 [wrapper] pandaids: 6605315199
2025-04-17 16:08:34 (38252): Guest Log: 2025-04-17 21:06:13,777 [wrapper] cleanup supervisor_pilot 31590 6012
2025-04-17 16:08:34 (38252): Guest Log: 2025-04-17 21:06:13,781 [wrapper] Test setup, not cleaning
2025-04-17 16:08:34 (38252): Guest Log: 2025-04-17 21:06:13,785 [wrapper] apfmon messages muted
2025-04-17 16:08:34 (38252): Guest Log: 2025-04-17 21:06:13,788 [wrapper] ==== wrapper stdout END ====
2025-04-17 16:08:34 (38252): Guest Log: 2025-04-17 21:06:13,792 [wrapper] ==== wrapper stderr END ====
2025-04-17 16:08:34 (38252): Guest Log:  *** Error codes and diagnostics ***
2025-04-17 16:08:34 (38252): Guest Log:     "exeErrorCode": 0,
2025-04-17 16:08:34 (38252): Guest Log:     "exeErrorDiag": "",
2025-04-17 16:08:34 (38252): Guest Log:     "pilotErrorCode": 0,
2025-04-17 16:08:34 (38252): Guest Log:     "pilotErrorDiag": "",
2025-04-17 16:08:34 (38252): Guest Log:  *** Listing of results directory ***
2025-04-17 16:08:34 (38252): Guest Log: total 192292
2025-04-17 16:08:34 (38252): Guest Log: -rw-r--r--. 1 atlas atlas    495897 Apr 17 11:57 pilot3.tar.gz
2025-04-17 16:08:34 (38252): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Apr 17 12:05 queuedata.json
2025-04-17 16:08:34 (38252): Guest Log: -rwx------. 1 atlas atlas     37140 Apr 17 12:05 runpilot2-wrapper.sh
2025-04-17 16:08:34 (38252): Guest Log: -rwxr-xr-x. 1 atlas atlas     12044 Apr 17 19:50 init_data.xml
2025-04-17 16:08:34 (38252): Guest Log: -rwxr-xr-x. 1 atlas atlas    508891 Apr 17 19:50 input.tar.gz
2025-04-17 16:08:34 (38252): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 Apr 17 19:50 start_atlas.sh
2025-04-17 16:08:34 (38252): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr 17 19:50 EVNT.44075481._002160.pool.root.1 -> /data/./ATLAS.root_0
2025-04-17 16:08:34 (38252): Guest Log: -rw-r--r--. 1 atlas atlas      2579 Apr 17 19:51 pandaJob.out
2025-04-17 16:08:34 (38252): Guest Log: -rw-------. 1 atlas atlas       424 Apr 17 19:51 setup.sh.local
2025-04-17 16:08:34 (38252): Guest Log: -rw-------. 1 atlas atlas    990274 Apr 17 19:51 agis_schedconf.cvmfs.json
2025-04-17 16:08:34 (38252): Guest Log: -rw-------. 1 atlas atlas   1618536 Apr 17 19:51 agis_ddmendpoints.agis.ALL.json
2025-04-17 16:08:34 (38252): Guest Log: drwx------. 4 atlas atlas      4096 Apr 17 19:51 pilot3
2025-04-17 16:08:34 (38252): Guest Log: -rw-------. 1 atlas atlas        95 Apr 17 21:05 pilot_heartbeat.json
2025-04-17 16:08:34 (38252): Guest Log: -rw-------. 1 atlas atlas 191720303 Apr 17 21:05 HITS.44075483._055524.pool.root.1
2025-04-17 16:08:34 (38252): Guest Log: -rw-------. 1 atlas atlas      1029 Apr 17 21:05 memory_monitor_summary.json
2025-04-17 16:08:34 (38252): Guest Log: -rw-------. 1 atlas atlas    305114 Apr 17 21:05 log.44075483._055524.job.log.tgz.1
2025-04-17 16:08:34 (38252): Guest Log: -rw-------. 1 atlas atlas      7722 Apr 17 21:05 heartbeat.json
2025-04-17 16:08:34 (38252): Guest Log: -rw-------. 1 atlas atlas      4608 Apr 17 21:06 pilotlog.txt
2025-04-17 16:08:34 (38252): Guest Log: -rw-------. 1 atlas atlas    390461 Apr 17 21:06 log.44075483._055524.job.log.1
2025-04-17 16:08:34 (38252): Guest Log: -rw-------. 1 atlas atlas       357 Apr 17 21:06 output.list
2025-04-17 16:08:34 (38252): Guest Log: -rw-r--r--. 1 atlas atlas       620 Apr 17 21:06 runtime_log
2025-04-17 16:08:34 (38252): Guest Log: -rw-------. 1 atlas atlas    716800 Apr 17 21:06 result.tar.gz
2025-04-17 16:08:34 (38252): Guest Log: -rw-r--r--. 1 atlas atlas     10959 Apr 17 21:06 runtime_log.err
2025-04-17 16:08:34 (38252): Guest Log: -rw-------. 1 atlas atlas       660 Apr 17 21:06 Kr0KDm6AdP7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmrw3KDmp6uI9m.diag
2025-04-17 16:08:34 (38252): Guest Log: Looking for outputfile HITS.44075483._055524.pool.root.1
2025-04-17 16:08:34 (38252): Guest Log: HITS file was successfully produced
2025-04-17 16:08:34 (38252): Guest Log: -rw-------. 1 atlas atlas 191720303 Apr 17 21:05 /home/atlas/RunAtlas/HITS.44075483._055524.pool.root.1
2025-04-17 16:08:35 (38252): Guest Log: Successfully finished the ATLAS job!
2025-04-17 16:08:35 (38252): Guest Log: Copying the results back to the shared directory!
2025-04-17 16:08:35 (38252): Guest Log:  *** Contents of shared directory: ***
2025-04-17 16:08:35 (38252): Guest Log: total 407272
2025-04-17 16:08:35 (38252): Guest Log: -rwxrwxrwx. 1 root root 224062703 Apr 17 19:50 ATLAS.root_0
2025-04-17 16:08:35 (38252): Guest Log: -rwxrwxrwx. 1 root root 191720303 Apr 17  2025 HITS.pool.root.1
2025-04-17 16:08:35 (38252): Guest Log: -rwxrwxrwx. 1 root root     12044 Apr 17 19:50 init_data.xml
2025-04-17 16:08:35 (38252): Guest Log: -rwxrwxrwx. 1 root root    508891 Apr 17 15:31 input.tar.gz
2025-04-17 16:08:35 (38252): Guest Log: -rwxrwxrwx. 1 root root    716800 Apr 17  2025 result.tar.gz
2025-04-17 16:08:35 (38252): Guest Log: -rwxrwxrwx. 1 root root     17569 Apr 17 15:31 start_atlas.sh
2025-04-17 16:08:35 (38252): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-17 16:08:35 (38252): VM Completion File Detected.
2025-04-17 16:08:35 (38252): Powering off VM.
2025-04-17 16:08:35 (38252): Successfully stopped VM.
2025-04-17 16:08:36 (38252): Deregistering VM. (boinc_b2958e32905c5b8b, slot#12)
2025-04-17 16:08:36 (38252): Removing network bandwidth throttle group from VM.
2025-04-17 16:08:36 (38252): Removing VM from VirtualBox.
16:08:42 (38252): called boinc_finish(0)

</stderr_txt>
]]>

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